Clone Name | bastl20c03 |
---|---|
Clone Library Name | barley_pub |
>gb|BT018525.1| Zea mays clone EL01N0432G12.d mRNA sequence Length = 1695 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 356 ttctgctccgtccggcgcttcgcagg 381 |||||||||||||||||||||||||| Sbjct: 243 ttctgctccgtccggcgcttcgcagg 268
>gb|AY106153.1| Zea mays PCO079304 mRNA sequence Length = 1709 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 356 ttctgctccgtccggcgcttcgcagg 381 |||||||||||||||||||||||||| Sbjct: 297 ttctgctccgtccggcgcttcgcagg 322
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 356 ttctgctccgtccggcgcttcgcaggagatagcgccgccgccgctgccgtcgaggaaccg 415 ||||||||||||||||| ||| | || || ||| ||||||||| ||||||||||| || Sbjct: 4208572 ttctgctccgtccggcgtttcaccggggagagcaacgccgccgccgccgtcgaggaggcg 4208631 Query: 416 gagaa 420 ||||| Sbjct: 4208632 gagaa 4208636 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 17827064 cgccgccgccgctgccgtcg 17827083 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 6353406 cgccgccgccgctgccgtcg 6353387
>gb|AC012262.15| Homo sapiens 3 BAC RP11-413C12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153860 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 47 tgcttcttctcttctttccttttct 71 ||||||||||||||||||||||||| Sbjct: 80811 tgcttcttctcttctttccttttct 80835
>dbj|AK064862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I03, full insert sequence Length = 1725 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 356 ttctgctccgtccggcgcttcgcaggagatagcgccgccgccgctgccgtcgaggaaccg 415 ||||||||||||||||| ||| | || || ||| ||||||||| ||||||||||| || Sbjct: 276 ttctgctccgtccggcgtttcaccggggagagcaacgccgccgccgccgtcgaggaggcg 335 Query: 416 gagaa 420 ||||| Sbjct: 336 gagaa 340
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 356 ttctgctccgtccggcgcttcgcaggagatagcgccgccgccgctgccgtcgaggaaccg 415 ||||||||||||||||| ||| | || || ||| ||||||||| ||||||||||| || Sbjct: 4208559 ttctgctccgtccggcgtttcaccggggagagcaacgccgccgccgccgtcgaggaggcg 4208618 Query: 416 gagaa 420 ||||| Sbjct: 4208619 gagaa 4208623 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 17753383 cgccgccgccgctgccgtcg 17753402 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 6353281 cgccgccgccgctgccgtcg 6353262
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 356 ttctgctccgtccggcgcttcgcaggagatagcgccgccgccgctgccgtcgaggaaccg 415 ||||||||||||||||| ||| | || || ||| ||||||||| ||||||||||| || Sbjct: 75211 ttctgctccgtccggcgtttcaccggggagagcaacgccgccgccgccgtcgaggaggcg 75152 Query: 416 gagaa 420 ||||| Sbjct: 75151 gagaa 75147
>gb|AC161212.9| Mus musculus chromosome 3, clone RP24-267M11, complete sequence Length = 147921 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 40 cttcgcttgcttcttctcttctttccttttct 71 |||| |||||||||| |||||||||||||||| Sbjct: 129068 cttctcttgcttcttatcttctttccttttct 129099
>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence Length = 209838 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 49 cttcttctcttctttccttttctc 72 |||||||||||||||||||||||| Sbjct: 182272 cttcttctcttctttccttttctc 182295
>gb|AC115303.6| Mus musculus BAC clone RP24-108I6 from chromosome 1, complete sequence Length = 192812 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 49 cttcttctcttctttccttttctc 72 |||||||||||||||||||||||| Sbjct: 7165 cttcttctcttctttccttttctc 7188
>gb|AC068947.17| Mus Musculus Strain C57BL6/J Chromosome 3 BAC, RP23-108E10, complete sequence Length = 211512 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 40 cttcgcttgcttcttctcttctttccttttct 71 |||| |||||||||| |||||||||||||||| Sbjct: 187632 cttctcttgcttcttatcttctttccttttct 187601
>ref|XM_949397.1| Theileria annulata strain Ankara eukaryotic translation initiation factor 3 subunit 10 (TA19545) partial mRNA Length = 3333 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 gcttcttctcttctttccttttc 70 ||||||||||||||||||||||| Sbjct: 1958 gcttcttctcttctttccttttc 1936
>gb|AC102926.14| Mus musculus chromosome 3, clone RP24-237D17, complete sequence Length = 177195 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 49 cttcttctcttctttccttttct 71 ||||||||||||||||||||||| Sbjct: 159036 cttcttctcttctttccttttct 159014
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 390 ccgccgccgctgccgtcgaggaa 412 ||||||||||||||||||||||| Sbjct: 4975773 ccgccgccgctgccgtcgaggaa 4975751
>gb|DQ088970.1|DQ088970S1 Ictalurus punctatus IGF-I gene, exons 1 and 2 Length = 2997 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 45 cttgcttcttctcttctttccttttct 71 |||||||||| |||||||||||||||| Sbjct: 1268 cttgcttcttgtcttctttccttttct 1242
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 44.1 bits (22), Expect = 0.43 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 37 ttgcttcgcttgcttcttctc-ttctttcctttt 69 ||||||| ||||||||||||| |||||||||||| Sbjct: 47532 ttgcttctcttgcttcttctctttctttcctttt 47565
>gb|AC122314.4| Mus musculus BAC clone RP23-301K1 from 12, complete sequence Length = 205285 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 cttctcttctttccttttctcgtctc 77 ||||||||||||||||||||| |||| Sbjct: 197063 cttctcttctttccttttctcttctc 197038
>gb|AC123608.7| Mus musculus chromosome 3, clone RP23-304A10, complete sequence Length = 206790 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctc 72 |||||||||||||||||||||| Sbjct: 157262 tcttctcttctttccttttctc 157283
>emb|AL645584.27| Mouse DNA sequence from clone RP23-280M7 on chromosome 1 Contains a novel gene and two CpG islands, complete sequence Length = 171382 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttctc 72 |||||||||||||||||||||| Sbjct: 46895 tcttctcttctttccttttctc 46874
>gb|AC073957.7| Homo sapiens BAC clone RP11-449P15 from 7, complete sequence Length = 196204 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 50 ttcttctcttctttccttttct 71 |||||||||||||||||||||| Sbjct: 52882 ttcttctcttctttccttttct 52861
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 attgaattgaattgattgggcagaat 146 |||||||| ||||||||||||||||| Sbjct: 12579455 attgaattaaattgattgggcagaat 12579480 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 attgaattgaattgattgggcagaat 146 |||||||| ||||||||||||||||| Sbjct: 12284254 attgaattaaattgattgggcagaat 12284279 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgagga 411 |||||||||||||||||| ||||| Sbjct: 18418755 cgccgccgccgctgccgtggagga 18418732 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 15197738 cgccgccgccgctgccgtcg 15197757 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gccgccgccgctgccgtcgaggaa 412 ||||||||||| |||||||||||| Sbjct: 3859148 gccgccgccgccgccgtcgaggaa 3859171
>gb|AC105053.3| Homo sapiens BAC clone RP11-688J22 from 2, complete sequence Length = 108768 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttctc 72 |||||||||||||||||||||| Sbjct: 66233 tcttctcttctttccttttctc 66212
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 attgaattgaattgattgggcagaat 146 |||||||| ||||||||||||||||| Sbjct: 67808 attgaattaaattgattgggcagaat 67833
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 attgaattgaattgattgggcagaat 146 |||||||| ||||||||||||||||| Sbjct: 45393 attgaattaaattgattgggcagaat 45418
