ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl20c08 |
|---|---|
| Clone Library Name | barley_pub |
>AP2B1_RAT (P62944) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 128 bits (322), Expect = 6e-30 Identities = 64/76 (84%), Positives = 71/76 (93%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 410 DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNCMQT+N Sbjct: 3 DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDN 62 Query: 411 LELKKLVYLYLINYAK 458 LELKKLVYLYL+NYAK Sbjct: 63 LELKKLVYLYLMNYAK 78
>AP2B1_MOUSE (Q9DBG3) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 128 bits (322), Expect = 6e-30 Identities = 64/76 (84%), Positives = 71/76 (93%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 410 DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNCMQT+N Sbjct: 3 DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDN 62 Query: 411 LELKKLVYLYLINYAK 458 LELKKLVYLYL+NYAK Sbjct: 63 LELKKLVYLYLMNYAK 78
>AP2B1_HUMAN (P63010) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 128 bits (322), Expect = 6e-30 Identities = 64/76 (84%), Positives = 71/76 (93%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 410 DSKYF+T KKGEI ELK ELN++ K+KRK+AVKKVIAAMTVGKDVSSLF DVVNCMQT+N Sbjct: 3 DSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDN 62 Query: 411 LELKKLVYLYLINYAK 458 LELKKLVYLYL+NYAK Sbjct: 63 LELKKLVYLYLMNYAK 78
>AP1B1_RAT (P52303) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta large Length = 949 Score = 127 bits (319), Expect = 1e-29 Identities = 63/76 (82%), Positives = 71/76 (93%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 410 DSKYF+TTKKGEI ELK ELNS K+K+K+AVKKVIA+MTVGKDVS+LF DVVNCMQT+N Sbjct: 3 DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62 Query: 411 LELKKLVYLYLINYAK 458 LELKKLVYLYL+NYAK Sbjct: 63 LELKKLVYLYLMNYAK 78
>AP1B1_HUMAN (Q10567) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta larg Length = 949 Score = 127 bits (319), Expect = 1e-29 Identities = 63/76 (82%), Positives = 71/76 (93%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 410 DSKYF+TTKKGEI ELK ELNS K+K+K+AVKKVIA+MTVGKDVS+LF DVVNCMQT+N Sbjct: 3 DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62 Query: 411 LELKKLVYLYLINYAK 458 LELKKLVYLYL+NYAK Sbjct: 63 LELKKLVYLYLMNYAK 78
>AP1B1_MOUSE (O35643) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta larg Length = 943 Score = 127 bits (319), Expect = 1e-29 Identities = 63/76 (82%), Positives = 71/76 (93%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 410 DSKYF+TTKKGEI ELK ELNS K+K+K+AVKKVIA+MTVGKDVS+LF DVVNCMQT+N Sbjct: 3 DSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62 Query: 411 LELKKLVYLYLINYAK 458 LELKKLVYLYL+NYAK Sbjct: 63 LELKKLVYLYLMNYAK 78
>AP1B1_SCHPO (O43079) AP-1 complex subunit beta-1 (Beta(1)-adaptin) (Clathrin| assembly protein large beta-1 chain) (Clathrin assembly protein complex 1 beta-1 large chain) Length = 683 Score = 87.4 bits (215), Expect = 2e-17 Identities = 47/75 (62%), Positives = 55/75 (73%) Frame = +3 Query: 234 SKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENL 413 S F KK E EL++ L SQY +R DAVK+ IAAMTVGKDVSSLF DV+ + T ++ Sbjct: 8 SSRFKAFKKSETSELQKGLVSQYAYERIDAVKRTIAAMTVGKDVSSLFPDVLKNLATRDI 67 Query: 414 ELKKLVYLYLINYAK 458 LKKLVYLYLINYAK Sbjct: 68 TLKKLVYLYLINYAK 82
>AP2B1_BOVIN (P63009) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) (Fragment) Length = 236 Score = 87.0 bits (214), Expect = 2e-17 Identities = 43/46 (93%), Positives = 45/46 (97%) Frame = +3 Query: 321 AVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAK 458 AVKKVIAAMTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAK Sbjct: 1 AVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAK 46
