ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl20e12 |
|---|---|
| Clone Library Name | barley_pub |
>METE_BIFLO (Q8G651) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 767 Score = 28.9 bits (63), Expect = 3.0 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -1 Query: 231 HEAEVELEASGAVVDGHRPRTPSE 160 H+A E EA V D H PR PSE Sbjct: 689 HDAHFETEAGPGVYDIHSPRIPSE 712
>GUAA_PHOLL (Q7N3K4) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 525 Score = 28.9 bits (63), Expect = 3.0 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 94 HELLAASGGGDVRVTLYEQEESLGGRARTVAVDDGAGRL 210 H +L SGG D VT ++G R V VD+G RL Sbjct: 229 HVILGLSGGVDSSVTALLLHRAIGNRLTCVFVDNGLLRL 267
>PPOX_MYCLE (Q50008) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)| Length = 451 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 103 LAASGGGDVRVTLYEQEESLGGRARTVAVDDGAGRLQLDLGFMSF 237 L + G DV +TL++ + LGG RT V G +DLG +F Sbjct: 22 LRVATGDDVAITLFDPGDRLGGVLRTECV----GGQPMDLGAEAF 62
>GAK_HUMAN (O14976) Cyclin G-associated kinase (EC 2.7.11.1)| Length = 1311 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/72 (22%), Positives = 33/72 (45%) Frame = +1 Query: 121 GDVRVTLYEQEESLGGRARTVAVDDGAGRLQLDLGFMSFNQVTYPHMMERLEGLGVEMER 300 GDV + +Y +LGGR + ++Q GF+ N T L+ ++ + Sbjct: 638 GDVLIVIYHARSTLGGRLQAKMASMKMFQIQFHTGFVPRNATTVKFAKYDLDACDIQEKY 697 Query: 301 SNMSFSVSTQLK 336 ++ F V+ +++ Sbjct: 698 PDL-FQVNLEVE 708
>GUAA_YERPS (Q668A8) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 525 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 94 HELLAASGGGDVRVTLYEQEESLGGRARTVAVDDGAGRL 210 H +L SGG D VT ++G R V VD+G RL Sbjct: 229 HVILGLSGGVDSSVTAMLLHRAIGKRLTCVFVDNGLLRL 267
>GUAA_YERPE (Q8ZCU4) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 525 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 94 HELLAASGGGDVRVTLYEQEESLGGRARTVAVDDGAGRL 210 H +L SGG D VT ++G R V VD+G RL Sbjct: 229 HVILGLSGGVDSSVTAMLLHRAIGKRLTCVFVDNGLLRL 267
>NADO_THEBR (P32382) NADH oxidase (EC 1.-.-.-)| Length = 651 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/68 (25%), Positives = 30/68 (44%) Frame = +1 Query: 10 REGVYQAHRQGRMRXXXXXXXXXXXXXXHELLAASGGGDVRVTLYEQEESLGGRARTVAV 189 REGVY +Q ++ + AA G +V LYE+++ LGG+ + Sbjct: 372 REGVYSEIKQAPVKKKVVVVGGGPAGMQAAITAAKRGH--QVILYEKKQHLGGQLEIASA 429 Query: 190 DDGAGRLQ 213 G +++ Sbjct: 430 SPGKAKIK 437
>R1A4_SOLDE (Q6L439) Putative late blight resistance protein homolog R1A-4| Length = 1096 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -3 Query: 403 WFFVPGDLRYRCHFPTHILHRRLSIVCSLRKTCSISP 293 WFFVPG ++ + L VC + CSI P Sbjct: 94 WFFVPGHMKEQIEQVLKELKLLRFFVCFVSNKCSIQP 130
>PPOX_MYCTU (P0A5A7) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)| Length = 452 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/57 (35%), Positives = 28/57 (49%) Frame = +1 Query: 118 GGDVRVTLYEQEESLGGRARTVAVDDGAGRLQLDLGFMSFNQVTYPHMMERLEGLGV 288 G D +TL+E + LGG RT + G +DLG +F + P M L LG+ Sbjct: 27 GDDATITLFEPADRLGGVLRT----EHIGGQPMDLGAEAF-VLRRPEMPALLAELGL 78
>PPOX_MYCBO (P0A5A8) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)| Length = 452 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/57 (35%), Positives = 28/57 (49%) Frame = +1 Query: 118 GGDVRVTLYEQEESLGGRARTVAVDDGAGRLQLDLGFMSFNQVTYPHMMERLEGLGV 288 G D +TL+E + LGG RT + G +DLG +F + P M L LG+ Sbjct: 27 GDDATITLFEPADRLGGVLRT----EHIGGQPMDLGAEAF-VLRRPEMPALLAELGL 78
>ASSY_STRAW (Q827Z1) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 404 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = +1 Query: 100 LLAASGGGDVRVTLYEQEESLGGRARTVAVDDGAGRLQLDL 222 +LA SGG D V + E G VAVD G G LD+ Sbjct: 13 VLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQGGEDLDV 53
>ASSY_STRCL (P50986) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 397 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = +1 Query: 100 LLAASGGGDVRVTLYEQEESLGGRARTVAVDDGAGRLQLDL 222 +LA SGG D V + E G VAVD G G LD+ Sbjct: 6 VLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQGGEDLDV 46
>DNAJ_SILPO (Q5LWJ5) Chaperone protein dnaJ| Length = 381 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = +1 Query: 94 HELLAASGGG-DVRVTLYEQEESLGGRARTVAVDDGAGRLQLDLGFMSFNQV 246 HEL G RV + + +LGG +D G GR+Q+ G S Q+ Sbjct: 262 HELFERDGVNLYCRVPVSMAKAALGGAIEVPTIDGGRGRVQVPAGSQSGRQM 313
>GAK_MOUSE (Q99KY4) Cyclin G-associated kinase (EC 2.7.11.1)| Length = 1305 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/72 (22%), Positives = 33/72 (45%) Frame = +1 Query: 121 GDVRVTLYEQEESLGGRARTVAVDDGAGRLQLDLGFMSFNQVTYPHMMERLEGLGVEMER 300 GDV + +Y +LGGR + ++Q GF+ N T L+ ++ + Sbjct: 636 GDVLIIIYHARATLGGRLQAKMASMKMFQIQFHTGFVPRNATTVKFAKYDLDACDIQEKY 695 Query: 301 SNMSFSVSTQLK 336 ++ F V+ +++ Sbjct: 696 PDL-FQVNLEVE 706 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.135 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,262,402 Number of Sequences: 219361 Number of extensions: 715086 Number of successful extensions: 2606 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2579 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2605 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
