ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl20c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009347.1| Triticum aestivum clone wlm96.pk0001.b7:fis, full... 547 e-152
2dbj|AK068938.1| Oryza sativa (japonica cultivar-group) cDNA clon... 339 5e-90
3gb|AY109428.1| Zea mays CL501_1 mRNA sequence 327 2e-86
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 196 4e-47
5gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare str... 196 4e-47
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 196 4e-47
7ref|NM_117209.3| Arabidopsis thaliana clathrin binding AT4G11380... 143 6e-31
8gb|BT010362.1| Arabidopsis thaliana At4g11380 mRNA, complete cds 143 6e-31
9gb|AY093155.1| Arabidopsis thaliana beta-adaptin-like protein (A... 143 6e-31
10emb|BX828065.1|CNS0A2BU Arabidopsis thaliana Full-length cDNA Co... 143 6e-31
11gb|AF216386.1|AF216386 Arabidopsis thaliana beta-adaptin-like pr... 143 6e-31
12ref|NM_118475.3| Arabidopsis thaliana clathrin binding AT4G23460... 137 4e-29
13gb|AF216387.1|AF216387 Arabidopsis thaliana beta-adaptin-like pr... 137 4e-29
14gb|AY065000.1| Arabidopsis thaliana AT4g23460/F16G20_160 mRNA, c... 129 9e-27
15emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, ... 94 5e-16
16emb|AL031326.1|ATF16G20 Arabidopsis thaliana DNA chromosome 4, B... 94 5e-16
17emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, ... 86 1e-13
18emb|AL096882.2|ATF8L21 Arabidopsis thaliana DNA chromosome 4, BA... 86 1e-13
19gb|BT016054.1| Drosophila melanogaster LP17054 full insert cDNA 56 1e-04
20ref|XM_415772.1| PREDICTED: Gallus gallus similar to Ap2b1 prote... 56 1e-04
21ref|NM_078691.2| Drosophila melanogaster Adaptin CG12532-RA (Bap... 56 1e-04
22gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, re... 56 1e-04
23gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, re... 56 1e-04
24gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 ... 56 1e-04
25emb|X75910.1|DMBA D.melanogaster mRNA for beta-adaptin 56 1e-04
26ref|NM_007454.2| Mus musculus adaptor protein complex AP-1, beta... 54 4e-04
27ref|XM_714967.1| Candida albicans SC5314 putative clathrin-assoc... 54 4e-04
28ref|XM_714837.1| Candida albicans SC5314 putative clathrin-assoc... 54 4e-04
29gb|AC005528.43| Mus musculus strain 129S6/SvEvTac clone rp21-493... 54 4e-04
30gb|BC008513.1| Mus musculus adaptor protein complex AP-1, beta 1... 54 4e-04
31emb|AL645522.12| Mouse DNA sequence from clone RP23-64E17 on chr... 54 4e-04
32dbj|AK159273.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 54 4e-04
33dbj|AK155892.1| Mus musculus B6-derived CD11 +ve dendritic cells... 54 4e-04
34dbj|AK165747.1| Mus musculus 13 days embryo spinal cord cDNA, RI... 54 4e-04
35dbj|AK160042.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 54 4e-04
36dbj|AK170376.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 54 4e-04
37dbj|AK034140.1| Mus musculus adult male diencephalon cDNA, RIKEN... 54 4e-04
38dbj|AK211687.1| Mus musculus cDNA, clone:Y2G0122I18, strand:unsp... 54 4e-04
39dbj|AK180383.1| Mus musculus cDNA, clone:Y0G0114A03, strand:minu... 54 4e-04
40emb|Y07919.1|MMBPRADPR M.musculus mRNA for beta-prime-adaptin pr... 54 4e-04
41ref|XM_778670.1| PREDICTED: Strongylocentrotus purpuratus simila... 50 0.006
42ref|XM_796939.1| PREDICTED: Strongylocentrotus purpuratus simila... 50 0.006
43ref|XM_796917.1| PREDICTED: Strongylocentrotus purpuratus simila... 50 0.006
44ref|XM_796885.1| PREDICTED: Strongylocentrotus purpuratus simila... 50 0.006
45ref|XM_796857.1| PREDICTED: Strongylocentrotus purpuratus simila... 50 0.006
46ref|XM_796809.1| PREDICTED: Strongylocentrotus purpuratus simila... 50 0.006
47ref|XM_796763.1| PREDICTED: Strongylocentrotus purpuratus simila... 50 0.006
48ref|XM_796695.1| PREDICTED: Strongylocentrotus purpuratus simila... 50 0.006
49ref|XM_774827.1| PREDICTED: Strongylocentrotus purpuratus simila... 50 0.006
50emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chrom... 50 0.006
51gb|AC135795.21| Medicago truncatula clone mth2-28g10, complete s... 50 0.006
52gb|AC150889.3| Medicago truncatula chromosome 7 BAC clone mte1-6... 50 0.006
53ref|XM_681550.1| PREDICTED: Danio rerio similar to adaptor-relat... 48 0.025
54dbj|AB169049.1| Macaca fascicularis testis cDNA, clone: QtsA-168... 48 0.025
55ref|XM_582607.2| PREDICTED: Bos taurus similar to adaptor-relate... 46 0.10
56ref|XM_865584.1| PREDICTED: Bos taurus similar to adaptor-relate... 46 0.10
57ref|XM_876374.1| PREDICTED: Bos taurus similar to adaptor-relate... 46 0.10
58ref|XM_876313.1| PREDICTED: Bos taurus similar to adaptor-relate... 46 0.10
59ref|XM_876248.1| PREDICTED: Bos taurus similar to adaptor-relate... 46 0.10
60ref|XM_876183.1| PREDICTED: Bos taurus similar to adaptor-relate... 46 0.10
61ref|XM_876061.1| PREDICTED: Bos taurus similar to adaptor-relate... 46 0.10
62ref|XR_003087.1| PREDICTED: Mus musculus similar to adaptor-rela... 46 0.10
63ref|XM_860149.1| PREDICTED: Canis familiaris similar to adaptor-... 46 0.10
64ref|XM_847105.1| PREDICTED: Canis familiaris similar to adaptor-... 46 0.10
65ref|XM_543470.2| PREDICTED: Canis familiaris similar to adaptor-... 46 0.10
66ref|NM_080583.1| Rattus norvegicus adaptor-related protein compl... 46 0.10
67gb|BC103481.1| Rattus norvegicus adaptor-related protein complex... 46 0.10
68emb|Z83839.1|HS127L4 Human DNA sequence from clone RP1-127L4 on ... 46 0.10
69gb|BC105429.1| Bos taurus similar to adaptor-related protein com... 46 0.10
70gb|AC118772.5| Rattus norvegicus 10 BAC CH230-404C20 (Children's... 46 0.10
71ref|NG_002624.1| Homo sapiens adaptin, beta 1-like 2 (ADTB1L2) p... 46 0.10
72ref|NM_017277.1| Rattus norvegicus adaptor protein complex AP-1,... 46 0.10
73gb|M77246.1|RATBCCAPB R.norvegicus beta-chain clathrin associate... 46 0.10
74gb|M77245.1|RATBCCAPA R.norvegicus beta'-chain clathrin associat... 46 0.10
75gb|M34176.1|RATBADPTA Rat beta adaptin mRNA, complete cds 46 0.10
76emb|AL645473.12| Mouse DNA sequence from clone RP23-246H17 on ch... 46 0.10
77ref|XM_636754.1| Dictyostelium discoideum hypothetical protein (... 44 0.40
78ref|XM_848630.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
79ref|XM_862736.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
80ref|XM_862726.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
81ref|XM_862718.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
82ref|XM_862711.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
83ref|XM_862704.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
84ref|XM_862697.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
85ref|XM_537725.2| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
86ref|XM_862680.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
87ref|XM_862671.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
88ref|XM_862664.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
89ref|XM_862654.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
90ref|XM_862645.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
91ref|XM_862634.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
92ref|XM_862614.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
93ref|XM_862605.1| PREDICTED: Canis familiaris similar to adaptor-... 44 0.40
94emb|CR385856.1| Gallus gallus finished cDNA, clone ChEST206j22 44 0.40
95dbj|AP000824.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.40
96dbj|AP003486.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.40
97ref|NM_001030006.1| Homo sapiens adaptor-related protein complex... 42 1.6
98ref|NM_001282.2| Homo sapiens adaptor-related protein complex 2,... 42 1.6
99ref|XM_511415.1| PREDICTED: Pan troglodytes similar to adaptor-r... 42 1.6
100ref|XM_866869.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
101ref|XM_879185.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
102ref|XM_879164.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
103ref|XM_879135.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
104ref|XM_879107.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
105ref|XM_879081.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
106ref|XM_879048.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
107ref|XM_879012.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
108ref|XM_878986.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
109ref|XM_591504.2| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
110ref|XM_878933.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
111ref|XM_878905.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
112ref|XM_878878.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
113ref|XM_878849.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
114ref|XM_878816.1| PREDICTED: Bos taurus adaptor-related protein c... 42 1.6
115gb|AY341427.1| Homo sapiens beta adaptin subunit mRNA, complete ... 42 1.6
116emb|AL136124.10| Human DNA sequence from clone RP4-792D7 on chro... 42 1.6
117emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 42 1.6
118gb|AF367600.1| Merxmuellera disticha internal transcribed spacer... 42 1.6
119emb|CR860139.1| Pongo pygmaeus mRNA; cDNA DKFZp469O1619 (from cl... 42 1.6
120emb|CR749392.1| Homo sapiens mRNA; cDNA DKFZp781K0743 (from clon... 42 1.6
121gb|AC161478.5| Pan troglodytes BAC clone CH251-170F20 from chrom... 42 1.6
122gb|AC159215.2| Pan troglodytes BAC clone CH251-458G5 from chromo... 42 1.6
123emb|BX664747.11| Zebrafish DNA sequence from clone CH211-149D1 i... 42 1.6
124gb|AC019231.7| Homo sapiens BAC clone RP11-573O16 from 2, comple... 42 1.6
125gb|AC004134.1|AC004134 Homo sapiens chromosome 17, clone hCIT.50... 42 1.6
126gb|BC006201.2| Homo sapiens adaptor-related protein complex 2, b... 42 1.6
127gb|M34175.1|HUMBADPTA Human beta adaptin mRNA, complete cds 42 1.6
128gb|M34177.1|BOVBADPTA Cow beta adaptin mRNA, partial cds 42 1.6
129gb|AY819719.1| Sugarcane mosaic virus isolate FER-1 capsid prote... 40 6.2
130gb|AY819718.1| Sugarcane mosaic virus isolate PIR-2 capsid prote... 40 6.2
131gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones B... 40 6.2
132gb|DQ227694.1| Sugarcane mosaic virus isolate GX-1 polyprotein g... 40 6.2
133ref|XM_473310.1| Oryza sativa (japonica cultivar-group), predic... 40 6.2
134gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.2
135gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.2
136gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 6.2
137ref|XM_426433.1| PREDICTED: Gallus gallus similar to Butyrate re... 40 6.2
138gb|AY590778.1| Sugarcane mosaic virus polyprotein mRNA, partial cds 40 6.2
139ref|XM_755086.1| Ustilago maydis 521 hypothetical protein (UM040... 40 6.2
140ref|XM_567942.1| Cryptococcus neoformans var. neoformans JEC21 c... 40 6.2
141ref|XM_567943.1| Cryptococcus neoformans var. neoformans JEC21 c... 40 6.2
142gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 40 6.2
143ref|XM_572541.1| Cryptococcus neoformans var. neoformans JEC21 c... 40 6.2
144ref|XM_572542.1| Cryptococcus neoformans var. neoformans JEC21 c... 40 6.2
145gb|DQ141605.1| Sugarcane mosaic virus polyprotein mRNA, partial cds 40 6.2
146gb|AC102431.7| Mus musculus chromosome 14, clone RP24-106J1, com... 40 6.2
147emb|AM040436.1| Sugarcane mosaic virus partial cp gene for coat ... 40 6.2
148emb|AL359263.13| Human DNA sequence from clone RP13-88F20 on chr... 40 6.2
149gb|AC096051.7| Rattus norvegicus 10 BAC CH230-21G1 (Children's H... 40 6.2
150emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 6.2
151emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
152emb|AJ278405.1|SMO278405 Sugarcane mosaic virus genomic RNA for ... 40 6.2
153gb|AC158645.6| Mus musculus 6 BAC RP23-435I16 (Roswell Park Canc... 40 6.2
154gb|DQ438949.1| Sugarcane mosaic virus isolate KhzQ86 polyprotein... 40 6.2
155gb|AC020912.6| Homo sapiens chromosome 19 clone CTD-2583G20, com... 40 6.2
156gb|U78045.1|HSU78045 Human collagenase and stromelysin genes, co... 40 6.2
157gb|DQ369960.1| Sugarcane mosaic virus isolate KhzL66 polyprotein... 40 6.2
158gb|AY836523.1| Sugarcane mosaic virus strain E polyprotein gene,... 40 6.2
159dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
160dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
161dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
162gb|AY241923.1| Sugarcane mosaic virus nonfunctional polyprotein ... 40 6.2
163gb|AF090447.2| Zea mays 22 kDa alpha zein gene cluster, complete... 40 6.2
164dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.2
165gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, ... 40 6.2
166gb|DQ343236.1| Sugarcane mosaic virus nonfunctional coat protein... 40 6.2
167dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
168gb|AY953351.1| Sugarcane mosaic virus strain D polyprotein mRNA,... 40 6.2
169emb|AJ491974.1|SMO491974 Sugarcane mosaic virus partial cp gene ... 40 6.2
170emb|AJ491973.1|SMO491973 Sugarcane mosaic virus partial cp gene ... 40 6.2
171emb|AJ491972.1|SMO491972 Sugarcane mosaic virus partial cp gene ... 40 6.2
172emb|AJ491970.1|SMO491970 Sugarcane mosaic virus partial cp gene ... 40 6.2
173emb|AJ491969.1|SMO491969 Sugarcane mosaic virus partial cp gene ... 40 6.2
174emb|AJ491968.1|SMO491968 Sugarcane mosaic virus partial cp gene ... 40 6.2
175emb|AJ491967.1|SMO491967 Sugarcane mosaic virus partial cp gene ... 40 6.2
176emb|AJ491966.1|SMO491966 Sugarcane mosaic virus partial cp gene ... 40 6.2
177emb|AJ491965.1|SMO491965 Sugarcane mosaic virus partial cp gene ... 40 6.2
178emb|AJ491964.1|SMO491964 Sugarcane mosaic virus partial cp gene ... 40 6.2
179emb|AJ491963.1|SMO491963 Sugarcane mosaic virus partial cp gene ... 40 6.2
180emb|AJ491959.1|SMO491959 Sugarcane mosaic virus partial cp gene ... 40 6.2
181emb|AJ491956.1|SMO491956 Sugarcane mosaic virus partial cp gene ... 40 6.2
182emb|AJ491955.1|SMO491955 Sugarcane mosaic virus partial cp gene ... 40 6.2
183emb|AJ491954.1|SMO491954 Sugarcane mosaic virus partial cp gene ... 40 6.2
184emb|AJ491953.1|SMO491953 Sugarcane mosaic virus partial cp gene ... 40 6.2
185emb|AJ491952.1|SMO491952 Sugarcane mosaic virus partial cp gene ... 40 6.2
186emb|AJ491950.1|SMO491950 Sugarcane mosaic virus partial cp gene ... 40 6.2
187emb|AJ491949.1|SMO491949 Sugarcane mosaic virus partial cp gene ... 40 6.2
188emb|AJ491948.1|SMO491948 Sugarcane mosaic virus partial cp gene ... 40 6.2
189emb|AJ491943.1|SMO491943 Sugarcane mosaic virus partial cp gene ... 40 6.2
190dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
191dbj|AP005464.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
192gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Can... 40 6.2
193emb|AL049829.4|CNS0000B Human chromosome 14 DNA sequence BAC R-1... 40 6.2
194gb|DQ316252.1| Sugarcane mosaic virus isolate wd-sg polyprotein ... 40 6.2
195gb|DQ316251.1| Sugarcane mosaic virus isolate wd-dz polyprotein ... 40 6.2
196gb|DQ316250.1| Sugarcane mosaic virus isolate so-bl6 polyprotein... 40 6.2
197gb|DQ316249.1| Sugarcane mosaic virus isolate so-bl5 polyprotein... 40 6.2
198gb|DQ316248.1| Sugarcane mosaic virus isolate so-bl4 polyprotein... 40 6.2
199gb|DQ316247.1| Sugarcane mosaic virus isolate so-bl2 polyprotein... 40 6.2
200gb|DQ316244.1| Sugarcane mosaic virus isolate sh-wy polyprotein ... 40 6.2
201gb|DQ316243.1| Sugarcane mosaic virus isolate sh-sx polyprotein ... 40 6.2
202gb|DQ316242.1| Sugarcane mosaic virus isolate sh-nn polyprotein ... 40 6.2
203gb|DQ316240.1| Sugarcane mosaic virus isolate sh-hp2 polyprotein... 40 6.2
204gb|DQ316239.1| Sugarcane mosaic virus isolate sh-hp1 polyprotein... 40 6.2
205gb|DQ316238.1| Sugarcane mosaic virus isolate sh-gz4 polyprotein... 40 6.2
206gb|DQ316236.1| Sugarcane mosaic virus isolate sh-gz2 polyprotein... 40 6.2
207gb|DQ316235.1| Sugarcane mosaic virus isolate sh-gz1 polyprotein... 40 6.2
208gb|DQ316234.1| Sugarcane mosaic virus isolate sh-dz polyprotein ... 40 6.2
209gb|DQ316232.1| Sugarcane mosaic virus isolate mz-gz2 polyprotein... 40 6.2
210gb|AF006738.1|AF006738 Sugarcane mosaic virus coat protein gene,... 40 6.2
211gb|AF006737.1|AF006737 Sugarcane mosaic virus coat protein gene,... 40 6.2
212gb|AF006736.1|AF006736 Sugarcane mosaic virus coat protein gene,... 40 6.2
213gb|AF006735.1|AF006735 Sugarcane mosaic virus coat protein gene,... 40 6.2
214gb|AF006733.1|AF006733 Sugarcane mosaic virus coat protein gene,... 40 6.2
215gb|AF006732.1|AF006732 Sugarcane mosaic virus coat protein gene,... 40 6.2
216gb|AF006731.1|AF006731 Sugarcane mosaic virus coat protein gene,... 40 6.2
217gb|AF006730.1|AF006730 Sugarcane mosaic virus coat protein gene,... 40 6.2
218gb|AF006729.1|AF006729 Sugarcane mosaic virus coat protein gene,... 40 6.2
219gb|AF006728.1|AF006728 Sugarcane mosaic virus coat protein gene,... 40 6.2
220gb|U57354.1|SMU57354 Sugarcane mosaic virus strain A polyprotein... 40 6.2
221gb|U57357.1|SMU57357 Sugarcane mosaic virus strain E polyprotein... 40 6.2
222gb|U57356.1|SMU57356 Sugarcane mosaic virus strain D polyprotein... 40 6.2
223gb|M21778.1|PIJ101CG Plasmid pIJ101 (from S.lividans), complete ... 40 6.2
224emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chr... 40 6.2
225dbj|D00948.1|MSCCP Sugarcane mosaic virus mRNA for coat protein,... 40 6.2

