Clone Name | bastl20b04 |
---|---|
Clone Library Name | barley_pub |
>gb|AC120845.11| Mus musculus chromosome 3, clone RP23-468E4, complete sequence Length = 174129 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 216 gccactcctcccccgccccggccctc 241 |||||||||||||||||||| ||||| Sbjct: 88037 gccactcctcccccgccccgcccctc 88062
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 42.1 bits (21), Expect = 1.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 245 ctccagctctcctccggctacttctcgggcggcgggg 281 ||||||||| | ||||||||||||| |||||||||| Sbjct: 108078 ctccagctcaacaccggctacttctccggcggcgggg 108042
>emb|AL031273.1|HS726F20 Human DNA sequence from clone RP4-726F20 on chromosome 1p36.11-36.23 Contains the 5' end of a novel gene, complete sequence Length = 56959 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 cgccgcccgcctcccgcgctc 321 ||||||||||||||||||||| Sbjct: 34147 cgccgcccgcctcccgcgctc 34127
>gb|AE005953.1| Caulobacter crescentus CB15 section 279 of 359 of the complete genome Length = 11527 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 291 tcggcccggacgccgcccgcctcccgcgc 319 ||||||| |||||||||||||||| |||| Sbjct: 9469 tcggcccagacgccgcccgcctccggcgc 9497
>gb|AC149292.15| Sus scrofa clone ch242-69g11, complete sequence Length = 215342 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 ctcccccgccccggccctcgc 243 ||||||||||||||||||||| Sbjct: 104663 ctcccccgccccggccctcgc 104683
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 245 ctccagctctcctccggctacttctcgggcggcgggg 281 ||||||||| | ||||||||||||| |||||||||| Sbjct: 27511948 ctccagctcaacaccggctacttctccggcggcgggg 27511912
>gb|AY549187.1| Streptomyces albofaciens cytochrome P450 monooxygenase CYP107Z2v1 (ema8) gene, complete cds Length = 4500 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgccgcccgcctcccgcgctccttcgcg 328 ||||| ||||| |||||||||||||||| Sbjct: 3129 cgccgtccgccgcccgcgctccttcgcg 3156
>gb|AC123541.3| Oryctolagus cuniculus clone LB1-184A7, complete sequence Length = 190901 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tctcaattcccgctccccgc 75 |||||||||||||||||||| Sbjct: 91276 tctcaattcccgctccccgc 91295
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 ggcgccggccactcctcccccgcc 232 ||||||||||||||||||| |||| Sbjct: 280016 ggcgccggccactcctccctcgcc 279993
>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold Length = 1889755 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tctcaattcccgctccccgc 75 |||||||||||||||||||| Sbjct: 1790130 tctcaattcccgctccccgc 1790149
>ref|XM_575580.1| PREDICTED: Rattus norvegicus similar to MGC22014 protein (LOC500229), mRNA Length = 7317 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gctccagctctcctccggct 263 |||||||||||||||||||| Sbjct: 1210 gctccagctctcctccggct 1229
>dbj|AB158476.1| Streptomyces sp. FERM BP-5809 clac gene for cyclic lipopeptide acylase small and large subunits, complete cds Length = 5692 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tcttcggcccggacgccgcc 307 |||||||||||||||||||| Sbjct: 1231 tcttcggcccggacgccgcc 1250 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,322,258 Number of Sequences: 3902068 Number of extensions: 1322258 Number of successful extensions: 44179 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44073 Number of HSP's gapped (non-prelim): 106 length of query: 334 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 312 effective length of database: 17,147,199,772 effective search space: 5349926328864 effective search space used: 5349926328864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)