ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl20c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome... 170 3e-39
2gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome... 170 3e-39
3gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic seque... 170 3e-39
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 170 3e-39
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
6emb|CT485992.1| S.lycopersicum DNA sequence from clone LE_HBa-31... 54 4e-04
7gb|AC137517.6| Homo sapiens 3 BAC RP11-671N3 (Roswell Park Cance... 42 1.7
8ref|NM_105153.3| Arabidopsis thaliana unknown protein AT1G64790 ... 40 6.6
9ref|NM_001036815.1| Arabidopsis thaliana unknown protein AT5G164... 40 6.6
10ref|XM_640841.1| Dictyostelium discoideum hypothetical protein (... 40 6.6
11gb|AC150242.3| Rhinolophus ferrumequinum clone VMRC7-331J24, com... 40 6.6
12gb|AC117644.6| Mus musculus chromosome 7, clone RP23-238L7, comp... 40 6.6
13emb|AL591423.6| Human DNA sequence from clone RP11-134P18 on chr... 40 6.6
14emb|AL390246.17| Human DNA sequence from clone RP11-490C5 on chr... 40 6.6
15gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 40 6.6
16gb|AC155227.3| Rhinolophus ferrumequinum clone VMRC7-4K1, comple... 40 6.6
17gb|AC105021.6| Homo sapiens chromosome 17, clone CTD-2033D24, co... 40 6.6
18dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
20gb|AC011701.22|AC011701 Homo sapiens 12 BAC RP11-937I21 (Roswell... 40 6.6
21gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 6.6
22gb|AC009837.13| Homo sapiens chromosome 17, clone RP11-550K23, c... 40 6.6
23gb|AC006193.3|AC006193 Arabidopsis thaliana chromosome I BAC F13... 40 6.6
24dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 6.6
25emb|BX470215.5| Mouse DNA sequence from clone RP24-558L5 on chro... 40 6.6
26dbj|AB005242.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.6
27gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
28gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
29emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa... 40 6.6
30emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.6
31emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.6
32gb|AC145949.3| Gallus gallus BAC clone CH261-29A22 from chromoso... 40 6.6
33emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chr... 40 6.6 
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
            OSJNBa0031O09, complete sequence
          Length = 161339

 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Plus

                                                                        
Query: 136  ggctgatcataatctggacgtttgcggtagaatgattaatgctggcatccttattattga 195
            |||||||| |||| |||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 5152 ggctgatcctaatgtggacgttcgtggtagaatgattaatgctggaatccttattattga 5211

                                                                        
Query: 196  taaacatggaaaggaaaatgttcctttgctgcttcctatttttgagagctacttgaataa 255
            ||||||||||||||||||||| |||||| || |||||||||| |||||||||||||||||
Sbjct: 5212 taaacatggaaaggaaaatgtccctttgttgtttcctattttcgagagctacttgaataa 5271

              
Query: 256  aa 257
            ||
Sbjct: 5272 aa 5273



 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                        
Query: 337  agtgttgttgagaagttgctagatgttcttaacaccccatcagaggcagttcagagaccg 396
            |||||||||||||||||| ||||||| || ||||||||||| ||||||||||| ||  | 
Sbjct: 6722 agtgttgttgagaagttgttagatgtcctgaacaccccatcggaggcagttcaaagggct 6781

                                                        
Query: 397  gtgtcagactgtctgtctccacttatgctctcaaagcaggtgag 440
            |||||||||||| | |||||||||||| ||||||| || |||||
Sbjct: 6782 gtgtcagactgtttatctccacttatggtctcaaaacaagtgag 6825



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 107/127 (84%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   gttgaatttggagatacaaactggctcggaagacagggtattgcatta-ccctccactca 70
            |||||||||||||||| | | ||||| |||||||||||| |||||||| ||||||| || 
Sbjct: 4940 gttgaatttggagatatacattggcttggaagacagggtgttgcattagccctccattcg 4999