>gb|BT009347.1| Triticum aestivum clone wlm96.pk0001.b7:fis, full insert mRNA
           sequence
          Length = 2214

 Score =  547 bits (276), Expect = e-152
 Identities = 359/386 (93%), Gaps = 8/386 (2%)
 Strand = Plus / Plus

                                                                       
Query: 81  tccaatcccatcccatcgcgcagacaggcaggc-------cgcccgccaccgcgcgc-at 132
           |||||||||||||||| |||||| |||||||||       || ||||| |||||||| | 
Sbjct: 29  tccaatcccatcccattgcgcaggcaggcaggcaggccgccgaccgccgccgcgcgcgag 88

                                                                       
Query: 133 atcggaggcctccatcacgaaccccgggctccgcagccggaggcggtgaccggtgtgtat 192
           |||||| ||||||| ||||| |||| |||||||||||||||||||| |||||||| || |
Sbjct: 89  atcggacgcctccaccacgaccccccggctccgcagccggaggcggcgaccggtgcgtgt 148

                                                                       
Query: 193 ttggcaggtaggctcgccggggcgatatgagcgggcacgactccaagtacttctccacca 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ttggcaggtaggctcgccggggcgatatgagcgggcacgactccaagtacttctccacca 208

                                                                       
Query: 253 ccaaaaagggggagatccccgagctcaaggaggagctcaactcccagtacaaggataaga 312
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 209 ccaaaaagggggagatccccgagctcaaggaggagctcaactcccagtacaaggacaaga 268

                                                                       
Query: 313 gaaaagatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatgtctcatcat 372
           ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| 
Sbjct: 269 gaaaagatgctgtcaagaaagtgattgcagcgatgaccgttggaaaagatgtctcatcac 328

                                                                       
Query: 373 tgtttacggatgttgtgaactgtatgcagactgagaacttggagctgaaaaaactagtat 432
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgtttacggatgtcgtgaactgtatgcagactgagaacttggagctgaaaaaactagtat 388

                                     
Query: 433 acttatatctcatcaactatgctaaa 458
           | || |||||||||||||||||||||
Sbjct: 389 atttgtatctcatcaactatgctaaa 414



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>dbj|AK068938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D19, full
           insert sequence
          Length = 2979

 Score =  339 bits (171), Expect = 5e-90
 Identities = 213/227 (93%)
 Strand = Plus / Plus

                                                                       
Query: 228 cacgactccaagtacttctccaccaccaaaaagggggagatccccgagctcaaggaggag 287
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 34  cacgactccaagtacttctccaccaccaagaagggggagatccccgagctcaaggaggag 93

                                                                       
Query: 288 ctcaactcccagtacaaggataagagaaaagatgctgtcaagaaagtgattgcagcaatg 347
           ||||||||||||||||||||||||||||||||||||||||||||||| || || || |||
Sbjct: 94  ctcaactcccagtacaaggataagagaaaagatgctgtcaagaaagttatcgctgctatg 153

                                                                       
Query: 348 actgttggaaaagatgtctcatcattgtttacggatgttgtgaactgtatgcagactgag 407
           ||||||||||||||||| ||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 154 actgttggaaaagatgtttcatctttgtttaccgacgttgtgaactgcatgcagactgag 213

                                                          
Query: 408 aacttggagctgaaaaaactagtatacttatatctcatcaactatgc 454
           |||||||||||||| ||||||||||| |||||||| || ||||||||
Sbjct: 214 aacttggagctgaagaaactagtatatttatatctgattaactatgc 260



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>gb|AY109428.1| Zea mays CL501_1 mRNA sequence
          Length = 3187

 Score =  327 bits (165), Expect = 2e-86
 Identities = 220/240 (91%)
 Strand = Plus / Minus

                                                                        
Query: 219  atgagcgggcacgactccaagtacttctccaccaccaaaaagggggagatccccgagctc 278
            ||||||||||||||||||||||||||||| |||||||| ||     ||||||||||||||
Sbjct: 3075 atgagcgggcacgactccaagtacttctctaccaccaagaannnnnagatccccgagctc 3016

                                                                        
Query: 279  aaggaggagctcaactcccagtacaaggataagagaaaagatgctgtcaagaaagtgatt 338
            ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 3015 aaggaggagctcaactcccagtataaggacaagagaaaagatgctgtcaagaaagtgatt 2956

                                                                        
Query: 339  gcagcaatgactgttggaaaagatgtctcatcattgtttacggatgttgtgaactgtatg 398
            || || |||||||| ||||| ||||||||||||||||| || |||||||||||||| |||
Sbjct: 2955 gctgctatgactgtaggaaaggatgtctcatcattgttcactgatgttgtgaactgcatg 2896