>AP1B1_YEAST (P36000) AP-1 complex subunit beta-1 (Beta(1)-adaptin) (Clathrin| assembly protein large beta-1 chain) (Clathrin assembly protein complex 1 beta-1 large chain) Length = 726 Score = 79.7 bits (195), Expect = 3e-15 Identities = 40/67 (59%), Positives = 51/67 (76%) Frame = +3 Query: 258 KGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYL 437 KGE+ EL+ L SQY RKDA+KK I MT+GKDVSSLF DV+ + T ++E KKLVYL Sbjct: 25 KGELSELRTGLVSQYPQTRKDAIKKTIQQMTLGKDVSSLFPDVLKNIATIDVEQKKLVYL 84 Query: 438 YLINYAK 458 Y++NYA+ Sbjct: 85 YVMNYAE 91
>AP3B1_CANFA (Q7YRF1) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1091 Score = 62.8 bits (151), Expect = 4e-10 Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 1/98 (1%) Frame = +3 Query: 168 AGGGDRCVFGR*ARRG-DMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAA 344 AGGG+ G+ A SG + S KK E +LK+ L S + DA+K+++ Sbjct: 12 AGGGEATELGQEATSTVSPSGAFGLFSSDLKKNE--DLKQMLESNKDSAKLDAMKRIVGM 69 Query: 345 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAK 458 + GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Sbjct: 70 IAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAE 107
>AP3B1_MOUSE (Q9Z1T1) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1105 Score = 61.6 bits (148), Expect = 9e-10 Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 1/98 (1%) Frame = +3 Query: 168 AGGGDRCVFGR*ARRG-DMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAA 344 +GGG+ G+ A SG + S KK E +LK+ L S + DA+K+++ Sbjct: 12 SGGGEAAELGQEATSTISPSGAFGLFSSDWKKNE--DLKQMLESNKDSAKLDAMKRIVGM 69 Query: 345 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAK 458 + GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Sbjct: 70 IAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAE 107
>AP3B1_HUMAN (O00203) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1094 Score = 61.6 bits (148), Expect = 9e-10 Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 1/98 (1%) Frame = +3 Query: 168 AGGGDRCVFGR*ARRG-DMSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAA 344 +GGG+ G+ A SG + S KK E +LK+ L S + DA+K+++ Sbjct: 12 SGGGEATELGQEATSTISPSGAFGLFSSDLKKNE--DLKQMLESNKDSAKLDAMKRIVGM 69 Query: 345 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAK 458 + GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Sbjct: 70 IAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAE 107
>AP2B_SCHPO (O43005) AP-2 complex subunit beta (Beta-adaptin) (Clathrin| assembly protein large beta chain) (Clathrin assembly protein complex 2 beta large chain) Length = 677 Score = 60.8 bits (146), Expect = 2e-09 Identities = 32/74 (43%), Positives = 46/74 (62%) Frame = +3 Query: 234 SKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENL 413 S +FS+T + + + +KR A+KK IA ++ G D+SSLF V++ M++ NL Sbjct: 5 SSHFSSTAADLLAVFSSDNKDKSANKRISALKKAIAGISYGYDMSSLFPSVISSMESNNL 64 Query: 414 ELKKLVYLYLINYA 455 ELKKL YLYL YA Sbjct: 65 ELKKLCYLYLKIYA 78
>AP3B2_MOUSE (Q9JME5) AP-3 complex subunit beta-2 (Adapter-related protein| complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein complex AP-3 beta-2 subunit) (Clathrin assembly protein complex 3 beta-2 large chain) Length = 1082 Score = 55.1 bits (131), Expect = 9e-08 Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 3/81 (3%) Frame = +3 Query: 225 GHDSK---YFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 395 GHD FS+ K +LKE L++ + +A+K+++A + GK+ S LF VV Sbjct: 23 GHDPASGGIFSSDYKRH-DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKN 81 Query: 396 MQTENLELKKLVYLYLINYAK 458 + +N+E+KKLVY+YL+ YA+ Sbjct: 82 VACKNIEVKKLVYVYLVRYAE 102