                                                                        
Query: 71   gttgcagatgctttaagttctaaagatcttcccattgccatgacatttcctatatcacgt 130
             ||||||||| |||  ||||||| ||||||||  |||  ||||||||||  |||||||||
Sbjct: 5000 cttgcagatgttttgggttctaaggatcttcctgttgttatgacatttctcatatcacgt 5059

                   
Query: 131  ggcttgg 137
            | |||||
Sbjct: 5060 gccttgg 5066



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/70 (88%), Gaps = 2/70 (2%)
 Strand = Plus / Plus

                                                                        
Query: 267  atgaggaaacatgtgatcttgtcagggaaggcgttgttatat--actggtgctctagcaa 324
            ||||||||| || |||||||||||||||||| ||||| ||||  ||||||||||| ||||
Sbjct: 6515 atgaggaaaaatatgatcttgtcagggaaggtgttgtgatattcactggtgctcttgcaa 6574

                      
Query: 325  aacatctatc 334
            | ||||||||
Sbjct: 6575 agcatctatc 6584
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>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map
              near C10769, complete sequence
          Length = 194856

 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                          
Query: 136    ggctgatcataatctggacgtttgcggtagaatgattaatgctggcatccttattattga 195
              |||||||| |||| |||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 174282 ggctgatcctaatgtggacgttcgtggtagaatgattaatgctggaatccttattattga 174223

                                                                          
Query: 196    taaacatggaaaggaaaatgttcctttgctgcttcctatttttgagagctacttgaataa 255
              ||||||||||||||||||||| |||||| || |||||||||| |||||||||||||||||
Sbjct: 174222 taaacatggaaaggaaaatgtccctttgttgtttcctattttcgagagctacttgaataa 174163

                
Query: 256    aa 257
              ||
Sbjct: 174162 aa 174161



 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Minus

                                                                          
Query: 337    agtgttgttgagaagttgctagatgttcttaacaccccatcagaggcagttcagagaccg 396
              |||||||||||||||||| ||||||| || ||||||||||| ||||||||||| ||  | 
Sbjct: 172712 agtgttgttgagaagttgttagatgtcctgaacaccccatcggaggcagttcaaagggct 172653

                                                          
Query: 397    gtgtcagactgtctgtctccacttatgctctcaaagcaggtgag 440
              |||||||||||| | |||||||||||| ||||||| || |||||
Sbjct: 172652 gtgtcagactgtttatctccacttatggtctcaaaacaagtgag 172609



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 107/127 (84%), Gaps = 1/127 (0%)
 Strand = Plus / Minus

                                                                          
Query: 12     gttgaatttggagatacaaactggctcggaagacagggtattgcatta-ccctccactca 70
              |||||||||||||||| | | ||||| |||||||||||| |||||||| ||||||| || 
Sbjct: 174494 gttgaatttggagatatacattggcttggaagacagggtgttgcattagccctccattcg 174435

                                                                          
Query: 71     gttgcagatgctttaagttctaaagatcttcccattgccatgacatttcctatatcacgt 130
               ||||||||| |||  ||||||| ||||||||  |||  ||||||||||  |||||||||
Sbjct: 174434 cttgcagatgttttgggttctaaggatcttcctgttgttatgacatttctcatatcacgt 174375

                     
Query: 131    ggcttgg 137
              | |||||
Sbjct: 174374 gccttgg 174368



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/70 (88%), Gaps = 2/70 (2%)
 Strand = Plus / Minus

                                                                          
Query: 267    atgaggaaacatgtgatcttgtcagggaaggcgttgttatat--actggtgctctagcaa 324
              ||||||||| || |||||||||||||||||| ||||| ||||  ||||||||||| ||||
Sbjct: 172919 atgaggaaaaatatgatcttgtcagggaaggtgttgtgatattcactggtgctcttgcaa 172860

                        
Query: 325    aacatctatc 334
              | ||||||||
Sbjct: 172859 agcatctatc 172850
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>gb|AC147426.2| Oryza sativa chromosome 3  B1377B10 genomic sequence, complete sequence
          Length = 184366

