ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl20a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7 32 0.77
2FXL21_MOUSE (Q8BFZ4) F-box/LRR-repeat protein 21 (F-box and leuc... 31 1.7
3FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leuc... 30 2.9
4FXL21_HUMAN (Q9UKT6) F-box/LRR-repeat protein 21 (F-box and leuc... 30 3.8
5FBX33_HUMAN (Q7Z6M2) F-box only protein 33 30 3.8
6SO1C1_RAT (Q9EPZ7) Solute carrier organic anion transporter fami... 30 3.8
7POF10_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding... 30 3.8
8SO1C1_MOUSE (Q9ERB5) Solute carrier organic anion transporter fa... 30 3.8
9DIA2_ASHGO (Q75A03) Protein DIA2 29 6.5
10FXL12_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and leuc... 29 6.5
11UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein (F-box only pro... 29 6.5
12LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-bind... 29 6.5
13FBSP1_CAEEL (Q18223) F-box/SPRY-domain protein 1 (F-box synaptic... 29 6.5
14SY121_ARATH (Q9ZSD4) Syntaxin-121 (AtSYP121) (Syntaxin-related p... 29 8.5
15MET30_YEAST (P39014) F-box protein MET30 (Methionine requiring p... 29 8.5
16TPS3_YEAST (P38426) Trehalose synthase complex regulatory subuni... 29 8.5

>YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7|
          Length = 466

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +2

Query: 284 LPYEMIIEVMQWLPVKSVFRFKAVCRSWAAL-LSSDEFRRLHM 409
           LP E++++V  +L  K++ R   VCRSW+ L L    ++R+ +
Sbjct: 60  LPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDL 102



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>FXL21_MOUSE (Q8BFZ4) F-box/LRR-repeat protein 21 (F-box and leucine-rich repeat|
           protein 21) (F-box/LRR-repeat protein 3B) (F-box and
           leucine-rich repeat protein 3B)
          Length = 434

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +2

Query: 281 SLPYEMIIEVMQWLPVKSVFRFKAVCRSW 367
           +LP+ +I+++ Q+LP+    R  +VCR W
Sbjct: 44  TLPHHVILQIFQYLPLIDRARASSVCRRW 72



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>FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat|
           protein 12) (F-box protein FBL12)
          Length = 326

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 284 LPYEMIIEVMQWLPVKSVFRFKAVCRSWAALL 379
           LP  +++E+  +LPV+   R   VC  W  L+
Sbjct: 7   LPDSVLLEIFSYLPVRDRIRISRVCHRWKRLV 38



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>FXL21_HUMAN (Q9UKT6) F-box/LRR-repeat protein 21 (F-box and leucine-rich repeat|
           protein 21) (F-box/LRR-repeat protein 3B) (F-box and
           leucine-rich repeat protein 3B)
          Length = 434

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 248 HMATARDDCGASLPYEMIIEVMQWLPVKSVFRFKAVCRSW 367
           H  T   D G SLP+ +++++ Q+LP+       +VCR W
Sbjct: 34  HTHTVLLDWG-SLPHHVVLQIFQYLPLLDRACASSVCRRW 72



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>FBX33_HUMAN (Q7Z6M2) F-box only protein 33|
          Length = 555

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 278 ASLPYEMIIEVMQWLPVKSVFRFKAVCRSWAALL 379
           ASLP E+I+ +  +LP     R  A C  W   L
Sbjct: 69  ASLPSELIVHIFSFLPAPDRLRASASCSHWRECL 102



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>SO1C1_RAT (Q9EPZ7) Solute carrier organic anion transporter family member 1C1|
           (Solute carrier family 21 member 14) (Blood-brain
           barrier-specific anion transporter 1) (BBB-specific
           anion transporter type 1)
          Length = 716

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 494 PQWSRMWWSVRCIAAWLVVHAALQPWLLP 408
           PQW   WW    IA +L + AA+  W LP
Sbjct: 271 PQWVGAWWLGYLIAGFLSLLAAVPFWCLP 299



