ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl20e06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469360.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3534 Score = 123 bits (62), Expect = 5e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 291 aggcttcaggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaag 350 ||||| ||||| |||||| |||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 133 aggctccaggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaag 192 Query: 351 aaggctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcag 410 || |||| ||| ||||| || || || |||||||||||||| || || ||| ||||||| Sbjct: 193 aaagctgtggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcag 252 Query: 411 aagaaatcgcttgcacctcaaatggc 436 ||||||| |||||| |||||||||| Sbjct: 253 aagaaatttcttgcatctcaaatggc 278
>dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F18, full insert sequence Length = 3587 Score = 123 bits (62), Expect = 5e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 291 aggcttcaggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaag 350 ||||| ||||| |||||| |||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 346 aggctccaggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaag 405 Query: 351 aaggctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcag 410 || |||| ||| ||||| || || || |||||||||||||| || || ||| ||||||| Sbjct: 406 aaagctgtggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcag 465 Query: 411 aagaaatcgcttgcacctcaaatggc 436 ||||||| |||||| |||||||||| Sbjct: 466 aagaaatttcttgcatctcaaatggc 491
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 117 bits (59), Expect = 3e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 298 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 357 |||| |||||| |||| ||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 27536308 aggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaagaaagctg 27536367 Query: 358 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 417 ||| ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 27536368 tggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 27536427 Query: 418 cgcttgcacctcaaatggc 436 |||||| |||||||||| Sbjct: 27536428 ttcttgcatctcaaatggc 27536446 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 298 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 357 |||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||||| |||| Sbjct: 645973 aggcacaagcagcttcagatggtcctaaaaaaagtgagaagaagcaaaggaagaaagctg 646032 Query: 358 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 417 || ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 646033 ttgaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 646092 Query: 418 cgcttgcacctcaaatggc 436 |||||| |||||||||| Sbjct: 646093 ttcttgcatctcaaatggc 646111 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 354 gctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaag 413 |||| ||| |||||||| || |||||||| ||||||| || || |||| |||||||||| Sbjct: 12403432 gctgtggaggatgaaaatcctgaagattttattgatcaagacactcctaatgggcagaag 12403373 Query: 414 aaatcgcttgcacctcaaatggc 436 ||| |||||||||||||||||| Sbjct: 12403372 aaactgcttgcacctcaaatggc 12403350 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 aagcaacttctgatggacct 323 |||||||||||||||||||| Sbjct: 15306711 aagcaacttctgatggacct 15306692 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 agtgagaagaagcaaaagaagaag 353 |||||||||||| ||||||||||| Sbjct: 14385631 agtgagaagaagaaaaagaagaag 14385654
>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete sequence Length = 27470 Score = 117 bits (59), Expect = 3e-23 Identities = 119/139 (85%) Strand = Plus / Minus Query: 298 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 357 |||| |||||| |||| ||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 26466 aggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaagaaagctg 26407 Query: 358 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 417 ||| ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 26406 tggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 26347 Query: 418 cgcttgcacctcaaatggc 436 |||||| |||||||||| Sbjct: 26346 ttcttgcatctcaaatggc 26328