 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Plus

                                                                          
Query: 136    ggctgatcataatctggacgtttgcggtagaatgattaatgctggcatccttattattga 195
              |||||||| |||| |||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 148304 ggctgatcctaatgtggacgttcgtggtagaatgattaatgctggaatccttattattga 148363

                                                                          
Query: 196    taaacatggaaaggaaaatgttcctttgctgcttcctatttttgagagctacttgaataa 255
              ||||||||||||||||||||| |||||| || |||||||||| |||||||||||||||||
Sbjct: 148364 taaacatggaaaggaaaatgtccctttgttgtttcctattttcgagagctacttgaataa 148423

                
Query: 256    aa 257
              ||
Sbjct: 148424 aa 148425



 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                          
Query: 337    agtgttgttgagaagttgctagatgttcttaacaccccatcagaggcagttcagagaccg 396
              |||||||||||||||||| ||||||| || ||||||||||| ||||||||||| ||  | 
Sbjct: 149874 agtgttgttgagaagttgttagatgtcctgaacaccccatcggaggcagttcaaagggct 149933

                                                          
Query: 397    gtgtcagactgtctgtctccacttatgctctcaaagcaggtgag 440
              |||||||||||| | |||||||||||| ||||||| || |||||
Sbjct: 149934 gtgtcagactgtttatctccacttatggtctcaaaacaagtgag 149977



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 107/127 (84%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                          
Query: 12     gttgaatttggagatacaaactggctcggaagacagggtattgcatta-ccctccactca 70
              |||||||||||||||| | | ||||| |||||||||||| |||||||| ||||||| || 
Sbjct: 148092 gttgaatttggagatatacattggcttggaagacagggtgttgcattagccctccattcg 148151

                                                                          
Query: 71     gttgcagatgctttaagttctaaagatcttcccattgccatgacatttcctatatcacgt 130
               ||||||||| |||  ||||||| ||||||||  |||  ||||||||||  |||||||||
Sbjct: 148152 cttgcagatgttttgggttctaaggatcttcctgttgttatgacatttctcatatcacgt 148211

                     
Query: 131    ggcttgg 137
              | |||||
Sbjct: 148212 gccttgg 148218



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/70 (88%), Gaps = 2/70 (2%)
 Strand = Plus / Plus

                                                                          
Query: 267    atgaggaaacatgtgatcttgtcagggaaggcgttgttatat--actggtgctctagcaa 324
              ||||||||| || |||||||||||||||||| ||||| ||||  ||||||||||| ||||
Sbjct: 149667 atgaggaaaaatatgatcttgtcagggaaggtgttgtgatattcactggtgctcttgcaa 149726

                        
Query: 325    aacatctatc 334
              | ||||||||
Sbjct: 149727 agcatctatc 149736
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Plus

                                                                            
Query: 136      ggctgatcataatctggacgtttgcggtagaatgattaatgctggcatccttattattga 195
                |||||||| |||| |||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 28965009 ggctgatcctaatgtggacgttcgtggtagaatgattaatgctggaatccttattattga 28965068

                                                                            
Query: 196      taaacatggaaaggaaaatgttcctttgctgcttcctatttttgagagctacttgaataa 255
                ||||||||||||||||||||| |||||| || |||||||||| |||||||||||||||||
Sbjct: 28965069 taaacatggaaaggaaaatgtccctttgttgtttcctattttcgagagctacttgaataa 28965128

                  
Query: 256      aa 257
                ||
Sbjct: 28965129 aa 28965130



 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                            
Query: 337      agtgttgttgagaagttgctagatgttcttaacaccccatcagaggcagttcagagaccg 396
                |||||||||||||||||| ||||||| || ||||||||||| ||||||||||| ||  | 
Sbjct: 28966579 agtgttgttgagaagttgttagatgtcctgaacaccccatcggaggcagttcaaagggct 28966638