                                                                        
Query: 399  cagactgagaacttggagctgaaaaaactagtatacttatatctcatcaactatgctaaa 458
            |||||||||||||||||||| || ||||||||||| || |||||||||||||||||||||
Sbjct: 2895 cagactgagaacttggagctcaagaaactagtatatttgtatctcatcaactatgctaaa 2836



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  196 bits (99), Expect = 4e-47
 Identities = 138/151 (91%)
 Strand = Plus / Minus

                                                                            
Query: 304      aggataagagaaaagatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatg 363
                ||||||||||||||||||||||||||||||| || || || |||||||||||||||||||
Sbjct: 13566118 aggataagagaaaagatgctgtcaagaaagttatcgctgctatgactgttggaaaagatg 13566059

                                                                            
Query: 364      tctcatcattgtttacggatgttgtgaactgtatgcagactgagaacttggagctgaaaa 423
                | ||||| |||||||| || ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 13566058 tttcatctttgtttaccgacgttgtgaactgcatgcagactgagaacttggagctgaaga 13565999

                                               
Query: 424      aactagtatacttatatctcatcaactatgc 454
                |||||||||| |||||||| || ||||||||
Sbjct: 13565998 aactagtatatttatatctgattaactatgc 13565968



 Score =  194 bits (98), Expect = 2e-46
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                            
Query: 201      taggctcgccggggcgatatgagcgggcacgactccaagtacttctccaccaccaaaaag 260
                ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 13567353 taggctcgccggggcgagatgagcgggcacgactccaagtacttctccaccaccaagaag 13567294

                                                              
Query: 261      ggggagatccccgagctcaaggaggagctcaactcccagtacaagg 306
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13567293 ggggagatccccgagctcaaggaggagctcaactcccagtacaagg 13567248



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>gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0005A11, from chromosome 3, complete sequence
          Length = 168219

 Score =  196 bits (99), Expect = 4e-47
 Identities = 138/151 (91%)
 Strand = Plus / Minus

                                                                          
Query: 304    aggataagagaaaagatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatg 363
              ||||||||||||||||||||||||||||||| || || || |||||||||||||||||||
Sbjct: 126009 aggataagagaaaagatgctgtcaagaaagttatcgctgctatgactgttggaaaagatg 125950

                                                                          
Query: 364    tctcatcattgtttacggatgttgtgaactgtatgcagactgagaacttggagctgaaaa 423
              | ||||| |||||||| || ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 125949 tttcatctttgtttaccgacgttgtgaactgcatgcagactgagaacttggagctgaaga 125890

                                             
Query: 424    aactagtatacttatatctcatcaactatgc 454
              |||||||||| |||||||| || ||||||||
Sbjct: 125889 aactagtatatttatatctgattaactatgc 125859



 Score =  194 bits (98), Expect = 2e-46
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                          
Query: 201    taggctcgccggggcgatatgagcgggcacgactccaagtacttctccaccaccaaaaag 260
              ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 127244 taggctcgccggggcgagatgagcgggcacgactccaagtacttctccaccaccaagaag 127185

                                                            
Query: 261    ggggagatccccgagctcaaggaggagctcaactcccagtacaagg 306
              ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127184 ggggagatccccgagctcaaggaggagctcaactcccagtacaagg 127139



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  196 bits (99), Expect = 4e-47
 Identities = 138/151 (91%)
 Strand = Plus / Minus

                                                                            
Query: 304      aggataagagaaaagatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatg 363
                ||||||||||||||||||||||||||||||| || || || |||||||||||||||||||
Sbjct: 13561993 aggataagagaaaagatgctgtcaagaaagttatcgctgctatgactgttggaaaagatg 13561934

                                                                            
Query: 364      tctcatcattgtttacggatgttgtgaactgtatgcagactgagaacttggagctgaaaa 423
                | ||||| |||||||| || ||||||||||| |||||||||||||||||||||||||| |
Sbjct: 13561933 tttcatctttgtttaccgacgttgtgaactgcatgcagactgagaacttggagctgaaga 13561874

                                               
Query: 424      aactagtatacttatatctcatcaactatgc 454
                |||||||||| |||||||| || ||||||||
Sbjct: 13561873 aactagtatatttatatctgattaactatgc 13561843



 Score =  194 bits (98), Expect = 2e-46
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                            
Query: 201      taggctcgccggggcgatatgagcgggcacgactccaagtacttctccaccaccaaaaag 260
                ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 13563228 taggctcgccggggcgagatgagcgggcacgactccaagtacttctccaccaccaagaag 13563169

                                                              
Query: 261      ggggagatccccgagctcaaggaggagctcaactcccagtacaagg 306
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13563168 ggggagatccccgagctcaaggaggagctcaactcccagtacaagg 13563123



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>ref|NM_117209.3| Arabidopsis thaliana clathrin binding AT4G11380 mRNA, complete cds
          Length = 3310

 Score =  143 bits (72), Expect = 6e-31
 Identities = 195/236 (82%)
 Strand = Plus / Plus

                                                                       
Query: 219 atgagcgggcacgactccaagtacttctccaccaccaaaaagggggagatccccgagctc 278
           ||||| || ||||| || || ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 101 atgagtggtcacgattcgaaatacttctccacgacgaagaagggagagatccctgagctc 160

                                                                       
Query: 279 aaggaggagctcaactcccagtacaaggataagagaaaagatgctgtcaagaaagtgatt 338
           ||||| ||||| || |||||||| |||||||||||||||||||| || ||||| || |||
Sbjct: 161 aaggaagagcttaattcccagtataaggataagagaaaagatgcagttaagaaggttatt 220

                                                                       
Query: 339 gcagcaatgactgttggaaaagatgtctcatcattgtttacggatgttgtgaactgtatg 398
           || || |||||||||||||| ||||| |||||| | || || ||||| || || ||||||
Sbjct: 221 gcggcgatgactgttggaaaggatgtttcatcacttttcactgatgtagtcaattgtatg 280

                                                                   
Query: 399 cagactgagaacttggagctgaaaaaactagtatacttatatctcatcaactatgc 454
           || || || || |||||| |||| || || || ||||| |||||||| || |||||
Sbjct: 281 caaacggaaaatttggagttgaagaagcttgtttacttgtatctcataaattatgc 336



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>gb|BT010362.1| Arabidopsis thaliana At4g11380 mRNA, complete cds
          Length = 2685

 Score =  143 bits (72), Expect = 6e-31
 Identities = 195/236 (82%)
 Strand = Plus / Plus

                                                                       
Query: 219 atgagcgggcacgactccaagtacttctccaccaccaaaaagggggagatccccgagctc 278
           ||||| || ||||| || || ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 1   atgagtggtcacgattcgaaatacttctccacgacgaagaagggagagatccctgagctc 60

                                                                       
Query: 279 aaggaggagctcaactcccagtacaaggataagagaaaagatgctgtcaagaaagtgatt 338
           ||||| ||||| || |||||||| |||||||||||||||||||| || ||||| || |||
Sbjct: 61  aaggaagagcttaattcccagtataaggataagagaaaagatgcagttaagaaggttatt 120

                                                                       
Query: 339 gcagcaatgactgttggaaaagatgtctcatcattgtttacggatgttgtgaactgtatg 398
           || || |||||||||||||| ||||| |||||| | || || ||||| || || ||||||
Sbjct: 121 gcggcgatgactgttggaaaggatgtttcatcacttttcactgatgtagtcaattgtatg 180

                                                                   
Query: 399 cagactgagaacttggagctgaaaaaactagtatacttatatctcatcaactatgc 454
           || || || || |||||| |||| || || || ||||| |||||||| || |||||
Sbjct: 181 caaacggaaaatttggagttgaagaagcttgtttacttgtatctcataaattatgc 236



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>gb|AY093155.1| Arabidopsis thaliana beta-adaptin-like protein (At4g11380) mRNA,
           complete cds
          Length = 2972

 Score =  143 bits (72), Expect = 6e-31
 Identities = 195/236 (82%)
 Strand = Plus / Plus

                                                                       
Query: 219 atgagcgggcacgactccaagtacttctccaccaccaaaaagggggagatccccgagctc 278
           ||||| || ||||| || || ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 82  atgagtggtcacgattcgaaatacttctccacgacgaagaagggagagatccctgagctc 141

                                                                       
Query: 279 aaggaggagctcaactcccagtacaaggataagagaaaagatgctgtcaagaaagtgatt 338
           ||||| ||||| || |||||||| |||||||||||||||||||| || ||||| || |||
Sbjct: 142 aaggaagagcttaattcccagtataaggataagagaaaagatgcagttaagaaggttatt 201

                                                                       
Query: 339 gcagcaatgactgttggaaaagatgtctcatcattgtttacggatgttgtgaactgtatg 398
           || || |||||||||||||| ||||| |||||| | || || ||||| || || ||||||
Sbjct: 202 gcggcgatgactgttggaaaggatgtttcatcacttttcactgatgtagtcaattgtatg 261

                                                                   
Query: 399 cagactgagaacttggagctgaaaaaactagtatacttatatctcatcaactatgc 454
           || || || || |||||| |||| || || || ||||| |||||||| || |||||
Sbjct: 262 caaacggaaaatttggagttgaagaagcttgtttacttgtatctcataaattatgc 317



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>emb|BX828065.1|CNS0A2BU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH4ZB04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2928

 Score =  143 bits (72), Expect = 6e-31
 Identities = 195/236 (82%)
 Strand = Plus / Plus

                                                                       
Query: 219 atgagcgggcacgactccaagtacttctccaccaccaaaaagggggagatccccgagctc 278
           ||||| || ||||| || || ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 100 atgagtggtcacgattcgaaatacttctccacgacgaagaagggagagatccctgagctc 159

                                                                       
Query: 279 aaggaggagctcaactcccagtacaaggataagagaaaagatgctgtcaagaaagtgatt 338
           ||||| ||||| || |||||||| |||||||||||||||||||| || ||||| || |||
Sbjct: 160 aaggaagagcttaattcccagtataaggataagagaaaagatgcagttaagaaggttatt 219

                                                                       
Query: 339 gcagcaatgactgttggaaaagatgtctcatcattgtttacggatgttgtgaactgtatg 398
           || || |||||||||||||| ||||| |||||| | || || ||||| || || ||||||
Sbjct: 220 gcggcgatgactgttggaaaggatgtttcatcacttttcactgatgtagtcaattgtatg 279

                                                                   
Query: 399 cagactgagaacttggagctgaaaaaactagtatacttatatctcatcaactatgc 454
           || || || || |||||| |||| || || || ||||| |||||||| || |||||
Sbjct: 280 caaacggaaaatttggagttgaagaagcttgtttacttgtatctcataaattatgc 335



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>gb|AF216386.1|AF216386 Arabidopsis thaliana beta-adaptin-like protein B mRNA, complete cds
          Length = 2939

 Score =  143 bits (72), Expect = 6e-31
 Identities = 195/236 (82%)
 Strand = Plus / Plus

                                                                       
Query: 219 atgagcgggcacgactccaagtacttctccaccaccaaaaagggggagatccccgagctc 278
           ||||| || ||||| || || ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 42  atgagtggtcacgattcgaaatacttctccacgacgaagaagggagagatccctgagctc 101

                                                                       
Query: 279 aaggaggagctcaactcccagtacaaggataagagaaaagatgctgtcaagaaagtgatt 338
           ||||| ||||| || |||||||| |||||||||||||||||||| || ||||| || |||
Sbjct: 102 aaggaagagcttaattcccagtataaggataagagaaaagatgcagttaagaaggttatt 161

                                                                       
Query: 339 gcagcaatgactgttggaaaagatgtctcatcattgtttacggatgttgtgaactgtatg 398
           || || |||||||||||||| ||||| |||||| | || || ||||| || || ||||||
Sbjct: 162 gcggcgatgactgttggaaaggatgtttcatcacttttcactgatgtagtcaattgtatg 221