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 117 bits (59), Expect = 3e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 298 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 357 |||| |||||| |||| ||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 27627631 aggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaagaaagctg 27627690 Query: 358 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 417 ||| ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 27627691 tggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 27627750 Query: 418 cgcttgcacctcaaatggc 436 |||||| |||||||||| Sbjct: 27627751 ttcttgcatctcaaatggc 27627769 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 298 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 357 |||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||||| |||| Sbjct: 645971 aggcacaagcagcttcagatggtcctaaaaaaagtgagaagaagcaaaggaagaaagctg 646030 Query: 358 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 417 || ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 646031 ttgaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 646090 Query: 418 cgcttgcacctcaaatggc 436 |||||| |||||||||| Sbjct: 646091 ttcttgcatctcaaatggc 646109 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 354 gctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaag 413 |||| ||| |||||||| || |||||||| ||||||| || || |||| |||||||||| Sbjct: 12400195 gctgtggaggatgaaaatcctgaagattttattgatcaagacactcctaatgggcagaag 12400136 Query: 414 aaatcgcttgcacctcaaatggc 436 ||| |||||||||||||||||| Sbjct: 12400135 aaactgcttgcacctcaaatggc 12400113 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 aagcaacttctgatggacct 323 |||||||||||||||||||| Sbjct: 15301245 aagcaacttctgatggacct 15301226 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 agtgagaagaagcaaaagaagaag 353 |||||||||||| ||||||||||| Sbjct: 14380606 agtgagaagaagaaaaagaagaag 14380629
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 117 bits (59), Expect = 3e-23 Identities = 119/139 (85%) Strand = Plus / Minus Query: 298 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 357 |||| |||||| |||| ||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 14206 aggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaagaaagctg 14147 Query: 358 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 417 ||| ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 14146 tggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 14087 Query: 418 cgcttgcacctcaaatggc 436 |||||| |||||||||| Sbjct: 14086 ttcttgcatctcaaatggc 14068
>dbj|AK066973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089D01, full insert sequence Length = 4411 Score = 107 bits (54), Expect = 3e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 291 aggcttcaggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaag 350 ||||| ||||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||| Sbjct: 1240 aggctccaggcacaagcagcttcagatggtcctaaaaaaagtgagaagaagcaaaggaag 1299 Query: 351 aaggctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcag 410 || |||| || ||||| || || || |||||||||||||| || || ||| ||||||| Sbjct: 1300 aaagctgttgaggatgagaatcctgaggatttcattgatccagacactcctcatgggcag 1359 Query: 411 aagaaatcgcttgcacctcaaatggc 436 ||||||| |||||| |||||||||| Sbjct: 1360 aagaaatttcttgcatctcaaatggc 1385
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Plus Query: 298 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 357 |||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||||| |||| Sbjct: 31854 aggcacaagcagcttcagatggtcctaaaaaaagtgagaagaagcaaaggaagaaagctg 31913 Query: 358 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 417 || ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 31914 ttgaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 31973 Query: 418 cgcttgcacctcaaatggc 436 |||||| |||||||||| Sbjct: 31974 ttcttgcatctcaaatggc 31992
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 354 gctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaag 413 |||| ||| |||||||| || |||||||| ||||||| || || |||| |||||||||| Sbjct: 62450 gctgtggaggatgaaaatcctgaagattttattgatcaagacactcctaatgggcagaag 62391 Query: 414 aaatcgcttgcacctcaaatggc 436 ||| |||||||||||||||||| Sbjct: 62390 aaactgcttgcacctcaaatggc 62368
>dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099P08, full insert sequence Length = 3639 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 354 gctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaag 413 |||| ||| |||||||| || |||||||| ||||||| || || |||| |||||||||| Sbjct: 655 gctgtggaggatgaaaatcctgaagattttattgatcaagacactcctaatgggcagaag 714 Query: 414 aaatcgcttgcacctcaaatggc 436 ||| |||||||||||||||||| Sbjct: 715 aaactgcttgcacctcaaatggc 737
>gb|AC025471.6| Homo sapiens chromosome 5 clone RP11-138C1, complete sequence Length = 148607 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 323 taagaaaagtgagaagaagcaaaagaaga 351 ||||||||| ||||||||||||||||||| Sbjct: 117891 taagaaaagggagaagaagcaaaagaaga 117863
>ref|XM_322778.1| Neurospora crassa OR74A predicted protein (NCU03521.1) partial mRNA Length = 174 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 331 gtgagaagaagcaaaagaagaag 353 ||||||||||||||||||||||| Sbjct: 128 gtgagaagaagcaaaagaagaag 150
>ref|XM_951707.1| Neurospora crassa OR74A hypothetical protein (NCU03521.1) partial mRNA Length = 174 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 331 gtgagaagaagcaaaagaagaag 353 ||||||||||||||||||||||| Sbjct: 128 gtgagaagaagcaaaagaagaag 150
>emb|AL442043.1|NCB11E6 Neurospora crassa DNA linkage group II BAC clone B11E6 Length = 69943 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 331 gtgagaagaagcaaaagaagaag 353 ||||||||||||||||||||||| Sbjct: 16990 gtgagaagaagcaaaagaagaag 17012
>emb|AL390092.1|NCB2A19 Neurospora crassa DNA linkage group II BAC clone B2A19 Length = 72788 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 331 gtgagaagaagcaaaagaagaag 353 ||||||||||||||||||||||| Sbjct: 67500 gtgagaagaagcaaaagaagaag 67522
>ref|XM_420603.1| PREDICTED: Gallus gallus similar to sodium bicarbonate cotransporter (LOC422649), mRNA Length = 4408 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 ggagaaggcggcgtcagaggagaag 179 |||||||||||||||| |||||||| Sbjct: 120 ggagaaggcggcgtcataggagaag 144
>ref|XM_648481.1| Entamoeba histolytica HM-1:IMSS glutamate synthase small subunit (78.t00007) partial mRNA Length = 1338 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaagg 354 ||||||||||||||||||||| Sbjct: 921 agaagaagcaaaagaagaagg 941
>ref|XM_652212.1| Entamoeba histolytica HM-1:IMSS glutamate synthase small subunit (3.t00052) partial mRNA Length = 1293 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaagg 354 ||||||||||||||||||||| Sbjct: 876 agaagaagcaaaagaagaagg 896
>gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, complete sequence Length = 211296 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 324 aagaaaagtgagaagaagcaaaagaagaa 352 |||||||| |||| ||||||||||||||| Sbjct: 122612 aagaaaagagagatgaagcaaaagaagaa 122640
>gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, complete sequence Length = 319367 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 324 aagaaaagtgagaagaagcaaaagaagaa 352 |||||||| |||| ||||||||||||||| Sbjct: 213820 aagaaaagagagatgaagcaaaagaagaa 213848
>emb|AL354856.9| Human DNA sequence from clone RP11-290P3 on chromosome 6, complete sequence Length = 113146 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 323 taagaaaagtgagaagaagcaaaag 347 |||||||||||||||||| |||||| Sbjct: 33678 taagaaaagtgagaagaaacaaaag 33654
>gb|AC069419.20| Homo sapiens 3 BAC RP11-11D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 61415 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 tgtcagggacactctgctctc 49 ||||||||||||||||||||| Sbjct: 55239 tgtcagggacactctgctctc 55219
>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence Length = 193176 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 tctctcaccatggagaagccc 140 ||||||||||||||||||||| Sbjct: 177775 tctctcaccatggagaagccc 177755
>emb|BX323033.6| Zebrafish DNA sequence from clone DKEYP-63D11, complete sequence Length = 171058 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 gaagaagcaaaagaagaaggc 355 ||||||||||||||||||||| Sbjct: 145157 gaagaagcaaaagaagaaggc 145137
>emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 in linkage group 2, complete sequence Length = 173663 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gagaagaagcaaaagaagaag 353 ||||||||||||||||||||| Sbjct: 95728 gagaagaagcaaaagaagaag 95748
>gb|AY122165.1| Drosophila melanogaster LD24232 full insert cDNA Length = 2283 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gagaagaagcaaaagaagaag 353 ||||||||||||||||||||| Sbjct: 1582 gagaagaagcaaaagaagaag 1602
