ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl20d11 |
|---|---|
| Clone Library Name | barley_pub |
>SND1_BRARE (Q7ZT42) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (4SNc-Tudor domain protein) Length = 897 Score = 73.6 bits (179), Expect = 3e-13 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 4/139 (2%) Frame = +3 Query: 21 GREFGTVYLGD----KNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLG 188 GRE+G VYLG +N+A VA G A V+ +G +G P L LE+ AK G Sbjct: 106 GREYGMVYLGKDTSGENIAESLVAEGLAMVRREGIRGNNP--EQVRLCDLEDQAKSSKKG 163 Query: 189 RWSKEPGAAEESIRDLPPSAIGELSGFGAKGFAVANKGKSLEAIVEQVRDGSTVRVYLLP 368 WS+ G +IRDL + + + F + K + AI+E VRDG VR LLP Sbjct: 164 LWSE--GGGSHTIRDL------KYTIENPRNFVDSLHQKPVNAIIEHVRDGCMVRALLLP 215 Query: 369 SFQFVQIYVAGVQAPSMGR 425 + V + ++G+++P+ R Sbjct: 216 DYYLVTVMLSGIKSPTFKR 234 Score = 50.4 bits (119), Expect = 3e-06 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 3/148 (2%) Frame = +3 Query: 24 REFGTVYLGDKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLGRWSKE 203 R TV +G N+A V+ G A V + + EL+ E A + G G SK Sbjct: 441 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 499 Query: 204 PGAAEESIRDLPPSAIGELSGFGAKG---FAVANKGKSLEAIVEQVRDGSTVRVYLLPSF 374 +++P + ++SG K F + EA+VE V GS +++Y+ Sbjct: 500 --------KEVPIHRVADISGETQKAKQFFPFLQRAGRSEAVVEYVFSGSRLKLYMPKET 551 Query: 375 QFVQIYVAGVQAPSMGRRPPNPTVVAEP 458 + +AG++ P R P VAEP Sbjct: 552 CLITFLLAGIECPRGSRNMPGGMQVAEP 579
>SND1_BOVIN (Q863B3) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) Length = 910 Score = 70.5 bits (171), Expect = 2e-12 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 4/150 (2%) Frame = +3 Query: 21 GREFGTVYLGD----KNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLG 188 GRE+G +YLG +N+A VA G A + +G + P N L EE AK G Sbjct: 106 GREYGMIYLGKDTNGENIAESLVAEGLA-TRREGMRANNPEQN--RLAECEEQAKASKKG 162 Query: 189 RWSKEPGAAEESIRDLPPSAIGELSGFGAKGFAVANKGKSLEAIVEQVRDGSTVRVYLLP 368 WS+ G +IRDL + + + F ++ K + AI+E VRDGS VR LLP Sbjct: 163 MWSE--GNGSHTIRDL------KYTIENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLP 214 Query: 369 SFQFVQIYVAGVQAPSMGRRPPNPTVVAEP 458 + V + ++G++ P+ RR + + EP Sbjct: 215 DYYLVTVMLSGIKCPTF-RREADGSETPEP 243 Score = 45.1 bits (105), Expect = 1e-04 Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 4/149 (2%) Frame = +3 Query: 24 REFGTVYLGDKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLGRWSKE 203 R TV +G N+A V+ G A V + + EL+ E A + G G SK Sbjct: 438 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 496 Query: 204 PGAAEESIRDLPPSAIGELSGFG--AKGFA--VANKGKSLEAIVEQVRDGSTVRVYLLPS 371 +++P + ++SG AK F + G+S EA+VE V GS +++YL Sbjct: 497 --------KEVPIHRVADISGDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKE 547 Query: 372 FQFVQIYVAGVQAPSMGRRPPNPTVVAEP 458 + +AG++ P R P EP Sbjct: 548 TCLITFLLAGIECPRGARNLPGLVQEGEP 576
