ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl20a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479642.1| Oryza sativa (japonica cultivar-group), mRNA 84 5e-13
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
3dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
5dbj|AK112003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
6dbj|AK111549.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
7gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.44
8gb|AY570630.1| Uncultured bacterium clone PL-37B6 16S ribosomal ... 42 1.7
9ref|NM_190435.1| Oryza sativa (japonica cultivar-group), predic... 42 1.7
10gb|AY512583.1| Oryza sativa iron-phytosiderophore transporter pr... 42 1.7
11gb|AC124765.2| Mus musculus BAC clone RP23-197D9 from 2, complet... 42 1.7
12gb|AC090529.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 1.7
13dbj|AB190926.1| Oryza sativa (japonica cultivar-group) osysl18 m... 42 1.7
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
15dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
16dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
17gb|AY953241.1| Uncultured anaerobic bacterium clone A-3P 16S rib... 42 1.7
18dbj|AK070618.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
19emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chro... 42 1.7
20emb|AJ488072.1|UBA488072 Uncultured bacterium partial 16S rRNA g... 42 1.7
21emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 42 1.7
22gb|DQ214362.1| Taeniopygia guttata clone 0065P0009D08 leucine-zi... 40 6.9
23ref|NM_197626.1| Oryza sativa (japonica cultivar-group) putative... 40 6.9
24gb|BT018275.1| Zea mays clone EL01T0203F04.c mRNA sequence 40 6.9
25gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete... 40 6.9
26gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, com... 40 6.9
27gb|AC125221.4| Mus musculus BAC clone RP23-74N13 from chromosome... 40 6.9
28emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in ... 40 6.9
29gb|AC024607.3| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 6.9
30ref|XM_546176.2| PREDICTED: Canis familiaris similar to zinc fin... 40 6.9
31emb|BX294129.10| Zebrafish DNA sequence from clone DKEYP-34H12 i... 40 6.9
32gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell... 40 6.9
33gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 gen... 40 6.9
34gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswel... 40 6.9
35ref|NM_165585.1| Drosophila melanogaster CG12769-RB, transcript ... 40 6.9
36ref|NM_136503.2| Drosophila melanogaster CG12769-RA, transcript ... 40 6.9
37gb|AY070889.1| Drosophila melanogaster LD46223 full length cDNA 40 6.9
38dbj|AK157592.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.9
39emb|AL732483.8| Mouse DNA sequence from clone RP23-70K10 on chro... 40 6.9
40dbj|AB126869.1| Danio rerio INF-g gene for interferon gamma, com... 40 6.9
41emb|BX932133.2| Gallus gallus finished cDNA, clone ChEST1032g23 40 6.9
42dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
43dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
44gb|AC092843.4| Homo sapiens BAC clone RP11-419O4 from 2, complet... 40 6.9
45gb|AC068252.9| Mus musculus chromosome 5, clone RP23-312J7, comp... 40 6.9
46dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
47emb|BX005382.6| Zebrafish DNA sequence from clone DKEY-242E14, c... 40 6.9
48ref|XM_318953.2| Anopheles gambiae str. PEST ENSANGP00000015142 ... 40 6.9
49dbj|AK070040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
50gb|AY112569.1| Zea mays CL3104_1 mRNA sequence 40 6.9
51emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in... 40 6.9
52gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12... 40 6.9
53gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32... 40 6.9
54gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62... 40 6.9
55gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, r... 40 6.9
56gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, ... 40 6.9
57dbj|AP001687.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.9
58gb|AC005473.1|AC005473 Drosophila melanogaster, chromosome 2R, r... 40 6.9
59dbj|AP000459.4| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 6.9
60gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
61emb|AL672299.14| Mouse DNA sequence from clone RP23-287A19 on ch... 40 6.9
62emb|AL133222.2|HS69P17 Homo sapiens chromosome 21 BAC RPCIP704P1... 40 6.9 
>ref|XM_479642.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 246