>AP3B2_HUMAN (Q13367) AP-3 complex subunit beta-2 (Adapter-related protein| complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein complex AP-3 beta-2 subunit) (AP-3 complex beta-2 subunit) (Clathrin assembly protein complex 3 beta-2 large chain) (Neu Length = 1082 Score = 55.1 bits (131), Expect = 9e-08 Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 3/81 (3%) Frame = +3 Query: 225 GHDSK---YFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNC 395 GHD FS+ K +LKE L++ + +A+K+++A + GK+ S LF VV Sbjct: 23 GHDPASGGIFSSDYKRH-DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKN 81 Query: 396 MQTENLELKKLVYLYLINYAK 458 + +N+E+KKLVY+YL+ YA+ Sbjct: 82 VACKNIEVKKLVYVYLVRYAE 102
>AP3B_SCHPO (O13939) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related| protein complex 3 beta subunit) (Clathrin assembly protein large beta chain) (Clathrin assembly protein complex 3 beta large chain) Length = 745 Score = 46.2 bits (108), Expect = 4e-05 Identities = 22/62 (35%), Positives = 40/62 (64%) Frame = +3 Query: 273 ELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINY 452 +L LNS + +A+ ++A M G+++S F DVV + +EN E+++LV++YL+ Y Sbjct: 37 DLLRLLNSNSDAGKLEAINFILAQMMHGENMSLYFPDVVKLVASENPEIRRLVHIYLLQY 96 Query: 453 AK 458 A+ Sbjct: 97 AE 98
>AP3B_ASHGO (Q759E2) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related| protein complex 3 beta subunit) (Clathrin assembly protein large beta chain) (Clathrin assembly protein complex 3 beta large chain) Length = 781 Score = 43.9 bits (102), Expect = 2e-04 Identities = 22/79 (27%), Positives = 49/79 (62%), Gaps = 3/79 (3%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGK---DVSSLFTDVVNCMQ 401 +S YF +K + L LNS+Y + +D +K+V++ M G ++ + F D+V + Sbjct: 32 ESSYFHYSKSIDSESLPGLLNSRYTREVRDGMKRVMSLMGSGDSSIELETHFADIVKNIG 91 Query: 402 TENLELKKLVYLYLINYAK 458 +++++++++V +YL+ YA+ Sbjct: 92 SDDVKVRRMVSVYLLRYAE 110
>AP4B1_HUMAN (Q9Y6B7) AP-4 complex subunit beta-1 (Adapter-related protein| complex 4 beta 1 subunit) (Beta subunit of AP-4) (AP-4 adapter complex beta subunit) Length = 739 Score = 43.1 bits (100), Expect = 3e-04 Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 4/67 (5%) Frame = +3 Query: 267 IPELKEELNSQY----KDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVY 434 + ELK+ L + + + + ++ +++VI MT G D+S +F ++V T ++ KKLVY Sbjct: 10 VKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATVDIVQKKLVY 69 Query: 435 LYLINYA 455 LY+ YA Sbjct: 70 LYMCTYA 76
>AP4B1_MOUSE (Q9WV76) AP-4 complex subunit beta-1 (Adapter-related protein| complex 4 beta-1 subunit) (Beta subunit of AP-4) (AP-4 adapter complex beta subunit) Length = 739 Score = 42.0 bits (97), Expect = 7e-04 Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 4/67 (5%) Frame = +3 Query: 267 IPELKEELNSQY----KDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVY 434 + ELK+ L + + + + ++ +++VI MT G D+S +F ++V T ++ KKLVY Sbjct: 10 VKELKKALCNPHIQADRLRYRNVIQRVIRHMTQGLDMSDVFMEMVKASATVDIVQKKLVY 69 Query: 435 LYLINYA 455 LY+ YA Sbjct: 70 LYMGTYA 76
>AP3B_YEAST (P46682) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related| protein complex 3 beta subunit) (Clathrin assembly protein large beta chain) (Clathrin assembly protein complex 3 beta large chain) Length = 809 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 3/79 (3%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKD---VSSLFTDVVNCMQ 401 +S Y ++ +L LNS+ + +DA+K++I+ M D V F DVV + Sbjct: 32 ESSYTYYSQNINPQQLVTLLNSRNSREVRDAMKRIISIMASDDDSIDVQLYFADVVKNIT 91 Query: 402 TENLELKKLVYLYLINYAK 458 T + ++K+L++LYL+ +A+ Sbjct: 92 TNDTKVKRLIHLYLLRFAE 110