>SND1_HUMAN (Q7KZF4) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (EBNA2 coactivator p100) Length = 910 Score = 69.7 bits (169), Expect = 4e-12 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 4/150 (2%) Frame = +3 Query: 21 GREFGTVYLGD----KNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLG 188 GRE+G +YLG +N+A VA G A + +G + P N L EE AK G Sbjct: 106 GREYGMIYLGKDTNGENIAESLVAEGLA-TRREGMRANNPEQN--RLSECEEQAKAAKKG 162 Query: 189 RWSKEPGAAEESIRDLPPSAIGELSGFGAKGFAVANKGKSLEAIVEQVRDGSTVRVYLLP 368 WS+ G +IRDL + + + F ++ K + AI+E VRDGS VR LLP Sbjct: 163 MWSE--GNGSHTIRDL------KYTIENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLP 214 Query: 369 SFQFVQIYVAGVQAPSMGRRPPNPTVVAEP 458 + V + ++G++ P+ RR + + EP Sbjct: 215 DYYLVTVMLSGIKCPTF-RREADGSETPEP 243 Score = 45.1 bits (105), Expect = 1e-04 Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 4/149 (2%) Frame = +3 Query: 24 REFGTVYLGDKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLGRWSKE 203 R TV +G N+A V+ G A V + + EL+ E A + G G SK Sbjct: 438 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 496 Query: 204 PGAAEESIRDLPPSAIGELSGFG--AKGFA--VANKGKSLEAIVEQVRDGSTVRVYLLPS 371 +++P + ++SG AK F + G+S EA+VE V GS +++YL Sbjct: 497 --------KEVPIHRVADISGDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKE 547 Query: 372 FQFVQIYVAGVQAPSMGRRPPNPTVVAEP 458 + +AG++ P R P EP Sbjct: 548 TCLITFLLAGIECPRGARNLPGLVQEGEP 576
>SND1_MOUSE (Q78PY7) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) Length = 910 Score = 68.9 bits (167), Expect = 7e-12 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 4/150 (2%) Frame = +3 Query: 21 GREFGTVYLGD----KNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLG 188 GRE+G +YLG +N+A VA G A + +G + P N L EE AK G Sbjct: 106 GREYGMIYLGKDTNGENIAESLVAEGLA-TRREGMRANNPEQN--RLSECEEQAKASKKG 162 Query: 189 RWSKEPGAAEESIRDLPPSAIGELSGFGAKGFAVANKGKSLEAIVEQVRDGSTVRVYLLP 368 WS+ G +IRDL + + + F ++ K + AI+E VRDGS VR LLP Sbjct: 163 MWSE--GNGSHTIRDL------KYTIENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLP 214 Query: 369 SFQFVQIYVAGVQAPSMGRRPPNPTVVAEP 458 V + ++G++ P+ RR + + EP Sbjct: 215 GHHLVTVMLSGIKCPTF-RRETDGSETPEP 243 Score = 45.1 bits (105), Expect = 1e-04 Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 4/149 (2%) Frame = +3 Query: 24 REFGTVYLGDKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLGRWSKE 203 R TV +G N+A V+ G A V + + EL+ E A + G G SK Sbjct: 438 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 496 Query: 204 PGAAEESIRDLPPSAIGELSGFG--AKGFA--VANKGKSLEAIVEQVRDGSTVRVYLLPS 371 +++P + ++SG AK F + G+S EA+VE V GS +++YL Sbjct: 497 --------KEVPIHRVADISGDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKE 547 Query: 372 FQFVQIYVAGVQAPSMGRRPPNPTVVAEP 458 + +AG++ P R P EP Sbjct: 548 TCLITFLLAGIECPRGARNLPGLVQEGEP 576