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 attgaattgaattgattgggcagaat 146 |||||||| ||||||||||||||||| Sbjct: 94782 attgaattaaattgattgggcagaat 94807
>emb|BX004985.6| Mouse DNA sequence from clone RP23-320O16 on chromosome 2, complete sequence Length = 208765 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 50 ttcttctcttctttccttttct 71 |||||||||||||||||||||| Sbjct: 66308 ttcttctcttctttccttttct 66287
>gb|AC140376.3| Mus musculus BAC clone RP24-78P21 from 12, complete sequence Length = 246636 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 cttctcttctttccttttctcgtctc 77 ||||||||||||||||||||| |||| Sbjct: 46379 cttctcttctttccttttctcttctc 46354
>emb|CR848815.7| Zebrafish DNA sequence from clone CH211-197C11 in linkage group 15, complete sequence Length = 161902 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctc 72 |||||||||||||||||||||| Sbjct: 46735 tcttctcttctttccttttctc 46756
>gb|AC142105.7| Mus musculus BAC clone RP24-240E7 from chromosome 10, complete sequence Length = 163869 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttctc 72 |||||||||||||||||||||| Sbjct: 69094 tcttctcttctttccttttctc 69073
>emb|AL590418.16| Mouse DNA sequence from clone RP23-206I14 on chromosome 2, complete sequence Length = 175045 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 50 ttcttctcttctttccttttct 71 |||||||||||||||||||||| Sbjct: 2245 ttcttctcttctttccttttct 2224
>ref|NM_115533.2| Arabidopsis thaliana unknown protein AT3G56740 mRNA, complete cds Length = 1801 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcttgcttcttctcttctttc 64 ||||||||||||||||||||| Sbjct: 1588 gcttgcttcttctcttctttc 1608
>ref|NM_115534.2| Arabidopsis thaliana unknown protein AT3G56750 mRNA, complete cds Length = 1688 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcttgcttcttctcttctttc 64 ||||||||||||||||||||| Sbjct: 1448 gcttgcttcttctcttctttc 1428
>gb|AC170265.4| Mus musculus BAC RP23-54H4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210754 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cttgcttcttctcttctttcc 65 ||||||||||||||||||||| Sbjct: 67947 cttgcttcttctcttctttcc 67967
>ref|XM_514926.1| PREDICTED: Pan troglodytes similar to cystathionine beta-synthase minor isoform (LOC458588), mRNA Length = 4683 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 28 cgccgccgccgctgccgtcga 8
>ref|XM_479471.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1425 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgaggaa 412 |||||||||||| |||||||||||| Sbjct: 487 cgccgccgccgccgccgtcgaggaa 463
>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224115 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 42780 tcttctcttctttccttttct 42800
>gb|AC123744.8| Mus musculus chromosome 7, clone RP24-120F8, complete sequence Length = 160977 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 121826 tcttctcttctttccttttct 121806
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence Length = 132292 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 21418 cgccgccgccgctgccgtcga 21398
>gb|AC022453.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-253G12, complete sequence Length = 199642 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 126820 tcttctcttctttccttttct 126800
>gb|BC067064.1| Mus musculus dopachrome tautomerase, mRNA (cDNA clone MGC:91377 IMAGE:30537997), complete cds Length = 2113 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 173 tcttctcttctttccttttct 153
>ref|NM_010024.1| Mus musculus dopachrome tautomerase (Dct), mRNA Length = 2182 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 276 tcttctcttctttccttttct 256
>gb|AC044864.6| Mus musculus chromosome 3, clone RP23-168E14, complete sequence Length = 224119 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 ttcttctcttctttccttttc 70 ||||||||||||||||||||| Sbjct: 146428 ttcttctcttctttccttttc 146448
>gb|AC016814.14| Mus musculus chromosome 1, clone RP23-2M16, complete sequence Length = 247961 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 139687 tcttctcttctttccttttct 139667
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 gcgccgccgccgctgccgtcg 407 ||||||||||||||||||||| Sbjct: 32922043 gcgccgccgccgctgccgtcg 32922063 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 21516524 cgccgccgccgctgccgtcga 21516504
>ref|XM_979031.1| PREDICTED: Mus musculus dopachrome tautomerase (Dct), mRNA Length = 2221 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 421 tcttctcttctttccttttct 401
>gb|AC129581.7| Mus musculus chromosome 9, clone RP24-259A3, complete sequence Length = 209607 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 144135 tcttctcttctttccttttct 144115
>gb|AC139340.3| Atelerix albiventris clone LB4-108K18, complete sequence Length = 163566 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 74425 tcttctcttctttccttttct 74405
>emb|CT025610.7| Mouse DNA sequence from clone RP23-430J15 on chromosome 13, complete sequence Length = 210718 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 cttctcttctttccttttctc 72 ||||||||||||||||||||| Sbjct: 53470 cttctcttctttccttttctc 53450
>gb|AC133080.3| Mus musculus BAC clone RP24-280M20 from chromosome 12, complete sequence Length = 159903 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 gccattgaattgaattgattg 138 ||||||||||||||||||||| Sbjct: 47072 gccattgaattgaattgattg 47052
>gb|AC116051.4| Mus musculus BAC clone RP23-4L11 from 3, complete sequence Length = 224674 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 ttcttctcttctttccttttc 70 ||||||||||||||||||||| Sbjct: 203561 ttcttctcttctttccttttc 203581
>gb|AC159503.10| Mus musculus 10 BAC RP24-293I2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199258 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 79126 tcttctcttctttccttttct 79146
>gb|BC032521.2| Homo sapiens U2 small nuclear RNA auxiliary factor 1, mRNA (cDNA clone IMAGE:5498733), containing frame-shift errors Length = 4710 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 76 cgccgccgccgctgccgtcga 56
>gb|BC005915.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1, transcript variant c, mRNA (cDNA clone MGC:14511 IMAGE:4295037), complete cds Length = 995 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 22 cgccgccgccgctgccgtcga 2
>emb|AL590664.8| Human DNA sequence from clone RP11-66C24 on chromosome 9, complete sequence Length = 68217 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tgcttcttctcttctttcctt 67 ||||||||||||||||||||| Sbjct: 9141 tgcttcttctcttctttcctt 9121
>ref|NM_001025203.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1 (U2AF1), transcript variant b, mRNA Length = 971 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 76 cgccgccgccgctgccgtcga 56
>ref|NM_006758.2| Homo sapiens U2 small nuclear RNA auxiliary factor 1 (U2AF1), transcript variant a, mRNA Length = 971 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 76 cgccgccgccgctgccgtcga 56
>ref|NM_001025204.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1 (U2AF1), transcript variant c, mRNA Length = 1038 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 76 cgccgccgccgctgccgtcga 56