>gb|AF380344.1|AF380343S2 Homo sapiens pontin 52 (RUVBL1) gene, exons 2 through 11, and complete cds Length = 40881 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 tgtcagggacactctgctctc 49 ||||||||||||||||||||| Sbjct: 36705 tgtcagggacactctgctctc 36685
>ref|NM_133088.1| Drosophila melanogaster Ing3 CG6632-RA (Ing3), mRNA Length = 2298 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gagaagaagcaaaagaagaag 353 ||||||||||||||||||||| Sbjct: 1620 gagaagaagcaaaagaagaag 1640
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaagg 354 ||||||||||||||||||||| Sbjct: 1101615 agaagaagcaaaagaagaagg 1101635
>gb|AC008936.6| Homo sapiens chromosome 5 clone CTD-2309I16, complete sequence Length = 56515 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 tctgatggacctaagaaaagt 332 ||||||||||||||||||||| Sbjct: 41453 tctgatggacctaagaaaagt 41473
>gb|AC154748.2| Mus musculus BAC clone RP23-116P6 from chromosome 13, complete sequence Length = 203908 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 tctctcaccatggagaagccc 140 ||||||||||||||||||||| Sbjct: 193131 tctctcaccatggagaagccc 193151
>gb|AC026461.11| Homo sapiens chromosome 16 clone RP11-249C24, complete sequence Length = 168392 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 325 agaaaagtgagaagaagcaaaagaagaag 353 ||||||| ||||||||| ||||||||||| Sbjct: 133698 agaaaagggagaagaaggaaaagaagaag 133670
>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone BACR17H16, complete sequence Length = 182080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 gagaagaagcaaaagaagaag 353 ||||||||||||||||||||| Sbjct: 144022 gagaagaagcaaaagaagaag 144002
>gb|AE004522.1| Pseudomonas aeruginosa PAO1, section 83 of 529 of the complete genome Length = 15724 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 73 aagcgccggcgcgcggccccggcggcgcg 101 ||||||||||||||||| |||||||||| Sbjct: 14294 aagcgccggcgcgcggcggcggcggcgcg 14266
>gb|AC009155.3|AC009155 Homo sapiens chromosome 16 clone RP11-5A3, complete sequence Length = 143860 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 325 agaaaagtgagaagaagcaaaagaagaag 353 ||||||| ||||||||| ||||||||||| Sbjct: 91285 agaaaagggagaagaaggaaaagaagaag 91313
>emb|BX647488.1|HSM807634 Homo sapiens mRNA; cDNA DKFZp686C14128 (from clone DKFZp686C14128) Length = 4094 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 tgtcagggacactctgctctc 49 ||||||||||||||||||||| Sbjct: 446 tgtcagggacactctgctctc 426
>gb|AC006670.1| Caenorhabditis elegans cosmid K07A3, complete sequence Length = 36454 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 329 aagtgagaagaagcaaaagaagaag 353 ||||||||||||| ||||||||||| Sbjct: 29019 aagtgagaagaagaaaaagaagaag 28995
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 gagaagaagcaaaagaagaag 353 ||||||||||||||||||||| Sbjct: 208446 gagaagaagcaaaagaagaag 208426
>emb|BX284666.7| Zebrafish DNA sequence from clone CH211-190K17 in linkage group 22, complete sequence Length = 139272 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 gagaagaagcaaaagaagaag 353 ||||||||||||||||||||| Sbjct: 60233 gagaagaagcaaaagaagaag 60213
>gb|BC068350.1| Danio rerio SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:85661 IMAGE:6960084), complete cds Length = 2317 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 gaagaagcaaaagaagaaggc 355 ||||||||||||||||||||| Sbjct: 842 gaagaagcaaaagaagaaggc 862
>gb|BC046876.1| Danio rerio SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:55489 IMAGE:2640661), complete cds Length = 2306 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 gaagaagcaaaagaagaaggc 355 ||||||||||||||||||||| Sbjct: 858 gaagaagcaaaagaagaaggc 878
>ref|NM_214714.1| Danio rerio SERPINE1 mRNA binding protein 1 (serbp1), mRNA Length = 2317 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 gaagaagcaaaagaagaaggc 355 ||||||||||||||||||||| Sbjct: 842 gaagaagcaaaagaagaaggc 862
>gb|AC154043.1| Drosophila melanogaster clone BACR39O11, complete sequence Length = 182468 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 2720 agaagaagcaaaagaagaag 2701
>gb|AC154041.1| Drosophila melanogaster clone BACR43N11, complete sequence Length = 157286 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 8507 agaagaagcaaaagaagaag 8526
