>ABFA_STRLI (P53627) Alpha-N-arabinofuranosidase (EC 3.2.1.55) (Arabinosidase)|
           (ABF) (Alpha-L-AF)
          Length = 662

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +3

Query: 27  LSPARKSAPRSAPGEPFHGRSVSRDETQATAMRGPP 134
           ++P R+S P SAPG P   R   R  T+A A RG P
Sbjct: 624 VTPWRRSPPGSAPGTPAPTR---RRRTRAGASRGAP 656

>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2161

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 17/42 (40%), Positives = 17/42 (40%)
 Frame = +3

Query: 9   TRCPPFLSPARKSAPRSAPGEPFHGRSVSRDETQATAMRGPP 134
           T  PP L P     P   P EP H   V    TQA    GPP
Sbjct: 527 TPTPPALPPTPTPTPEKDPEEPAHAPPVQSAPTQA----GPP 564

>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +3

Query: 3   SATRCPPFLSPAR----KSAPRSAPGEPFHGRSVSRDETQATAMRGPP 134
           S  R PP  SPAR    ++ P+++P       S +R   QA+  R PP
Sbjct: 10  SPARTPPQASPARTSPARAPPQASPARTPPQASPARTPPQASPARAPP 57

>PTPRS_HUMAN (Q13332) Receptor-type tyrosine-protein phosphatase S precursor (EC|
           3.1.3.48) (R-PTP-S) (Protein-tyrosine phosphatase sigma)
           (R-PTP-sigma)
          Length = 1948

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 21  PFLSPARKSAPRSAPGEPFHGRSVSRDETQATAMRGPP 134
           P   P +    +  PG+P + R+ +R ET  T    PP
Sbjct: 511 PLSDPIQVKTQQGVPGQPMNLRAEARSETSITLSWSPP 548

>CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22|
          Length = 954

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  SPARKSAPRSAPGEPFHGRSVSRDET 107
           SP  +S PRS P      RS+SRD T
Sbjct: 817 SPGSRSRPRSRPRSRSRSRSLSRDRT 842


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,685,207
Number of Sequences: 219361
Number of extensions: 437388
Number of successful extensions: 1644
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1638
length of database: 80,573,946
effective HSP length: 53
effective length of database: 68,947,813
effective search space used: 1654747512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)