ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl20d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY596621.1| Saccharum officinarum clone SCJFRZ1007E03, comple... 44 0.16
2ref|XM_477260.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.63
3ref|XM_653440.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 0.63
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.63
5dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.63
6dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.63
7ref|NM_188390.1| Oryza sativa (japonica cultivar-group), Ozsa811... 40 2.5
8ref|NM_187806.2| Oryza sativa (japonica cultivar-group), mRNA 40 2.5
9gb|DQ335872.1| Bos taurus protein tyrosine phosphatase receptor ... 40 2.5
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.5
11gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.5
12emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete ch... 40 2.5
13gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 2.5
14gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 2.5
15gb|AF352154.1|AF352154 Macrocystis angustifolia clone Australia-... 40 2.5
16gb|AF352153.1|AF352153 Macrocystis angustifolia clone Australia-... 40 2.5
17gb|AF352143.1|AF352143 Macrocystis pyrifera clone BTortugas-8 in... 40 2.5
18gb|AF352142.1|AF352142 Macrocystis pyrifera clone BTortugas-7c i... 40 2.5
19gb|AF352140.1|AF352140 Macrocystis pyrifera clone BTortugas-7a i... 40 2.5
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
22gb|AF177992.1|AF177992 Spigelia coelostylioides internal transcr... 40 2.5
23dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
24dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
25dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
26dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
27dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
28dbj|AK120815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
29dbj|AK119897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
30dbj|AK104322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
31dbj|AK071702.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
32dbj|AK068329.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
33dbj|AK062612.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
34gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 2.5
35gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones B... 38 9.8
36ref|XM_550598.1| Oryza sativa (japonica cultivar-group), mRNA 38 9.8
37ref|XM_493710.2| Oryza sativa (japonica cultivar-group), mRNA 38 9.8
38ref|NM_184396.2| Oryza sativa (japonica cultivar-group), mRNA 38 9.8
39gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 38 9.8
40ref|XM_482427.1| Oryza sativa (japonica cultivar-group), mRNA 38 9.8
41ref|XM_474431.1| Oryza sativa (japonica cultivar-group), predic... 38 9.8
42ref|XM_474412.1| Oryza sativa (japonica cultivar-group), predic... 38 9.8
43ref|XM_468531.1| Oryza sativa (japonica cultivar-group), mRNA 38 9.8
44gb|BT018407.1| Zea mays clone EL01N0326A09.d mRNA sequence 38 9.8
45gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete se... 38 9.8
46ref|XM_750917.1| Aspergillus fumigatus Af293 peroxisome assembly... 38 9.8
47emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4,... 38 9.8
48gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 38 9.8
49gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 38 9.8
50gb|AF319038.1|AF319038 Macrocystis sp. 18S ribosomal RNA gene, p... 38 9.8
51gb|AC134763.4| Rattus norvegicus BAC CH230-221M14 (Children's H... 38 9.8
52gb|CP000264.1| Jannaschia sp. CCS1, complete genome 38 9.8
53gb|AF352159.1|AF352159 Macrocystis pyrifera clone NZealand-2 int... 38 9.8
54gb|AF352158.1|AF352158 Macrocystis pyrifera clone NZealand-1 int... 38 9.8
55gb|AF352157.1|AF352157 Macrocystis pyrifera clone TasmaniaC inte... 38 9.8
56gb|AF352156.1|AF352156 Macrocystis pyrifera clone TasmaniaB inte... 38 9.8
57gb|AF352155.1|AF352155 Macrocystis pyrifera clone TasmaniaA inte... 38 9.8
58gb|AF352152.1|AF352152 Macrocystis laevis clone Marion-4 interna... 38 9.8
59gb|AF352151.1|AF352151 Macrocystis laevis clone Marion-2c intern... 38 9.8
60gb|AF352150.1|AF352150 Macrocystis laevis clone Marion-2b intern... 38 9.8
61gb|AF352149.1|AF352149 Macrocystis laevis clone Marion-2a intern... 38 9.8
62gb|AF352148.1|AF352148 Macrocystis angustifolia clone SAfrica-2 ... 38 9.8
63gb|AF352147.1|AF352147 Macrocystis angustifolia clone SAfrica-1 ... 38 9.8
64gb|AF352146.1|AF352146 Macrocystis pyrifera clone Chile-4 intern... 38 9.8
65gb|AF352145.1|AF352145 Macrocystis pyrifera clone Chile-1 intern... 38 9.8
66gb|AF352141.1|AF352141 Macrocystis pyrifera clone BTortugas-7b i... 38 9.8
67gb|AF352135.1|AF352135 Macrocystis pyrifera clone Catalina-3d in... 38 9.8
68gb|AF352134.1|AF352134 Macrocystis pyrifera clone Catalina-3c in... 38 9.8
69gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 38 9.8
70ref|XM_688700.1| PREDICTED: Danio rerio similar to ATP-binding c... 38 9.8
71gb|S53630.1| Zea mays auxin-binding protein (ABP) mRNA, complete... 38 9.8
72gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 38 9.8
73dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
74dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
75dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
76dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
77gb|AF291747.1|AF291747 Gallus gallus zinc-finger transcription f... 38 9.8
78dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
79dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
80gb|AC005866.4| Homo sapiens 12 BAC RP11-407G6 (Roswell Park Canc... 38 9.8
81gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.8
82gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.8
83dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
84dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
85dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
86dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
87dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
88dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
89dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
90gb|AE005089.1| Halobacterium sp. NRC-1 section 120 of 170 of the... 38 9.8
91dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
92dbj|AK119784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.8
93dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
94dbj|AK120917.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.8
95dbj|AK110646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.8
96ref|XM_311412.2| Anopheles gambiae str. PEST ENSANGP00000016830 ... 38 9.8
97dbj|AK109202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.8
98dbj|AK103666.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.8
99dbj|AK099954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.8
100dbj|AK066014.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.8
101dbj|AK062952.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.8
102dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
103dbj|AP003805.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
104emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 38 9.8
105emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 38 9.8
106emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 38 9.8
107gb|AC105906.21| Mus musculus chromosome 7, clone RP24-81O24, com... 38 9.8
108emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 38 9.8
109gb|AC148985.4| Mus musculus BAC clone RP23-124O21 from chromosom... 38 9.8
110gb|L08425.1|MZEABP1X Zea mays auxin-binding protein (abp1) gene,... 38 9.8 
>gb|AY596621.1| Saccharum officinarum clone SCJFRZ1007E03, complete sequence
          Length = 1068