>emb|AL356100.8| Human DNA sequence from clone RP11-359H22 on chromosome 10 Contains part of a novel gene (KIAA0534), complete sequence Length = 190361 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 tgcttcttctcttctttccttttct 71 ||||||||||||||| ||||||||| Sbjct: 88773 tgcttcttctcttctctccttttct 88749
>gb|DQ352940.1| Atta sp. CSM-2006 abdominal-A (AbdA) gene, partial cds Length = 648 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 390 cgccgccgccgctgccgtcga 410
>emb|AL158829.14| Human DNA sequence from clone RP11-406O23 on chromosome 9 Contains part of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor protein 2 (paralemmin 2), a novel gene and a CpG island, complete sequence Length = 136723 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cttcttctcttctttccttttctcg 73 |||| |||||||||||||||||||| Sbjct: 118805 cttcatctcttctttccttttctcg 118829
>emb|AL160412.14| Human DNA sequence from clone RP5-827E24 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 111824 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 1642 tcttctcttctttccttttct 1662
>gb|BT000051.1| Arabidopsis thaliana putative protein (At3g56750) mRNA, complete cds Length = 1269 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcttgcttcttctcttctttc 64 ||||||||||||||||||||| Sbjct: 1209 gcttgcttcttctcttctttc 1189
>gb|AC165255.2| Mus musculus BAC clone RP23-239B8 from chromosome 13, complete sequence Length = 205903 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 99958 tcttctcttctttccttttct 99938
>gb|AC107394.3| Homo sapiens BAC clone RP11-617I14 from 4, complete sequence Length = 170971 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tgcttcttctcttctttcctt 67 ||||||||||||||||||||| Sbjct: 57489 tgcttcttctcttctttcctt 57509
>gb|AY678274.1| Human adenovirus type 51 E1A 13S protein (E1A) gene, complete cds Length = 1351 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 actccaactctgccacctata 104 ||||||||||||||||||||| Sbjct: 423 actccaactctgccacctata 443
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 gcgccgccgccgctgccgtcg 407 ||||||||||||||||||||| Sbjct: 68132 gcgccgccgccgctgccgtcg 68112
>emb|AL606466.12| Mouse DNA sequence from clone RP23-348N2 on chromosome 11 Contains the 5' end of the Ppp3r1 gene for protein phospatase 3 regulatory subunit B alpha isoform (calcineurin B, type I), a ribosomal protein L39 (Rpl39) pseudogene, a novel gene, the Plek gene for pleckstrin, a CUB domain and EGF-like repeat containing (Cegf) protein pseudogene and a CpG island, complete sequence Length = 201805 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 18677 tcttctcttctttccttttct 18657
>emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BAC clone T8M16 Length = 107271 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcttgcttcttctcttctttc 64 ||||||||||||||||||||| Sbjct: 34252 gcttgcttcttctcttctttc 34272
>emb|AL390218.1|NCB7N4 Neurospora crassa DNA linkage group II BAC clone B7N4 Length = 41750 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 21199 cgccgccgccgctgccgtcga 21179
>emb|AJ627978.1| Homo sapiens mRNA for U2 snRNP auxiliary factor small subunit (U2AF1 gene), splice variant b Length = 813 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 22 cgccgccgccgctgccgtcga 2
>gb|AC159821.2| Mus musculus BAC clone RP23-152A3 from chromosome 9, complete sequence Length = 221672 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 ttcttctcttctttccttttc 70 ||||||||||||||||||||| Sbjct: 180311 ttcttctcttctttccttttc 180331
>emb|AL606661.23| Mouse DNA sequence from clone RP23-355P23 on chromosome 11 Contains a ubiquitin C (Ubc) pseudogene, complete sequence Length = 91585 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 87555 tcttctcttctttccttttct 87535
>gb|AC116733.19| Mus musculus chromosome 3, clone RP23-349K2, complete sequence Length = 209244 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 149950 tcttctcttctttccttttct 149930
>gb|AC158355.2| Mus musculus BAC clone RP24-374N16 from chromosome 9, complete sequence Length = 172612 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 gcttcttctcttctttccttt 68 ||||||||||||||||||||| Sbjct: 137501 gcttcttctcttctttccttt 137521
>emb|AL832665.1|HSM803975 Homo sapiens mRNA; cDNA DKFZp313J1712 (from clone DKFZp313J1712) Length = 3971 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 22 cgccgccgccgctgccgtcga 2
>emb|CR606196.1| full-length cDNA clone CS0DB008YM01 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 840 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 21 cgccgccgccgctgccgtcga 1
>gb|AY094482.1| Arabidopsis thaliana AT3g56750/T8M16_80 mRNA, complete cds Length = 1643 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcttgcttcttctcttctttc 64 ||||||||||||||||||||| Sbjct: 1448 gcttgcttcttctcttctttc 1428
>gb|AC091135.9| Homo sapiens chromosome 18, clone RP11-289E15, complete sequence Length = 166207 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 113415 tcttctcttctttccttttct 113435
>gb|AY059818.1| Arabidopsis thaliana putative protein (At3g56750; T8M16_80) mRNA, complete cds Length = 1672 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcttgcttcttctcttctttc 64 ||||||||||||||||||||| Sbjct: 1431 gcttgcttcttctcttctttc 1411
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 2047126 tcttctcttctttccttttct 2047106
>gb|AC016602.7| Homo sapiens chromosome 5 clone CTD-2061O12, complete sequence Length = 186265 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 tcttctttccttttctcgtct 76 ||||||||||||||||||||| Sbjct: 164182 tcttctttccttttctcgtct 164202
>dbj|AK033040.1| Mus musculus adult male eyeball cDNA, RIKEN full-length enriched library, clone:7530403G23 product:dopachrome tautomerase, full insert sequence Length = 1869 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 338 tcttctcttctttccttttct 318
>gb|AC158518.2| Mus musculus BAC clone RP24-86K19 from chromosome 9, complete sequence Length = 203656 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 166829 tcttctcttctttccttttct 166849
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcgaggaa 412 |||||||||||| |||||||||||| Sbjct: 28387391 cgccgccgccgccgccgtcgaggaa 28387415 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 27794164 cgccgccgccgctgccgtcg 27794145 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tagcgccgccgccgctgccg 404 |||||||||||||||||||| Sbjct: 21536287 tagcgccgccgccgctgccg 21536306 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccgccgccgctgccgtcgag 409 |||||||||||||||||||| Sbjct: 5065101 ccgccgccgctgccgtcgag 5065082
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 387 gcgccgccgccgctgccgtcgagga 411 |||||||||||||||||| |||||| Sbjct: 9048151 gcgccgccgccgctgccggcgagga 9048127 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccgccgccgctgccgtcgag 409 |||||||||||||||||||| Sbjct: 20378592 ccgccgccgctgccgtcgag 20378573
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 gcgccgccgccgctgccgtcg 407 ||||||||||||||||||||| Sbjct: 33012553 gcgccgccgccgctgccgtcg 33012573 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 21509553 cgccgccgccgctgccgtcga 21509533