                                                            
Query: 397      gtgtcagactgtctgtctccacttatgctctcaaagcaggtgag 440
                |||||||||||| | |||||||||||| ||||||| || |||||
Sbjct: 28966639 gtgtcagactgtttatctccacttatggtctcaaaacaagtgag 28966682



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 107/127 (84%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                            
Query: 12       gttgaatttggagatacaaactggctcggaagacagggtattgcatta-ccctccactca 70
                |||||||||||||||| | | ||||| |||||||||||| |||||||| ||||||| || 
Sbjct: 28964797 gttgaatttggagatatacattggcttggaagacagggtgttgcattagccctccattcg 28964856

                                                                            
Query: 71       gttgcagatgctttaagttctaaagatcttcccattgccatgacatttcctatatcacgt 130
                 ||||||||| |||  ||||||| ||||||||  |||  ||||||||||  |||||||||
Sbjct: 28964857 cttgcagatgttttgggttctaaggatcttcctgttgttatgacatttctcatatcacgt 28964916

                       
Query: 131      ggcttgg 137
                | |||||
Sbjct: 28964917 gccttgg 28964923



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/70 (88%), Gaps = 2/70 (2%)
 Strand = Plus / Plus

                                                                            
Query: 267      atgaggaaacatgtgatcttgtcagggaaggcgttgttatat--actggtgctctagcaa 324
                ||||||||| || |||||||||||||||||| ||||| ||||  ||||||||||| ||||
Sbjct: 28966372 atgaggaaaaatatgatcttgtcagggaaggtgttgtgatattcactggtgctcttgcaa 28966431

                          
Query: 325      aacatctatc 334
                | ||||||||
Sbjct: 28966432 agcatctatc 28966441
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Plus

                                                                            
Query: 136      ggctgatcataatctggacgtttgcggtagaatgattaatgctggcatccttattattga 195
                |||||||| |||| |||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 29056431 ggctgatcctaatgtggacgttcgtggtagaatgattaatgctggaatccttattattga 29056490

                                                                            
Query: 196      taaacatggaaaggaaaatgttcctttgctgcttcctatttttgagagctacttgaataa 255
                ||||||||||||||||||||| |||||| || |||||||||| |||||||||||||||||
Sbjct: 29056491 taaacatggaaaggaaaatgtccctttgttgtttcctattttcgagagctacttgaataa 29056550

                  
Query: 256      aa 257
                ||
Sbjct: 29056551 aa 29056552



 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                            
Query: 337      agtgttgttgagaagttgctagatgttcttaacaccccatcagaggcagttcagagaccg 396
                |||||||||||||||||| ||||||| || ||||||||||| ||||||||||| ||  | 
Sbjct: 29058001 agtgttgttgagaagttgttagatgtcctgaacaccccatcggaggcagttcaaagggct 29058060

                                                            
Query: 397      gtgtcagactgtctgtctccacttatgctctcaaagcaggtgag 440
                |||||||||||| | |||||||||||| ||||||| || |||||
Sbjct: 29058061 gtgtcagactgtttatctccacttatggtctcaaaacaagtgag 29058104



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 107/127 (84%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                            
Query: 12       gttgaatttggagatacaaactggctcggaagacagggtattgcatta-ccctccactca 70
                |||||||||||||||| | | ||||| |||||||||||| |||||||| ||||||| || 
Sbjct: 29056219 gttgaatttggagatatacattggcttggaagacagggtgttgcattagccctccattcg 29056278

                                                                            
Query: 71       gttgcagatgctttaagttctaaagatcttcccattgccatgacatttcctatatcacgt 130
                 ||||||||| |||  ||||||| ||||||||  |||  ||||||||||  |||||||||
Sbjct: 29056279 cttgcagatgttttgggttctaaggatcttcctgttgttatgacatttctcatatcacgt 29056338

                       
Query: 131      ggcttgg 137
                | |||||
Sbjct: 29056339 gccttgg 29056345



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/70 (88%), Gaps = 2/70 (2%)
 Strand = Plus / Plus