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 98  actactcgccgccgccgccgga 119
           ||||||||||||||||||||||
Sbjct: 918 actactcgccgccgccgccgga 897
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>ref|XM_477260.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 450

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 93  ctactactactcgccgccgccgccg 117
           ||||||||||||||| |||||||||
Sbjct: 132 ctactactactcgcccccgccgccg 156
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>ref|XM_653440.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0928.2), mRNA
          Length = 1725

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 97   tactactcgccgccgccgccg 117
            |||||||||||||||||||||
Sbjct: 1291 tactactcgccgccgccgccg 1311
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 93      ctactactactcgccgccgccgccg 117
               ||||||||||||||| |||||||||
Sbjct: 8211733 ctactactactcgcccccgccgccg 8211757



 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 100      tactcgccgccgccgccgga 119
                ||||||||||||||||||||
Sbjct: 24294653 tactcgccgccgccgccgga 24294672



 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 98       actactcgccgccgccgccg 117
                ||||||||||||||||||||
Sbjct: 12794259 actactcgccgccgccgccg 12794240



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 23      gccccaaatccccatctcg 41
               |||||||||||||||||||
Sbjct: 6531885 gccccaaatccccatctcg 6531903
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>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0003K21
          Length = 158810

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 93    ctactactactcgccgccgccgccg 117
             ||||||||||||||| |||||||||
Sbjct: 94756 ctactactactcgcccccgccgccg 94780
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>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0639B07
          Length = 138780