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 gcgccgccgccgctgccgtcg 407 ||||||||||||||||||||| Sbjct: 3930267 gcgccgccgccgctgccgtcg 3930287 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgaggaaccggagaa 420 |||||||||||| |||| |||||| |||||||| Sbjct: 386613 cgccgccgccgccgccgccgaggacccggagaa 386581 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 28846128 cgccgccgccgctgccgtcg 28846109 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 28837017 cgccgccgccgctgccgtcg 28837036 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 gcgccgccgccgctgccgtcgagg 410 |||||||||||||||||| ||||| Sbjct: 26784496 gcgccgccgccgctgccgccgagg 26784473 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 22289343 cgccgccgccgctgccgtcg 22289324
>gb|AC025754.4|AC025754 Homo sapiens chromosome 5 clone CTD-2024P10, complete sequence Length = 157365 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 tcttctttccttttctcgtct 76 ||||||||||||||||||||| Sbjct: 88208 tcttctttccttttctcgtct 88188
>gb|AC083816.21|AC083816 Mus musculus X BAC RP23-330G24 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 187691 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 80402 tcttctcttctttccttttct 80422
>emb|AL592214.14| Mouse DNA sequence from clone RP23-212I24 on chromosome 1, complete sequence Length = 194720 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 tcttctttccttttctcgtctctat 80 |||| |||||||||||||||||||| Sbjct: 97008 tcttttttccttttctcgtctctat 96984
>emb|BX823487.1|CNS0A7QL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS43ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1611 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcttgcttcttctcttctttc 64 ||||||||||||||||||||| Sbjct: 1428 gcttgcttcttctcttctttc 1408
>emb|BX824268.1|CNS0A7BI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1603 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcttgcttcttctcttctttc 64 ||||||||||||||||||||| Sbjct: 1425 gcttgcttcttctcttctttc 1405
>emb|BX823306.1|CNS0A6J5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1528 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcttgcttcttctcttctttc 64 ||||||||||||||||||||| Sbjct: 1417 gcttgcttcttctcttctttc 1397
>gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193116 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 cttgcttcttctcttctttcc 65 ||||||||||||||||||||| Sbjct: 38875 cttgcttcttctcttctttcc 38855
>gb|AC120396.6| Mus musculus chromosome 1, clone RP24-331B5, complete sequence Length = 194086 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 192973 tcttctcttctttccttttct 192993
>gb|AF550673.1| Atta sexdens abdominal-A protein (abd-A) gene, exon 1 and partial cds Length = 536 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 297 cgccgccgccgctgccgtcga 317
>gb|AC142168.3| Mus musculus BAC clone RP24-80B23 from chromosome 9, complete sequence Length = 173152 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 ttcttctcttctttccttttc 70 ||||||||||||||||||||| Sbjct: 96634 ttcttctcttctttccttttc 96654
>dbj|AK211809.1| Mus musculus cDNA, clone:Y2G0122P04, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|AK207181.1| Mus musculus cDNA, clone:Y2G0107D04, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|AK203923.1| Mus musculus cDNA, clone:Y1G0146L01, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|AK201471.1| Mus musculus cDNA, clone:Y1G0138F22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|AK194801.1| Mus musculus cDNA, clone:Y1G0116H16, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|AK194075.1| Mus musculus cDNA, clone:Y1G0114D18, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 261 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|AK192280.1| Mus musculus cDNA, clone:Y1G0108G15, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|AK191654.1| Mus musculus cDNA, clone:Y1G0106I20, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 191 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|AK190778.1| Mus musculus cDNA, clone:Y1G0103M10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|AK190705.1| Mus musculus cDNA, clone:Y1G0103I23, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|AK177641.1| Mus musculus cDNA, clone:Y0G0103I15, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022725, based on BLAT search Length = 190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 86 tcttctcttctttccttttct 66
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 387 gcgccgccgccgctgccgtcgagga 411 ||||||||| ||||||||||||||| Sbjct: 5226456 gcgccgccggcgctgccgtcgagga 5226432
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgaggaaccggagaa 420 |||||||||||| |||| |||||| |||||||| Sbjct: 115397 cgccgccgccgccgccgccgaggacccggagaa 115365
>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0084K06 Length = 177895 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 387 gcgccgccgccgctgccgtcgagga 411 |||||||||||||||||| |||||| Sbjct: 95469 gcgccgccgccgctgccggcgagga 95445
>gb|AC153911.5| Mus musculus 10 BAC RP23-182J19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219859 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 186652 tcttctcttctttccttttct 186632
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcgaggaa 412 |||||||||||| |||||||||||| Sbjct: 112954 cgccgccgccgccgccgtcgaggaa 112978
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 gcgccgccgccgctgccgtcg 407 ||||||||||||||||||||| Sbjct: 128738 gcgccgccgccgctgccgtcg 128758
>dbj|BS000233.1| Pan troglodytes chromosome 22 clone:CH251-445J22, map 22, complete sequences Length = 163962 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 72617 cgccgccgccgctgccgtcga 72637
>emb|AJ132828.1|SSI132828 Spermatozopsis similis mRNA for p210 protein, partial Length = 2028 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 gcgccgccgccgctgccgtcg 407 ||||||||||||||||||||| Sbjct: 13 gcgccgccgccgctgccgtcg 33
>dbj|AK107830.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-G11, full insert sequence Length = 949 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcgaggaaccggagaa 420 |||||||||||| |||| |||||| |||||||| Sbjct: 334 cgccgccgccgccgccgccgaggacccggagaa 366
>dbj|AK060732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A05, full insert sequence Length = 1705 Score = 42.1 bits (21), Expect = 1.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 356 ttctgctccgtccggcgcttcgcaggagatagcgccgccgccgctgccgtcgaggaaccg 415 ||||||||||||||||| ||| | || | ||| ||||||||| ||||||||||| || Sbjct: 285 ttctgctccgtccggcgtttcaccggggggagcaacgccgccgccgccgtcgaggaggcg 344 Query: 416 gagaa 420 ||||| Sbjct: 345 gagaa 349
>emb|CT025675.12| Mouse DNA sequence from clone RP24-289M11 on chromosome 14, complete sequence Length = 147656 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 58787 tcttctcttctttccttttct 58767
>gb|AC153562.2| Mus musculus 10 BAC RP23-143D12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 212486 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 58347 tcttctcttctttccttttct 58327
>dbj|AP001748.1| Homo sapiens genomic DNA, chromosome 21q, section 92/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 263361 cgccgccgccgctgccgtcga 263381