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 243 tcatcagagaggaagaaccccaccaatttccaatttgagcgtcatgtagctcgtcttgaa 302
           |||||||| |||||||||||   |||| |||||||||| ||||| |||||||||||||||
Sbjct: 139 tcatcagaaaggaagaacccactcaatgtccaatttgaacgtcaagtagctcgtcttgaa 198

                         
Query: 303 tctagacagcagca 316
           || |||||||||||
Sbjct: 199 tcaagacagcagca 212
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
             complete sequence
          Length = 28434780

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 282   cgtcatgtagctcgtcttgaatctagacagcagca 316
             ||||| ||||||||||||||||| |||||||||||
Sbjct: 41727 cgtcaagtagctcgtcttgaatcaagacagcagca 41761



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 385   catctccagaagatagccttgac 407
             |||||||||||||||||||||||
Sbjct: 42050 catctccagaagatagccttgac 42072
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>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1147B12
          Length = 127902

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 282   cgtcatgtagctcgtcttgaatctagacagcagca 316
             ||||| ||||||||||||||||| |||||||||||
Sbjct: 41727 cgtcaagtagctcgtcttgaatcaagacagcagca 41761



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 385   catctccagaagatagccttgac 407
             |||||||||||||||||||||||
Sbjct: 42050 catctccagaagatagccttgac 42072
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 100     ggatcggagcggagcggagcgg 121
               ||||||||||||||||||||||
Sbjct: 4900711 ggatcggagcggagcggagcgg 4900690
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>dbj|AK112003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F01, full
           insert sequence
          Length = 947

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 100 ggatcggagcggagcggagcgg 121
           ||||||||||||||||||||||
Sbjct: 88  ggatcggagcggagcggagcgg 67
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>dbj|AK111549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C14, full
           insert sequence
          Length = 2920

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 100 ggatcggagcggagcggagcgg 121
           ||||||||||||||||||||||
Sbjct: 109 ggatcggagcggagcggagcgg 88
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
              complete sequence
          Length = 187956

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 100    ggatcggagcggagcggagcgg 121
              ||||||||||||||||||||||
Sbjct: 173119 ggatcggagcggagcggagcgg 173098
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>gb|AY570630.1| Uncultured bacterium clone PL-37B6 16S ribosomal RNA gene, partial
           sequence
          Length = 1483

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 449 tgtggcagatgaacctctcag 469
           |||||||||||||||||||||
Sbjct: 323 tgtggcagatgaacctctcag 303
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>ref|NM_190435.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2040

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 278  tgagcgtcatgtagctcgtcttgaa 302
            ||||||||| |||||||||||||||
Sbjct: 1459 tgagcgtcaggtagctcgtcttgaa 1435
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>gb|AY512583.1| Oryza sativa iron-phytosiderophore transporter protein yellow stripe
            1 mRNA, complete cds
          Length = 2040

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 278  tgagcgtcatgtagctcgtcttgaa 302
            ||||||||| |||||||||||||||
Sbjct: 1459 tgagcgtcaggtagctcgtcttgaa 1435
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>gb|AC124765.2| Mus musculus BAC clone RP23-197D9 from 2, complete sequence
          Length = 191781

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 130    ccctcccccctgccgcggcggccac 154
              |||||||||| ||||||||||||||
Sbjct: 116918 ccctccccccggccgcggcggccac 116894
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>gb|AC090529.2| Rattus norvegicus strain Brown Norway clone RP31-160L19, complete
             sequence
          Length = 165686

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 454   cagatgaacctctcagaaaat 474
             |||||||||||||||||||||
Sbjct: 46378 cagatgaacctctcagaaaat 46358
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>dbj|AB190926.1| Oryza sativa (japonica cultivar-group) osysl18 mRNA for hypothetical
            protein, complete cds
          Length = 2040

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 278  tgagcgtcatgtagctcgtcttgaa 302
            ||||||||| |||||||||||||||
Sbjct: 1459 tgagcgtcaggtagctcgtcttgaa 1435
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 278      tgagcgtcatgtagctcgtcttgaa 302
                ||||||||| |||||||||||||||
Sbjct: 35496008 tgagcgtcaggtagctcgtcttgaa 35496032
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>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446G04
          Length = 143515