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 93   ctactactactcgccgccgccgccg 117
            ||||||||||||||| |||||||||
Sbjct: 6845 ctactactactcgcccccgccgccg 6869
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>ref|NM_188390.1| Oryza sativa (japonica cultivar-group), Ozsa8116 predicted mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  gctactactactcgccgccgccgc 115
           ||||||||| ||||||||||||||
Sbjct: 24  gctactactcctcgccgccgccgc 47
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>ref|NM_187806.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1492

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  actactcgccgccgccgccg 117
           ||||||||||||||||||||
Sbjct: 587 actactcgccgccgccgccg 606
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>gb|DQ335872.1| Bos taurus protein tyrosine phosphatase receptor type G mRNA,
           complete cds
          Length = 5273

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  ctactcgccgccgccgccgg 118
           ||||||||||||||||||||
Sbjct: 356 ctactcgccgccgccgccgg 375
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 100      tactcgccgccgccgccgga 119
                ||||||||||||||||||||
Sbjct: 12808915 tactcgccgccgccgccgga 12808896



 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 102     ctcgccgccgccgccggaacccta 125
               |||||||||| |||||||||||||
Sbjct: 5803148 ctcgccgccgtcgccggaacccta 5803125



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 23      gccccaaatccccatctcg 41
               |||||||||||||||||||
Sbjct: 6913293 gccccaaatccccatctcg 6913275
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>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06,
             complete sequence
          Length = 132243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   tactcgccgccgccgccgga 119
             ||||||||||||||||||||
Sbjct: 47131 tactcgccgccgccgccgga 47112
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>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12
          Length = 306250

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ccctatccgcctccgcccca 28
              ||||||||||||||||||||
Sbjct: 177560 ccctatccgcctccgcccca 177579
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>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0021B21, from chromosome 3, complete sequence
          Length = 139208

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 102   ctcgccgccgccgccggaacccta 125
             |||||||||| |||||||||||||
Sbjct: 31978 ctcgccgccgtcgccggaacccta 31955
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>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   ctcgccgccgccgccggaacccta 125
             |||||||||| |||||||||||||
Sbjct: 28023 ctcgccgccgtcgccggaacccta 28046
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>gb|AF352154.1|AF352154 Macrocystis angustifolia clone Australia-4 internal transcribed
           spacer 2, complete sequence
          Length = 383

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 cgccgccgccgccggaaccc 123
           ||||||||||||||||||||
Sbjct: 350 cgccgccgccgccggaaccc 369
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>gb|AF352153.1|AF352153 Macrocystis angustifolia clone Australia-1 internal transcribed
           spacer 2, complete sequence
          Length = 381

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 cgccgccgccgccggaaccc 123
           ||||||||||||||||||||
Sbjct: 348 cgccgccgccgccggaaccc 367
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>gb|AF352143.1|AF352143 Macrocystis pyrifera clone BTortugas-8 internal transcribed spacer
           2, complete sequence
          Length = 381

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 cgccgccgccgccggaaccc 123
           ||||||||||||||||||||
Sbjct: 348 cgccgccgccgccggaaccc 367
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>gb|AF352142.1|AF352142 Macrocystis pyrifera clone BTortugas-7c internal transcribed spacer
           2, complete sequence
          Length = 377

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 cgccgccgccgccggaaccc 123
           ||||||||||||||||||||
Sbjct: 344 cgccgccgccgccggaaccc 363
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>gb|AF352140.1|AF352140 Macrocystis pyrifera clone BTortugas-7a internal transcribed spacer
           2, complete sequence
          Length = 377

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 cgccgccgccgccggaaccc 123
           ||||||||||||||||||||
Sbjct: 344 cgccgccgccgccggaaccc 363
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 100      tactcgccgccgccgccgga 119
                ||||||||||||||||||||
Sbjct: 12805678 tactcgccgccgccgccgga 12805659



 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 102     ctcgccgccgccgccggaacccta 125
               |||||||||| |||||||||||||
Sbjct: 5802361 ctcgccgccgtcgccggaacccta 5802338



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 23      gccccaaatccccatctcg 41
               |||||||||||||||||||
Sbjct: 6911188 gccccaaatccccatctcg 6911170
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 92      gctactactactcgccgccgccgc 115
               ||||||||| ||||||||||||||
Sbjct: 6007927 gctactactcctcgccgccgccgc 6007904