>gb|AC108833.9| Mus musculus chromosome 14, clone RP23-263F4, complete sequence Length = 171398 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 122552 tcttctcttctttccttttct 122532
>gb|U41084.1| Enterococcus faecalis ORF1 gene, partial cds; and ORF2, ORF3, ORFX, OppB (oppB), OppC (oppC), OppD (oppD), and OppF (oppF) genes, complete cds Length = 8796 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 tgcttcgcttgcttcttctct 58 ||||||||||||||||||||| Sbjct: 7770 tgcttcgcttgcttcttctct 7750
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tgcttcgcttgcttcttctct 58 ||||||||||||||||||||| Sbjct: 1978259 tgcttcgcttgcttcttctct 1978279
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 tcttctttccttttctcgtct 76 ||||||||||||||||||||| Sbjct: 1405833 tcttctttccttttctcgtct 1405853 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 tcttctttccttttctcgtct 76 ||||||||||||||||||||| Sbjct: 228127 tcttctttccttttctcgtct 228107
>gb|AC155729.3| Mus musculus 6 BAC RP24-173B18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198782 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 184138 tcttctcttctttccttttct 184158
>emb|AL929059.5| Mouse DNA sequence from clone RP23-437L13 on chromosome 2, complete sequence Length = 107108 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 53365 tcttctcttctttccttttct 53345
>emb|AL845164.5| Mouse DNA sequence from clone RP23-286G12 on chromosome 2, complete sequence Length = 115921 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 83227 tcttctcttctttccttttct 83247
>emb|X85126.1|MMTYRP2X1 M.musculus Tyrp2 gene Length = 4173 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 3574 tcttctcttctttccttttct 3554
>emb|X63349.1|MMTYRP2 M.musculus tyrp2 mRNA for tyrosinase-related protein-2 Length = 2182 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 276 tcttctcttctttccttttct 256
>emb|AL662911.21| Mouse DNA sequence from clone RP23-110F21 on chromosome 4, complete sequence Length = 165515 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 8703 tcttctcttctttccttttct 8683
>emb|AL671923.15| Mouse DNA sequence from clone RP23-322C16 on chromosome X, complete sequence Length = 213730 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttct 71 ||||||||||||||||||||| Sbjct: 202220 tcttctcttctttccttttct 202200
>gb|M96982.1|HUMSNRNPAF Homo sapiens U2 snRNP auxiliary factor small subunit, complete cds Length = 904 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 30 cgccgccgccgctgccgtcga 10
>dbj|AP002085.1| Homo sapiens genomic DNA, chromosome 21, BAC clone:KB274G10, MX1-D21S171 region, complete sequence Length = 97015 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 88870 cgccgccgccgctgccgtcga 88890
>dbj|AP001631.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2007G4, MX1-D21S171 region, complete sequence Length = 148179 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcga 408 ||||||||||||||||||||| Sbjct: 67648 cgccgccgccgctgccgtcga 67668
>dbj|AP005240.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-14P20, complete sequence Length = 98739 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ttcttctcttctttccttttc 70 ||||||||||||||||||||| Sbjct: 28301 ttcttctcttctttccttttc 28281
>gb|AC101722.14| Mus musculus chromosome 5, clone RP23-310L24, complete sequence Length = 172370 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttctcttctttccttttctc 72 |||||||||||||||||||| Sbjct: 112036 ttctcttctttccttttctc 112017
>ref|XM_550410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 742 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 598 cgccgccgccgctgccgtcg 579
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 13891 cgccgccgccgctgccgtcg 13910
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tagcgccgccgccgctgccg 404 |||||||||||||||||||| Sbjct: 544107 tagcgccgccgccgctgccg 544126
>ref|XM_467324.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2024 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 1334 cgccgccgccgctgccgtcg 1353
>ref|XM_467320.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2095 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 171 cgccgccgccgctgccgtcg 152
>ref|XM_467161.1| Oryza sativa (japonica cultivar-group), mRNA Length = 741 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 gcgccgccgccgctgccgtcgagg 410 |||||||||||||||||| ||||| Sbjct: 241 gcgccgccgccgctgccgccgagg 264
>ref|NM_196934.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0006L06.16), mRNA Length = 2823 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 2560 cgccgccgccgctgccgtcg 2541
>ref|NM_193893.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1059 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tagcgccgccgccgctgccg 404 |||||||||||||||||||| Sbjct: 840 tagcgccgccgccgctgccg 821
>ref|NM_189327.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2355 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgagga 411 |||||||||||||||||| ||||| Sbjct: 1276 cgccgccgccgctgccgtggagga 1253
>ref|NM_186012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 12 cgccgccgccgctgccgtcg 31
>ref|XM_478632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 823 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tagcgccgccgccgctgccg 404 |||||||||||||||||||| Sbjct: 48 tagcgccgccgccgctgccg 67
>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03, complete sequence Length = 146278 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 107684 cgccgccgccgctgccgtcg 107665
>gb|AF146793.2| Mus musculus Neuromedin U precursor (Nmu) gene, partial cds; PDCL2 (Pdcl2) gene, partial cds; CLOCK (Clock) gene, complete cds; TPARDL (Tpardl) gene, complete cds; and SRD5A2L (Srd5a2l) gene, complete cds Length = 204618 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ttcttctcttctttcctttt 69 |||||||||||||||||||| Sbjct: 37738 ttcttctcttctttcctttt 37719
>gb|AY184048.1| Drosophila melanogaster clone TTCTC41 centromeric satellite sequence Length = 103 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 62 tcttctcttcttttcttttctcttctct 89
>gb|AY022795.1| Oryza sativa microsatellite MRG5120 containing (CGC)X8, closest to marker S1778, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 113 cgccgccgccgctgccgtcg 132
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttc 70 |||||||||||||||||||| Sbjct: 481660 tcttctcttctttccttttc 481679
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 74865 cgccgccgccgctgccgtcg 74846
>gb|AC087325.9| Trypanosoma brucei chromosome 4 clone RPCI93-29M18, complete sequence Length = 123258 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttc 70 |||||||||||||||||||| Sbjct: 33906 tcttctcttctttccttttc 33925
>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02, complete sequence Length = 75456 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 55473 cgccgccgccgctgccgtcg 55492
>gb|AC091732.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0091O09, complete sequence Length = 123427 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tagcgccgccgccgctgccg 404 |||||||||||||||||||| Sbjct: 73989 tagcgccgccgccgctgccg 74008
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 151152 cgccgccgccgctgccgtcg 151133