                                                                   
Query: 399 cagactgagaacttggagctgaaaaaactagtatacttatatctcatcaactatgc 454
           || || || || |||||| |||| || || || ||||| |||||||| || |||||
Sbjct: 222 caaacggaaaatttggagttgaagaagcttgtttacttgtatctcataaattatgc 277



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>ref|NM_118475.3| Arabidopsis thaliana clathrin binding AT4G23460 mRNA, complete cds
          Length = 2962

 Score =  137 bits (69), Expect = 4e-29
 Identities = 165/197 (83%)
 Strand = Plus / Plus

                                                                       
Query: 258 aagggggagatccccgagctcaaggaggagctcaactcccagtacaaggataagagaaaa 317
           ||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||| |||
Sbjct: 92  aagggagagatccctgagctcaaggaagagctgaattcacagtacaaggataagaggaaa 151

                                                                       
Query: 318 gatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgttt 377
           |||||||| ||||| || ||||| ||||||||||||||||| ||||| |||||| | || 
Sbjct: 152 gatgctgttaagaaggttattgcggcaatgactgttggaaaggatgtttcatcacttttc 211

                                                                       
Query: 378 acggatgttgtgaactgtatgcagactgagaacttggagctgaaaaaactagtatactta 437
           || ||||| || || || ||||| ||||||||  ||||| |||| || || || ||||| 
Sbjct: 212 actgatgtagtcaattgcatgcaaactgagaatctggagttgaagaagcttgtttacttg 271

                            
Query: 438 tatctcatcaactatgc 454
           ||||| || ||||||||
Sbjct: 272 tatctgataaactatgc 288



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>gb|AF216387.1|AF216387 Arabidopsis thaliana beta-adaptin-like protein C mRNA, partial cds
          Length = 2761

 Score =  137 bits (69), Expect = 4e-29
 Identities = 165/197 (83%)
 Strand = Plus / Plus

                                                                       
Query: 258 aagggggagatccccgagctcaaggaggagctcaactcccagtacaaggataagagaaaa 317
           ||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||| |||
Sbjct: 31  aagggagagatccctgagctcaaggaagagctgaattcacagtacaaggataagaggaaa 90

                                                                       
Query: 318 gatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgttt 377
           |||||||| ||||| || ||||| ||||||||||||||||| ||||| |||||| | || 
Sbjct: 91  gatgctgttaagaaggttattgcggcaatgactgttggaaaggatgtttcatcacttttc 150

                                                                       
Query: 378 acggatgttgtgaactgtatgcagactgagaacttggagctgaaaaaactagtatactta 437
           || ||||| || || || ||||| ||||||||  ||||| |||| || || || ||||| 
Sbjct: 151 actgatgtagtcaattgcatgcaaactgagaatctggagttgaagaagcttgtttacttg 210

                            
Query: 438 tatctcatcaactatgc 454
           ||||| || ||||||||
Sbjct: 211 tatctgataaactatgc 227



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>gb|AY065000.1| Arabidopsis thaliana AT4g23460/F16G20_160 mRNA, complete cds
          Length = 2955

 Score =  129 bits (65), Expect = 9e-27
 Identities = 164/197 (83%)
 Strand = Plus / Plus

                                                                       
Query: 258 aagggggagatccccgagctcaaggaggagctcaactcccagtacaaggataagagaaaa 317
           ||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||| |||
Sbjct: 92  aagggagagatccctgagctcaaggaagagctgaattcacagtacaaggataagaggaaa 151

                                                                       
Query: 318 gatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgttt 377
           |||||||| ||||| || ||||| || |||||||||||||| ||||| |||||| | || 
Sbjct: 152 gatgctgttaagaaggttattgcggcgatgactgttggaaaggatgtttcatcacttttc 211

                                                                       
Query: 378 acggatgttgtgaactgtatgcagactgagaacttggagctgaaaaaactagtatactta 437
           || ||||| || || || ||||| ||||||||  ||||| |||| || || || ||||| 
Sbjct: 212 actgatgtagtcaattgcatgcaaactgagaatctggagttgaagaagcttgtttacttg 271

                            
Query: 438 tatctcatcaactatgc 454
           ||||| || ||||||||
Sbjct: 272 tatctgataaactatgc 288



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>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59
          Length = 199199

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 125/151 (82%)
 Strand = Plus / Minus

                                                                          
Query: 304    aggataagagaaaagatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatg 363
              |||||||||| ||||||||||| ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 101952 aggataagaggaaagatgctgttaagaaggttattgcggcaatgactgttggaaaggatg 101893

                                                                          
Query: 364    tctcatcattgtttacggatgttgtgaactgtatgcagactgagaacttggagctgaaaa 423
              | |||||| | || || ||||| || || || ||||| ||||||||  ||||| |||| |
Sbjct: 101892 tttcatcacttttcactgatgtagtcaattgcatgcaaactgagaatctggagttgaaga 101833

                                             
Query: 424    aactagtatacttatatctcatcaactatgc 454
              | || || ||||| ||||| || ||||||||
Sbjct: 101832 agcttgtttacttgtatctgataaactatgc 101802



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 258    aagggggagatccccgagctcaaggaggagctcaactcccagtacaagg 306
              ||||| |||||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 102441 aagggagagatccctgagctcaaggaagagctgaattcacagtacaagg 102393



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>emb|AL031326.1|ATF16G20 Arabidopsis thaliana DNA chromosome 4, BAC clone F16G20 (ESSAII
             project)
          Length = 97006

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 125/151 (82%)
 Strand = Plus / Minus

                                                                         
Query: 304   aggataagagaaaagatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatg 363
             |||||||||| ||||||||||| ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 60420 aggataagaggaaagatgctgttaagaaggttattgcggcaatgactgttggaaaggatg 60361

                                                                         
Query: 364   tctcatcattgtttacggatgttgtgaactgtatgcagactgagaacttggagctgaaaa 423
             | |||||| | || || ||||| || || || ||||| ||||||||  ||||| |||| |
Sbjct: 60360 tttcatcacttttcactgatgtagtcaattgcatgcaaactgagaatctggagttgaaga 60301

                                            
Query: 424   aactagtatacttatatctcatcaactatgc 454
             | || || ||||| ||||| || ||||||||
Sbjct: 60300 agcttgtttacttgtatctgataaactatgc 60270



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 258   aagggggagatccccgagctcaaggaggagctcaactcccagtacaagg 306
             ||||| |||||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 60909 aagggagagatccctgagctcaaggaagagctgaattcacagtacaagg 60861



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>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31
          Length = 198301

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 124/151 (82%)
 Strand = Plus / Plus

                                                                          
Query: 304    aggataagagaaaagatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatg 363
              ||||||||||||||||||| || ||||| || ||||| || |||||||||||||| ||||
Sbjct: 165397 aggataagagaaaagatgcagttaagaaggttattgcggcgatgactgttggaaaggatg 165456

                                                                          
Query: 364    tctcatcattgtttacggatgttgtgaactgtatgcagactgagaacttggagctgaaaa 423
              | |||||| | || || ||||| || || |||||||| || || || |||||| |||| |
Sbjct: 165457 tttcatcacttttcactgatgtagtcaattgtatgcaaacggaaaatttggagttgaaga 165516

                                             
Query: 424    aactagtatacttatatctcatcaactatgc 454
              | || || ||||| |||||||| || |||||
Sbjct: 165517 agcttgtttacttgtatctcataaattatgc 165547



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                          
Query: 219    atgagcgggcacgactccaagtacttctccaccaccaaaaagggggagatccccgagctc 278
              ||||| || ||||| || || ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 164845 atgagtggtcacgattcgaaatacttctccacgacgaagaagggagagatccctgagctc 164904

                                          
Query: 279    aaggaggagctcaactcccagtacaagg 306
              ||||| ||||| || |||||||| ||||
Sbjct: 164905 aaggaagagcttaattcccagtataagg 164932



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>emb|AL096882.2|ATF8L21 Arabidopsis thaliana DNA chromosome 4, BAC clone F8L21 (ESSA project)
          Length = 98948

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 124/151 (82%)
 Strand = Plus / Plus

                                                                         
Query: 304   aggataagagaaaagatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatg 363
             ||||||||||||||||||| || ||||| || ||||| || |||||||||||||| ||||
Sbjct: 92391 aggataagagaaaagatgcagttaagaaggttattgcggcgatgactgttggaaaggatg 92450

                                                                         
Query: 364   tctcatcattgtttacggatgttgtgaactgtatgcagactgagaacttggagctgaaaa 423
             | |||||| | || || ||||| || || |||||||| || || || |||||| |||| |
Sbjct: 92451 tttcatcacttttcactgatgtagtcaattgtatgcaaacggaaaatttggagttgaaga 92510

                                            
Query: 424   aactagtatacttatatctcatcaactatgc 454
             | || || ||||| |||||||| || |||||
Sbjct: 92511 agcttgtttacttgtatctcataaattatgc 92541



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                         
Query: 219   atgagcgggcacgactccaagtacttctccaccaccaaaaagggggagatccccgagctc 278
             ||||| || ||||| || || ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 91839 atgagtggtcacgattcgaaatacttctccacgacgaagaagggagagatccctgagctc 91898

                                         
Query: 279   aaggaggagctcaactcccagtacaagg 306
             ||||| ||||| || |||||||| ||||
Sbjct: 91899 aaggaagagcttaattcccagtataagg 91926



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>gb|BT016054.1| Drosophila melanogaster LP17054 full insert cDNA
          Length = 3231

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 234 tccaagtacttctccaccaccaaaaagggggagatccccgagctcaag 281
           |||||||||||| |||||||||| ||||| ||||||  ||||||||||
Sbjct: 104 tccaagtacttcaccaccaccaagaagggcgagatcttcgagctcaag 151



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>ref|XM_415772.1| PREDICTED: Gallus gallus similar to Ap2b1 protein (LOC417525), mRNA
          Length = 3465

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                       
Query: 315 aaagatgctgtcaagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattg 374
           ||||| ||||| ||||| || |||||||| |||||||| || || ||||||   ||| | 
Sbjct: 91  aaagaagctgtaaagaaggttattgcagccatgactgtggggaaggatgtcagctcactc 150

                                           
Query: 375 tttacggatgttgtgaactgtatgcagactga 406
           ||| | |||||||||||||| |||||||||||
Sbjct: 151 tttcctgatgttgtgaactgcatgcagactga 182



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>ref|NM_078691.2| Drosophila melanogaster Adaptin CG12532-RA (Bap), mRNA
          Length = 3235

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 234 tccaagtacttctccaccaccaaaaagggggagatccccgagctcaag 281
           |||||||||||| |||||||||| ||||| ||||||  ||||||||||
Sbjct: 122 tccaagtacttcaccaccaccaagaagggcgagatcttcgagctcaag 169



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>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone
              BACR33M08, complete sequence
          Length = 180263

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 234    tccaagtacttctccaccaccaaaaagggggagatccccgagctcaag 281
              |||||||||||| |||||||||| ||||| ||||||  ||||||||||
Sbjct: 128412 tccaagtacttcaccaccaccaagaagggcgagatcttcgagctcaag 128459



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>gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, region 18F-18F, BAC clone
             BACR48P17, complete sequence
          Length = 176195

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 234   tccaagtacttctccaccaccaaaaagggggagatccccgagctcaag 281
             |||||||||||| |||||||||| ||||| ||||||  ||||||||||
Sbjct: 11772 tccaagtacttcaccaccaccaagaagggcgagatcttcgagctcaag 11819



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>gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 of 74 of the complete
             sequence
          Length = 207432

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 234   tccaagtacttctccaccaccaaaaagggggagatccccgagctcaag 281
             |||||||||||| |||||||||| ||||| ||||||  ||||||||||
Sbjct: 31911 tccaagtacttcaccaccaccaagaagggcgagatcttcgagctcaag 31958



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>emb|X75910.1|DMBA D.melanogaster mRNA for beta-adaptin
          Length = 3217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 234 tccaagtacttctccaccaccaaaaagggggagatccccgagctcaag 281
           |||||||||||| |||||||||| ||||| ||||||  ||||||||||
Sbjct: 100 tccaagtacttcaccaccaccaagaagggcgagatcttcgagctcaag 147