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 14       tccgcctccgccccaaatcccca 36
                |||||||||||||| ||||||||
Sbjct: 40493406 tccgcctccgcccccaatcccca 40493428



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 102     ctcgccgccgccgccggaa 120
               |||||||||||||||||||
Sbjct: 2809374 ctcgccgccgccgccggaa 2809392
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>gb|AF177992.1|AF177992 Spigelia coelostylioides internal transcribed spacer 1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer 2,
           complete sequence
          Length = 614

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 32  ccccatctcggacggagccgaccc 55
           ||||||| ||||||||||||||||
Sbjct: 553 ccccatcgcggacggagccgaccc 576
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>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0466B10
          Length = 151806

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    gctactactactcgccgccgccgc 115
             ||||||||| ||||||||||||||
Sbjct: 75815 gctactactcctcgccgccgccgc 75792
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>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031E09
          Length = 176349

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    gctactactactcgccgccgccgc 115
             ||||||||| ||||||||||||||
Sbjct: 32284 gctactactcctcgccgccgccgc 32261
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>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0710F09
          Length = 198867

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    actactcgccgccgccgccg 117
             ||||||||||||||||||||
Sbjct: 52383 actactcgccgccgccgccg 52364
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>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1579_C03
          Length = 122851

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   tactcgccgccgccgccgga 119
             ||||||||||||||||||||
Sbjct: 27846 tactcgccgccgccgccgga 27865
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>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0453E05
          Length = 137364

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    tactcgccgccgccgccgga 119
              ||||||||||||||||||||
Sbjct: 106204 tactcgccgccgccgccgga 106223
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>dbj|AK120815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014N07, full
            insert sequence
          Length = 3856

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  tactcgccgccgccgccgga 119
            ||||||||||||||||||||
Sbjct: 3522 tactcgccgccgccgccgga 3503
to top
>dbj|AK119897.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-C07, full
            insert sequence
          Length = 3732

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  tactcgccgccgccgccgga 119
            ||||||||||||||||||||
Sbjct: 3480 tactcgccgccgccgccgga 3461
to top
>dbj|AK104322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A02, full
           insert sequence
          Length = 948

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  gctactactactcgccgccgccgc 115
           ||||||||| ||||||||||||||
Sbjct: 97  gctactactcctcgccgccgccgc 120
to top
>dbj|AK071702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108G02, full
           insert sequence
          Length = 954

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  gctactactactcgccgccgccgc 115
           ||||||||| ||||||||||||||
Sbjct: 102 gctactactcctcgccgccgccgc 125
to top
>dbj|AK068329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136I24, full
           insert sequence
          Length = 1005

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  gctactactactcgccgccgccgc 115
           ||||||||| ||||||||||||||
Sbjct: 98  gctactactcctcgccgccgccgc 121
to top
>dbj|AK062612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-A10, full
           insert sequence
          Length = 1492

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  actactcgccgccgccgccg 117
           ||||||||||||||||||||
Sbjct: 587 actactcgccgccgccgccg 606
to top
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 16      cgcctccgccccaaatcccc 35
               ||||||||||||||||||||
Sbjct: 5490684 cgcctccgccccaaatcccc 5490665
to top
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness
             locus region
          Length = 129099

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 103   tcgccgccgccgccggaac 121
             |||||||||||||||||||
Sbjct: 30502 tcgccgccgccgccggaac 30520
to top
>ref|XM_550598.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1672

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 tactcgccgccgccgccgg 118
           |||||||||||||||||||
Sbjct: 934 tactcgccgccgccgccgg 916
to top
>ref|XM_493710.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1774

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 100  tactcgccgccgccgccgg 118
            |||||||||||||||||||
Sbjct: 1031 tactcgccgccgccgccgg 1013
to top
>ref|NM_184396.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4486

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 102 ctcgccgccgccgccggaa 120
           |||||||||||||||||||
Sbjct: 63  ctcgccgccgccgccggaa 81
to top
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   cgccgccgccgccggaacc 122
             |||||||||||||||||||
Sbjct: 29284 cgccgccgccgccggaacc 29302
to top
>ref|XM_482427.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1164