                                                                            
Query: 267      atgaggaaacatgtgatcttgtcagggaaggcgttgttatat--actggtgctctagcaa 324
                ||||||||| || |||||||||||||||||| ||||| ||||  ||||||||||| ||||
Sbjct: 29057794 atgaggaaaaatatgatcttgtcagggaaggtgttgtgatattcactggtgctcttgcaa 29057853

                          
Query: 325      aacatctatc 334
                | ||||||||
Sbjct: 29057854 agcatctatc 29057863
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>emb|CT485992.1| S.lycopersicum DNA sequence from clone LE_HBa-31H5 on chromosome 4,
              complete sequence
          Length = 164164

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 164    agaatgattaatgctggcatccttattattgataaacatggaa 206
              |||||||| |||||||||||  |||||||||| ||||||||||
Sbjct: 100582 agaatgatcaatgctggcatagttattattgacaaacatggaa 100540
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>gb|AC137517.6| Homo sapiens 3 BAC RP11-671N3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 105622

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 196   taaacatggaaaggaaaatgttcctttgc 224
             |||| ||||||||||||||||| ||||||
Sbjct: 59716 taaaaatggaaaggaaaatgtttctttgc 59688
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>ref|NM_105153.3| Arabidopsis thaliana unknown protein AT1G64790 mRNA, complete cds
          Length = 7618

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                        
Query: 167  atgattaatgctggcatccttattattgataaacatggaaaggaaaatgttcctttgctg 226
            ||||| |||||||| ||| | ||||||||||| ||||| || ||||| ||| | ||||||
Sbjct: 3142 atgatcaatgctggtatcatgattattgataagcatggcaaagaaaacgtttcattgctg 3201
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>ref|NM_001036815.1| Arabidopsis thaliana unknown protein AT5G16486 mRNA, complete cds
          Length = 630

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 68  tcagttgcagatgctttaag 87
           ||||||||||||||||||||
Sbjct: 199 tcagttgcagatgctttaag 218
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>ref|XM_640841.1| Dictyostelium discoideum hypothetical protein (DDB0190229), partial
           mRNA
          Length = 429

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 ttattattgataaacatgga 205
           ||||||||||||||||||||
Sbjct: 350 ttattattgataaacatgga 369
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>gb|AC150242.3| Rhinolophus ferrumequinum clone VMRC7-331J24, complete sequence
          Length = 120894

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 214   tgttcctttgctgcttcctatttt 237
             |||||||||||||||||| |||||
Sbjct: 66320 tgttcctttgctgcttccaatttt 66343
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>gb|AC117644.6| Mus musculus chromosome 7, clone RP23-238L7, complete sequence
          Length = 217015

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    aacatggaaaggaaaatgtt 217
              ||||||||||||||||||||
Sbjct: 153189 aacatggaaaggaaaatgtt 153170
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>emb|AL591423.6| Human DNA sequence from clone RP11-134P18 on chromosome 9 Contains a
             novel gene, the 5' end of a novel gene and a CpG island,
             complete sequence
          Length = 54193

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   ataaacatggaaaggaaaat 214
             ||||||||||||||||||||
Sbjct: 17729 ataaacatggaaaggaaaat 17710
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>emb|AL390246.17| Human DNA sequence from clone RP11-490C5 on chromosome 9 Contains a
             ribosomal protein L7 (RPL7) pseudogene and a CpG island,
             complete sequence
          Length = 103750

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ctttgctgcttcctattttt 238
             ||||||||||||||||||||
Sbjct: 77454 ctttgctgcttcctattttt 77435
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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 217     tcctttgctgcttcctattt 236
               ||||||||||||||||||||
Sbjct: 1069039 tcctttgctgcttcctattt 1069020
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>gb|AC155227.3| Rhinolophus ferrumequinum clone VMRC7-4K1, complete sequence
          Length = 160979

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 214   tgttcctttgctgcttcctatttt 237
             |||||||||||||||||| |||||
Sbjct: 14725 tgttcctttgctgcttccaatttt 14748
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>gb|AC105021.6| Homo sapiens chromosome 17, clone CTD-2033D24, complete sequence
          Length = 143552