>AP2B_YEAST (P27351) AP-2 complex subunit beta (Beta-adaptin) (Clathrin| assembly protein large beta chain) (Clathrin assembly protein complex 2 beta large chain) Length = 700 Score = 34.3 bits (77), Expect = 0.16 Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 7/78 (8%) Frame = +3 Query: 231 DSKYFSTTKKGEI-PELKEELNSQYKD---KRKDAVKKVIAAMTVGK--DVSSLFTDVVN 392 D K F+ K EI +L+ ++K +RK+A++K+IA + +G ++S LF++++ Sbjct: 3 DQKVFARYKANEIVTDLQHFGVKKFKSNITRRKNALRKIIANLVLGNYGEMSVLFSELLK 62 Query: 393 CMQTE-NLELKKLVYLYL 443 Q E +LE+K++ + Y+ Sbjct: 63 FWQIEDDLEVKRICHEYI 80
>AP3D_DROME (P54362) AP-3 complex subunit delta (Delta-adaptin) (Garnet| protein) (Delta adaptin subunit of AP-3) Length = 1034 Score = 32.3 bits (72), Expect = 0.59 Identities = 19/70 (27%), Positives = 35/70 (50%) Frame = +3 Query: 228 HDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTE 407 +++KY ST I E+K+EL + +AV K+ +G D+S +++ M + Sbjct: 32 NEAKYISTC----IEEIKQELRQDNISVKCNAVAKLTYIQMLGYDISWAGFNIIEVMSSS 87 Query: 408 NLELKKLVYL 437 K++ YL Sbjct: 88 RFTCKRIGYL 97
>RNZ_BRAJA (Q89NF8) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3| endonuclease) Length = 301 Score = 32.3 bits (72), Expect = 0.59 Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Frame = -2 Query: 187 HRSPPPAAEPGVRDGGLRYARGGGRPACLRDGMGLD--SARGSQAGVRACESYGDQTDRE 14 H P A GV DG LR GRP + DG +D G G R GD E Sbjct: 157 HLLPDRLASLGVPDGPLRGELAQGRPVVIEDGRTIDPEDVLGPATGGRKLVVIGDTETTE 216 Query: 13 G 11 G Sbjct: 217 G 217
>COPB_YEAST (P41810) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 973 Score = 32.0 bits (71), Expect = 0.78 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +3 Query: 273 ELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN-CMQTENLELKKLVYLY 440 + ++ L +++ D +K ++ M G + L ++ M ++N ELKKL+Y Y Sbjct: 27 DFQKALEKGSDEQKIDTMKSILVTMLEGNPMPELLMHIIRFVMPSKNKELKKLLYFY 83
>ATIN_BHV1P (P30020) Alpha trans-inducing protein (Alpha-TIF)| Length = 504 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -2 Query: 130 ARGGGRPACLRDGMGLDSARGSQAGVRAC 44 ARGG P+ +R G+GL ARGS AC Sbjct: 439 ARGGPGPSPVRSGLGLSRARGSPGPGPAC 467
>COPB_SCHPO (Q9UUF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)| Length = 940 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +3 Query: 267 IPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN-CMQTENLELKKLVYLY 440 + LK L S+ + A+K ++ + G + S+ V+ M + N ELKKL+Y Y Sbjct: 17 VDALKTSLESKNDYVKISAMKTILRVVINGDSLPSILMHVIRFVMPSRNKELKKLLYYY 75
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -2 Query: 217 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 92 +PR + N ++P A PG GG R A G P R G Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -2 Query: 217 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 92 +PR + N ++P A PG GG R A G P R G Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -2 Query: 217 SPRRAYLPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDG 92 +PR + N ++P A PG GG R A G P R G Sbjct: 226 TPRPRHSQNAAKTPSAAGSPGPSSGGDRPAAGAATPKSCRSG 267
>KINH_STRPU (P35978) Kinesin heavy chain| Length = 1031 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -2 Query: 187 HRSPPPAAEPGVRDGGLRYARGGGRP 110 H P P G+R GG RGGG P Sbjct: 925 HPPPSPGGSTGIRGGGYSGIRGGGSP 950
>RRF_WIGBR (Q8D2G5) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 185 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%) Frame = +3 Query: 312 RKDA---VKKVIAAMTVGKDVSSLFTDVVNCMQTENLE-LKKLVYL 437 R+DA +KK+I A T+GKD F +V+ + +E KK++ L Sbjct: 132 RRDANEKIKKLIKAKTIGKDEDKKFQEVIQNLTNSRIEDTKKILKL 177
>VCOM_ADEM1 (O10442) Minor core protein (Protein V) (pV)| Length = 228 Score = 29.3 bits (64), Expect = 5.0 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = +2 Query: 59 RLAPPRRVQSHPIAQTGRPPATARISEASITNPGLRSRRR 178 R PP V+ HP + RPPA A I+ P R RRR Sbjct: 130 RAVPPVGVRYHPSIEVARPPA------ARISPPRRRRRRR 163
