>CABP4_MOUSE (Q8VHC5) Calcium-binding protein 4 (CaBP4)|
          Length = 271

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = -2

Query: 442 RPSARGRGSTARNSAEQKLAAGGESPSRTGPDRAAQGRGPSG--KEPPESQSGDLYPCSF 269
           R +A G   T R S ++    G +  S +G   ++QG   SG  K PP ++ G   P S 
Sbjct: 24  RSAAEGPALTRRRSKKESWHPGSQKAS-SGDQSSSQGSEASGSSKHPPRTKVGQEEPSSA 82

Query: 268 PRAGGAWGXXXXXXEDPR 215
           P    +         DP+
Sbjct: 83  PARPASHRHSHRHRSDPQ 100

>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
 Frame = -2

Query: 439  PSARG-RGSTARNSAEQKLAAGGES-----PSRTGPDRAAQGRGPSGKEPPESQSGDLYP 278
            P  RG  G   R   E +  A GE      P RTGP  A   RGP G+  PE   G   P
Sbjct: 1309 PGKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGPMGA---RGPPGRVGPEGLRGIPGP 1365

Query: 277  CSFPRAGGAWG 245
               P   GA G
Sbjct: 1366 VGEPGLLGAPG 1376

>RYR1_RABIT (P11716) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5037

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 439  PSARGRGSTARNSAEQKLAAGGESPSRTGPD-RAAQGRGPSGKEPPE 302
            P+ RG G +   +A ++     E P+R GP  R  + R   G+EPPE
Sbjct: 2366 PALRGEGGSGLLAAIEEAIRISEDPARDGPGVRRDRRREHFGEEPPE 2412

>RYR1_HUMAN (P21817) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5038

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 439  PSARGRGSTARNSAEQKLAAGGESPSRTGPD-RAAQGRGPSGKEPPE 302
            P+ RG G +   +A ++     E P+R GP  R  + R   G+EPPE
Sbjct: 2366 PALRGEGGSGLLAAIEEAIRISEDPARDGPGIRRDRRREHFGEEPPE 2412

>TBX2_CANFA (Q863A2) T-box transcription factor TBX2 (T-box protein 2)|
          Length = 702

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 379 GGESPSRTGPDRAAQGRGPS-GKEPPES 299
           GG  P  T P+RA + R P  GKEP ES
Sbjct: 373 GGSPPRLTEPERARERRSPERGKEPAES 400

>SESN1_MOUSE (P58006) Sestrin-1 (p53-regulated protein PA26)|
          Length = 492

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 274 NKGKDRRFGTRVAPSPTGHGPARLDP 351
           ++G+D   G R+ P P GHGP+R  P
Sbjct: 29  DRGQDEELGIRI-PRPLGHGPSRFIP 53

>TWST1_PONPY (Q8MIB9) Twist-related protein 1|
          Length = 203

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 23/78 (29%), Positives = 28/78 (35%)
 Frame = -2

Query: 442 RPSARGRGSTARNSAEQKLAAGGESPSRTGPDRAAQGRGPSGKEPPESQSGDLYPCSFPR 263
           +P +  RG   R S+ ++ A GG      GP  AA G    G EP     G     S   
Sbjct: 28  QPPSGKRGGRKRRSSSRRSAGGG-----AGPGGAASGGVGGGDEPGSPAQGKRGKKSAGC 82

Query: 262 AGGAWGXXXXXXEDPRGS 209
            GG  G          GS
Sbjct: 83  GGGGGGGAGGGSSSGGGS 100

>PKP4_HUMAN (Q99569) Plakophilin-4 (p0071)|
          Length = 1211

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 316 SPTGHGPARLDPGRYATETRLRLRASAPLSSAPLTPCRARK 438
           SP+   P  L+P  Y++ T    RA++P S  P +P   R+
Sbjct: 247 SPSVTDPRPLNPSAYSSTTLPAARAASPYSQRPASPTAIRR 287

>PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Salivary|
           proline-rich protein) (Con1 glycoprotein) [Contains:
           Basic peptide P-F] (Fragment)
          Length = 382