>ref|NM_188119.1| Oryza sativa (japonica cultivar-group), Ozsa8551 predicted mRNA Length = 2388 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cggcgcgcggccccggcggc 98 |||||||||||||||||||| Sbjct: 1541 cggcgcgcggccccggcggc 1560
>ref|NM_184594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1776 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 agtgagaagaagcaaaagaagaag 353 |||||||||||| ||||||||||| Sbjct: 1654 agtgagaagaagaaaaagaagaag 1677
>gb|U80022.2| Caenorhabditis elegans cosmid F12F3, complete sequence Length = 36859 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 13827 agaagaagcaaaagaagaag 13808
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 aagcaacttctgatggacct 323 |||||||||||||||||||| Sbjct: 30637 aagcaacttctgatggacct 30656
>gb|BC058111.1| Mus musculus zinc fingers and homeoboxes 3, mRNA (cDNA clone MGC:67301 IMAGE:6836697), complete cds Length = 4499 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctgtcagggacactctgctc 47 |||||||||||||||||||| Sbjct: 929 ctgtcagggacactctgctc 910
>gb|AY576796.1| Actinoplanes phage phiAsp2, complete genome Length = 58638 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gcggccccggcggcgcgacc 104 |||||||||||||||||||| Sbjct: 9817 gcggccccggcggcgcgacc 9836
>ref|NM_177263.3| Mus musculus zinc fingers and homeoboxes 3 (Zhx3), mRNA Length = 4499 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctgtcagggacactctgctc 47 |||||||||||||||||||| Sbjct: 929 ctgtcagggacactctgctc 910
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcgcgcggccccggcggcgc 100 |||||||||||||||||||| Sbjct: 48421 gcgcgcggccccggcggcgc 48440
>gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, complete sequence Length = 182677 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cggcgcgcggccccggcggc 98 |||||||||||||||||||| Sbjct: 10351 cggcgcgcggccccggcggc 10332
>gb|AC102589.9| Mus musculus chromosome 8, clone RP23-334O19, complete sequence Length = 234829 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 aagaagcaaaagaagaaggc 355 |||||||||||||||||||| Sbjct: 210976 aagaagcaaaagaagaaggc 210995
>gb|M98552.2| Caenorhabditis elegans cosmid ZK370, complete sequence Length = 38725 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 gagaagaagcaaaagaagaaggct 356 ||||||||||| |||||||||||| Sbjct: 25828 gagaagaagcagaagaagaaggct 25805
>ref|XM_754826.1| Ustilago maydis 521 hypothetical protein (UM03772.1) partial mRNA Length = 1662 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 aagctgcttgacgacaagga 196 |||||||||||||||||||| Sbjct: 1393 aagctgcttgacgacaagga 1412
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcgcgcggccccggcggcgc 100 |||||||||||||||||||| Sbjct: 132301 gcgcgcggccccggcggcgc 132320 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcgcgcggccccggcggcgc 100 |||||||||||||||||||| Sbjct: 105917 gcgcgcggccccggcggcgc 105898
>ref|XM_380515.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00339.1) partial mRNA Length = 2079 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 tgagaagaagcaaaagaaga 351 |||||||||||||||||||| Sbjct: 1503 tgagaagaagcaaaagaaga 1522
>gb|AC130838.3| Mus musculus BAC clone RP24-369B4 from chromosome 12, complete sequence Length = 149814 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 133421 agaagaagcaaaagaagaag 133440
>gb|AC146539.2| Gasterosteus aculeatus clone CH213-129C17, complete sequence Length = 202686 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 73837 agaagaagcaaaagaagaag 73856
>ref|XM_720753.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00631) partial mRNA Length = 555 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 420 agaagaagcaaaagaagaag 439 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 408 agaagaagcaaaagaagaag 427 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 396 agaagaagcaaaagaagaag 415
>gb|AC164313.3| Mus musculus BAC clone RP23-24F12 from chromosome 3, complete sequence Length = 196368 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 182520 agaagaagcaaaagaagaag 182539
>gb|AC146690.1| Gasterosteus aculeatus clone CH213-156J22, complete sequence Length = 166930 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 44512 agaagaagcaaaagaagaag 44531