>gb|AY591906.1| Gallus gallus SP8 mRNA, complete cds Length = 2864 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgagga 411 ||||||||||||||||| |||||| Sbjct: 222 cgccgccgccgctgccgccgagga 199
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 128034 cgccgccgccgctgccgtcg 128053
>gb|AC147239.2| Mus musculus BAC clone RP23-386C10 from chromosome 5, complete sequence Length = 217470 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ttcttctcttctttcctttt 69 |||||||||||||||||||| Sbjct: 29150 ttcttctcttctttcctttt 29131
>ref|XM_952044.1| Neurospora crassa OR74A hypothetical protein (NCU06497.1) partial mRNA Length = 1467 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgagga 411 |||||||||||| ||||||||||| Sbjct: 648 cgccgccgccgccgccgtcgagga 625
>ref|XM_326351.1| Neurospora crassa OR74A hypothetical protein (NCU06497.1) partial mRNA Length = 1467 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgagga 411 |||||||||||| ||||||||||| Sbjct: 648 cgccgccgccgccgccgtcgagga 625
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 93705 cgccgccgccgctgccgtcg 93724
>gb|AC158968.3| Mus musculus chromosome 1, clone RP23-411D16, complete sequence Length = 183663 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctcgtctct 78 |||||||||||||||| ||||| ||||| Sbjct: 169663 tcttctcttctttcctcttctcttctct 169690
>gb|AC102622.7| Mus musculus chromosome 3, clone RP23-434O10, complete sequence Length = 237899 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 115267 tcttctcttcttttcttttctcttctct 115240
>gb|AC116413.12| Mus musculus chromosome 8, clone RP24-84J11, complete sequence Length = 210471 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cttctcttctttccttttct 71 |||||||||||||||||||| Sbjct: 65282 cttctcttctttccttttct 65263
>gb|AY536943.1| Uncultured bacterium clone mdt15c03 16S ribosomal RNA gene, partial sequence Length = 688 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctataaattccagccaccgc 119 |||||||||||||||||||| Sbjct: 611 ctataaattccagccaccgc 592
>gb|AC167250.2| Mus musculus BAC clone RP23-69D2 from chromosome 9, complete sequence Length = 221255 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 tctttccttttctcgtctctatcc 82 |||||||||||||| ||||||||| Sbjct: 20000 tctttccttttctcttctctatcc 19977
>gb|AF130342.2| Homo sapiens chromosome 8, complete sequence Length = 349992 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cttcttctcttctttccttttctc 72 ||||||||||| |||||||||||| Sbjct: 254735 cttcttctcttgtttccttttctc 254712
>gb|AC117630.11| Mus musculus chromosome 9, clone RP23-181A16, complete sequence Length = 245165 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 155300 tcttctcttcttttcttttctcttctct 155273
>gb|AC124468.3| Mus musculus BAC clone RP24-165F16 from chromosome 5, complete sequence Length = 169280 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ttcttctcttctttcctttt 69 |||||||||||||||||||| Sbjct: 60765 ttcttctcttctttcctttt 60746
>gb|AC144401.2| Didelphis virginiana clone LBNL3-270H19, complete sequence Length = 180378 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cttcttctcttctttccttttctc 72 ||||||||||||||||||| |||| Sbjct: 102263 cttcttctcttctttccttctctc 102240
>gb|AC118009.7| Mus musculus chromosome 8, clone RP23-442H2, complete sequence Length = 208458 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttctcttctttccttttctc 72 |||||||||||||||||||| Sbjct: 49911 ttctcttctttccttttctc 49930
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gccgtggtccttgagctcgt 308 |||||||||||||||||||| Sbjct: 626851 gccgtggtccttgagctcgt 626870
>ref|XM_532252.2| PREDICTED: Canis familiaris similar to Translocation protein SEC63 homolog (LOC475016), mRNA Length = 2801 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 94 cgccgccgccgctgccgtcg 75
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 293 tggtccttgagctcgtcgacagtcccgg 320 |||| |||||| |||||||||||||||| Sbjct: 234044 tggttcttgaggtcgtcgacagtcccgg 234071
>gb|AC124350.4| Mus musculus BAC clone RP24-466K21 from chromosome 8, complete sequence Length = 160905 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cttctcttctttccttttct 71 |||||||||||||||||||| Sbjct: 148873 cttctcttctttccttttct 148854
>gb|AC115300.4| Mus musculus BAC clone RP24-74P1 from chromosome 10, complete sequence Length = 199750 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||| |||||||||| ||||| Sbjct: 198039 tcttctcttctctccttttctcttctct 198066
>gb|AC121927.2| Mus musculus BAC clone RP24-202N20 from 10, complete sequence Length = 164073 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||| |||||||||| ||||| Sbjct: 15146 tcttctcttctctccttttctcttctct 15173
>gb|AC117211.3| Mus musculus BAC clone RP23-287M3 from 3, complete sequence Length = 206579 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 106348 tcttctcttcttttcttttctcttctct 106375
>gb|AC116123.7| Mus musculus chromosome 6, clone RP23-87I4, complete sequence Length = 205411 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 65720 tcttctcttcttttcttttctcttctct 65747
>gb|BC001923.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1, transcript variant a, mRNA (cDNA clone MGC:3916 IMAGE:2823296), complete cds Length = 920 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 20 cgccgccgccgctgccgtcg 1
>gb|BC001177.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1, transcript variant a, mRNA (cDNA clone MGC:2223 IMAGE:3534272), complete cds Length = 920 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 20 cgccgccgccgctgccgtcg 1
>emb|AL592423.8| Human DNA sequence from clone RP11-1A24 on chromosome 6 Contains part of the GRM1 gene for metabotropic glutamate receptor 1 and a novel pseudogene, complete sequence Length = 53728 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 ttgcttcttctcttctttcctttt 69 ||||||||||| |||||||||||| Sbjct: 33618 ttgcttcttctattctttcctttt 33595
>ref|XM_784848.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier family 30 (zinc transporter), member 9 (LOC585004), mRNA Length = 870 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 ctcccagtatacagtaggac 476 |||||||||||||||||||| Sbjct: 325 ctcccagtatacagtaggac 306
>emb|AL356108.12| Human DNA sequence from clone RP11-149J18 on chromosome 1 Contains part of a novel gene and a glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 (QRSL1) pseudogene, complete sequence Length = 162347 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cttctcttctttccttttct 71 |||||||||||||||||||| Sbjct: 7745 cttctcttctttccttttct 7764
>gb|DQ352947.1| Centromyrmex feae voucher RA0263 abdominal-A (AbdA) gene, partial cds Length = 645 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 gccgccgccgctgccgtcga 408 |||||||||||||||||||| Sbjct: 388 gccgccgccgctgccgtcga 407
>ref|XM_784931.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier family 30 (zinc transporter), member 9 (LOC585091), partial mRNA Length = 418 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 ctcccagtatacagtaggac 476 |||||||||||||||||||| Sbjct: 325 ctcccagtatacagtaggac 306
>gb|AY338490.1| Homo sapiens glutathione reductase (GSR) gene, complete cds Length = 50564 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttc 70 |||||||||||||||||||| Sbjct: 39801 tcttctcttctttccttttc 39820
