>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis|
           thaliana envelope membrane integrase) (Ath4)
           (ALBINO3-like protein 1)
          Length = 1013

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = +3

Query: 276 LSIDCGGSGNYTDARGLRWTSDAGIIAXXXXXXXXXXXXXXKQKEDTQYTTLRAFPADGA 455
           +SIDCG S ++ DA    W  D   +A                K   + TTLR FP  G 
Sbjct: 29  ISIDCGSSSSHIDADNRTWVGDTDFVATGLTSKFVPF-----SKFPAELTTLRYFPT-GE 82

Query: 456 KHCYA-LPVATRARYL 500
            +CY  +PV    + L
Sbjct: 83  TNCYTNIPVEKGGKVL 98

>MUC1_HUMAN (P15941) Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin)|
            (PEM) (PEMT) (Episialin) (Tumor-associated mucin)
            (Carcinoma-associated mucin) (Tumor-associated epithelial
            membrane antigen) (EMA) (H23AG) (Peanut-reactive urinary
            mucin) (PUM)
          Length = 1255

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +3

Query: 48   PSNHSDRATTGLLRHSMEMEQSSRPASTPPTQHRSSCSAYLRLAVLYAFFFL 203
            PS+HSD  TT L  HS + + SS   S+ P    S+ S   +L+   +FFFL
Sbjct: 995  PSHHSDTPTT-LASHSTKTDASSTHHSSVPPLTSSNHSTSPQLSTGVSFFFL 1045

>SRTX_ATREN (P13208) Sarafotoxins precursor [Contains: Sarafotoxin A,|
           Ser-isoform (Sarafotoxin A) (S6A) (SRTX-A); Sarafotoxin
           C (S6C) (SRTX-C); Sarafotoxin B (S6B) (SRTX-B);
           Sarafotoxin E (S6E) (SRTX-E); Sarafotoxin A,
           Thr-isoform]
          Length = 543

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1

Query: 88  GIPWRWSRAAGRLPLPQRNTDPL 156
           GI WR ++ A R P PQRN +PL
Sbjct: 287 GIIWRDTKQAARDPSPQRNVEPL 309

>FAS_RAT (P12785) Fatty acid synthase (EC 2.3.1.85) [Includes:|
            [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38);
            [Acyl-carrier-protein] S-malonyltransferase (EC
            2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC
            2.3.1.41); 3-oxoacyl-[acyl-ca
          Length = 2505

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 186  KAQQDVNKQSKRIGVALGEWKPAGCSAPSPWNAGAVQ*SPC 64
            +A +DV  + ++  VA G+W P+G   P+P N GA+    C
Sbjct: 1273 QALKDVQTKLQQHDVAQGQWDPSG---PAPTNLGALDLVVC 1310

>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein|
           kinase precursor (FLG22-induced receptor-like kinase 1)
          Length = 876

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = +3

Query: 270 GFLSIDCG--GSGNYTD-ARGLRWTSDAGIIAXXXXXXXXXXXXXXKQKEDTQYTTLRAF 440
           GF+SIDCG     +Y D   G+++ SD+  +                   D     +R+F
Sbjct: 29  GFISIDCGIPDDSSYNDETTGIKYVSDSAFV--DSGTTKRIAAQFQSSGFDRHLLNVRSF 86

Query: 441 PADGAKHCYALP 476
           P    + CY +P
Sbjct: 87  P-QSKRSCYDVP 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,740,938
Number of Sequences: 219361
Number of extensions: 793163
Number of successful extensions: 2214
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2214
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)