>SND1_RAT (Q66X93) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (SND p102) (p105 coactivator) Length = 909 Score = 68.2 bits (165), Expect = 1e-11 Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 4/150 (2%) Frame = +3 Query: 21 GREFGTVYLGD----KNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLG 188 GRE+G +YLG +N+A VA G A +E G + P N L EE AK G Sbjct: 105 GREYGMIYLGKDTNGENIAESLVAEGLASRRE-GMRANNPEQN--RLSECEEQAKASKKG 161 Query: 189 RWSKEPGAAEESIRDLPPSAIGELSGFGAKGFAVANKGKSLEAIVEQVRDGSTVRVYLLP 368 WS+ G +IRDL + + + F ++ K + AI+E VRDGS VR LLP Sbjct: 162 MWSE--GNGSHTIRDL------KYTIENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLP 213 Query: 369 SFQFVQIYVAGVQAPSMGRRPPNPTVVAEP 458 V + ++G++ P+ RR + + EP Sbjct: 214 DHYLVTVMLSGIKCPTF-RRETDGSETPEP 242 Score = 45.1 bits (105), Expect = 1e-04 Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 4/149 (2%) Frame = +3 Query: 24 REFGTVYLGDKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLGRWSKE 203 R TV +G N+A V+ G A V + + EL+ E A + G G SK Sbjct: 437 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 495 Query: 204 PGAAEESIRDLPPSAIGELSGFG--AKGFA--VANKGKSLEAIVEQVRDGSTVRVYLLPS 371 +++P + ++SG AK F + G+S EA+VE V GS +++YL Sbjct: 496 --------KEVPIHRVADISGDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKE 546 Query: 372 FQFVQIYVAGVQAPSMGRRPPNPTVVAEP 458 + +AG++ P R P EP Sbjct: 547 TCLITFLLAGIECPRGARNLPGLVQEGEP 575
>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1199 Score = 37.4 bits (85), Expect = 0.022 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 8/123 (6%) Frame = -1 Query: 349 TVLPSRTCSTMASRLLPLFATAKPFAPKPLSSPIADGGRSLIDSSAAPGSLLQRPKPCC- 173 T LP+ T + A P+F + +PFA PLS P + + + AP + P Sbjct: 730 TALPT-TATATAHTFKPIFESVEPFAAMPLSPPFS------LKQTTAPATTAATSAPLLT 782 Query: 172 -LATSSNLISSETFGSGSPPLGPCSFTLAHPAATAK*ATFLS------PR*TVPNSRPML 14 L T+++ +++ T S S P+ T A A+ +T S P T +S P L Sbjct: 783 GLGTATSTVATGTTASASKPVFGFGVTTAASTASTIASTSQSILFGGAPPVTASSSAPAL 842 Query: 13 GAV 5 ++ Sbjct: 843 ASI 845
>ENO_ARCFU (O29133) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 399 Score = 32.0 bits (71), Expect = 0.93 Identities = 17/39 (43%), Positives = 28/39 (71%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEV 167 D+ +A+LAVA A++ + G GGE + ++ELIR+EE+ Sbjct: 353 DETLAHLAVAFN-AKLIKTGVVGGERISKLNELIRIEEL 390
>ENO_METTH (O26149) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 416 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D +A+LAVA G +K G GGE + ++ELIR++E Sbjct: 368 DDTIAHLAVAFGAPLIKT-GAIGGERIAKLNELIRIQE 404
>ERBB3_PONPY (Q5RB22) Receptor tyrosine-protein kinase erbB-3 precursor (EC| 2.7.10.1) Length = 1342 Score = 30.8 bits (68), Expect = 2.1 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = +2 Query: 374 PICPDIC---CWSAGPIHGETPTESYCCCRTRGH 466 P C ++C CW +GP +T T++ C + GH Sbjct: 184 PPCHEVCKGRCWGSGPEDCQTLTKTICAPQCNGH 217
>ENO_PROAC (Q6AAB8) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 426 Score = 30.8 bits (68), Expect = 2.1 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D +A LAVA ++K P GE + ++L+R+EE Sbjct: 370 DTTIADLAVALSTGQIKSGAPARGERIAKYNQLLRIEE 407
>ENGB_RHILO (Q98D85) Probable GTP-binding protein engB| Length = 212 Score = 30.8 bits (68), Expect = 2.1 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 11/68 (16%) Frame = +3 Query: 135 NVSELIRLEEVAKQQGLGRWSKEPGAAEE-----------SIRDLPPSAIGELSGFGAKG 281 NV + + + Q+GL R S PG +E DLPP A+ ++ G+ G Sbjct: 38 NVGKSSLINALVNQKGLARTSNTPGRTQELNYFVPDGFSGEGADLPPMALVDMPGY---G 94 Query: 282 FAVANKGK 305 +A A K K Sbjct: 95 YATAPKEK 102