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    aaggaaaatgttcctttgct 225
              ||||||||||||||||||||
Sbjct: 126609 aaggaaaatgttcctttgct 126628
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
             complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   aaaatgttcctttgctgctt 229
             ||||||||||||||||||||
Sbjct: 50799 aaaatgttcctttgctgctt 50780
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
             complete sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   aaaatgttcctttgctgctt 229
             ||||||||||||||||||||
Sbjct: 52387 aaaatgttcctttgctgctt 52368
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>gb|AC011701.22|AC011701 Homo sapiens 12 BAC RP11-937I21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 205510

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    ataaacatggaaaggaaaat 214
              ||||||||||||||||||||
Sbjct: 128087 ataaacatggaaaggaaaat 128106
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 214     tgttcctttgctgcttcctatttt 237
               |||||||||||||||||| |||||
Sbjct: 1347393 tgttcctttgctgcttccaatttt 1347416
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>gb|AC009837.13| Homo sapiens chromosome 17, clone RP11-550K23, complete sequence
          Length = 168509

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   aaggaaaatgttcctttgct 225
             ||||||||||||||||||||
Sbjct: 29528 aaggaaaatgttcctttgct 29547
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>gb|AC006193.3|AC006193 Arabidopsis thaliana chromosome I BAC F13O11 genomic sequence, complete
             sequence
          Length = 118335

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 167   atgattaatgctggcatccttattattgataaacatggaaaggaaaatgttcctttgctg 226
             ||||| |||||||| ||| | ||||||||||| ||||| || ||||| ||| | ||||||
Sbjct: 38565 atgatcaatgctggtatcatgattattgataagcatggcaaagaaaacgtttcattgctg 38506
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 421     atgctctcaaagcaggtgag 440
               ||||||||||||||||||||
Sbjct: 3391868 atgctctcaaagcaggtgag 3391887
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>emb|BX470215.5| Mouse DNA sequence from clone RP24-558L5 on chromosome X, complete
             sequence
          Length = 137502

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   tttgctgcttcctatttttg 239
             ||||||||||||||||||||
Sbjct: 42372 tttgctgcttcctatttttg 42391
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>dbj|AB005242.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQK4
          Length = 82001

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcagttgcagatgctttaag 87
             ||||||||||||||||||||
Sbjct: 50740 tcagttgcagatgctttaag 50721
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   aaaatgttcctttgctgctt 229
             ||||||||||||||||||||
Sbjct: 52387 aaaatgttcctttgctgctt 52368
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   aaaatgttcctttgctgctt 229
             ||||||||||||||||||||
Sbjct: 50799 aaaatgttcctttgctgctt 50780
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>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 147503

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   aaaatgttcctttgctgctt 229
             ||||||||||||||||||||
Sbjct: 52387 aaaatgttcctttgctgctt 52368
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>emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb0077A02 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131346

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   aaaatgttcctttgctgctt 229
             ||||||||||||||||||||
Sbjct: 50799 aaaatgttcctttgctgctt 50780
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>emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa0096E03 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 161808

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  aaaatgttcctttgctgctt 229
            ||||||||||||||||||||
Sbjct: 2408 aaaatgttcctttgctgctt 2389
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>gb|AC145949.3| Gallus gallus BAC clone CH261-29A22 from chromosome unknown, complete
             sequence
          Length = 172543

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   gaatgattaatgctggcatc 184
             ||||||||||||||||||||
Sbjct: 88666 gaatgattaatgctggcatc 88647
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>emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chromosome 11, complete
             sequence
          Length = 187006

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   acatggaaaggaaaatgttc 218
             ||||||||||||||||||||
Sbjct: 18091 acatggaaaggaaaatgttc 18072


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,777,719
Number of Sequences: 3902068
Number of extensions: 4777719
Number of successful extensions: 98761
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98484
Number of HSP's gapped (non-prelim): 272
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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