ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl20a11 |
|---|---|
| Clone Library Name | barley_pub |
>PRP39_SCHPO (O74970) Pre-mRNA-processing protein prp39| Length = 612 Score = 91.7 bits (226), Expect = 9e-19 Identities = 41/67 (61%), Positives = 47/67 (70%) Frame = +3 Query: 225 FETSIKRPFFHVKPLDDDQLENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRY 404 FE+ IKRP+FHVK LD+ QL NW YLDF E GDF LYERCLI CA Y EFW RY Sbjct: 263 FESEIKRPYFHVKELDEAQLVNWRKYLDFEEVEGDFQRICHLYERCLITCALYDEFWFRY 322 Query: 405 AEYVDAK 425 A ++ A+ Sbjct: 323 ARWMSAQ 329
>PRP39_YEAST (P39682) Pre-mRNA-processing protein PRP39| Length = 629 Score = 63.9 bits (154), Expect = 2e-10 Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 3/74 (4%) Frame = +3 Query: 213 EICGFETSIKRPFFHVKPLDDDQLENWNLYLDFV---EKNGDFDWAVKLYERCLIPCANY 383 EI FE+ IK+PFF++ + +D LENW+ YL FV K+ D ++ + +++RCLIPC + Sbjct: 230 EIWQFESKIKQPFFNLGQVLNDDLENWSRYLKFVTDPSKSLDKEFVMSVFDRCLIPCLYH 289 Query: 384 SEFWIRYAEYVDAK 425 W+ Y +++ K Sbjct: 290 ENTWMMYIKWLTKK 303
>CLF1_MAGGR (Q527H0) Pre-mRNA-splicing factor CLF1| Length = 691 Score = 40.0 bits (92), Expect = 0.003 Identities = 17/41 (41%), Positives = 27/41 (65%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEY 413 W Y+DF E+ G++D LYER L+ A++ + WI YA++ Sbjct: 512 WKSYIDFEEEEGEYDKTRSLYER-LLDKADHPKVWISYAQF 551 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +3 Query: 282 LENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAE 410 L+NW Y + + ++ + ++ER L AN WIRY E Sbjct: 72 LKNWLQYAQWELEQKEYARSRSVFERALNLHANKVTLWIRYVE 114
>CLF1_NEUCR (Q7SGD2) Pre-mRNA-splicing factor clf-1| Length = 695 Score = 39.7 bits (91), Expect = 0.004 Identities = 20/71 (28%), Positives = 39/71 (54%) Frame = +3 Query: 201 ELDKEICGFETSIKRPFFHVKPLDDDQLENWNLYLDFVEKNGDFDWAVKLYERCLIPCAN 380 +L++ FE ++ +P + + W Y+DF E+ G+++ LYER L+ A+ Sbjct: 489 DLERTRAIFELAVSQPILDMPEVV------WKAYIDFEEEEGEYERTRALYER-LLEKAD 541 Query: 381 YSEFWIRYAEY 413 + + WI YA++ Sbjct: 542 HPKVWISYAQF 552 Score = 30.4 bits (67), Expect = 2.6 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +3 Query: 279 QLENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAE 410 +L NW Y + + +F A ++ER L N ++ WIRY + Sbjct: 71 RLSNWLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYVQ 114
>CLF1_ASPFU (Q4WT84) Pre-mRNA-splicing factor clf1| Length = 676 Score = 38.5 bits (88), Expect = 0.009 Identities = 21/63 (33%), Positives = 32/63 (50%) Frame = +3 Query: 225 FETSIKRPFFHVKPLDDDQLENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRY 404 FE I +P + L W Y+DF E G++D +LYER L+ ++ + WI Y Sbjct: 493 FELGIDQPMLDMPELV------WKAYIDFEEYEGEYDRVRQLYER-LLQKTDHVKVWINY 545 Query: 405 AEY 413 A + Sbjct: 546 ARF 548
>CLF1_PARBR (Q5K654) Pre-mRNA-splicing factor CLF1| Length = 677 Score = 38.1 bits (87), Expect = 0.012 Identities = 21/71 (29%), Positives = 35/71 (49%) Frame = +3 Query: 201 ELDKEICGFETSIKRPFFHVKPLDDDQLENWNLYLDFVEKNGDFDWAVKLYERCLIPCAN 380 ++D+ +E I +P + L W Y+DF E G++D LYER L+ N Sbjct: 485 DIDRARAIYELGISQPVLDMPEL------LWKSYIDFEEYEGEYDRTRALYER-LLEKTN 537 Query: 381 YSEFWIRYAEY 413 + + WI +A + Sbjct: 538 HVKVWINFARF 548
>SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) Length = 981 Score = 35.8 bits (81), Expect = 0.061 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = +3 Query: 279 QLENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYVD 419 +L + Y+DF K GD ++ER L+ + WIRY++Y+D Sbjct: 327 RLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLD 373
>SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (mSART-3) (Tumor-rejection antigen SART3) Length = 962 Score = 35.8 bits (81), Expect = 0.061 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = +3 Query: 279 QLENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYVD 419 +L + Y+DF K GD ++ER L+ + WIRY++Y+D Sbjct: 310 RLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLD 356
>SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa) (Tip110) Length = 963 Score = 35.8 bits (81), Expect = 0.061 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = +3 Query: 279 QLENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYVD 419 +L + Y+DF K GD ++ER L+ + WIRY++Y+D Sbjct: 309 RLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLD 355
>CLF1_EMENI (Q5BDX1) Pre-mRNA-splicing factor clf1| Length = 602 Score = 34.7 bits (78), Expect = 0.14 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEY 413 W Y+DF + G+++ +LYER L+ ++ + WI YA + Sbjct: 438 WKAYIDFEDDEGEYERERQLYER-LLQKTDHVKVWINYARF 477
>CRN_DROME (P17886) Protein crooked neck| Length = 702 Score = 33.9 bits (76), Expect = 0.23 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCL--IPCANYSEFWIRY 404 W YL +E GD D + YER + +P AN FW RY Sbjct: 328 WFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRY 367 Score = 30.4 bits (67), Expect = 2.6 Identities = 18/71 (25%), Positives = 36/71 (50%) Frame = +3 Query: 201 ELDKEICGFETSIKRPFFHVKPLDDDQLENWNLYLDFVEKNGDFDWAVKLYERCLIPCAN 380 + D+ FE ++++P + L W Y+DF G+ + A +LYER L+ Sbjct: 489 DTDRARAIFELAVQQPRLDMPEL------LWKAYIDFEVALGETELARQLYER-LLERTQ 541 Query: 381 YSEFWIRYAEY 413 + + W+ +A++ Sbjct: 542 HVKVWMSFAKF 552
>SUF_DROME (P25991) Protein suppressor of forked| Length = 733 Score = 32.7 bits (73), Expect = 0.52 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYV-DAKGGREIANYALGRAS 467 W LY++ ++ ++ KL++RCL+ N + W Y YV + K G + +A Sbjct: 69 WKLYIEMEMRSRYYERVEKLFQRCLVKILNI-DLWKLYLTYVKETKSGLSTHKEKMAQAY 127 Query: 468 SF 473 F Sbjct: 128 DF 129
>CLF1_CRYNV (Q9HF03) Pre-mRNA-splicing factor CLF1 (crooked-neck-like protein| 1) Length = 724 Score = 32.7 bits (73), Expect = 0.52 Identities = 17/62 (27%), Positives = 29/62 (46%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYVDAKGGREIANYALGRASS 470 W Y+ E+ + D A +YER I C + W+ +A++ + +G + A A Sbjct: 179 WQSYIKLEERYNELDRASAIYERW-IACRPIPKNWVAWAKFEEDRGQPDKAREVFQTALE 237 Query: 471 FF 476 FF Sbjct: 238 FF 239 Score = 31.2 bits (69), Expect = 1.5 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYA--EYVDAKGGRE 437 W Y+DF G+ + A LYER L+ ++ + WI YA E GG + Sbjct: 525 WKAYIDFEAGEGERERARNLYER-LLERTSHVKVWISYALMEIATLGGGED 574