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>ref|NM_007454.2| Mus musculus adaptor protein complex AP-1, beta 1 subunit (Ap1b1),
           mRNA
          Length = 3942

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 276 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 314



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>ref|XM_714967.1| Candida albicans SC5314 putative clathrin-associated protein AP-1
           complex component (CaO19_7861), mRNA
          Length = 2328

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 332 agtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||  ||||||||||||||| |||||||| |||||||| ||| | ||||||
Sbjct: 171 agtgattcaagcaatgactgttggtaaagatgtatcatcattatttcctgatgtt 225



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>ref|XM_714837.1| Candida albicans SC5314 putative clathrin-associated protein AP-1
           complex component (CaO19_231), mRNA
          Length = 2325

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 332 agtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||  ||||||||||||||| |||||||| |||||||| ||| | ||||||
Sbjct: 171 agtgattcaagcaatgactgttggtaaagatgtatcatcattatttcctgatgtt 225



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>gb|AC005528.43| Mus musculus strain 129S6/SvEvTac clone rp21-493n6 map 11a2, complete
              sequence
          Length = 199326

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 327    aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
              ||||||||||||||| |||||||||| || |||||||||
Sbjct: 179740 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 179702



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>gb|BC008513.1| Mus musculus adaptor protein complex AP-1, beta 1 subunit, mRNA
           (cDNA clone MGC:5850 IMAGE:3601435), complete cds
          Length = 3724

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 170 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 208



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>emb|AL645522.12| Mouse DNA sequence from clone RP23-64E17 on chromosome 11 Cntains the 3'
              end of the Nipsnap1 gene for 4-nitrophenylphosphatase
              domain and non-neuronal SNAP25-like protein homolog 1 (C.
              elegans), a novel gene, a ribosomal protein L17 (Rpl17)
              pseudogene, the Nefh gene for neurofilament heavy
              polypeptide, the Ap1b1 gene for adaptor protein complex
              AP-1 beta 1 subunit, the gene for the ortholog of human
              RAS-related protein on chromosome 22, the gene for the
              ortholog of human growth arrest-specific 2 like 1 GAS2L1
              and six CpG islands, complete sequence
          Length = 183758

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 327    aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
              ||||||||||||||| |||||||||| || |||||||||
Sbjct: 127211 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 127249



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>dbj|AK159273.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420013K18 product:adaptor protein
           complex AP-1, beta 1 subunit, full insert sequence
          Length = 3762

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 248 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 286



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>dbj|AK155892.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730314K12
           product:adaptor protein complex AP-1, beta 1 subunit,
           full insert sequence
          Length = 3792

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 277 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 315



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>dbj|AK165747.1| Mus musculus 13 days embryo spinal cord cDNA, RIKEN full-length
           enriched library, clone:G630049C13 product:adaptor
           protein complex AP-1, beta 1 subunit, full insert
           sequence
          Length = 3799

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 273 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 311



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>dbj|AK160042.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420045E07 product:adaptor protein
           complex AP-1, beta 1 subunit, full insert sequence
          Length = 3762

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 248 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 286



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>dbj|AK170376.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630101J08
           product:adaptor protein complex AP-1, beta 1 subunit,
           full insert sequence
          Length = 3930

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 266 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 304



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>dbj|AK034140.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330159F11 product:adaptor
           protein complex AP-1, beta 1 subunit, full insert
           sequence
          Length = 4253

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 557 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 595



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>dbj|AK211687.1| Mus musculus cDNA, clone:Y2G0122I18, strand:unspecified
          Length = 462

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 367 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 405



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>dbj|AK180383.1| Mus musculus cDNA, clone:Y0G0114A03, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000009234, based on BLAT search
          Length = 355

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 150 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 188



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>emb|Y07919.1|MMBPRADPR M.musculus mRNA for beta-prime-adaptin protein
          Length = 3885

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| |||||||||| || |||||||||
Sbjct: 212 aagaaagtgattgcatcaatgactgtgggcaaagatgtc 250



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>ref|XM_778670.1| PREDICTED: Strongylocentrotus purpuratus similar to CG12532-PA
           (LOC578506), partial mRNA
          Length = 1167

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||| ||||||   ||||| || ||||||||||||   ||  ||||| | ||||| 
Sbjct: 103 aagaaagtcattgcaagcatgacagtcggaaaagatgtcagctctctgtttccagatgtg 162

                                                    
Query: 387 gtgaactgtatgcagactgagaacttggagctgaaaaaact 427
           |||||||| ||||||||||| ||| | |||||||| |||||
Sbjct: 163 gtgaactgcatgcagactgacaaccttgagctgaagaaact 203



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>ref|XM_796939.1| PREDICTED: Strongylocentrotus purpuratus similar to Adapter-related
           protein complex 1 beta 1 subunit (Beta-adaptin 1)
           (Adaptor protein complex AP-1 beta-1 subunit) (Golgi
           adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly
           protein complex 1 beta large chain), transcript variant
           8 (LOC577543), mRNA
          Length = 4175

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||| ||||||   ||||| || ||||||||||||   ||  ||||| | ||||| 
Sbjct: 103 aagaaagtcattgcaagcatgacagtcggaaaagatgtcagctctctgtttccagatgtg 162

                                                    
Query: 387 gtgaactgtatgcagactgagaacttggagctgaaaaaact 427
           |||||||| ||||||||||| ||| | |||||||| |||||
Sbjct: 163 gtgaactgcatgcagactgacaaccttgagctgaagaaact 203



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>ref|XM_796917.1| PREDICTED: Strongylocentrotus purpuratus similar to Adapter-related
           protein complex 1 beta 1 subunit (Beta-adaptin 1)
           (Adaptor protein complex AP-1 beta-1 subunit) (Golgi
           adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly
           protein complex 1 beta large chain), transcript variant
           7 (LOC577543), mRNA
          Length = 4250

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||| ||||||   ||||| || ||||||||||||   ||  ||||| | ||||| 
Sbjct: 103 aagaaagtcattgcaagcatgacagtcggaaaagatgtcagctctctgtttccagatgtg 162

                                                    
Query: 387 gtgaactgtatgcagactgagaacttggagctgaaaaaact 427
           |||||||| ||||||||||| ||| | |||||||| |||||
Sbjct: 163 gtgaactgcatgcagactgacaaccttgagctgaagaaact 203



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>ref|XM_796885.1| PREDICTED: Strongylocentrotus purpuratus similar to Adapter-related
           protein complex 1 beta 1 subunit (Beta-adaptin 1)
           (Adaptor protein complex AP-1 beta-1 subunit) (Golgi
           adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly
           protein complex 1 beta large chain), transcript variant
           6 (LOC577543), mRNA
          Length = 4139

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||| ||||||   ||||| || ||||||||||||   ||  ||||| | ||||| 
Sbjct: 103 aagaaagtcattgcaagcatgacagtcggaaaagatgtcagctctctgtttccagatgtg 162

                                                    
Query: 387 gtgaactgtatgcagactgagaacttggagctgaaaaaact 427
           |||||||| ||||||||||| ||| | |||||||| |||||
Sbjct: 163 gtgaactgcatgcagactgacaaccttgagctgaagaaact 203



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>ref|XM_796857.1| PREDICTED: Strongylocentrotus purpuratus similar to Adapter-related
           protein complex 1 beta 1 subunit (Beta-adaptin 1)
           (Adaptor protein complex AP-1 beta-1 subunit) (Golgi
           adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly
           protein complex 1 beta large chain), transcript variant
           5 (LOC577543), mRNA
          Length = 4175

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||| ||||||   ||||| || ||||||||||||   ||  ||||| | ||||| 
Sbjct: 103 aagaaagtcattgcaagcatgacagtcggaaaagatgtcagctctctgtttccagatgtg 162

                                                    
Query: 387 gtgaactgtatgcagactgagaacttggagctgaaaaaact 427
           |||||||| ||||||||||| ||| | |||||||| |||||
Sbjct: 163 gtgaactgcatgcagactgacaaccttgagctgaagaaact 203



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>ref|XM_796809.1| PREDICTED: Strongylocentrotus purpuratus similar to Adapter-related
           protein complex 1 beta 1 subunit (Beta-adaptin 1)
           (Adaptor protein complex AP-1 beta-1 subunit) (Golgi
           adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly
           protein complex 1 beta large chain), transcript variant
           4 (LOC577543), mRNA
          Length = 4238

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||| ||||||   ||||| || ||||||||||||   ||  ||||| | ||||| 
Sbjct: 103 aagaaagtcattgcaagcatgacagtcggaaaagatgtcagctctctgtttccagatgtg 162

                                                    
Query: 387 gtgaactgtatgcagactgagaacttggagctgaaaaaact 427
           |||||||| ||||||||||| ||| | |||||||| |||||
Sbjct: 163 gtgaactgcatgcagactgacaaccttgagctgaagaaact 203



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>ref|XM_796763.1| PREDICTED: Strongylocentrotus purpuratus similar to Adapter-related
           protein complex 1 beta 1 subunit (Beta-adaptin 1)
           (Adaptor protein complex AP-1 beta-1 subunit) (Golgi
           adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly
           protein complex 1 beta large chain), transcript variant
           3 (LOC577543), mRNA
          Length = 4127

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||| ||||||   ||||| || ||||||||||||   ||  ||||| | ||||| 
Sbjct: 103 aagaaagtcattgcaagcatgacagtcggaaaagatgtcagctctctgtttccagatgtg 162

                                                    
Query: 387 gtgaactgtatgcagactgagaacttggagctgaaaaaact 427
           |||||||| ||||||||||| ||| | |||||||| |||||
Sbjct: 163 gtgaactgcatgcagactgacaaccttgagctgaagaaact 203



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>ref|XM_796695.1| PREDICTED: Strongylocentrotus purpuratus similar to Adapter-related
           protein complex 1 beta 1 subunit (Beta-adaptin 1)
           (Adaptor protein complex AP-1 beta-1 subunit) (Golgi
           adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly
           protein complex 1 beta large chain), transcript variant
           2 (LOC577543), mRNA
          Length = 3003

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||| ||||||   ||||| || ||||||||||||   ||  ||||| | ||||| 
Sbjct: 103 aagaaagtcattgcaagcatgacagtcggaaaagatgtcagctctctgtttccagatgtg 162

                                                    
Query: 387 gtgaactgtatgcagactgagaacttggagctgaaaaaact 427
           |||||||| ||||||||||| ||| | |||||||| |||||
Sbjct: 163 gtgaactgcatgcagactgacaaccttgagctgaagaaact 203



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>ref|XM_774827.1| PREDICTED: Strongylocentrotus purpuratus similar to Adapter-related
           protein complex 1 beta 1 subunit (Beta-adaptin 1)
           (Adaptor protein complex AP-1 beta-1 subunit) (Golgi
           adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly
           protein complex 1 beta large chain), transcript variant
           1 (LOC577543), mRNA
          Length = 4253

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgtt 386
           |||||||| ||||||   ||||| || ||||||||||||   ||  ||||| | ||||| 
Sbjct: 103 aagaaagtcattgcaagcatgacagtcggaaaagatgtcagctctctgtttccagatgtg 162

                                                    
Query: 387 gtgaactgtatgcagactgagaacttggagctgaaaaaact 427
           |||||||| ||||||||||| ||| | |||||||| |||||
Sbjct: 163 gtgaactgcatgcagactgacaaccttgagctgaagaaact 203



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>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4
          Length = 340552

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                          
Query: 336    attgcagcaatgactgttggaaaagatgtctcatcattgtttacggatgttgtgaactgt 395
              ||||| || ||||||||||| |||||||||||  |||| ||| | ||||||||||| || 
Sbjct: 158436 attgctgctatgactgttgggaaagatgtctcgacattattttctgatgttgtgaattgc 158377

                   
Query: 396    atgca 400
              |||||
Sbjct: 158376 atgca 158372



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>gb|AC135795.21| Medicago truncatula clone mth2-28g10, complete sequence
          Length = 110937