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 23   gccccaaatccccatctcg 41
            |||||||||||||||||||
Sbjct: 1034 gccccaaatccccatctcg 1016
to top
>ref|XM_474431.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 609

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 cgccgccgccgccggaacc 122
           |||||||||||||||||||
Sbjct: 97  cgccgccgccgccggaacc 79
to top
>ref|XM_474412.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2718

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                          
Query: 93  ctactactact-cgccgccgccgccggaacc 122
           ||||||||||| | |||||||||||||||||
Sbjct: 281 ctactactactaccccgccgccgccggaacc 311
to top
>ref|XM_468531.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 646

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 87  cctacgctactactactcgccgccgccgccg 117
           ||||| ||||| || ||||||||||||||||
Sbjct: 41  cctactctactcctcctcgccgccgccgccg 11
to top
>gb|BT018407.1| Zea mays clone EL01N0326A09.d mRNA sequence
          Length = 1456

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 99  ctactcgccgccgccgccg 117
           |||||||||||||||||||
Sbjct: 852 ctactcgccgccgccgccg 834
to top
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence
          Length = 136866

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 100   tactcgccgccgccgccgg 118
             |||||||||||||||||||
Sbjct: 19411 tactcgccgccgccgccgg 19429
to top
>ref|XM_750917.1| Aspergillus fumigatus Af293 peroxisome assembly protein pas10
           peroxin-12 (Afu2g16730) partial mRNA
          Length = 1461

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 129 ccccgcccaacaatccgcc 147
           |||||||||||||||||||
Sbjct: 505 ccccgcccaacaatccgcc 523
to top
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12,
             complete sequence
          Length = 144670

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   cgccgccgccgccggaacc 122
             |||||||||||||||||||
Sbjct: 69466 cgccgccgccgccggaacc 69484
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 99      ctactcgccgccgccgccg 117
               |||||||||||||||||||
Sbjct: 2608186 ctactcgccgccgccgccg 2608204
to top
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    ctcgccgccgccgccggaa 120
              |||||||||||||||||||
Sbjct: 278093 ctcgccgccgccgccggaa 278111
to top
>gb|AF319038.1|AF319038 Macrocystis sp. 18S ribosomal RNA gene, partial sequence; internal
           transcribed spacer 1, 5.8S ribosomal RNA gene, internal
           transcribed spacer 2, complete sequences; and 26S
           ribosomal RNA gene, partial sequence
          Length = 1014

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 960 gccgccgccgccggaaccc 978
to top
>gb|AC134763.4| Rattus norvegicus  BAC CH230-221M14 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 222524

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 99    ctactcgccgccgccgccg 117
             |||||||||||||||||||
Sbjct: 70385 ctactcgccgccgccgccg 70403
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 102     ctcgccgccgccgccggaaccct 124
               |||||||||||||||||| ||||
Sbjct: 3095023 ctcgccgccgccgccggacccct 3095045
to top
>gb|AF352159.1|AF352159 Macrocystis pyrifera clone NZealand-2 internal transcribed spacer
           2, complete sequence
          Length = 382

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 350 gccgccgccgccggaaccc 368
to top
>gb|AF352158.1|AF352158 Macrocystis pyrifera clone NZealand-1 internal transcribed spacer
           2, complete sequence
          Length = 381

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 349 gccgccgccgccggaaccc 367
to top
>gb|AF352157.1|AF352157 Macrocystis pyrifera clone TasmaniaC internal transcribed spacer 2,
           complete sequence
          Length = 381

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 349 gccgccgccgccggaaccc 367
to top
>gb|AF352156.1|AF352156 Macrocystis pyrifera clone TasmaniaB internal transcribed spacer 2,
           complete sequence
          Length = 382

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 350 gccgccgccgccggaaccc 368
to top
>gb|AF352155.1|AF352155 Macrocystis pyrifera clone TasmaniaA internal transcribed spacer 2,
           complete sequence
          Length = 384

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 352 gccgccgccgccggaaccc 370
to top
>gb|AF352152.1|AF352152 Macrocystis laevis clone Marion-4 internal transcribed spacer 2,
           complete sequence
          Length = 380