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = +3

Query: 255 PPARGKEQG*RSPLWDSGGSFPDGPRPCAARSGPVRDGDSPPAAS 389
           PP  GK QG   P    GG+ P GP P     GP   GD+   +S
Sbjct: 99  PPPPGKPQG--PP--PQGGNKPQGPPPPGKPQGPPPQGDNKSRSS 139



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +3

Query: 255 PPARGKEQG*RSPLWDSGGSFPDGPRPCAARSGPVRDGDS 374
           PP  GK QG   P    GG+ P GP P     GP   GD+
Sbjct: 161 PPPPGKPQG--PP--PQGGNKPQGPPPPGKPQGPPPQGDN 196



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
 Frame = +3

Query: 255 PPARGKEQG*RSPLWDSGGSFPDGPRPCAARSGPVRDGD------SPP 380
           PP  GK QG   P    GG+ P GP P     GP   GD      SPP
Sbjct: 38  PPPPGKPQG--PP--PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPP 81

>FOXD2_HUMAN (O60548) Forkhead box protein D2 (Forkhead-related protein FKHL17)|
           (Forkhead-related transcription factor 9) (FREAC-9)
          Length = 497

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 385 AAGGESPSRTGPDRAAQGRGPSGKEPPESQS 293
           + GGE P+R+GP RA +   P G EPP  ++
Sbjct: 34  SGGGELPARSGP-RAPRDVLPHGHEPPAEEA 63

>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,|
           ankyrin repeat and pleckstrin homology domains 2)
           (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE)
          Length = 1186

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
 Frame = -2

Query: 442 RPSARGRGSTARNSAEQKLAAGGESPSRTGPDRAAQGRGPSGKEPPES------QSGDLY 281
           +P  +G  STA   A    A GG S + T       G G  GK  P         + DL+
Sbjct: 218 KPRVKGSKSTAGTGASAAAAGGGGSAAVTTSGGVGAGAGTRGKLSPRKGKSKTLDNSDLH 277

Query: 280 P 278
           P
Sbjct: 278 P 278

>CCNL1_CHICK (Q5ZJP9) Cyclin-L1|
          Length = 534

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = -2

Query: 433 ARGRGSTARNSAEQKLAAGGESPSRTGPDRAAQGRGPSGKEPPESQSGDLYPCS 272
           A G   T  NS    +  G ES SR+G    +  R PS    P+ +  + Y  S
Sbjct: 372 AEGAKRTGSNSPVNGVQKGRESRSRSGSRDQSYSRSPSRSASPKHRKSESYSTS 425

>CON8_NEUCR (P10169) Conidiation-specific protein 8|
          Length = 176

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = -2

Query: 361 RTGPDRAAQGRGPSGKEPPESQSGDLYPCS---FPRAGGA 251
           +TGPD AAQG G   +    S+S  L   S   FP   GA
Sbjct: 40  KTGPDAAAQGMGGGARGSISSESSKLIDESTKLFPNVAGA 79

>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 23/65 (35%), Positives = 27/65 (41%)
 Frame = -2

Query: 439  PSARGRGSTARNSAEQKLAAGGESPSRTGPDRAAQGRGPSGKEPPESQSGDLYPCSFPRA 260
            P A G    AR  A +    G   P  TGP  +   RGP+GK  P+  SG   P   P  
Sbjct: 859  PGANGEKG-ARGIAGKPGPRGQRGP--TGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGE 915

Query: 259  GGAWG 245
             G  G
Sbjct: 916  RGPQG 920

>PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precursor (Salivary|
           proline-rich protein) [Contains: Basic peptide IB-6;
           Peptide P-H]
          Length = 392

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
 Frame = +3

Query: 255 PPARGKEQG*RSPLWDSGGSFPDGPRPCAARSGPVRDGD------SPP 380
           PP  GK QG   P    GG+ P GP P     GP   GD      SPP
Sbjct: 234 PPPPGKPQG--PP--QQGGNRPQGPPPPGKPQGPPPQGDKSRSPQSPP 277