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 229   acgactccaagtacttctccaccaccaaaaagggggagatccccgagct 277
             |||||||||||||||||||| |||| || ||||| || ||||| |||||
Sbjct: 11116 acgactccaagtacttctcccccacgaagaagggtgaaatccctgagct 11164



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>gb|AC150889.3| Medicago truncatula chromosome 7 BAC clone mte1-61j12, complete
             sequence
          Length = 116517

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 229   acgactccaagtacttctccaccaccaaaaagggggagatccccgagct 277
             |||||||||||||||||||| |||| || ||||| || ||||| |||||
Sbjct: 13047 acgactccaagtacttctcccccacgaagaagggtgaaatccctgagct 12999



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>ref|XM_681550.1| PREDICTED: Danio rerio similar to adaptor-related protein complex
           2, beta 1 subunit, transcript variant 1 (LOC562166),
           mRNA
          Length = 4547

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaagatgtctcatcattgtttacg 380
           ||||| ||||| || |||||| | ||||| |||||||||||||||    |  ||||| | 
Sbjct: 371 gctgtgaagaaggtcattgcatctatgaccgttggaaaagatgtcagtgctctgtttcct 430

                                                       
Query: 381 gatgttgtgaactgtatgcagactgagaacttggagctgaaaaa 424
           |||||||| ||||| |||||||| || ||| |||| ||||||||
Sbjct: 431 gatgttgtcaactgcatgcagacagataacctggaactgaaaaa 474



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>dbj|AB169049.1| Macaca fascicularis testis cDNA, clone: QtsA-16864, similar to
           human adaptor-related protein complex 2, beta 1
           subunit(AP2B1), mRNA, RefSeq: NM_001282.1
          Length = 1322

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 309 aagagaaaagatgctgtcaagaaagtgattgcagcaatgactgt 352
           |||||||| || ||||| |||||||||||||| || ||||||||
Sbjct: 206 aagagaaaggaggctgtgaagaaagtgattgctgctatgactgt 249



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>ref|XM_582607.2| PREDICTED: Bos taurus similar to adaptor-related protein complex 1
           beta 1 subunit isoform b, transcript variant 1
           (LOC506192), mRNA
          Length = 3846

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 183 gtgaactgtatgcagacagacaacctggagctgaa 217



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>ref|XM_865584.1| PREDICTED: Bos taurus similar to adaptor-related protein complex 1
           beta 1 subunit isoform b, transcript variant 2
           (LOC506192), mRNA
          Length = 3816

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 183 gtgaactgtatgcagacagacaacctggagctgaa 217



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>ref|XM_876374.1| PREDICTED: Bos taurus similar to adaptor-related protein complex 1
           beta 1 subunit isoform b, transcript variant 8
           (LOC506192), mRNA
          Length = 3837

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 183 gtgaactgtatgcagacagacaacctggagctgaa 217



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>ref|XM_876313.1| PREDICTED: Bos taurus similar to adaptor-related protein complex 1
           beta 1 subunit isoform b, transcript variant 7
           (LOC506192), mRNA
          Length = 4076

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 452 gtgaactgtatgcagacagacaacctggagctgaa 486



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>ref|XM_876248.1| PREDICTED: Bos taurus similar to adaptor-related protein complex 1
           beta 1 subunit isoform b, transcript variant 6
           (LOC506192), mRNA
          Length = 3858

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 183 gtgaactgtatgcagacagacaacctggagctgaa 217



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>ref|XM_876183.1| PREDICTED: Bos taurus similar to adaptor-related protein complex 1
           beta 1 subunit isoform b, transcript variant 5
           (LOC506192), mRNA
          Length = 3801

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 183 gtgaactgtatgcagacagacaacctggagctgaa 217



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>ref|XM_876061.1| PREDICTED: Bos taurus similar to adaptor-related protein complex 1
           beta 1 subunit isoform b, transcript variant 3
           (LOC506192), mRNA
          Length = 3807

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 183 gtgaactgtatgcagacagacaacctggagctgaa 217



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>ref|XR_003087.1| PREDICTED: Mus musculus similar to adaptor-related protein complex
           2, beta 1 subunit (LOC384042), mRNA
          Length = 2853

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 381 gatgttgtgaactgtatgcagactgagaacttgga 415
           ||||| |||||||||||||||||||| ||| ||||
Sbjct: 182 gatgtggtgaactgtatgcagactgacaacctgga 216



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>ref|XM_860149.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 1 beta 1 subunit isoform b, transcript variant 4
           (LOC486344), mRNA
          Length = 2969

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 303 gtgaactgtatgcagacagacaacctggagctgaa 337



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>ref|XM_847105.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 1 beta 1 subunit isoform b, transcript variant 3
           (LOC486344), mRNA
          Length = 2990

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 303 gtgaactgtatgcagacagacaacctggagctgaa 337



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>ref|XM_543470.2| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 1 beta 1 subunit isoform b, transcript variant 1
           (LOC486344), mRNA
          Length = 2960

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 303 gtgaactgtatgcagacagacaacctggagctgaa 337



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>ref|NM_080583.1| Rattus norvegicus adaptor-related protein complex 2, beta 1 subunit
           (Ap2b1), mRNA
          Length = 5413

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 381 gatgttgtgaactgtatgcagactgagaacttgga 415
           ||||| |||||||||||||||||||| ||| ||||
Sbjct: 296 gatgtggtgaactgtatgcagactgacaacctgga 330



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>gb|BC103481.1| Rattus norvegicus adaptor-related protein complex 2, beta 1
           subunit, mRNA (cDNA clone MGC:124574 IMAGE:7929959),
           complete cds
          Length = 5394

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 381 gatgttgtgaactgtatgcagactgagaacttgga 415
           ||||| |||||||||||||||||||| ||| ||||
Sbjct: 265 gatgtggtgaactgtatgcagactgacaacctgga 299



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>emb|Z83839.1|HS127L4 Human DNA sequence from clone RP1-127L4 on chromosome 22 Contains the
             3' end of the SLC5A1 gene for solute carrier family 5
             (sodiumglucose transporter)  member 1, an adaptin, beta
             1-like 1 pseudogene (ADTB1L1), an adaptin, beta 1-like 2
             pseudogene (ADTB1L2) and the 3' end of a novel gene,
             complete sequence
          Length = 47812

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 327   aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
             ||||||||||||||| ||||||| || || |||||||||
Sbjct: 24660 aagaaagtgattgcatcaatgaccgtgggcaaagatgtc 24698



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>gb|BC105429.1| Bos taurus similar to adaptor-related protein complex 1 beta 1
           subunit isoform b, mRNA (cDNA clone MGC:128441
           IMAGE:7984158), complete cds
          Length = 4015

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 387 gtgaactgtatgcagactgagaacttggagctgaa 421
           ||||||||||||||||| || ||| ||||||||||
Sbjct: 303 gtgaactgtatgcagacagacaacctggagctgaa 337



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>gb|AC118772.5| Rattus norvegicus 10 BAC CH230-404C20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 178272

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 381   gatgttgtgaactgtatgcagactgagaacttgga 415
             ||||| |||||||||||||||||||| ||| ||||
Sbjct: 35080 gatgtggtgaactgtatgcagactgacaacctgga 35046



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>ref|NG_002624.1| Homo sapiens adaptin, beta 1-like 2 (ADTB1L2) pseudogene on
           chromosome 22
          Length = 302

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| ||||||| || || |||||||||
Sbjct: 167 aagaaagtgattgcatcaatgaccgtgggcaaagatgtc 205



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>ref|NM_017277.1| Rattus norvegicus adaptor protein complex AP-1, beta 1 subunit
           (Ap1b1), mRNA
          Length = 3679

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| ||||||| || || |||||||||
Sbjct: 142 aagaaagtgattgcatcaatgaccgtgggcaaagatgtc 180



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>gb|M77246.1|RATBCCAPB R.norvegicus beta-chain clathrin associated protein complex AP-2
           mRNA, complete cds
          Length = 5413

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 381 gatgttgtgaactgtatgcagactgagaacttgga 415
           ||||| |||||||||||||||||||| ||| ||||
Sbjct: 296 gatgtggtgaactgtatgcagactgacaacctgga 330



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>gb|M77245.1|RATBCCAPA R.norvegicus beta'-chain clathrin associated protein complex AP-1
           mRNA, complete cds
          Length = 3679

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgtc 365
           ||||||||||||||| ||||||| || || |||||||||
Sbjct: 142 aagaaagtgattgcatcaatgaccgtgggcaaagatgtc 180



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>gb|M34176.1|RATBADPTA Rat beta adaptin mRNA, complete cds
          Length = 3477

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 381 gatgttgtgaactgtatgcagactgagaacttgga 415
           ||||| |||||||||||||||||||| ||| ||||
Sbjct: 228 gatgtggtgaactgtatgcagactgacaacctgga 262



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 168 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 208



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>emb|AL645473.12| Mouse DNA sequence from clone RP23-246H17 on chromosome 4, complete
              sequence
          Length = 162757

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 381    gatgttgtgaactgtatgcagactgagaacttgga 415
              ||||| |||||||||||||||||||| ||| ||||
Sbjct: 151299 gatgtggtgaactgtatgcagactgacaacctgga 151265



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>ref|XM_636754.1| Dictyostelium discoideum hypothetical protein (DDB0204689), partial
           mRNA
          Length = 2829

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 327 aagaaagtgattgcagcaatgactgttggaaaagatgt 364
           ||||| || |||||||||||||| ||||| ||||||||
Sbjct: 103 aagaaggtaattgcagcaatgacagttggtaaagatgt 140



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>ref|XM_848630.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 3
           (LOC480605), mRNA
          Length = 3379

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862736.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 18
           (LOC480605), mRNA
          Length = 3346

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862726.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 17
           (LOC480605), mRNA
          Length = 3370

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862718.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 16
           (LOC480605), mRNA
          Length = 3280

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862711.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 15
           (LOC480605), mRNA
          Length = 3319

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862704.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 14
           (LOC480605), mRNA
          Length = 3328

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862697.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 13
           (LOC480605), mRNA
          Length = 3256

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_537725.2| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 2
           (LOC480605), mRNA
          Length = 3400

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862680.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 12
           (LOC480605), mRNA
          Length = 3292

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862671.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 11
           (LOC480605), mRNA
          Length = 3334

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862664.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 10
           (LOC480605), mRNA
          Length = 3338

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862654.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 9
           (LOC480605), mRNA
          Length = 3353

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862645.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 8
           (LOC480605), mRNA
          Length = 3289

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862634.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 7
           (LOC480605), mRNA
          Length = 3238

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862614.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 5
           (LOC480605), mRNA
          Length = 811

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 236 gctgtgaagaaagtgattgctgccatgactgtgggaaa 273



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>ref|XM_862605.1| PREDICTED: Canis familiaris similar to adaptor-related protein
           complex 2, beta 1 subunit, transcript variant 4
           (LOC480605), mRNA
          Length = 3350

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaa 358
           ||||| |||||||||||||| || |||||||| |||||
Sbjct: 249 gctgtgaagaaagtgattgctgccatgactgtgggaaa 286



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>emb|CR385856.1| Gallus gallus finished cDNA, clone ChEST206j22
          Length = 1682

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 381 gatgttgtgaactgtatgcagactga 406
           |||||||||||||| |||||||||||
Sbjct: 45  gatgttgtgaactgcatgcagactga 70



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>dbj|AP000824.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-678L3, complete
             sequence
          Length = 186915

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 315   aaagatgctgtcaagaaagtga 336
             ||||||||||||||||||||||
Sbjct: 20320 aaagatgctgtcaagaaagtga 20299



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>dbj|AP003486.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-890B15, complete
             sequence
          Length = 217479

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 315   aaagatgctgtcaagaaagtga 336
             ||||||||||||||||||||||
Sbjct: 90980 aaagatgctgtcaagaaagtga 90959



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>ref|NM_001030006.1| Homo sapiens adaptor-related protein complex 2, beta 1 subunit
           (AP2B1), transcript variant 1, mRNA
          Length = 5772

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 309 aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
           |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 274 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 314