>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]| Length = 2559 Score = 30.8 bits (68), Expect = 2.1 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -1 Query: 301 PLFATAKPFAPKPLSSPIADGGRSLIDSSAAPGSL 197 PL+ T+ P AP+P P D G +++S G+L Sbjct: 2523 PLYETSTPAAPEPSCDPFTDSGERELENSDPLGAL 2557
>PDZK1_MOUSE (Q9JIL4) PDZ domain-containing protein 1 (CFTR-associated protein| of 70 kDa) (Na/Pi cotransporter C-terminal-associated protein) (NaPi-Cap1) (Na(+)/H(+) exchanger regulatory factor 3) (Sodium-hydrogen exchanger regulatory factor 3) Length = 519 Score = 30.8 bits (68), Expect = 2.1 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 8/93 (8%) Frame = +3 Query: 204 PGAAEESIRDLPPSAIGELSGFGAKGFAVANKGKSLEA-----IVEQVRDGSTVRVYLLP 368 P + I+D+ P + E +G VA GKS+EA +VE +R G L+ Sbjct: 261 PEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVL 320 Query: 369 SFQFVQIYVAGVQAPSM---GRRPPNPTVVAEP 458 + IY +P + + PN +V P Sbjct: 321 DKEAESIYSLARFSPLLYCQSQELPNGSVKEGP 353
>IRX2_MOUSE (P81066) Iroquois-class homeodomain protein IRX-2 (Iroquois| homeobox protein 2) (Homeodomain protein IRXA2) Length = 474 Score = 30.4 bits (67), Expect = 2.7 Identities = 30/107 (28%), Positives = 44/107 (41%) Frame = -1 Query: 331 TCSTMASRLLPLFATAKPFAPKPLSSPIADGGRSLIDSSAAPGSLLQRPKPCCLATSSNL 152 T S + PL + A AP+ S GG++ + S +PG+ P P +L Sbjct: 285 TSSPLTGVEAPLLSPAPEAAPRGGS-----GGKTPLGSRTSPGA----PPPASKPKLWSL 335 Query: 151 ISSETFGSGSPPLGPCSFTLAHPAATAK*ATFLSPR*TVPNSRPMLG 11 T P LGP PAA A +T P + ++ P+LG Sbjct: 336 AEIATSDLKQPSLGPGCGPPGLPAAAAPASTGAPPGGSPYSASPLLG 382
>ENO_PYRAE (Q8ZYE7) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 419 Score = 30.4 bits (67), Expect = 2.7 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%) Frame = +3 Query: 3 YTAPNIGREFGTVYL-----GD---KNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRL 158 + A + REFG + GD K +A++AV G A V + G GGE ++ELIR+ Sbjct: 345 HQAVSAAREFGMRVIVSHRSGDTEYKTLAHIAVGFG-AEVIKTGIMGGERTAKLNELIRI 403 Query: 159 EEVAKQQGLGRWS 197 + LG+W+ Sbjct: 404 GDY-----LGKWA 411
>PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1377 Score = 30.4 bits (67), Expect = 2.7 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = -1 Query: 301 PLFATAKPFAPKPLSSPIADGGRSLIDSSAAPGSL 197 P A KP A PLS P+A+GGR L+ +PG++ Sbjct: 209 PGAAGKKPAATSPLS-PMANGGRYLLSPPTSPGAM 242
>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1371 Score = 30.4 bits (67), Expect = 2.7 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = -1 Query: 301 PLFATAKPFAPKPLSSPIADGGRSLIDSSAAPGSL 197 P A KP A PLS P+A+GGR L+ +PG++ Sbjct: 209 PGAAGKKPAATSPLS-PMANGGRYLLSPPTSPGAM 242
>ENO_MYCPA (Q741U7) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 429 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D +A LAVA G ++K P E + ++L+R+EE Sbjct: 370 DTTIADLAVAVGSGQIKTGAPARSERVAKYNQLLRIEE 407