>ref|XM_962817.1| PREDICTED: Tribolium castaneum similar to 60S acidic ribosomal protein P2 (Acidic ribosomal protein RPA1) (LOC656276), mRNA Length = 430 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cttgcttcttctcttctttc 64 |||||||||||||||||||| Sbjct: 327 cttgcttcttctcttctttc 308
>emb|BX006273.1|CNS08D05 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA10CF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 163 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 64 cgccgccgccgctgccgtcg 45
>gb|AC154110.3| Ornithorhynchus anatinus BAC clone OABb-462P24 from chromosome unknown, complete sequence Length = 169179 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctcgtctct 78 |||||| ||||||||||||||| ||||| Sbjct: 107107 tcttcttttctttccttttctcttctct 107134
>emb|AL596382.12| Mouse DNA sequence from clone RP23-337J7 on chromosome 11, complete sequence Length = 225083 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ttcttctcttctttcctttt 69 |||||||||||||||||||| Sbjct: 157840 ttcttctcttctttcctttt 157821
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 97068 cgccgccgccgctgccgtcg 97087
>emb|AL669819.13| Mouse DNA sequence from clone RP23-9O13 on chromosome 13 Contains the V1rh16 gene for vomeronasal 1 receptor H16, the gene for a novel vomeronasal 1 receptor I (V1ri) family member, a histocompatibility 2 class II antigen E beta (H2-Eb1) pseudogene, a vomeronasal 1 receptor I (V1ri) family pseudogene, four novel genes, a pseudogene similar to part of cytochrome c oxidase, subunit 2 (Cox2), a ribosomal protein L39 (Rpl39) pseudogene and two CpG islands, complete sequence Length = 173769 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 tctttccttttctcgtctctatcc 82 |||||||||||||| ||||||||| Sbjct: 32863 tctttccttttctcttctctatcc 32840
>emb|AL589737.11| Mouse DNA sequence from clone RP23-43L14 on chromosome 13, complete sequence Length = 202855 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 57500 tcttctcttcttttcttttctcttctct 57527
>gb|AC154500.2| Mus musculus BAC clone RP23-207P3 from chromosome 17, complete sequence Length = 203007 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cttcttctcttctttccttt 68 |||||||||||||||||||| Sbjct: 115035 cttcttctcttctttccttt 115016
>gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosome 12, complete sequence Length = 187225 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttc 70 |||||||||||||||||||| Sbjct: 81320 tcttctcttctttccttttc 81301
>gb|AC103801.2| Homo sapiens chromosome 11, clone RP11-765I16, complete sequence Length = 174545 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttctcttctttccttttctc 72 |||||||||||||||||||| Sbjct: 16404 ttctcttctttccttttctc 16385
>gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; lozenge (lz) and c12.1 genes, complete cds; and c12.2 gene, partial cds Length = 45142 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 18172 cgccgccgccgctgccgtcg 18153
>gb|AC090174.9| Homo sapiens chromosome 11, clone RP11-690A7, complete sequence Length = 52525 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttctcttctttccttttctc 72 |||||||||||||||||||| Sbjct: 43027 ttctcttctttccttttctc 43046
>gb|AC084823.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-290L7, Complete Sequence, complete sequence Length = 212133 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ttcttctcttctttcctttt 69 |||||||||||||||||||| Sbjct: 157927 ttcttctcttctttcctttt 157946
>gb|AY119159.1| Drosophila melanogaster RH08414 full insert cDNA Length = 1989 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 1794 tcttctcttcttttcttttctcttctct 1767
>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184334 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 77323 cgccgccgccgctgccgtcg 77342
>gb|AE005747.1| Caulobacter crescentus CB15 section 73 of 359 of the complete genome Length = 11070 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ccgtggtccttgagctcgtcgaca 313 |||||||||||||| ||||||||| Sbjct: 3335 ccgtggtccttgagatcgtcgaca 3358
>gb|AY118394.1| Drosophila melanogaster RE52162 full insert cDNA Length = 4400 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 330 cgccgccgccgctgccgtcg 311
>gb|AC105306.13| Bos taurus clone rp42-158g13, complete sequence Length = 196377 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 ccttttctcgtctctatccaactc 87 ||||||||| |||||||||||||| Sbjct: 169254 ccttttctcctctctatccaactc 169277
>gb|AC023682.4| Drosophila melanogaster X BAC RP98-7F10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179236 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 124398 tcttctcttcttttcttttctcttctct 124371
>gb|AC010483.7| Homo sapiens chromosome 5 clone CTD-2321L15, complete sequence Length = 93951 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttctcttctttccttttctc 72 |||||||||||||||||||| Sbjct: 84181 ttctcttctttccttttctc 84200
>gb|AC116013.3| Homo sapiens chromosome 11, clone RP11-25D20, complete sequence Length = 149045 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttctcttctttccttttctc 72 |||||||||||||||||||| Sbjct: 27183 ttctcttctttccttttctc 27202
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cttcttctcttctttccttt 68 |||||||||||||||||||| Sbjct: 3185130 cttcttctcttctttccttt 3185149
>ref|NM_164996.1| Drosophila melanogaster CG31760-RA (CG31760), mRNA Length = 4335 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 330 cgccgccgccgctgccgtcg 311
>ref|NM_078544.2| Drosophila melanogaster lozenge CG1689-RA (lz), mRNA Length = 3469 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 1587 cgccgccgccgctgccgtcg 1568
>ref|NM_078499.3| Drosophila melanogaster Tetraspanin 5D CG4690-RA (Tsp5D), mRNA Length = 1981 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 1796 tcttctcttcttttcttttctcttctct 1769
>gb|AC087310.9| Homo sapiens 12p BAC RP11-681I19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109567 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 gcttcttctcttctttccttttct 71 |||||||||||||| ||||||||| Sbjct: 27471 gcttcttctcttctctccttttct 27494
>dbj|AK135373.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820408F24 product:hypothetical protein, full insert sequence Length = 3302 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gcttgcttcttctcttctttcctt 67 |||||||||||| ||||||||||| Sbjct: 479 gcttgcttcttcacttctttcctt 502
>dbj|AK141468.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530029C21 product:unclassifiable, full insert sequence Length = 4362 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||| | |||||||||||||| Sbjct: 1972 tcttctcttctcttcttttctcgtctct 1999
>gb|AC009314.4| Homo sapiens BAC clone RP11-465K4 from 8, complete sequence Length = 161788 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttc 70 |||||||||||||||||||| Sbjct: 150306 tcttctcttctttccttttc 150325
>gb|AC140227.7| Mus musculus BAC clone RP24-487N2 from chromosome 8, complete sequence Length = 188262 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cttctcttctttccttttct 71 |||||||||||||||||||| Sbjct: 144717 cttctcttctttccttttct 144698