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 gtgaactgtatgcagactga 406
           ||||||||||||||||||||
Sbjct: 352 gtgaactgtatgcagactga 371



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>ref|NM_001282.2| Homo sapiens adaptor-related protein complex 2, beta 1 subunit
           (AP2B1), transcript variant 2, mRNA
          Length = 5730

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 309 aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
           |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 274 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 314



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 gtgaactgtatgcagactga 406
           ||||||||||||||||||||
Sbjct: 352 gtgaactgtatgcagactga 371



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>ref|XM_511415.1| PREDICTED: Pan troglodytes similar to adaptor-related protein
           complex 2, beta 1 subunit; beta adaptin (LOC454587),
           mRNA
          Length = 3324

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 309 aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
           |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 514 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 554



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 gtgaactgtatgcagactga 406
           ||||||||||||||||||||
Sbjct: 592 gtgaactgtatgcagactga 611



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>ref|XM_866869.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 2 (AP2B1), mRNA
          Length = 5536

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_879185.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 15 (AP2B1), mRNA
          Length = 5434

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_879164.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 14 (AP2B1), mRNA
          Length = 5476

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_879135.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 13 (AP2B1), mRNA
          Length = 5497

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_879107.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 12 (AP2B1), mRNA
          Length = 5485

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_879081.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 11 (AP2B1), mRNA
          Length = 5413

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_879048.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 10 (AP2B1), mRNA
          Length = 5479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_879012.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 9 (AP2B1), mRNA
          Length = 5491

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_878986.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 8 (AP2B1), mRNA
          Length = 5446

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_591504.2| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 1 (AP2B1), mRNA
          Length = 2947

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_878933.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 7 (AP2B1), mRNA
          Length = 5380

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 206 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 246



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>ref|XM_878905.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 6 (AP2B1), mRNA
          Length = 1799

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_878878.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 5 (AP2B1), mRNA
          Length = 5494

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 221 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 261



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>ref|XM_878849.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 4 (AP2B1), mRNA
          Length = 5479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 206 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 246



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>ref|XM_878816.1| PREDICTED: Bos taurus adaptor-related protein complex 2, beta 1
           subunit, transcript variant 3 (AP2B1), mRNA
          Length = 5479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 206 gctgtgaagaaagtgattgctgctatgactgtggggaaaga 246



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>gb|AY341427.1| Homo sapiens beta adaptin subunit mRNA, complete cds; alternatively
           spliced
          Length = 3457

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 309 aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
           |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 223 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 263



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 gtgaactgtatgcagactga 406
           ||||||||||||||||||||
Sbjct: 387 gtgaactgtatgcagactga 406



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>emb|AL136124.10| Human DNA sequence from clone RP4-792D7 on chromosome 1q42.2-43
             Contains the 5' end of the TARBP1 gene for TAR (HIV) RNA
             binding protein 1 and a CpG island, complete sequence
          Length = 104632

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 310   agagaaaagatgctgtcaagaaagt 334
             |||||||||||||| ||||||||||
Sbjct: 56000 agagaaaagatgctttcaagaaagt 56024



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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 167    agccggaggcggtgaccggtgtgta 191
              |||||| ||||||||||||||||||
Sbjct: 233754 agccgggggcggtgaccggtgtgta 233730



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>gb|AF367600.1| Merxmuellera disticha internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence
          Length = 597

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 107 ggcaggccgcccgccaccgcgcgca 131
           ||||||||| |||||||||||||||
Sbjct: 190 ggcaggccgaccgccaccgcgcgca 166



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>emb|CR860139.1| Pongo pygmaeus mRNA; cDNA DKFZp469O1619 (from clone DKFZp469O1619)
          Length = 3352

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 309 aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
           |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 226 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 266



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 gtgaactgtatgcagactga 406
           ||||||||||||||||||||
Sbjct: 304 gtgaactgtatgcagactga 323



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>emb|CR749392.1| Homo sapiens mRNA; cDNA DKFZp781K0743 (from clone DKFZp781K0743)
          Length = 3487

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 309 aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
           |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 257 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 297



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 gtgaactgtatgcagactga 406
           ||||||||||||||||||||
Sbjct: 335 gtgaactgtatgcagactga 354



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>gb|AC161478.5| Pan troglodytes BAC clone CH251-170F20 from chromosome unknown, complete
              sequence
          Length = 150487

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 309    aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
              |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 111517 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 111477



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    gtgaactgtatgcagactga 406
              ||||||||||||||||||||
Sbjct: 104055 gtgaactgtatgcagactga 104036



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>gb|AC159215.2| Pan troglodytes BAC clone CH251-458G5 from chromosome unknown, complete
              sequence
          Length = 208565

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 309    aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
              |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 113927 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 113967



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    gtgaactgtatgcagactga 406
              ||||||||||||||||||||
Sbjct: 121390 gtgaactgtatgcagactga 121409



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>emb|BX664747.11| Zebrafish DNA sequence from clone CH211-149D1 in linkage group 5,
             complete sequence
          Length = 115297

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 321   gctgtcaagaaagtgattgcagcaatgactgttggaaaagatgtc 365
             ||||| ||||| || |||||| | ||||| |||||||||||||||
Sbjct: 54058 gctgtgaagaaggtcattgcatctatgaccgttggaaaagatgtc 54102



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>gb|AC019231.7| Homo sapiens BAC clone RP11-573O16 from 2, complete sequence
          Length = 187268

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 308   taagagaaaagatgctgtcaa 328
             |||||||||||||||||||||
Sbjct: 67461 taagagaaaagatgctgtcaa 67441



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>gb|AC004134.1|AC004134 Homo sapiens chromosome 17, clone hCIT.507_E_2, complete sequence
          Length = 119307

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 309    aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
              |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 109556 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 109516



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    gtgaactgtatgcagactga 406
              ||||||||||||||||||||
Sbjct: 102109 gtgaactgtatgcagactga 102090



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>gb|BC006201.2| Homo sapiens adaptor-related protein complex 2, beta 1 subunit,
           mRNA (cDNA clone MGC:3632 IMAGE:3532472), complete cds
          Length = 3427

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 309 aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
           |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 181 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 221



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 gtgaactgtatgcagactga 406
           ||||||||||||||||||||
Sbjct: 259 gtgaactgtatgcagactga 278



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>gb|M34175.1|HUMBADPTA Human beta adaptin mRNA, complete cds
          Length = 5701

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 309 aagagaaaagatgctgtcaagaaagtgattgcagcaatgac 349
           |||||||| || ||||| |||||||||||||| || |||||
Sbjct: 262 aagagaaaggaggctgtgaagaaagtgattgctgctatgac 302



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 gtgaactgtatgcagactga 406
           ||||||||||||||||||||
Sbjct: 340 gtgaactgtatgcagactga 359



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>gb|M34177.1|BOVBADPTA Cow beta adaptin mRNA, partial cds
          Length = 708

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 321 gctgtcaagaaagtgattgcagcaatgactgttggaaaaga 361
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 1   gctgtgaagaaagtgattgctgctatgactgtggggaaaga 41



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>gb|AY819719.1| Sugarcane mosaic virus isolate FER-1 capsid protein (cp) gene,
           partial cds
          Length = 851

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AY819718.1| Sugarcane mosaic virus isolate PIR-2 capsid protein (cp) gene,
           partial cds
          Length = 886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness
             locus region
          Length = 160897

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   accaccaaaaagggggagat 268
             ||||||||||||||||||||
Sbjct: 38218 accaccaaaaagggggagat 38199



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>gb|DQ227694.1| Sugarcane mosaic virus isolate GX-1 polyprotein gene, partial cds
          Length = 906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 93  agctcaaggaggagctcaac 112



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>ref|XM_473310.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 609

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 10  ctccctcccgatctgtctga 29
           ||||||||||||||||||||
Sbjct: 364 ctccctcccgatctgtctga 383



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>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete
             sequence
          Length = 906719

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 423   aaactagtatacttatatctcatcaactatgc 454
             ||||| ||||| ||||||||||| ||||||||
Sbjct: 49258 aaactcgtatatttatatctcatgaactatgc 49227



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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
             sequence
          Length = 1194300

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 423   aaactagtatacttatatctcatcaactatgc 454
             ||||| ||||| ||||||||||| ||||||||
Sbjct: 13734 aaactcgtatatttatatctcatgaactatgc 13765



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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
             genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   agaacttggagctgaaaaaa 425
             ||||||||||||||||||||
Sbjct: 64970 agaacttggagctgaaaaaa 64951



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>ref|XM_426433.1| PREDICTED: Gallus gallus similar to Butyrate response factor 1
           (TIS11B protein) (EGF-inducible protein CMG1)
           (LOC428877), mRNA
          Length = 1326

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 ggccgcccgccaccgcgcgc 130
           ||||||||||||||||||||
Sbjct: 877 ggccgcccgccaccgcgcgc 858



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>gb|AY590778.1| Sugarcane mosaic virus polyprotein mRNA, partial cds
          Length = 1812

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 717 agctcaaggaggagctcaac 736



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>ref|XM_755086.1| Ustilago maydis 521 hypothetical protein (UM04032.1) partial mRNA
          Length = 2547

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 275  gctcaaggaggagctcaact 294
            ||||||||||||||||||||
Sbjct: 993  gctcaaggaggagctcaact 1012



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>ref|XM_567942.1| Cryptococcus neoformans var. neoformans JEC21 clathrin binding
           protein (CNL03830) partial mRNA
          Length = 2435

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 423 aaactagtatacttatatctcatcaactatgc 454
           ||||| ||||| ||||||||||| ||||||||
Sbjct: 319 aaactcgtatatttatatctcatgaactatgc 350



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>ref|XM_567943.1| Cryptococcus neoformans var. neoformans JEC21 clathrin binding
           protein (CNL03830) partial mRNA
          Length = 2366

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 423 aaactagtatacttatatctcatcaactatgc 454
           ||||| ||||| ||||||||||| ||||||||
Sbjct: 319 aaactcgtatatttatatctcatgaactatgc 350



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>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 402    actgagaacttggagctgaaaaaa 425
              |||||||| |||||||||||||||
Sbjct: 203554 actgagaagttggagctgaaaaaa 203577



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>ref|XM_572541.1| Cryptococcus neoformans var. neoformans JEC21 clathrin binding
           protein (CNH03830) partial mRNA
          Length = 2435

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 423 aaactagtatacttatatctcatcaactatgc 454
           ||||| ||||| ||||||||||| ||||||||
Sbjct: 319 aaactcgtatatttatatctcatgaactatgc 350



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>ref|XM_572542.1| Cryptococcus neoformans var. neoformans JEC21 clathrin binding
           protein (CNH03830) partial mRNA
          Length = 2366

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 423 aaactagtatacttatatctcatcaactatgc 454
           ||||| ||||| ||||||||||| ||||||||
Sbjct: 319 aaactcgtatatttatatctcatgaactatgc 350



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>gb|DQ141605.1| Sugarcane mosaic virus polyprotein mRNA, partial cds
          Length = 2116

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  agctcaaggaggagctcaac 293
            ||||||||||||||||||||
Sbjct: 1950 agctcaaggaggagctcaac 1969



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>gb|AC102431.7| Mus musculus chromosome 14, clone RP24-106J1, complete sequence
          Length = 157923

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 402    actgagaacttggagctgaaaaaa 425
              |||||||| |||||||||||||||
Sbjct: 107441 actgagaagttggagctgaaaaaa 107418



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>emb|AM040436.1| Sugarcane mosaic virus partial cp gene for coat protein, genomic
           RNA
          Length = 888

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>emb|AL359263.13| Human DNA sequence from clone RP13-88F20 on chromosome X Contains an
             adaptor-related protein complex 2, beta 1 subunit (AP2B1)
             pseudogene, complete sequence
          Length = 69518

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 309   aagagaaaagatgctgtcaagaaagtgattgc 340
             |||||||| || ||||| ||||||||||||||
Sbjct: 56270 aagagaaaggaggctgtgaagaaagtgattgc 56239