>CLF1_CRYNE (Q5KNE9) Pre-mRNA-splicing factor CLF1| Length = 726 Score = 32.7 bits (73), Expect = 0.52 Identities = 17/62 (27%), Positives = 29/62 (46%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYVDAKGGREIANYALGRASS 470 W Y+ E+ + D A +YER I C + W+ +A++ + +G + A A Sbjct: 179 WQSYIKLEERYNELDRASAIYERW-IACRPIPKNWVTWAKFEEDRGQPDKAREVFQTALE 237 Query: 471 FF 476 FF Sbjct: 238 FF 239 Score = 31.2 bits (69), Expect = 1.5 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYA--EYVDAKGGRE 437 W Y+DF G+ + A LYER L+ ++ + WI YA E GG + Sbjct: 525 WKAYIDFEAGEGERERARNLYER-LLERTSHVKVWISYALMEIATLGGGED 574
>SYF1_EMENI (Q5BH69) Pre-mRNA-splicing factor syf1| Length = 851 Score = 32.7 bits (73), Expect = 0.52 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 15/95 (15%) Frame = +3 Query: 180 RFYQRSSELDKEICGFETSIKRPFFHVKPLDDDQLENWNLYLDFVEKNGDFDWAVKL--- 350 +FY+R +LD FE ++K PF V L E W + + ++ +FD AV++ Sbjct: 428 KFYERGGDLDTARIIFEKAVKVPFKSVNEL----AETWCEWAEMELRSENFDKAVEIMAK 483 Query: 351 ------------YERCLIPCANYSEFWIRYAEYVD 419 ++ L P + W ++ YVD Sbjct: 484 ATQAPKKSTVDYFDETLSPQQRIHKSWKLWSFYVD 518
>SYF1_KLULA (Q6CYA2) Pre-mRNA-splicing factor SYF1| Length = 798 Score = 32.0 bits (71), Expect = 0.88 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 13/79 (16%) Frame = +3 Query: 258 VKPLDDD-----QLENWNLYL----DFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAE 410 +K + DD + W + L D +++ L+E+CL C + WI Y E Sbjct: 52 LKEIKDDWHLWKEFLKWRIELLNDCDIFRHKDEYNKISLLFEQCLTSCGKVGDAWIMYME 111 Query: 411 YV----DAKGGREIANYAL 455 +V D K RE+ AL Sbjct: 112 WVIQFKDLKRIRELLGKAL 130
>SYD_THETN (Q8RAI7) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 592 Score = 31.6 bits (70), Expect = 1.2 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 8/83 (9%) Frame = +3 Query: 63 EAMEAEESEGY--ISSKGSVLFDQGGHLKPEALKQYLIAGERFYQRSSELDKEICGFETS 236 E +EAE + ++ K V+FD GHL+ E K++ + E Y+ +D + ++ Sbjct: 388 ERLEAEVGDLLLIVADKDEVVFDTLGHLRVEMAKRFNLIDESKYEFVWVVDFPLLEYDEE 447 Query: 237 IKR------PFFHVKPLDDDQLE 287 KR PF K D D LE Sbjct: 448 EKRYVAKHHPFTSPKDEDIDLLE 470
>PNT1_DROME (P51022) ETS-like protein pointed, isoform P1 (D-ETS-2)| Length = 623 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Frame = -3 Query: 450 HSLQSLCHLWHQHTQHSESKTQNN*RMGSSISHKVLQPNQNRHSSQQSQDTG--SSFQVG 277 H L L HT + + Q + + H Q Q+ H SQQ Q G SS Q+ Sbjct: 88 HQLAQQTGLHSHHTMQQQLQQQ---QQSLLLQHPQQQQQQHSHQSQQQQQHGYGSSAQLP 144 Query: 276 HHQVA 262 HH+++ Sbjct: 145 HHRLS 149
>CSTF3_PONPY (Q5RDW9) Cleavage stimulation factor, 77 kDa subunit (CSTF 77 kDa| subunit) (CF-1 77 kDa subunit) (CstF-77) Length = 717 Score = 31.2 bits (69), Expect = 1.5 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYVDAKGGR 434 W LY++ K ++D KL++RCL+ + + W Y YV G+ Sbjct: 68 WKLYIEAEIKAKNYDKVEKLFQRCLMKVL-HIDLWKCYLSYVRETKGK 114
>CSTF3_MOUSE (Q99LI7) Cleavage stimulation factor, 77 kDa subunit (CSTF 77 kDa| subunit) (CF-1 77 kDa subunit) (CstF-77) Length = 717 Score = 31.2 bits (69), Expect = 1.5 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYVDAKGGR 434 W LY++ K ++D KL++RCL+ + + W Y YV G+ Sbjct: 68 WKLYIEAEIKAKNYDKVEKLFQRCLMKVL-HIDLWKCYLSYVRETKGK 114