>GUNA_ASPKA (Q12679) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase A) (Cellulase A) (Carboxymethylcellulase) (CMCase-I) Length = 239 Score = 30.0 bits (66), Expect = 3.5 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = +2 Query: 197 QGTWC-C*RIDKRSSTISNW*TKWFWCKGFCSCK*RQESG 313 QGT C +DK SS+ ++W TKW W G + K SG Sbjct: 42 QGTGSQCVYVDKLSSSGASWHTKWTWSGGEGTVKSYSNSG 81
>ENGB_RHIME (Q92SF6) Probable GTP-binding protein engB| Length = 217 Score = 30.0 bits (66), Expect = 3.5 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 12/89 (13%) Frame = +3 Query: 135 NVSELIRLEEVAKQQGLGRWSKEPGAAEE-----------SIRDLPPSAIGELSGFGAKG 281 NV + + + +GL R S PG +E DLPP A+ ++ G+G Sbjct: 44 NVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPDGYSGEAGDLPPMALVDMPGYGYAQ 103 Query: 282 FAVANKGKSLEAIVEQVRDGSTV-RVYLL 365 + + + +R ST+ RVY+L Sbjct: 104 APKEQVDAWTKLVFDYLRGRSTLKRVYVL 132
>ENO_TROWT (Q83FF7) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 428 Score = 30.0 bits (66), Expect = 3.5 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D +A +AVA ++K P GE + ++L+R+EE Sbjct: 371 DTTIADMAVATNCGQIKTGAPARGERIAKYNQLLRIEE 408
>ENO_TROW8 (Q83H73) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 428 Score = 30.0 bits (66), Expect = 3.5 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D +A +AVA ++K P GE + ++L+R+EE Sbjct: 371 DTTIADMAVATNCGQIKTGAPARGERIAKYNQLLRIEE 408
>RNHL_NEUCR (Q9P5X8) Probable ribonuclease HI large subunit (EC 3.1.26.4)| (RNase HI large subunit) (RNase H(35)) Length = 317 Score = 29.6 bits (65), Expect = 4.6 Identities = 22/64 (34%), Positives = 26/64 (40%) Frame = -1 Query: 286 AKPFAPKPLSSPIADGGRSLIDSSAAPGSLLQRPKPCCLATSSNLISSETFGSGSPPLGP 107 A PF P +S P G S S P LL PCCL + G G P LGP Sbjct: 8 AGPFLPPTISPPALLSGVSQTYFSPIPPQLLADNTPCCLGV-------DEAGRG-PVLGP 59 Query: 106 CSFT 95 ++ Sbjct: 60 MVYS 63
>ENGB_BRUSU (P64067) Probable GTP-binding protein engB| Length = 241 Score = 29.6 bits (65), Expect = 4.6 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 12/89 (13%) Frame = +3 Query: 135 NVSELIRLEEVAKQQGLGRWSKEPGAAEE-----------SIRDLPPSAIGELSGFGAKG 281 NV + + + ++GL R S PG +E DLPP A+ ++ G+G Sbjct: 67 NVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSGENGDLPPLALVDMPGYGFAE 126 Query: 282 FAVANKGKSLEAIVEQVRDGSTV-RVYLL 365 A + + +R +T+ RVY+L Sbjct: 127 APKAQVDAWTRLVFDYLRGRTTLKRVYVL 155
>ENGB_BRUME (P64066) Probable GTP-binding protein engB| Length = 241 Score = 29.6 bits (65), Expect = 4.6 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 12/89 (13%) Frame = +3 Query: 135 NVSELIRLEEVAKQQGLGRWSKEPGAAEE-----------SIRDLPPSAIGELSGFGAKG 281 NV + + + ++GL R S PG +E DLPP A+ ++ G+G Sbjct: 67 NVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSGENGDLPPLALVDMPGYGFAE 126 Query: 282 FAVANKGKSLEAIVEQVRDGSTV-RVYLL 365 A + + +R +T+ RVY+L Sbjct: 127 APKAQVDAWTRLVFDYLRGRTTLKRVYVL 155