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 348 gccgccgccgccggaaccc 366
to top
>gb|AF352151.1|AF352151 Macrocystis laevis clone Marion-2c internal transcribed spacer 2,
           complete sequence
          Length = 381

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 349 gccgccgccgccggaaccc 367
to top
>gb|AF352150.1|AF352150 Macrocystis laevis clone Marion-2b internal transcribed spacer 2,
           complete sequence
          Length = 381

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 349 gccgccgccgccggaaccc 367
to top
>gb|AF352149.1|AF352149 Macrocystis laevis clone Marion-2a internal transcribed spacer 2,
           complete sequence
          Length = 380

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 348 gccgccgccgccggaaccc 366
to top
>gb|AF352148.1|AF352148 Macrocystis angustifolia clone SAfrica-2 internal transcribed
           spacer 2, complete sequence
          Length = 380

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 348 gccgccgccgccggaaccc 366
to top
>gb|AF352147.1|AF352147 Macrocystis angustifolia clone SAfrica-1 internal transcribed
           spacer 2, complete sequence
          Length = 380

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 348 gccgccgccgccggaaccc 366
to top
>gb|AF352146.1|AF352146 Macrocystis pyrifera clone Chile-4 internal transcribed spacer 2,
           complete sequence
          Length = 380

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 348 gccgccgccgccggaaccc 366
to top
>gb|AF352145.1|AF352145 Macrocystis pyrifera clone Chile-1 internal transcribed spacer 2,
           complete sequence
          Length = 382

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 350 gccgccgccgccggaaccc 368
to top
>gb|AF352141.1|AF352141 Macrocystis pyrifera clone BTortugas-7b internal transcribed spacer
           2, complete sequence
          Length = 374

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 342 gccgccgccgccggaaccc 360
to top
>gb|AF352135.1|AF352135 Macrocystis pyrifera clone Catalina-3d internal transcribed spacer
           2, complete sequence
          Length = 381

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 349 gccgccgccgccggaaccc 367
to top
>gb|AF352134.1|AF352134 Macrocystis pyrifera clone Catalina-3c internal transcribed spacer
           2, complete sequence
          Length = 377

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gccgccgccgccggaaccc 123
           |||||||||||||||||||
Sbjct: 345 gccgccgccgccggaaccc 363
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 102     ctcgccgccgccgccggaa 120
               |||||||||||||||||||
Sbjct: 1890577 ctcgccgccgccgccggaa 1890595
to top
>ref|XM_688700.1| PREDICTED: Danio rerio similar to ATP-binding cassette 1,
           sub-family A, member 1 (LOC565421), mRNA
          Length = 1584

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 18  cctccgccccaaatcccca 36
           |||||||||||||||||||
Sbjct: 130 cctccgccccaaatcccca 112
to top
>gb|S53630.1| Zea mays auxin-binding protein (ABP) mRNA, complete cds
          Length = 795

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 101 actcgccgccgccgccgga 119
           |||||||||||||||||||
Sbjct: 53  actcgccgccgccgccgga 71
to top
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
             complete sequence
          Length = 1813164

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 96    ctactactcgccgccgccgccgg 118
             |||||||| ||||||||||||||
Sbjct: 33499 ctactactagccgccgccgccgg 33477
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 104      cgccgccgccgccggaacc 122
                |||||||||||||||||||
Sbjct: 35132963 cgccgccgccgccggaacc 35132981



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                               
Query: 93       ctactactact-cgccgccgccgccggaacc 122
                ||||||||||| | |||||||||||||||||
Sbjct: 34994087 ctactactactaccccgccgccgccggaacc 34994117
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 23       gccccaaatccccatctcg 41
                |||||||||||||||||||
Sbjct: 20024519 gccccaaatccccatctcg 20024501
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 99      ctactcgccgccgccgccg 117
               |||||||||||||||||||
Sbjct: 4259731 ctactcgccgccgccgccg 4259713



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 100     tactcgccgccgccgccgg 118
               |||||||||||||||||||
Sbjct: 1699256 tactcgccgccgccgccgg 1699274
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                               
Query: 87       cctacgctactactactcgccgccgccgccg 117
                ||||| ||||| || ||||||||||||||||
Sbjct: 35699893 cctactctactcctcctcgccgccgccgccg 35699923