>AP3D1_HUMAN (O14617) AP-3 complex subunit delta-1 (Adapter-related protein| complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) Length = 1153 Score = 29.3 bits (64), Expect = 5.0 Identities = 18/69 (26%), Positives = 32/69 (46%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 410 ++KY S I E+K+EL + +AV K+ +G D+S +++ M Sbjct: 32 EAKYISQC----IDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASK 87 Query: 411 LELKKLVYL 437 K++ YL Sbjct: 88 FTFKRIGYL 96
>CCNA2_CHICK (P43449) Cyclin-A2 (Cyclin-A)| Length = 395 Score = 29.3 bits (64), Expect = 5.0 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -2 Query: 199 LPNTHRSPPPAAEPGVRDGGLR--YARGGGRPACLRDGMGLDSARGSQAGVRACESYGDQ 26 +P ++PPPAA V G LR AR G R+G G +A G Q + Y D+ Sbjct: 11 VPPAAKAPPPAAGTRVALGLLRGGPARPGPAAQAARNGEGRGAAAGQQQ--QPFSVYVDE 68 Query: 25 TDRE 14 D E Sbjct: 69 PDEE 72
>AP3D1_BOVIN (Q865S1) AP-3 complex subunit delta-1 (Adapter-related protein| complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) Length = 1207 Score = 29.3 bits (64), Expect = 5.0 Identities = 18/69 (26%), Positives = 32/69 (46%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 410 ++KY S I E+K+EL + +AV K+ +G D+S +++ M Sbjct: 32 EAKYISQC----IDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASK 87 Query: 411 LELKKLVYL 437 K++ YL Sbjct: 88 FTFKRIGYL 96
>RENBP_PIG (P17560) N-acylglucosamine 2-epimerase (EC 5.1.3.8) (GlcNAc| 2-epimerase) (N-acetyl-D-glucosamine 2-epimerase) (AGE) (Renin-binding protein) (RnBP) Length = 402 Score = 29.3 bits (64), Expect = 5.0 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 4/86 (4%) Frame = +2 Query: 53 HTRLAPPRRVQSHPIAQTGRPPATAR--ISEASITNPGLRSRRR*PVCIWQVGSPGRYER 226 H R+APP + + + + GRP R SE T +W+V + RY+ Sbjct: 94 HARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNE--------LWRVTAEARYQS 145 Query: 227 ARLQVL--LHHQKGGDPRAQGGAQLP 298 + ++ + H DP G QLP Sbjct: 146 EAVDMMDQIVHWVREDPSGLGRPQLP 171
>KCNC4_MOUSE (Q8R1C0) Potassium voltage-gated channel subfamily C member 4| (Voltage-gated potassium channel subunit Kv3.4) Length = 628 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/45 (35%), Positives = 19/45 (42%) Frame = -2 Query: 160 PGVRDGGLRYARGGGRPACLRDGMGLDSARGSQAGVRACESYGDQ 26 PG R L GGGRP G G + G G CE + D+ Sbjct: 58 PGTRLAWLADPDGGGRPESDGGGAGSSGSSGGGGGGGGCEFFFDR 102
>FEN1A_ORYSA (Q9SXQ6) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a)| Length = 380 Score = 28.9 bits (63), Expect = 6.6 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Frame = +3 Query: 261 GEIPELKEELNSQYKDKRKDAVKKVIAAMTVG-KDVSSLFTD-VVNCMQTENLELKKLVY 434 G+ P+LK++ ++ KR+DA K++ A+ G KD F+ V + N E K+L+ Sbjct: 88 GKPPDLKKQELAKRYSKREDATKELTEAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLR 147 Query: 435 L 437 L Sbjct: 148 L 148
>AP3D1_MOUSE (O54774) AP-3 complex subunit delta-1 (Adapter-related protein| complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) (mBLVR1) Length = 1199 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/69 (26%), Positives = 32/69 (46%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 410 ++KY S I E+K+EL + +AV K+ +G D+S +++ M Sbjct: 32 EAKYISQC----IDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASK 87 Query: 411 LELKKLVYL 437 K++ YL Sbjct: 88 FTFKRVGYL 96
>LEA2_CICAR (O49817) Late embryogenesis abundant protein 2 (CapLEA-2)| Length = 155 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +3 Query: 219 MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSS 371 M+ HD Y + KG E ++ +DK + A +K A KD +S Sbjct: 1 MTSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTS 51