>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) Length = 1200 Score = 29.6 bits (65), Expect = 4.6 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Frame = -1 Query: 331 TCSTMASRLLPLFATAKPFAPKPLSSPIADGGRSLIDSSA-APGSLLQRPKPCCLATSSN 155 T ++ P+F +PF PLS+P SL ++A A + P L T+++ Sbjct: 735 TAASTTPTFKPIFDKMEPFTAMPLSTPF-----SLKQTTATATTTATSAPLFTGLGTATS 789 Query: 154 LISSETFGSGSPPLGPCSFTLAHPAATA 71 ++S T S S P+ T A A++ Sbjct: 790 TVASGTAASASKPVFGFGVTTAASTASS 817
>CT2NL_HUMAN (Q9P2B4) CTTNBP2 N-terminal-like protein| Length = 639 Score = 29.3 bits (64), Expect = 6.0 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 271 PKPLSSPIADGGRSLIDSSAAPGSLLQRPKPCCLATSSNLISSETFGSGSPPLG 110 P P+ SP++ G SL SS A SL P SS +++ GS + G Sbjct: 399 PVPMPSPLSSSGSSLSPSSTASSSLTSSP------CSSPVLTKRLLGSSASSPG 446
>CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2)| Length = 1662 Score = 29.3 bits (64), Expect = 6.0 Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 8/102 (7%) Frame = -1 Query: 304 LPLFATAKPFAPKPLSSPIADG--------GRSLIDSSAAPGSLLQRPKPCCLATSSNLI 149 LPL KP PL+S A G R ID A+ G L+ P +S+N I Sbjct: 321 LPLTMPVKPSTGSPLASANAKGSVCSSAAMARPGIDRQASHGDLIGVSVPAFPPSSANRI 380 Query: 148 SSETFGSGSPPLGPCSFTLAHPAATAK*ATFLSPR*TVPNSR 23 +GS P P S P+ A +T +P T NS+ Sbjct: 381 EENGPSTGSTP-DPTSSIPPLPSNAAP-STAQTPGITPQNSQ 420
>STAD_BRANA (P29108) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 398 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = -1 Query: 256 SPIADGGRSLIDSSAAPGSLLQRPKPCCLATSSNLISSETFGSGSPPLGP 107 +P+A + S+ P S + PK CLA+SS +SS+ S P P Sbjct: 6 NPLASQPYNFPSSARPPISTFRSPKFLCLASSSPALSSKEVESLKKPFTP 55
>K0431_HUMAN (O43313) Protein KIAA0431| Length = 667 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/69 (30%), Positives = 32/69 (46%) Frame = -1 Query: 343 LPSRTCSTMASRLLPLFATAKPFAPKPLSSPIADGGRSLIDSSAAPGSLLQRPKPCCLAT 164 L S CS S LPLF A P A +P+S+ + ++ +P + LQ C Sbjct: 199 LDSEACSLKES--LPLFKIANPIAGEPISTGVQ------VNFGKSPSNPLQELGNTCQKN 250 Query: 163 SSNLISSET 137 S + I+ +T Sbjct: 251 SISSINVQT 259
>ENO_METMP (Q6M075) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 426 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D +A LAVA ++K P GE ++L+R+EE Sbjct: 373 DSTIADLAVALNAGQIKTGAPARGERTAKYNQLMRIEE 410
>ENO1_STRCO (Q9F2Q3) Enolase 1 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 1)| (2-phospho-D-glycerate hydro-lyase 1) Length = 426 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEV 167 D +A LAVA ++K P E + ++L+R+EE+ Sbjct: 370 DVTIADLAVATNCGQIKTGAPARSERVAKYNQLLRIEEI 408
>ENO_MYCTU (P96377) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 429 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D +A LAVA G ++K P E + ++L+R+EE Sbjct: 370 DTMIADLAVAIGSGQIKTGAPARSERVAKYNQLLRIEE 407
>ENO_MYCBO (Q7U0U6) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 429 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D +A LAVA G ++K P E + ++L+R+EE Sbjct: 370 DTMIADLAVAIGSGQIKTGAPARSERVAKYNQLLRIEE 407
>ENO_METAC (Q8TQ79) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 429 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D ++ LAVA G +K P GE ++L+R+EE Sbjct: 381 DTTISDLAVAIGAEMIKTGAPARGERTAKYNQLLRIEE 418