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 100     tactcgccgccgccgccgg 118
               |||||||||||||||||||
Sbjct: 8239749 tactcgccgccgccgccgg 8239767
to top
>gb|AF291747.1|AF291747 Gallus gallus zinc-finger transcription factor KROX20 (KROX20)
           gene, complete cds
          Length = 3495

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 99  ctactcgccgccgccgccg 117
           |||||||||||||||||||
Sbjct: 779 ctactcgccgccgccgccg 797
to top
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0592G05
          Length = 146220

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 14     tccgcctccgccccaaatcccca 36
              |||||||||||||| ||||||||
Sbjct: 144647 tccgcctccgcccccaatcccca 144669
to top
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1033B05
          Length = 138882

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 14    tccgcctccgccccaaatcccca 36
             |||||||||||||| ||||||||
Sbjct: 55030 tccgcctccgcccccaatcccca 55052
to top
>gb|AC005866.4| Homo sapiens 12 BAC RP11-407G6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 119388

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 67    tcccatccgacctttaaatccct 89
             ||||||| |||||||||||||||
Sbjct: 54625 tcccatctgacctttaaatccct 54603
to top
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
              complete sequence
          Length = 120392

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     gccccaaatccccatctcg 41
              |||||||||||||||||||
Sbjct: 109226 gccccaaatccccatctcg 109208
to top
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    gccccaaatccccatctcg 41
             |||||||||||||||||||
Sbjct: 79890 gccccaaatccccatctcg 79872
to top
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0493C11
          Length = 143113

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 100    tactcgccgccgccgccgg 118
              |||||||||||||||||||
Sbjct: 102427 tactcgccgccgccgccgg 102445
to top
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0554A06
          Length = 165311

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 99     ctactcgccgccgccgccg 117
              |||||||||||||||||||
Sbjct: 104952 ctactcgccgccgccgccg 104934
to top
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0679C08
          Length = 156266

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 100   tactcgccgccgccgccgg 118
             |||||||||||||||||||
Sbjct: 24405 tactcgccgccgccgccgg 24423
to top
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0030H07
          Length = 168253

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 102   ctcgccgccgccgccggaa 120
             |||||||||||||||||||
Sbjct: 16372 ctcgccgccgccgccggaa 16390
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>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0009G03
          Length = 163526

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    ctcgccgccgccgccggaa 120
              |||||||||||||||||||
Sbjct: 115051 ctcgccgccgccgccggaa 115069
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>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1134_F06
          Length = 130968

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 100   tactcgccgccgccgccgg 118
             |||||||||||||||||||
Sbjct: 71895 tactcgccgccgccgccgg 71913
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>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_D06
          Length = 102239

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 87    cctacgctactactactcgccgccgccgccg 117
             ||||| ||||| || ||||||||||||||||
Sbjct: 60507 cctactctactcctcctcgccgccgccgccg 60537
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>gb|AE005089.1| Halobacterium sp. NRC-1 section 120 of 170 of the complete genome
          Length = 11224

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 103  tcgccgccgccgccggaac 121
            |||||||||||||||||||
Sbjct: 9430 tcgccgccgccgccggaac 9448
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>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0090H18
          Length = 174842

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 100   tactcgccgccgccgccgg 118
             |||||||||||||||||||
Sbjct: 16420 tactcgccgccgccgccgg 16438
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>dbj|AK119784.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F05, full
            insert sequence
          Length = 1774

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 100  tactcgccgccgccgccgg 118
            |||||||||||||||||||
Sbjct: 1031 tactcgccgccgccgccgg 1013
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>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0477F03
          Length = 176120

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    gccccaaatccccatctcg 41
             |||||||||||||||||||
Sbjct: 96370 gccccaaatccccatctcg 96352
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>dbj|AK120917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034L01, full
           insert sequence
          Length = 646

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 87  cctacgctactactactcgccgccgccgccg 117
           ||||| ||||| || ||||||||||||||||
Sbjct: 41  cctactctactcctcctcgccgccgccgccg 11
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>dbj|AK110646.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-D06, full
           insert sequence
          Length = 935