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 7/63 (11%)
 Frame = +3

Query: 213 PRGXXXXXXTTPHAPPAR-GKEQG*RSPLWDSGGSFPDGPRPCAARSGPVRDGD------ 371
           P+G        P  PP   GK QG   P    GG+ P GP P     GP   GD      
Sbjct: 36  PQGPSPQGGNKPQGPPPPPGKPQG--PP--PQGGNKPQGPPPPGKPQGPPPQGDKSRSPR 91

Query: 372 SPP 380
           SPP
Sbjct: 92  SPP 94



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
 Frame = +3

Query: 255 PPARGKEQG*RSPLWDSGGSFPDGPRPCAARSGPVRDGD------SPP 380
           PP  GK QG   P    GG+ P GP P     GP   GD      SPP
Sbjct: 173 PPPPGKPQG--PP--PQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPP 216



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
 Frame = +3

Query: 255 PPARGKEQG*RSPLWDSGGSFPDGPRPCAARSGPVRDGD------SPP 380
           PP  GK QG   P    GG+ P GP P     GP   GD      SPP
Sbjct: 112 PPPPGKPQG--PP--PQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPP 155

>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)|
          Length = 911

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 23/65 (35%), Positives = 27/65 (41%)
 Frame = -2

Query: 439 PSARGRGSTARNSAEQKLAAGGESPSRTGPDRAAQGRGPSGKEPPESQSGDLYPCSFPRA 260
           P A G    AR  A +    G   P  TGP  +   RGP+GK  P+  SG   P   P  
Sbjct: 628 PGANGEKG-ARGVAGKPGPRGQRGP--TGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGE 684

Query: 259 GGAWG 245
            G  G
Sbjct: 685 RGPQG 689

>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,|
           ankyrin repeat and pleckstrin homology domains 2)
           (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE)
          Length = 1186

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
 Frame = -2

Query: 442 RPSARGRGSTARNSAEQKLAAGGESPSRTGPDRAAQGRGPSGKEPPES------QSGDLY 281
           +P  +G  STA   A    A GG S + T       G G  GK  P         + DL+
Sbjct: 218 KPRVKGSKSTAGTGASAVAAGGGGSAAVTTSGGVGAGAGARGKLSPRKGKSKTLDNSDLH 277

Query: 280 P 278
           P
Sbjct: 278 P 278

>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor|
          Length = 1806

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 23/65 (35%), Positives = 27/65 (41%)
 Frame = -2

Query: 439  PSARGRGSTARNSAEQKLAAGGESPSRTGPDRAAQGRGPSGKEPPESQSGDLYPCSFPRA 260
            P A G    AR  A +    G   P  TGP  +   RGP+GK  P+  SG   P   P  
Sbjct: 861  PGANGEKG-ARGVAGKPGPRGQRGP--TGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGE 917

Query: 259  GGAWG 245
             G  G
Sbjct: 918  RGPQG 922

>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor|
          Length = 1464

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
 Frame = -2

Query: 442  RPSARGRGSTARNSAEQKLAAGGES-----PSRTGPDRAAQGRGPSGKEPPESQSGDLYP 278
            R SA   G+T    A  ++   G S     P   GP     G+GP G+  P  + G++ P
Sbjct: 865  RGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGP 924

Query: 277  CSFPRAGGAWG 245
               P   G  G
Sbjct: 925  PGPPGPAGEKG 935



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
 Frame = -2

Query: 421 GSTARNSAEQKLAAGG-----ESPSRTGPDRAAQGRGPSGKEPPESQSGDLYPCSFPRAG 257
           GS   N A  ++   G       P   GP  A    G +G   P   +G   P  FP A 
Sbjct: 290 GSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAV 349

Query: 256 GAWGXXXXXXEDPRGS 209
           GA G      + PRGS
Sbjct: 350 GAKG--EAGPQGPRGS 363

>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2|
          Length = 984

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 309 GSFPDGPRPCAARSGPVRDGDSPPA 383
           G+ P GPRP   R G  R GD  PA
Sbjct: 287 GARPAGPRPGGPRQGDSRPGDGRPA 311