>ENO_HALMA (P29201) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 401 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVA 170 D +A+LAVA +K G GGE ++ELIR+E+ A Sbjct: 362 DTTIAHLAVATDAPFIKT-GAVGGERTAKLNELIRIEDNA 400
>WNT9A_MOUSE (Q8R5M2) Protein Wnt-9a precursor (Wnt-14)| Length = 365 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +3 Query: 93 RVKEQGPKGGEPLPNVSELIRLEEVAKQQGLGRWSKEPGAA 215 R + G GG+PLP EL+ L++ GR+S PG A Sbjct: 271 RGRASGSGGGDPLPRTPELVHLDDSPSFCLAGRFS--PGTA 309
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 28.9 bits (63), Expect = 7.8 Identities = 23/75 (30%), Positives = 30/75 (40%) Frame = -1 Query: 292 ATAKPFAPKPLSSPIADGGRSLIDSSAAPGSLLQRPKPCCLATSSNLISSETFGSGSPPL 113 A AKP APKP +S G + A P + +P P + +S + P Sbjct: 66 AAAKPAAPKPAASAAPKPG-----APAKPAAPAAKPAPAAPSAAS---------AAKPGA 111 Query: 112 GPCSFTLAHPAATAK 68 P A PAA AK Sbjct: 112 APKPGVQAKPAAAAK 126
>ENO_NOCFA (Q5YQ30) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 428 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D +A LAVA G ++K P E + ++L+R+E+ Sbjct: 370 DTTIADLAVAVGSGQIKTGAPARSERVAKYNQLLRIED 407
>ENO_METMA (Q8PT81) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 428 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D ++ LAVA G +K P GE ++L+R+EE Sbjct: 380 DTTISDLAVAIGAEMIKTGAPARGERTAKYNQLLRIEE 417
>FOXH1_BRARE (Q9I9E1) Forkhead box protein H1 (Forkhead activin signal| transducer 1) (Fast-1) (Schmalspur protein) Length = 472 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/66 (31%), Positives = 30/66 (45%) Frame = -1 Query: 313 SRLLPLFATAKPFAPKPLSSPIADGGRSLIDSSAAPGSLLQRPKPCCLATSSNLISSETF 134 S+ LP ++ P + P D R +DS+ A SLL +P A L E++ Sbjct: 217 SKPLPPESSLPPVPTRQSPPPSEDPYRPKLDSTFAIDSLLHSLRPASSA-GEGLRERESW 275 Query: 133 GSGSPP 116 G G PP Sbjct: 276 GVGPPP 281
>EGFR_CHICK (P13387) Epidermal growth factor receptor precursor (EC 2.7.10.1)| (CER) (Fragment) Length = 703 Score = 28.9 bits (63), Expect = 7.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 374 PICPDICCWSAGPIH 418 P+C D+ CW GP H Sbjct: 515 PLCSDVGCWGPGPFH 529
>CP2S1_HUMAN (Q96SQ9) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1)| Length = 504 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +3 Query: 69 LAVAAGWARVKEQGPKGGEPLPNVSELIRLEEVAKQQGLGRWSKEPG 209 L +A R + P G PLP + L++L A GL R SK+ G Sbjct: 19 LTLALSGTRARGHLPPGPTPLPLLGNLLQLRPGALYSGLMRLSKKYG 65
>ENO_CORDI (Q6NI61) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 425 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +3 Query: 51 DKNVAYLAVAAGWARVKEQGPKGGEPLPNVSELIRLEE 164 D +A LAVA G ++K P E + ++L+R+E+ Sbjct: 369 DTTIADLAVALGCGQIKTGAPARSERVAKYNQLLRIEQ 406 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,301,138 Number of Sequences: 219361 Number of extensions: 1644901 Number of successful extensions: 6080 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 5784 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6066 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