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 gtcgctggcgagctgcgcggtcgt 280 |||||||||| ||||||||||||| Sbjct: 3055129 gtcgctggcgtgctgcgcggtcgt 3055152
>dbj|AK156349.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830017I21 product:unclassifiable, full insert sequence Length = 4186 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ttcttctcttctttcctttt 69 |||||||||||||||||||| Sbjct: 531 ttcttctcttctttcctttt 512
>gb|AC162947.2| Mus musculus BAC clone RP23-12D16 from chromosome 8, complete sequence Length = 230889 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttctcgtctct 78 |||||||||||||||| ||||| ||||| Sbjct: 217913 tcttctcttctttcctcttctcttctct 217886
>emb|AL929441.37| Mouse DNA sequence from clone RP23-418E20 on chromosome 4, complete sequence Length = 202920 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cttcttctcttctttccttt 68 |||||||||||||||||||| Sbjct: 57727 cttcttctcttctttccttt 57746
>tpg|BK000364.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M84, complete sequence Length = 19009 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tagcgccgccgccgctgccg 404 |||||||||||||||||||| Sbjct: 7156 tagcgccgccgccgctgccg 7175
>gb|AC158630.5| Mus musculus 10 BAC RP23-440F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191380 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 tctttccttttctcgtctctatcc 82 |||||||||||||| ||||||||| Sbjct: 59484 tctttccttttctcttctctatcc 59507
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 18392669 cgccgccgccgctgccgtcg 18392688 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 4293355 cgccgccgccgctgccgtcg 4293336
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 16752551 cgccgccgccgctgccgtcg 16752570 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tagcgccgccgccgctgccg 404 |||||||||||||||||||| Sbjct: 12017011 tagcgccgccgccgctgccg 12017030
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 25151050 cgccgccgccgctgccgtcg 25151069 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 14956815 cgccgccgccgctgccgtcg 14956796 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 6617419 cgccgccgccgctgccgtcg 6617438 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 5056567 cgccgccgccgctgccgtcg 5056548
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgagga 411 |||||||||||||||||| ||||| Sbjct: 42187151 cgccgccgccgctgccgtggagga 42187128 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tagcgccgccgccgctgccg 404 |||||||||||||||||||| Sbjct: 15684330 tagcgccgccgccgctgccg 15684349 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 14361505 cgccgccgccgctgccgtcg 14361486 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 4317183 cgccgccgccgctgccgtcg 4317202
>gb|AC011066.5|AC011066 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone BACR02B06, complete sequence Length = 174314 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 144492 cgccgccgccgctgccgtcg 144473
>gb|AC009198.8|AC009198 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone BACR19C12, complete sequence Length = 171134 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 2997 cgccgccgccgctgccgtcg 2978
>gb|AC010906.10| Homo sapiens BAC clone RP11-566O4 from 2, complete sequence Length = 208571 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 166653 tcttctcttcttttcttttctcttctct 166626
>gb|AC153613.9| Mus musculus 10 BAC RP23-23C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214432 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 gtacctagatagtcacgtacatat 218 |||||||||||||||| ||||||| Sbjct: 173852 gtacctagatagtcacatacatat 173875
>gb|AC010209.14| Homo sapiens 12 BAC RP11-427C3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191148 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cttcttctcttctttccttt 68 |||||||||||||||||||| Sbjct: 58955 cttcttctcttctttccttt 58974
>gb|AC009233.3|AC009233 Homo sapiens BAC clone RP11-356K22 from Y, complete sequence Length = 195439 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tcttctcttctttccttttctcgtctct 78 ||||||||||||| |||||||| ||||| Sbjct: 134629 tcttctcttcttttcttttctcttctct 134656
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgagga 411 |||||||||||||||||| ||||| Sbjct: 60349 cgccgccgccgctgccgtggagga 60326
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 390 ccgccgccgctgccgtcgaggaaccgga 417 ||||||||||||||| |||||| ||||| Sbjct: 4429739 ccgccgccgctgccggcgaggacccgga 4429766
>gb|AC026426.3|AC026426 Homo sapiens chromosome 5 clone CTD-2188O13, complete sequence Length = 68480 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttctcttctttccttttctc 72 |||||||||||||||||||| Sbjct: 63748 ttctcttctttccttttctc 63729
>gb|AC010200.8| Homo sapiens 12 BAC RP11-575G13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158149 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cttcttctcttctttccttt 68 |||||||||||||||||||| Sbjct: 13690 cttcttctcttctttccttt 13671
>gb|AC124005.13| Mus musculus chromosome 3, clone RP24-149B7, complete sequence Length = 166406 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 ctcttctttccttttctcgtctct 78 |||||||||||||||||| ||||| Sbjct: 88561 ctcttctttccttttctcctctct 88538
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 86543 cgccgccgccgctgccgtcg 86524
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 47987 cgccgccgccgctgccgtcg 47968
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgagga 411 |||||||||||||||||| ||||| Sbjct: 133491 cgccgccgccgctgccgtggagga 133468
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcgagga 411 |||||||||||||||||| ||||| Sbjct: 80629 cgccgccgccgctgccgtggagga 80606
>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0708H12 Length = 162381 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 gcgccgccgccgctgccgtcgagg 410 |||||||||||||||||| ||||| Sbjct: 146526 gcgccgccgccgctgccgccgagg 146503
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 162701 cgccgccgccgctgccgtcg 162682 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 153590 cgccgccgccgctgccgtcg 153609
>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_E07 Length = 123613 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 38820 cgccgccgccgctgccgtcg 38801 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 29709 cgccgccgccgctgccgtcg 29728
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgccgccgccgctgccgtcg 407 |||||||||||||||||||| Sbjct: 96953 cgccgccgccgctgccgtcg 96972
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tagcgccgccgccgctgccg 404 |||||||||||||||||||| Sbjct: 122227 tagcgccgccgccgctgccg 122246 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,497,973 Number of Sequences: 3902068 Number of extensions: 4497973 Number of successful extensions: 148339 Number of sequences better than 10.0: 311 Number of HSP's better than 10.0 without gapping: 331 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 142349 Number of HSP's gapped (non-prelim): 5991 length of query: 501 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 479 effective length of database: 17,147,199,772 effective search space: 8213508690788 effective search space used: 8213508690788 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)