>ref|XM_499639.1| Yarrowia lipolytica CLIB122, YALI0A01023g predicted mRNA Length = 3237 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 tgagaagaagcaaaagaagaaggc 355 |||||||||||| ||||||||||| Sbjct: 3114 tgagaagaagcagaagaagaaggc 3137
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gcggccccggcggcgcgacc 104 |||||||||||||||||||| Sbjct: 90997 gcggccccggcggcgcgacc 91016
>emb|AL161450.14| Human DNA sequence from clone RP11-39K24 on chromosome 9 Contains the 3' end of the JAK2 gene for Janus kinase 2 (a protein tyrosine kinase), a casein kinase pseudogene, a trans-prenyltransferase (TPT) pseudogene, a NADH dehydrogenase 6 (MTND6) pseuodgene, a NADH dehydrogenase 1 (MTND1) pseudogene, a cytochrome c oxidase I (MTCO1) pseudogene, a cytochrome c oxidase II (MTCO2) pseudogene, an ATP synthase 6 (MTATP6) pseudogene, a cytochrome c oxidase III (MTCO3) pseudogene, a NADH dehydrogenase 4 (MTND4)pseudogene, a pseudogene similar to part of NADH dehydrogenase 5 (MTND5), a transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) (TCF3) pseudogene, an immunoglobulin heavy constant epsilon pseudogene 2 (IGHEP2), a novel gene, the INSL6 gene for insulin-like 6 (RIF1) and 4 CpG islands, complete sequence Length = 171146 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cggcgcgcggccccggcggc 98 |||||||||||||||||||| Sbjct: 67411 cggcgcgcggccccggcggc 67430
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ggccccggcggcgcgaccac 106 |||||||||||||||||||| Sbjct: 138762 ggccccggcggcgcgaccac 138743
>gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome 14, complete sequence Length = 230502 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 161974 agaagaagcaaaagaagaag 161993
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 230943 agaagaagcaaaagaagaag 230962
>gb|AC141561.5| Mus musculus BAC clone RP23-457C15 from chromosome 3, complete sequence Length = 169547 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 138126 agaagaagcaaaagaagaag 138145
>emb|AL935056.18| Mouse DNA sequence from clone RP23-185F7 on chromosome 2, complete sequence Length = 146086 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 325 agaaaagtgagaagaagcaaaagaagaa 352 ||||||||||||| ||||||||| |||| Sbjct: 3509 agaaaagtgagaaaaagcaaaaggagaa 3536
>gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, complete sequence Length = 198295 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gacaaggagctagagctaga 208 |||||||||||||||||||| Sbjct: 124623 gacaaggagctagagctaga 124642
>gb|AC004411.3| Arabidopsis thaliana chromosome 2 clone F14M4 map CIC06C03, complete sequence Length = 106329 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 81803 agaagaagcaaaagaagaag 81784
>ref|NM_079201.2| Drosophila melanogaster mitochondrial ribosomal protein S6 CG15016-RA (mRpS6), mRNA Length = 627 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 526 agaagaagcaaaagaagaag 545
>dbj|AK143296.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230037F05 product:zinc fingers and homeoboxes 3, full insert sequence Length = 4462 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctgtcagggacactctgctc 47 |||||||||||||||||||| Sbjct: 910 ctgtcagggacactctgctc 891
>dbj|AK147259.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1003G16 product:zinc fingers and homeoboxes 3, full insert sequence Length = 9067 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctgtcagggacactctgctc 47 |||||||||||||||||||| Sbjct: 751 ctgtcagggacactctgctc 732
>gb|AY070674.1| Drosophila melanogaster RH10862 full length cDNA Length = 639 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 526 agaagaagcaaaagaagaag 545
>gb|AC099762.1| Caenorhabditis briggsae cosmid CB021D15, complete sequence Length = 98394 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 agtgagaagaagcaaaagaagaag 353 |||||||||||| ||||||||||| Sbjct: 29059 agtgagaagaaggaaaagaagaag 29082
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 agtgagaagaagcaaaagaagaag 353 |||||||||||| ||||||||||| Sbjct: 134860 agtgagaagaagaaaaagaagaag 134883
>dbj|AK029603.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930412E20 product:DJ511B24.3 (KIAA0395 (PROBABLE HOMEOBOX PROTEIN)) homolog [Homo sapiens], full insert sequence Length = 3352 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctgtcagggacactctgctc 47 |||||||||||||||||||| Sbjct: 801 ctgtcagggacactctgctc 782