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   gtgaactgtatgcagactga 406
             ||||||||||||||||||||
Sbjct: 56192 gtgaactgtatgcagactga 56173



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>gb|AC096051.7| Rattus norvegicus 10 BAC CH230-21G1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 216194

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   ttctccaccaccaaaaaggg 262
             ||||||||||||||||||||
Sbjct: 73276 ttctccaccaccaaaaaggg 73257



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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   agaacttggagctgaaaaaa 425
             ||||||||||||||||||||
Sbjct: 65039 agaacttggagctgaaaaaa 65020



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>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11,
             complete sequence
          Length = 113677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ctccctcccgatctgtctga 29
             ||||||||||||||||||||
Sbjct: 87504 ctccctcccgatctgtctga 87523



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>emb|AJ278405.1|SMO278405 Sugarcane mosaic virus genomic RNA for polyprotein (vp gene), strain
            A, isolate Brisbane
          Length = 9589

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  agctcaaggaggagctcaac 293
            ||||||||||||||||||||
Sbjct: 8472 agctcaaggaggagctcaac 8491



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>gb|AC158645.6| Mus musculus 6 BAC RP23-435I16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 177739

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    actctcgcacgcacgcacac 57
             ||||||||||||||||||||
Sbjct: 70004 actctcgcacgcacgcacac 70023



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>gb|DQ438949.1| Sugarcane mosaic virus isolate KhzQ86 polyprotein gene, partial
           cds; and 3' UTR
          Length = 1815

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 717 agctcaaggaggagctcaac 736



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>gb|AC020912.6| Homo sapiens chromosome 19 clone CTD-2583G20, complete sequence
          Length = 163225

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    agtacttctccaccaccaaa 257
              ||||||||||||||||||||
Sbjct: 135966 agtacttctccaccaccaaa 135985



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>gb|U78045.1|HSU78045 Human collagenase and stromelysin genes, complete cds, and
             metalloelastase gene, partial cds
          Length = 81826

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    cgcacgcacgcacacccgcc 62
             ||||||||||||||||||||
Sbjct: 60689 cgcacgcacgcacacccgcc 60708



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>gb|DQ369960.1| Sugarcane mosaic virus isolate KhzL66 polyprotein gene, partial cds
          Length = 2002

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 903 agctcaaggaggagctcaac 922



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>gb|AY836523.1| Sugarcane mosaic virus strain E polyprotein gene, partial cds
          Length = 1795

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 697 agctcaaggaggagctcaac 716



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 10       ctccctcccgatctgtctga 29
                ||||||||||||||||||||
Sbjct: 26695691 ctccctcccgatctgtctga 26695672



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 10       ctccctcccgatctgtctga 29
                ||||||||||||||||||||
Sbjct: 16630140 ctccctcccgatctgtctga 16630121



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 10      ctccctcccgatctgtctga 29
               ||||||||||||||||||||
Sbjct: 1223988 ctccctcccgatctgtctga 1223969



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>gb|AY241923.1| Sugarcane mosaic virus nonfunctional polyprotein mRNA, partial
           sequence
          Length = 1330

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 231 agctcaaggaggagctcaac 250



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>gb|AF090447.2| Zea mays 22 kDa alpha zein gene cluster, complete sequence
          Length = 346296

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    accaccaaaaagggggagat 268
              ||||||||||||||||||||
Sbjct: 317303 accaccaaaaagggggagat 317322



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 107     ggcaggccgcccgccaccgcgcgc 130
               ||||| ||||||||||||||||||
Sbjct: 2240950 ggcagcccgcccgccaccgcgcgc 2240973



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>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   accaccaaaaagggggagat 268
             ||||||||||||||||||||
Sbjct: 35304 accaccaaaaagggggagat 35323



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>gb|DQ343236.1| Sugarcane mosaic virus nonfunctional coat protein gene, complete
           sequence
          Length = 899

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 85  agctcaaggaggagctcaac 104



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>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0542E10
          Length = 146196

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ctccctcccgatctgtctga 29
             ||||||||||||||||||||
Sbjct: 75941 ctccctcccgatctgtctga 75922



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>gb|AY953351.1| Sugarcane mosaic virus strain D polyprotein mRNA, partial cds
          Length = 1368

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 273 agctcaaggaggagctcaac 292



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>emb|AJ491974.1|SMO491974 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate ZAF 54-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



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>emb|AJ491973.1|SMO491973 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate ZAF 53-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



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>emb|AJ491972.1|SMO491972 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate ZAF 52-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



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>emb|AJ491970.1|SMO491970 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate USA Lou 45-1
          Length = 840

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



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>emb|AJ491969.1|SMO491969 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate USA Lou 44-1
          Length = 840

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



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>emb|AJ491968.1|SMO491968 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate USA Lou 43-1
          Length = 840

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491967.1|SMO491967 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate USA Lou 42-1
          Length = 840

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491966.1|SMO491966 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate USA Lou 41-1
          Length = 828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491965.1|SMO491965 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate USA Lou 40-1
          Length = 828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491964.1|SMO491964 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate USA Flo 8-1
          Length = 840

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491963.1|SMO491963 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate EGY7-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491959.1|SMO491959 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate CON12-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491956.1|SMO491956 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate CON111-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491955.1|SMO491955 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate CON110-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491954.1|SMO491954 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate CON11-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491953.1|SMO491953 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate CON109-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491952.1|SMO491952 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate CON108-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491950.1|SMO491950 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate CON106-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491949.1|SMO491949 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate CON105-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491948.1|SMO491948 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate CON104-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>emb|AJ491943.1|SMO491943 Sugarcane mosaic virus partial cp gene for capsid protein, genomic
           RNA, isolate CON10-1
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 63  agctcaaggaggagctcaac 82



to top

>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1014_E02
          Length = 159669

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     ctccctcccgatctgtctga 29
              ||||||||||||||||||||
Sbjct: 101964 ctccctcccgatctgtctga 101945



to top

>dbj|AP005464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:B1027A11
          Length = 169506

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ctccctcccgatctgtctga 29
            ||||||||||||||||||||
Sbjct: 6050 ctccctcccgatctgtctga 6031



to top

>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210862

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     cgcacgcacgcacacccgcc 62
              ||||||||||||||||||||
Sbjct: 148601 cgcacgcacgcacacccgcc 148620



to top

>emb|AL049829.4|CNS0000B Human chromosome 14 DNA sequence BAC R-124D2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196292

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    aaaagatgctgtcaagaaag 333
              ||||||||||||||||||||
Sbjct: 114981 aaaagatgctgtcaagaaag 114962



to top

>gb|DQ316252.1| Sugarcane mosaic virus isolate wd-sg polyprotein gene, partial cds
          Length = 862

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 93  agctcaaggaggagctcaac 112



to top

>gb|DQ316251.1| Sugarcane mosaic virus isolate wd-dz polyprotein gene, partial cds
          Length = 866

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 94  agctcaaggaggagctcaac 113



to top

>gb|DQ316250.1| Sugarcane mosaic virus isolate so-bl6 polyprotein gene, partial cds
          Length = 859

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 86  agctcaaggaggagctcaac 105



to top

>gb|DQ316249.1| Sugarcane mosaic virus isolate so-bl5 polyprotein gene, partial cds
          Length = 860

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 93  agctcaaggaggagctcaac 112



to top

>gb|DQ316248.1| Sugarcane mosaic virus isolate so-bl4 polyprotein gene, partial cds
          Length = 892

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 87  agctcaaggaggagctcaac 106



to top

>gb|DQ316247.1| Sugarcane mosaic virus isolate so-bl2 polyprotein gene, partial cds
          Length = 851

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 53  agctcaaggaggagctcaac 72



to top

>gb|DQ316244.1| Sugarcane mosaic virus isolate sh-wy polyprotein gene, partial cds
          Length = 822

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 54  agctcaaggaggagctcaac 73



to top

>gb|DQ316243.1| Sugarcane mosaic virus isolate sh-sx polyprotein gene, partial cds
          Length = 842

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 71  agctcaaggaggagctcaac 90



to top

>gb|DQ316242.1| Sugarcane mosaic virus isolate sh-nn polyprotein gene, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 47  agctcaaggaggagctcaac 66



to top

>gb|DQ316240.1| Sugarcane mosaic virus isolate sh-hp2 polyprotein gene, partial cds
          Length = 859

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 93  agctcaaggaggagctcaac 112



to top

>gb|DQ316239.1| Sugarcane mosaic virus isolate sh-hp1 polyprotein gene, partial cds
          Length = 856

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 93  agctcaaggaggagctcaac 112



to top

>gb|DQ316238.1| Sugarcane mosaic virus isolate sh-gz4 polyprotein gene, partial cds
          Length = 843

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 86  agctcaaggaggagctcaac 105



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>gb|DQ316236.1| Sugarcane mosaic virus isolate sh-gz2 polyprotein gene, partial cds
          Length = 854

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 87  agctcaaggaggagctcaac 106



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>gb|DQ316235.1| Sugarcane mosaic virus isolate sh-gz1 polyprotein gene, partial cds
          Length = 860

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 87  agctcaaggaggagctcaac 106



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>gb|DQ316234.1| Sugarcane mosaic virus isolate sh-dz polyprotein gene, partial cds
          Length = 780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 48  agctcaaggaggagctcaac 67



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>gb|DQ316232.1| Sugarcane mosaic virus isolate mz-gz2 polyprotein gene, partial cds
          Length = 828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 78  agctcaaggaggagctcaac 97



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>gb|AF006738.1|AF006738 Sugarcane mosaic virus coat protein gene, partial cds
          Length = 942

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AF006737.1|AF006737 Sugarcane mosaic virus coat protein gene, partial cds
          Length = 942

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AF006736.1|AF006736 Sugarcane mosaic virus coat protein gene, partial cds
          Length = 918

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AF006735.1|AF006735 Sugarcane mosaic virus coat protein gene, partial cds
          Length = 942

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AF006733.1|AF006733 Sugarcane mosaic virus coat protein gene, partial cds
          Length = 921

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AF006732.1|AF006732 Sugarcane mosaic virus coat protein gene, partial cds
          Length = 921

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AF006731.1|AF006731 Sugarcane mosaic virus coat protein gene, partial cds
          Length = 942

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AF006730.1|AF006730 Sugarcane mosaic virus coat protein gene, partial cds
          Length = 921

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AF006729.1|AF006729 Sugarcane mosaic virus coat protein gene, partial cds
          Length = 903

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|AF006728.1|AF006728 Sugarcane mosaic virus coat protein gene, partial cds
          Length = 942

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 75  agctcaaggaggagctcaac 94



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>gb|U57354.1|SMU57354 Sugarcane mosaic virus strain A polyprotein mRNA, partial cds
          Length = 1977

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 903 agctcaaggaggagctcaac 922



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>gb|U57357.1|SMU57357 Sugarcane mosaic virus strain E polyprotein mRNA, partial cds
          Length = 2001

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 903 agctcaaggaggagctcaac 922



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>gb|U57356.1|SMU57356 Sugarcane mosaic virus strain D polyprotein mRNA, partial cds
          Length = 1989

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 903 agctcaaggaggagctcaac 922



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>gb|M21778.1|PIJ101CG Plasmid pIJ101 (from S.lividans), complete genome
          Length = 8830

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   cgcctggctccccctcgccg 78
            ||||||||||||||||||||
Sbjct: 3305 cgcctggctccccctcgccg 3286



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>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete
              sequence
          Length = 172826

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    ctgagaacttggagctgaaa 422
              ||||||||||||||||||||
Sbjct: 126920 ctgagaacttggagctgaaa 126939



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>dbj|D00948.1|MSCCP Sugarcane mosaic virus mRNA for coat protein, partial cds
          Length = 1330

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 agctcaaggaggagctcaac 293
           ||||||||||||||||||||
Sbjct: 231 agctcaaggaggagctcaac 250


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,758,365
Number of Sequences: 3902068
Number of extensions: 3758365
Number of successful extensions: 128756
Number of sequences better than 10.0: 225
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128090
Number of HSP's gapped (non-prelim): 655
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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