>CSTF3_HUMAN (Q12996) Cleavage stimulation factor, 77 kDa subunit (CSTF 77 kDa| subunit) (CF-1 77 kDa subunit) (CstF-77) Length = 717 Score = 31.2 bits (69), Expect = 1.5 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +3 Query: 291 WNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYVDAKGGR 434 W LY++ K ++D KL++RCL+ + + W Y YV G+ Sbjct: 68 WKLYIEAEIKAKNYDKVEKLFQRCLMKVL-HIDLWKCYLSYVRETKGK 114
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 30.4 bits (67), Expect = 2.6 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%) Frame = -3 Query: 459 DQEHSLQSLCHLWHQHTQHSESKTQNN*RMGSSISHKVLQPNQNR----HSSQQSQDTGS 292 D+ S +S H H+H H E + +++ G S Q +++R + D G Sbjct: 355 DEGDSTESDRHQAHRHRGHREEEDEDDDDEGDSTESDRHQAHRHRGHREEEDEDDDDEGD 414 Query: 291 SFQVGHHQVA*H 256 S + HHQ H Sbjct: 415 STESDHHQAHRH 426
>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21| Length = 2189 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/59 (32%), Positives = 22/59 (37%) Frame = -3 Query: 444 LQSLCHLWHQHTQHSESKTQNN*RMGSSISHKVLQPNQNRHSSQQSQDTGSSFQVGHHQ 268 LQ H HQH QH + Q G V Q Q +H QQ Q Q+ Q Sbjct: 1324 LQQQQHQQHQHQQHPQQPQQ----QGQVQQQVVSQQQQQQHQPQQQQQPQQQQQLQQQQ 1378
>QSEC_HAEIN (P45336) Sensor protein qseC (EC 2.7.13.3)| Length = 451 Score = 29.6 bits (65), Expect = 4.4 Identities = 15/39 (38%), Positives = 25/39 (64%) Frame = +3 Query: 96 ISSKGSVLFDQGGHLKPEALKQYLIAGERFYQRSSELDK 212 ISS ++ D GG ++PE LK+ G+RFY+ + + +K Sbjct: 376 ISSSQIIIEDNGGGVEPEDLKK---LGQRFYRPAGQNEK 411
>CP3AC_CANFA (P24463) Cytochrome P450 3A12 (EC 1.14.14.1) (CYPIIIA12)| (P450-PBD-1) Length = 503 Score = 29.6 bits (65), Expect = 4.4 Identities = 24/75 (32%), Positives = 35/75 (46%) Frame = -1 Query: 434 SATFGINILSIANPKLRIISAWDQASLIKFYSPIKIAILLNKVKIQVPVFKLVIIKWLDM 255 S +FG+NI S+ +P+ + + F P +ILL PVF+++ I WL Sbjct: 186 STSFGVNIDSLNHPQDPFVENTKKLLKFDFLDPFFFSILL--FPFLTPVFEILNI-WLFP 242 Query: 254 KKRPFDGCLKATDFF 210 K K TDFF Sbjct: 243 K--------KVTDFF 249
>CLF1_USTMA (Q4PB37) Pre-mRNA-splicing factor CLF1| Length = 781 Score = 29.6 bits (65), Expect = 4.4 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = +3 Query: 279 QLENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAE----YVDAKGGREIAN 446 +L+ ++ Y++ +FD A K+YE+ L S+ W+R+AE D R + Sbjct: 457 KLKLFSSYIELEVSLKEFDRARKIYEKALEWDPTNSQTWVRFAELEKNLFDTDRARALFE 516 Query: 447 YALGRA 464 +G+A Sbjct: 517 LGVGQA 522 Score = 28.9 bits (63), Expect = 7.5 Identities = 12/43 (27%), Positives = 19/43 (44%) Frame = +3 Query: 282 LENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAE 410 + W Y + G+ D +YER L ++ W+RY E Sbjct: 70 MSTWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTE 112
>COPB_ENTHR (P05425) Probable copper exporting ATPase B (EC 3.6.3.4)| Length = 745 Score = 29.3 bits (64), Expect = 5.7 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = +3 Query: 6 EQEVTHCGAEISPENLHTFEAMEAEESEGYISSKGSVLFDQGGHLKPEALKQYLIA 173 E+E G +I PE L +EA S +S K + G +KPEA K+++ A Sbjct: 525 EKEAKRLGLKIDPERLKNYEAQGNTVSFLVVSDKLVAVIALGDVIKPEA-KEFIQA 579