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 23  gccccaaatccccatctcg 41
           |||||||||||||||||||
Sbjct: 218 gccccaaatccccatctcg 236
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>ref|XM_311412.2| Anopheles gambiae str. PEST ENSANGP00000016830
           (ENSANGG00000014341), partial mRNA
          Length = 550

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 cgccgccgccgccggaacc 122
           |||||||||||||||||||
Sbjct: 391 cgccgccgccgccggaacc 373
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>dbj|AK109202.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C04, full
           insert sequence
          Length = 567

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 99  ctactcgccgccgccgccg 117
           |||||||||||||||||||
Sbjct: 180 ctactcgccgccgccgccg 162
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>dbj|AK103666.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135J23, full
           insert sequence
          Length = 4488

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 102 ctcgccgccgccgccggaa 120
           |||||||||||||||||||
Sbjct: 64  ctcgccgccgccgccggaa 82
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>dbj|AK099954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124D06, full
           insert sequence
          Length = 782

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 23  gccccaaatccccatctcg 41
           |||||||||||||||||||
Sbjct: 504 gccccaaatccccatctcg 486
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>dbj|AK066014.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049M21, full
           insert sequence
          Length = 3416

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                          
Query: 93  ctactactact-cgccgccgccgccggaacc 122
           ||||||||||| | |||||||||||||||||
Sbjct: 339 ctactactactaccccgccgccgccggaacc 369
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>dbj|AK062952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-C09, full
           insert sequence
          Length = 1672

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 tactcgccgccgccgccgg 118
           |||||||||||||||||||
Sbjct: 934 tactcgccgccgccgccgg 916
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>dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0031C24
          Length = 194111

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    gccccaaatccccatctcg 41
             |||||||||||||||||||
Sbjct: 43979 gccccaaatccccatctcg 43997
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>dbj|AP003805.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1080_F08
          Length = 94139

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    gccccaaatccccatctcg 41
             |||||||||||||||||||
Sbjct: 88974 gccccaaatccccatctcg 88992
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>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete
             sequence
          Length = 112897

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   cgccgccgccgccggaacc 122
             |||||||||||||||||||
Sbjct: 88036 cgccgccgccgccggaacc 88054
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>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                            
Query: 93    ctactactact-cgccgccgccgccggaacc 122
             ||||||||||| | |||||||||||||||||
Sbjct: 27237 ctactactactaccccgccgccgccggaacc 27267
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>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete
            sequence
          Length = 82895

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 104  cgccgccgccgccggaacc 122
            |||||||||||||||||||
Sbjct: 1863 cgccgccgccgccggaacc 1881
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>gb|AC105906.21| Mus musculus chromosome 7, clone RP24-81O24, complete sequence
          Length = 213004

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 179   cccctgacccccatgccct 197
             |||||||||||||||||||
Sbjct: 18675 cccctgacccccatgccct 18693
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>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
             complete sequence
          Length = 145391

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                            
Query: 93    ctactactact-cgccgccgccgccggaacc 122
             ||||||||||| | |||||||||||||||||
Sbjct: 53137 ctactactactaccccgccgccgccggaacc 53167
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>gb|AC148985.4| Mus musculus BAC clone RP23-124O21 from chromosome 7, complete sequence
          Length = 190473

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 179    cccctgacccccatgccct 197
              |||||||||||||||||||
Sbjct: 146753 cccctgacccccatgccct 146735
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>gb|L08425.1|MZEABP1X Zea mays auxin-binding protein (abp1) gene, exons 1-5 and complete
            cds
          Length = 5574

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 101  actcgccgccgccgccgga 119
            |||||||||||||||||||
Sbjct: 1261 actcgccgccgccgccgga 1279


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,859,464
Number of Sequences: 3902068
Number of extensions: 1859464
Number of successful extensions: 336191
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 324937
Number of HSP's gapped (non-prelim): 11259
length of query: 197
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 175
effective length of database: 17,147,199,772
effective search space: 3000759960100
effective search space used: 3000759960100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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