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 278   tgagcgtcatgtagctcgtcttgaa 302
             ||||||||| |||||||||||||||
Sbjct: 26195 tgagcgtcaggtagctcgtcttgaa 26219
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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1088C09
          Length = 154084

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 278    tgagcgtcatgtagctcgtcttgaa 302
              ||||||||| |||||||||||||||
Sbjct: 119957 tgagcgtcaggtagctcgtcttgaa 119981
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>gb|AY953241.1| Uncultured anaerobic bacterium clone A-3P 16S ribosomal RNA gene,
           partial sequence
          Length = 1355

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 449 tgtggcagatgaacctctcag 469
           |||||||||||||||||||||
Sbjct: 290 tgtggcagatgaacctctcag 270
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>dbj|AK070618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063A19, full
            insert sequence
          Length = 2506

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 278  tgagcgtcatgtagctcgtcttgaa 302
            ||||||||| |||||||||||||||
Sbjct: 1753 tgagcgtcaggtagctcgtcttgaa 1729
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>emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chromosome 2, complete
              sequence
          Length = 219568

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 130    ccctcccccctgccgcggcggccac 154
              |||||||||| ||||||||||||||
Sbjct: 186093 ccctccccccggccgcggcggccac 186117
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>emb|AJ488072.1|UBA488072 Uncultured bacterium partial 16S rRNA gene, clone IA-19
          Length = 1509

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 449 tgtggcagatgaacctctcag 469
           |||||||||||||||||||||
Sbjct: 322 tgtggcagatgaacctctcag 302
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 98      tgggatcggagcggagcggag 118
               |||||||||||||||||||||
Sbjct: 2833758 tgggatcggagcggagcggag 2833738
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>gb|DQ214362.1| Taeniopygia guttata clone 0065P0009D08 leucine-zipper motif 2
           variant 1-like mRNA, complete sequence
          Length = 1274

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  gggatcggagcggagcggagcggc 122
           |||| |||||||||||||||||||
Sbjct: 8   gggagcggagcggagcggagcggc 31
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>ref|NM_197626.1| Oryza sativa (japonica cultivar-group) putative anion transporter
           (OSJNBa0001O14.19), mRNA
          Length = 1458

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 407 ctcggcatcctccccgccat 426
           ||||||||||||||||||||
Sbjct: 544 ctcggcatcctccccgccat 563
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>gb|BT018275.1| Zea mays clone EL01T0203F04.c mRNA sequence
          Length = 1326

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 cggagcggagcggagcggca 123
           ||||||||||||||||||||
Sbjct: 69  cggagcggagcggagcggca 50
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>gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete sequence
          Length = 167107

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   atcggagcggagcggagcgg 121
             ||||||||||||||||||||
Sbjct: 77131 atcggagcggagcggagcgg 77112
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>gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, complete sequence
          Length = 194800

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   tcatcagagaggaagaaccc 262
             ||||||||||||||||||||
Sbjct: 53356 tcatcagagaggaagaaccc 53337
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>gb|AC125221.4| Mus musculus BAC clone RP23-74N13 from chromosome 7, complete sequence
          Length = 215384

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    tcatcagagaggaagaaccc 262
              ||||||||||||||||||||
Sbjct: 130675 tcatcagagaggaagaaccc 130656
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>emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in linkage group 11,
             complete sequence
          Length = 231837

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   caattattttcttgcatttt 446
             ||||||||||||||||||||
Sbjct: 75089 caattattttcttgcatttt 75070
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>gb|AC024607.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-240H6, complete
              sequence
          Length = 197273

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    cagatgaacctctcagaaaa 473
              ||||||||||||||||||||
Sbjct: 134412 cagatgaacctctcagaaaa 134393
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>ref|XM_546176.2| PREDICTED: Canis familiaris similar to zinc finger protein 503
            (LOC489058), mRNA
          Length = 2339