>ATRIP_DROME (Q9VVN4) ATR-interacting protein mus304 (Mutagen-sensivite protein| 304) Length = 846 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/64 (23%), Positives = 31/64 (48%) Frame = +3 Query: 231 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 410 DSK + K GE+ L++EL + + ++K+ A +D + + + ++ Sbjct: 201 DSKERNEIKSGEVSLLRDELKHLRQQLQASKMEKLALADETNRDCNKKVAEAAKQIAAKD 260 Query: 411 LELK 422 +ELK Sbjct: 261 IELK 264
>ROCK1_RABIT (O77819) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (cAMP-dependent protein kinase ROCK-I) (CePKA) (Corneal epithelial Rho-associated-Ser/Thr kinase 1) (HEB Length = 1354 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 237 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 335 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 850 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 878
>ROCK1_HUMAN (Q13464) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (NY-REN-35 antigen) Length = 1354 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 237 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 335 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 850 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 878
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Frame = -2 Query: 226 PLISPRRAYLPNTHRSP--PPAAEPGVRDGGLRYARGGG 116 P + PR A P R P P A G+R G R+ GG Sbjct: 2449 PPLGPRYAVFPKDQRGPYPPDVASMGMRPHGFRFGFPGG 2487
>NOLA1_HUMAN (Q9NY12) H/ACA ribonucleoprotein complex subunit 1 (Nucleolar| protein family A member 1) (snoRNP protein GAR1) Length = 217 Score = 28.5 bits (62), Expect = 8.6 Identities = 19/48 (39%), Positives = 20/48 (41%) Frame = -2 Query: 199 LPNTHRSPPPAAEPGVRDGGLRYARGGGRPACLRDGMGLDSARGSQAG 56 LP P P E G GG R RGGGR R G RG + G Sbjct: 152 LPLQRFLPRPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG 199
>TARSH_HUMAN (Q7Z7G0) Target of Nesh-SH3 precursor (Tarsh) (Nesh-binding| protein) (NeshBP) (ABI gene family member 3-binding protein) Length = 1075 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 Query: 71 PRRVQSHPIAQTGRPPATARISEASITNPGLRSRRR 178 PRR P TG+P + IS IT P LRS R Sbjct: 716 PRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPR 751
>ROCK1_PANTR (P61584) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (Fragment) Length = 1003 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 237 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 335 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 499 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 527
>ROCK1_BOVIN (Q8MIT6) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (Fragment) Length = 441 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 237 KYFSTTKKGEIPELKEELNSQYKDKRKDAVKKV 335 +YFST K ++ ELKEE+ ++K ++ +KK+ Sbjct: 257 QYFSTLYKTQVKELKEEI----EEKNRENLKKI 285
>DPOLA_ORYSA (O48653) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1534 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -2 Query: 259 FLVVEKYLESCPLISPRRAYLPNTHRSPPPAAEPGVRDGGLRYARG 122 F+V +K+ S S +R P+T + P A+P + D G +G Sbjct: 852 FIVPDKFARSKEFNSTKRKMNPDTEAARPDEADPSIDDEGHHVDQG 897
>NELFA_HUMAN (Q9H3P2) Negative elongation factor A (NELF-A) (Wolf-Hirschhorn| syndrome candidate 2 protein) Length = 549 Score = 28.5 bits (62), Expect = 8.6 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -2 Query: 262 PFLVVEKYLESCPLISPRRAYLPNTHRSPPPAAEPGVR 149 P L YL S P + P +Y+P++ P P++ R Sbjct: 338 PALPSTSYLPSTPSVVPASSYIPSSETPPAPSSREASR 375 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,617,297 Number of Sequences: 219361 Number of extensions: 1094260 Number of successful extensions: 4422 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4416 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