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cgccggcgcgcggccccggc 95 |||||||||||||||||||| Sbjct: 714139 cgccggcgcgcggccccggc 714158
>dbj|AK030057.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932418O04 product:DJ511B24.3 (KIAA0395 (PROBABLE HOMEOBOX PROTEIN)) homolog [Homo sapiens], full insert sequence Length = 3611 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctgtcagggacactctgctc 47 |||||||||||||||||||| Sbjct: 894 ctgtcagggacactctgctc 875
>gb|AC153628.3| Mus musculus 6 BAC RP23-13B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219322 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 acctaagaaaagtgagaaga 339 |||||||||||||||||||| Sbjct: 125144 acctaagaaaagtgagaaga 125163
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cggcgcgcggccccggcggc 98 |||||||||||||||||||| Sbjct: 9864336 cggcgcgcggccccggcggc 9864355
>ref|XM_392112.2| PREDICTED: Apis mellifera similar to GA15443-PA (LOC408569), mRNA Length = 1372 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 318 agaagaagcaaaagaagaag 337
>emb|BX824082.1|CNS0A5IN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH20ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1637 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 1450 agaagaagcaaaagaagaag 1469
>gb|AC112710.4| Homo sapiens BAC clone RP13-620L6 from 4, complete sequence Length = 74521 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 caggcttcaggctcaagcaa 309 |||||||||||||||||||| Sbjct: 60614 caggcttcaggctcaagcaa 60595
>dbj|AB099703.2| Mus musculus ZHX3 gene for transcription factor ZHX3, complete cds Length = 13008 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctgtcagggacactctgctc 47 |||||||||||||||||||| Sbjct: 1998 ctgtcagggacactctgctc 1979
>gb|AC044787.6|AC044787 Homo sapiens chromosome 15 clone CTD-2270N23 map 15q21, complete sequence Length = 148147 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 atcctgagacccctagtggg 407 |||||||||||||||||||| Sbjct: 82670 atcctgagacccctagtggg 82689
>gb|AC104638.11| Homo sapiens 3 BAC RP11-689C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 34051 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gagaagaagcaaaagaagaa 352 |||||||||||||||||||| Sbjct: 9108 gagaagaagcaaaagaagaa 9127
>gb|AE000789.1| Borrelia burgdorferi B31 plasmid lp28-4, complete sequence Length = 27323 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 aagaagcaaaagaagaaggc 355 |||||||||||||||||||| Sbjct: 21408 aagaagcaaaagaagaaggc 21389
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gccccggcggcgcgaccacc 107 |||||||||||||||||||| Sbjct: 3240672 gccccggcggcgcgaccacc 3240691
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025D05 Length = 145684 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cggcgcgcggccccggcggc 98 |||||||||||||||||||| Sbjct: 128586 cggcgcgcggccccggcggc 128605
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cggcgcgcggccccggcggc 98 |||||||||||||||||||| Sbjct: 102 cggcgcgcggccccggcggc 121
>gb|AF229129.1|AF229129 Tahyna virus middle segment RNA ORF (M-RNA) mRNA, complete cds Length = 4491 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 gtgagaagaagcaaaagaag 350 |||||||||||||||||||| Sbjct: 1563 gtgagaagaagcaaaagaag 1582
>gb|AC010219.4|AC010219 Homo sapiens chromosome 5 clone CTC-251I16, complete sequence Length = 127922 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 gctgccaggcttcaggctca 304 |||||||||||||||||||| Sbjct: 60835 gctgccaggcttcaggctca 60854
>dbj|AB099527.2| Mus musculus mRNA for transcription factor ZHX3, complete cds Length = 2856 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctgtcagggacactctgctc 47 |||||||||||||||||||| Sbjct: 473 ctgtcagggacactctgctc 454
>dbj|AK103723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138C07, full insert sequence Length = 1987 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 agtgagaagaagcaaaagaagaag 353 |||||||||||| ||||||||||| Sbjct: 1733 agtgagaagaagaaaaagaagaag 1756
>dbj|AK063289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-E01, full insert sequence Length = 2185 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 agtgagaagaagcaaaagaagaag 353 |||||||||||| ||||||||||| Sbjct: 1732 agtgagaagaagaaaaagaagaag 1755