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  gctcctccctcccccctgcc 143
            ||||||||||||||||||||
Sbjct: 2331 gctcctccctcccccctgcc 2312
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>emb|BX294129.10| Zebrafish DNA sequence from clone DKEYP-34H12 in linkage group 13,
             complete sequence
          Length = 156627

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    gggatcggagcggagcggag 118
             ||||||||||||||||||||
Sbjct: 74110 gggatcggagcggagcggag 74129
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>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    ggagcggagcggagcggcag 124
              ||||||||||||||||||||
Sbjct: 120680 ggagcggagcggagcggcag 120699
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>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete
              sequence
          Length = 178022

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 407    ctcggcatcctccccgccat 426
              ||||||||||||||||||||
Sbjct: 161128 ctcggcatcctccccgccat 161147
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>gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 173109

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   ggagcggagcggagcggcag 124
             ||||||||||||||||||||
Sbjct: 20254 ggagcggagcggagcggcag 20273
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>ref|NM_165585.1| Drosophila melanogaster CG12769-RB, transcript variant B (CG12769),
            mRNA
          Length = 2958

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  atcggagcggagcggagcgg 121
            ||||||||||||||||||||
Sbjct: 2512 atcggagcggagcggagcgg 2531
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>ref|NM_136503.2| Drosophila melanogaster CG12769-RA, transcript variant A (CG12769),
            mRNA
          Length = 3866

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  atcggagcggagcggagcgg 121
            ||||||||||||||||||||
Sbjct: 3420 atcggagcggagcggagcgg 3439
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>gb|AY070889.1| Drosophila melanogaster LD46223 full length cDNA
          Length = 3902

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  atcggagcggagcggagcgg 121
            ||||||||||||||||||||
Sbjct: 3414 atcggagcggagcggagcgg 3433
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>dbj|AK157592.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830225E14 product:hypothetical protein,
            full insert sequence
          Length = 2485

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  agacagcagcagcaacccag 325
            ||||||||||||||||||||
Sbjct: 2152 agacagcagcagcaacccag 2133
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>emb|AL732483.8| Mouse DNA sequence from clone RP23-70K10 on chromosome 2, complete
              sequence
          Length = 201542

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    agacagcagcagcaacccag 325
              ||||||||||||||||||||
Sbjct: 158527 agacagcagcagcaacccag 158508
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>dbj|AB126869.1| Danio rerio INF-g gene for interferon gamma, complete cds
          Length = 2840

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  aattattttcttgcatttta 447
            ||||||||||||||||||||
Sbjct: 1798 aattattttcttgcatttta 1817
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>emb|BX932133.2| Gallus gallus finished cDNA, clone ChEST1032g23
          Length = 833

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 cggagcggagcggagcggcagctc 127
           ||||||||||||||||||| ||||
Sbjct: 31  cggagcggagcggagcggcggctc 8
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 407      ctcggcatcctccccgccat 426
                ||||||||||||||||||||
Sbjct: 20898729 ctcggcatcctccccgccat 20898748
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 302      atctagacagcagcagcaac 321
                ||||||||||||||||||||
Sbjct: 20295259 atctagacagcagcagcaac 20295278
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>gb|AC092843.4| Homo sapiens BAC clone RP11-419O4 from 2, complete sequence
          Length = 83412

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 308  acagcagcagcaacccaggc 327
            ||||||||||||||||||||
Sbjct: 4618 acagcagcagcaacccaggc 4599
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>gb|AC068252.9| Mus musculus chromosome 5, clone RP23-312J7, complete sequence
          Length = 190438

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    gctcctccctcccccctgcc 143
              ||||||||||||||||||||
Sbjct: 117071 gctcctccctcccccctgcc 117052
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>dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0006J22
          Length = 145271

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   atctagacagcagcagcaac 321
             ||||||||||||||||||||
Sbjct: 46064 atctagacagcagcagcaac 46083
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>emb|BX005382.6| Zebrafish DNA sequence from clone DKEY-242E14, complete sequence
          Length = 161366