>ENGC_STAHJ (Q4L5S2) Probable GTPase engC (EC 3.6.1.-)| Length = 291 Score = 29.3 bits (64), Expect = 5.7 Identities = 31/99 (31%), Positives = 38/99 (38%), Gaps = 3/99 (3%) Frame = +3 Query: 3 LEQEVTHCGAEISPENLHTFEAMEAEESE-GYISSKGSVLFDQGGHLKPEALKQYLIAGE 179 L E H ++ HT +E E E G+I+ GH+ + LK Y I Sbjct: 181 LNLETNHISKSLN-RGKHTTRHVELFERESGFIADTPGFSALDFGHIDKDELKHYFIEMN 239 Query: 180 RFYQRSSELDKEICGFE--TSIKRPFFHVKPLDDDQLEN 290 RF E C F IK P HVK QLEN Sbjct: 240 RF--------GEECKFRNCNHIKEPKCHVK----QQLEN 266
>FAEHP_ARCFU (O28964) Fae/hps bifunctional enzyme [Includes:| Formaldehyde-activating enzyme (EC 4.3.-.-) (Fae); 3-hexulose-6-phosphate synthase (EC 4.1.2.-) (HPS) (D-arabino-3-hexulose-6-phosphate formaldehyde lyase)] Length = 394 Score = 29.3 bits (64), Expect = 5.7 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Frame = +3 Query: 30 AEISPENLHTFEAMEAEESE------GYISSKGSVLFDQGGHLKPEALKQYLIAGERFYQ 191 A + P + A+++E+ E G I K SVL G ++PE +++ + AG Sbjct: 300 AGVLPNVVELHRAIDSEDKEPPWMLAGKIKEKFSVLVAVAGGIRPENVEEVIAAGADIIV 359 Query: 192 RSSELDKEICGFETSIKRPFFHVKPLDDDQ 281 + K E ++++ H+KP D DQ Sbjct: 360 VGRAVTK-ARDVEGAVRKFMSHMKP-DTDQ 387
>TRXR_CAEEL (Q17745) Thioredoxin reductase (EC 1.8.1.9) (TR-Se) (TRR)| Length = 667 Score = 28.9 bits (63), Expect = 7.5 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +3 Query: 108 GSVLFDQGGHLKPEALKQYLIAGERFYQRSSELDKEICGFET---SIKRPFFHVKPLDDD 278 G L D G EALK+ + + SS+ +K++ FET S+K P KPL+ Sbjct: 57 GETLVDAPGIPLKEALKEAANSKIVIFYNSSDEEKQLVEFETYLNSLKEPADAEKPLEIP 116 Query: 279 QLE 287 +++ Sbjct: 117 EIK 119
>SYA_PELUB (Q4FMX6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 889 Score = 28.9 bits (63), Expect = 7.5 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +3 Query: 135 HLKPEALKQYLIAGERFYQRSSELDKEICGFETSIKRPFFHVKPLDDDQLENWNLYLD-F 311 HL EAL++ L GE Q+ S + + F+ F H+KP+ D+++ Y++ Sbjct: 568 HLLHEALRRVL--GEHVTQKGSLVQSDRLRFD------FSHMKPISDEEIRKIEHYVNSI 619 Query: 312 VEKNGD 329 +EK + Sbjct: 620 IEKKSE 625
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = -3 Query: 456 QEHSLQSLCHLWHQHTQHSESKTQNN*RMGSSISHKVLQPNQNRHSSQQSQ 304 Q+ Q H QH QHS+ + Q+ H NQ +H QQ+Q Sbjct: 209 QQQQQQQQHHQQQQHHQHSQPQQQHQHNQQQQHQH-----NQQQHQQQQNQ 254
>SIAT9_HUMAN (Q9UNP4) Lactosylceramide alpha-2,3-sialyltransferase (EC 2.4.99.9)| (CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase) (Ganglioside GM3 synthase) (ST3Gal V) (Sialyltransferase 9) Length = 362 Score = 28.9 bits (63), Expect = 7.5 Identities = 17/68 (25%), Positives = 35/68 (51%) Frame = +3 Query: 213 EICGFETSIKRPFFHVKPLDDDQLENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEF 392 E G +T+I+ + PL D + + +L++ + K+ DF+W + ++ +P F Sbjct: 176 EHVGNKTTIRMTYPEGAPLSDLEYYSNDLFVAVLFKSVDFNWLQAMVKKETLPFWVRLFF 235 Query: 393 WIRYAEYV 416 W + AE + Sbjct: 236 WKQVAEKI 243
>CP3AG_MOUSE (Q64481) Cytochrome P450 3A16 (EC 1.14.14.1) (CYPIIIA16)| Length = 504 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/56 (23%), Positives = 30/56 (53%) Frame = -1 Query: 437 LSATFGINILSIANPKLRIISAWDQASLIKFYSPIKIAILLNKVKIQVPVFKLVII 270 +S TFG+NI S+ NP+ + + ++ P+ +++ L P+++++ I Sbjct: 185 ISTTFGVNIDSLNNPEDPFVENAKKVLRFDYFDPLSLSVAL--FPFLTPIYEMLNI 238