>emb|AL954652.3| Zebrafish DNA sequence from clone CH211-239O15 in linkage group 4, complete sequence Length = 152900 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 71972 agaagaagcaaaagaagaag 71991
>emb|Z71185.1|CEC35A5 Caenorhabditis elegans Cosmid C35A5, complete sequence Length = 42031 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 29397 agaagaagcaaaagaagaag 29416
>gb|AF123485.1|AF123485 Tahyna virus polyprotein mRNA, complete cds Length = 4490 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 gtgagaagaagcaaaagaag 350 |||||||||||||||||||| Sbjct: 1563 gtgagaagaagcaaaagaag 1582
>gb|AE003481.3| Drosophila melanogaster chromosome 3L, section 15 of 83 of the complete sequence Length = 315988 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 56462 agaagaagcaaaagaagaag 56481
>dbj|AP000478.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-14E22, complete sequence Length = 121689 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 aggagctagagctagagcgggagc 216 |||||||||||||||||| ||||| Sbjct: 48973 aggagctagagctagagcaggagc 48996
>dbj|AP001978.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-258O13, complete sequence Length = 161602 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 aggagctagagctagagcgggagc 216 |||||||||||||||||| ||||| Sbjct: 153278 aggagctagagctagagcaggagc 153301
>gb|AC102211.23| Mus musculus chromosome 3, clone RP24-369F14, complete sequence Length = 142790 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 114701 agaagaagcaaaagaagaag 114682
>gb|DQ317973.1| Mus musculus zinc fingers and homeoboxes 3 (Zhx3) mRNA, complete cds Length = 2856 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctgtcagggacactctgctc 47 |||||||||||||||||||| Sbjct: 473 ctgtcagggacactctgctc 454
>emb|Z81140.1|CEW10G6 Caenorhabditis elegans Cosmid W10G6, complete sequence Length = 26271 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 13640 agaagaagcaaaagaagaag 13659
>gb|AC139294.4| Mus musculus BAC clone RP24-239E14 from 14, complete sequence Length = 183363 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 44571 agaagaagcaaaagaagaag 44590
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 tgagaagaagcaaaagaagaaggc 355 |||||||||||| ||||||||||| Sbjct: 140053 tgagaagaagcagaagaagaaggc 140076
>gb|AC147360.5| Mus musculus BAC clone RP24-241D11 from chromosome 12, complete sequence Length = 160968 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 140094 agaagaagcaaaagaagaag 140075
>emb|AL844871.11| Mouse DNA sequence from clone RP23-271B15 on chromosome 2, complete sequence Length = 179754 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 aaagtgagaagaagcaaaag 347 |||||||||||||||||||| Sbjct: 26519 aaagtgagaagaagcaaaag 26500
>emb|AL590389.8| Mouse DNA sequence from clone RP23-393F23 on chromosome 2, complete sequence Length = 207901 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ctgtcagggacactctgctc 47 |||||||||||||||||||| Sbjct: 51687 ctgtcagggacactctgctc 51706
>gb|AY130758.1| Caenorhabditis elegans titin locus, complete sequence Length = 126899 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agaagaagcaaaagaagaag 353 |||||||||||||||||||| Sbjct: 94213 agaagaagcaaaagaagaag 94232
>gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermediate transcription control protein (BICP4) gene, complete cds Length = 8113 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcgcgcggccccggcggcgc 100 |||||||||||||||||||| Sbjct: 5114 gcgcgcggccccggcggcgc 5133
>gb|L14321.1|HSBBICP4B Bovine herpesvirus type 1 immedidate-early transcriptional control protein (BICP4) gene, 5' end Length = 2764 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcgcgcggccccggcggcgc 100 |||||||||||||||||||| Sbjct: 2362 gcgcgcggccccggcggcgc 2381 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,339,812 Number of Sequences: 3902068 Number of extensions: 3339812 Number of successful extensions: 76063 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74926 Number of HSP's gapped (non-prelim): 1137 length of query: 438 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 416 effective length of database: 17,147,199,772 effective search space: 7133235105152 effective search space used: 7133235105152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