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   caattattttcttgcatttt 446
             ||||||||||||||||||||
Sbjct: 10944 caattattttcttgcatttt 10925
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>ref|XM_318953.2| Anopheles gambiae str. PEST ENSANGP00000015142 (ENSANGG00000012653),
            partial mRNA
          Length = 2459

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 408  tcggcatcctccccgccatc 427
            ||||||||||||||||||||
Sbjct: 2232 tcggcatcctccccgccatc 2251
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>dbj|AK070040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G13, full
           insert sequence
          Length = 2057

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 407 ctcggcatcctccccgccat 426
           ||||||||||||||||||||
Sbjct: 614 ctcggcatcctccccgccat 633
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>gb|AY112569.1| Zea mays CL3104_1 mRNA sequence
          Length = 1317

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cggagcggagcggagcggca 123
            ||||||||||||||||||||
Sbjct: 1270 cggagcggagcggagcggca 1289
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>emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in linkage group 4,
              complete sequence
          Length = 171708

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 428    aattattttcttgcatttta 447
              ||||||||||||||||||||
Sbjct: 110141 aattattttcttgcatttta 110160
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>gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12 of 73 of the complete
             sequence
          Length = 226833

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   atcggagcggagcggagcgg 121
             ||||||||||||||||||||
Sbjct: 11706 atcggagcggagcggagcgg 11687
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>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete
             sequence
          Length = 291923

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   gagcggagcggagcggcagc 125
             ||||||||||||||||||||
Sbjct: 61449 gagcggagcggagcggcagc 61468
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>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete
             sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   ggagcggagcggagcggcag 124
             ||||||||||||||||||||
Sbjct: 99148 ggagcggagcggagcggcag 99167
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>gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, region 50A2-50A3, P1 clones
              DS08976 and DS01149, complete sequence
          Length = 129605

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    gagcggagcggagcggcagc 125
              ||||||||||||||||||||
Sbjct: 102305 gagcggagcggagcggcagc 102324
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>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds;
             chivosazol biosynthetic gene cluster, complete sequence;
             and hypothetical protein gene, complete cds
          Length = 96547

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   cggagcggcagctcctccctcccc 137
             ||||||||||||||||| ||||||
Sbjct: 58155 cggagcggcagctcctcgctcccc 58132
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>dbj|AP001687.1| Homo sapiens genomic DNA, chromosome 21q, section 31/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 426    tcaattattttcttgcattt 445
              ||||||||||||||||||||
Sbjct: 175352 tcaattattttcttgcattt 175333
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>gb|AC005473.1|AC005473 Drosophila melanogaster, chromosome 2R, region 44A3-44A4, P1 clone
             DS02142, complete sequence
          Length = 76743

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   atcggagcggagcggagcgg 121
             ||||||||||||||||||||
Sbjct: 57218 atcggagcggagcggagcgg 57237
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>dbj|AP000459.4| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-42M17, complete
             sequence
          Length = 171863

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   tcaattattttcttgcattt 445
             ||||||||||||||||||||
Sbjct: 64271 tcaattattttcttgcattt 64252
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 407      ctcggcatcctccccgccat 426
                ||||||||||||||||||||
Sbjct: 20909993 ctcggcatcctccccgccat 20910012
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>emb|AL672299.14| Mouse DNA sequence from clone RP23-287A19 on chromosome X, complete
             sequence
          Length = 131629

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   ttttcttgcattttagtgtg 452
             ||||||||||||||||||||
Sbjct: 85116 ttttcttgcattttagtgtg 85135
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>emb|AL133222.2|HS69P17 Homo sapiens chromosome 21 BAC RPCIP704P1769, complete sequence
          Length = 102619

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  tcaattattttcttgcattt 445
            ||||||||||||||||||||
Sbjct: 9390 tcaattattttcttgcattt 9409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,892,178
Number of Sequences: 3902068
Number of extensions: 4892178
Number of successful extensions: 103302
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102959
Number of HSP's gapped (non-prelim): 342
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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