>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
 Frame = -2

Query: 442 RPSARGRGSTARNSAEQKLAAGGESPSRTGPDRAAQGRGPSGKEPPESQSGDLYP---CS 272
           +P A+G   T     E  +         TGP  AA   GP+G   P    GD  P     
Sbjct: 740 QPGAKGEKGTKGPKGENGIVGP------TGPVGAAGPSGPNGPPGPAGSRGDGGPPGMTG 793

Query: 271 FPRAGGAWG 245
           FP A G  G
Sbjct: 794 FPGAAGRTG 802

>EHMT2_HUMAN (Q96KQ7) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Euchromatic histone-lysine
           N-methyltransferase 2) (HLA-B-associated transcript 8)
           (Protein G9a)
          Length = 1210

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -2

Query: 370 SPSRTG--PDRAAQGRGPSGKEPPESQSGDLYPCSFPRAGGA 251
           SPS+ G  P RA      +GK PP  QS  +   S P A GA
Sbjct: 119 SPSKGGSCPSRAKMSMTGAGKSPPSVQSLAMRLLSMPGAQGA 160

>EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Euchromatic histone-lysine
           N-methyltransferase 2) (HLA-B-associated transcript 8)
           (Protein G9a)
          Length = 1263

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -2

Query: 370 SPSRTG--PDRAAQGRGPSGKEPPESQSGDLYPCSFPRAGGA 251
           SPS+ G  P RA      +GK PP  QS  +   S P A GA
Sbjct: 172 SPSKGGACPSRAKMSMTGAGKSPPSVQSLAMRLLSMPGAQGA 213

>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
 Frame = -2

Query: 421 GSTARNSAEQKLAAGG-----ESPSRTGPDRAAQGRGPSGKEPPESQSGDLYPCSFPRAG 257
           GS   N A  ++   G       P  +GP  A    G  G   P   +G   P  FP A 
Sbjct: 279 GSPGENGAPGQMGPRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPTGPAGPPGFPGAA 338

Query: 256 GAWG 245
           GA G
Sbjct: 339 GAKG 342

>RYR1_PIG (P16960) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5035

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 439  PSARGRGSTARNSAEQKLAAGGESPSRTGPD-RAAQGRGPSGKEPPE 302
            P+ RG G +   +  ++     E P+R GP  R  + R   G+EPPE
Sbjct: 2367 PALRGEGGSGLLATIEEAIRISEDPARDGPGVRRDRRREHFGEEPPE 2413

>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor|
          Length = 1364

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
 Frame = -2

Query: 442 RPSARGRGSTARNSAEQKLAAGGESPSRTGPDRAAQGRGPSGKEPPESQSGDLYP---CS 272
           +P A+G   T     E     G   P  TGP  AA   GP+G   P    GD  P     
Sbjct: 732 QPGAKGERGTKGPKGEN----GPVGP--TGPVGAAGPSGPNGPPGPAGSRGDGGPPGATG 785

Query: 271 FPRAGGAWG 245
           FP A G  G
Sbjct: 786 FPGAAGRTG 794

>CABC1_HUMAN (Q8NI60) Chaperone-activity of bc1 complex-like, mitochondrial|
           precursor (Chaperone-ABC1-like)
          Length = 647

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +3

Query: 306 GGSFPDGPRPCAARSGPVRDGDSPPAASFCSAEFRAVDPLPRAEGR 443
           G +  +GP P    SGP R+   P  AS          PL RA GR
Sbjct: 108 GHAHSEGPAPAYVASGPFREAGFPGQAS---------SPLGRANGR 144

>TXLNA_HUMAN (P40222) Alpha-taxilin|
          Length = 546

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -2

Query: 406 NSAEQKLAAGGE-SPSRTGPDRAAQGRGPSGKEPPESQSGDLYP 278
           N   Q L+AGG+ S + +GP+R  +G G      P       YP
Sbjct: 482 NKRVQDLSAGGQGSLTDSGPERRPEGPGAQAPSSPRVTEAPCYP 525


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.133    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,686,306
Number of Sequences: 219361
Number of extensions: 698757
Number of successful extensions: 4131
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4094
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)