>CP3A2_RAT (P05183) Cytochrome P450 3A2 (EC 1.14.14.1) (CYPIIIA2) (P450-PCN2)| (P450/6-beta-A) (Testosterone 6-beta-hydroxylase) Length = 504 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/55 (23%), Positives = 30/55 (54%) Frame = -1 Query: 434 SATFGINILSIANPKLRIISAWDQASLIKFYSPIKIAILLNKVKIQVPVFKLVII 270 S +FG+N+ S+ NPK + + F+ P+ ++++L P+++++ I Sbjct: 186 STSFGVNVDSLNNPKDPFVEKTKKLLRFDFFDPLFLSVVL--FPFLTPIYEMLNI 238
>CP3A1_RAT (P04800) Cytochrome P450 3A1 (EC 1.14.14.1) (CYPIIIA1) (P450-PCN1)| Length = 504 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/55 (23%), Positives = 30/55 (54%) Frame = -1 Query: 434 SATFGINILSIANPKLRIISAWDQASLIKFYSPIKIAILLNKVKIQVPVFKLVII 270 S +FG+N+ S+ NPK + + F+ P+ ++++L P+++++ I Sbjct: 186 STSFGVNVDSLNNPKDPFVEKTKKLLRFDFFDPLFLSVVL--FPFLTPIYEMLNI 238
>SYF1_USTMA (Q4P7S1) Pre-mRNA-splicing factor SYF1| Length = 1081 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = +3 Query: 282 LENWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYVD 419 L+ W+ Y+D E GD + ++YE+ L ++ I YA +++ Sbjct: 733 LKLWSFYVDLEESLGDVESTKRVYEKMLELKIASAQIIINYAAFLE 778
>YHR7_YEAST (P38825) Hypothetical 71.9 kDa protein in ERP5-ORC6 intergenic| region Length = 639 Score = 28.5 bits (62), Expect = 9.7 Identities = 19/79 (24%), Positives = 31/79 (39%) Frame = +3 Query: 120 FDQGGHLKPEALKQYLIAGERFYQRSSELDKEICGFETSIKRPFFHVKPLDDDQLENWNL 299 F + L PE + Y+ Y++ + E ET +K P P Sbjct: 435 FQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVP---------TF 485 Query: 300 YLDFVEKNGDFDWAVKLYE 356 + + + GDFD A+K Y+ Sbjct: 486 FAEILTDRGDFDTAIKQYD 504
>LEF1_NPVAC (P41417) Late expression factor 1| Length = 266 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = +3 Query: 168 IAGERFYQRSSELDKEICGFETSIKRPFFHVKPLDDDQLENWNLYLDFVEKNGDFDWAVK 347 I +R++ S++L I + S HVKPLDD W + D+ + D +K Sbjct: 36 IHADRYFDTSAQLYSYIVQNKVSD----VHVKPLDDGGGREWVVDADYKNYVDEHDLMLK 91 Query: 348 LY 353 +Y Sbjct: 92 IY 93
>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane| protein) Length = 2038 Score = 28.5 bits (62), Expect = 9.7 Identities = 19/71 (26%), Positives = 28/71 (39%) Frame = -3 Query: 474 KMMKLDQEHSLQSLCHLWHQHTQHSESKTQNN*RMGSSISHKVLQPNQNRHSSQQSQDTG 295 + M+L Q+H Q Q QH + Q + ++ + LQ Q + QQ Sbjct: 1503 QQMQLQQQHHQQQQQQTHQQQQQHQQQHHQQ--QQQQQLTQQQLQQQQQQQQQQQHLQQ- 1559 Query: 294 SSFQVGHHQVA 262 Q HHQ A Sbjct: 1560 QQHQQQHHQAA 1570
>YKP5_YEAST (P36056) Hypothetical 72.2 kDa protein in RPS27A-GPM1 intergenic| region Length = 628 Score = 28.5 bits (62), Expect = 9.7 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = +3 Query: 168 IAGERFYQRSSELDKEICGFETSIKRPFFHVK 263 + FY D + C F+ SIKRP F ++ Sbjct: 383 VGNPNFYTHKEGKDLKFCNFQKSIKRPKFSIE 414 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,525,780 Number of Sequences: 219361 Number of extensions: 1398417 Number of successful extensions: 4470 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 4264 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4463 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