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>POF10_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding protein 2)|
          Length = 662

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +2

Query: 245 EHMATARDDCGASLPYEMIIEVMQWLPVKSVFRFKAVCRSWAALLSSD 388
           +H +   +    +LP E++I +  +L  +S+   +  C+ W  LLS D
Sbjct: 21  DHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDD 68



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>SO1C1_MOUSE (Q9ERB5) Solute carrier organic anion transporter family member 1C1|
           (Solute carrier family 21 member 14) (Organic anion
           transporter F) (OATP-F) (Organic anion-transporting
           polypeptide 14) (Organic anion transporter 2) (OATP2)
          Length = 715

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 494 PQWSRMWWSVRCIAAWLVVHAALQPWLLP 408
           PQW   WW    IA +L + AA+  W LP
Sbjct: 271 PQWVGAWWLGYLIAGFLSLLAAVPFWCLP 299



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>DIA2_ASHGO (Q75A03) Protein DIA2|
          Length = 685

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 260 ARDDCGASLPYEMIIEVMQWLPVKSVFRFKAVCRSW 367
           A+ D  A+LP E+I  +M  +  +S+ R  +VC+ W
Sbjct: 205 AKIDYIATLPVEIIERIMANMDTRSIIRCYSVCKLW 240



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>FXL12_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat|
           protein 12) (F-box protein FBL12)
          Length = 326

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 284 LPYEMIIEVMQWLPVKSVFRFKAVCRSWAALL 379
           LP  +++E+  +LPV+   R   VC  W  L+
Sbjct: 7   LPDLVLLEIFSYLPVRDRIRISRVCHRWKRLV 38



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>UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein (F-box only protein 1)|
           (AtFBX1)
          Length = 442

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +2

Query: 278 ASLPYEMIIEVMQWLPVKSVFRFKAVCRSWAALLSSDEFRRLHM 409
           + LP  ++  V+ +LP  + FR + VC+ + +LL S+ F   ++
Sbjct: 48  SKLPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYL 91



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>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1842

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +2

Query: 20  KNESFPATRRPAPRRSLADSPPSLR 94
           + E  P   RPAPRRS A+ PPSLR
Sbjct: 218 EEEFDPQNSRPAPRRS-AEGPPSLR 241



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>FBSP1_CAEEL (Q18223) F-box/SPRY-domain protein 1 (F-box synaptic protein 1)|
          Length = 332

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 263 RDDCGAS-LPYEMIIEVMQWLPVKSVFRFKAVCRSWAALLSSDE 391
           R +  AS LP +++ ++ Q+LP+K +      C SW   LS ++
Sbjct: 77  RPEVSASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMED 120



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>SY121_ARATH (Q9ZSD4) Syntaxin-121 (AtSYP121) (Syntaxin-related protein At-Syr1)|
          Length = 346

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = -1

Query: 491 QWSRMWWSVRCIAAWLVVHAALQPWLLPC----GGGGIHRRRAAQPRSGKPP 348
           +W+ +   +  I   +VV A L+PW        GGGG      +QP SG PP
Sbjct: 285 KWTCIAIIILIIIITVVVLAVLKPWNNSSGGGGGGGGGGTTGGSQPNSGTPP 336



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>MET30_YEAST (P39014) F-box protein MET30 (Methionine requiring protein 30) (E3|
           ubiquitin ligase complex SCF(Met30) subunit MET30)
          Length = 640

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 284 LPYEMIIEVMQWLPVKSVFRFKAVCRSWAALLSSD 388
           LP E+ ++++ +L  +S+     VCR W  L   D
Sbjct: 187 LPQELSLKILSYLDCQSLCNATRVCRKWQKLADDD 221



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>TPS3_YEAST (P38426) Trehalose synthase complex regulatory subunit TPS3|
           (Alpha,alpha-trehalose-phosphate synthase [UDP-forming]
           115 kDa subunit)
          Length = 1054

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 315 SGSQSNPSSVSRRFAAPGLR-CSPPMNSAASTWQQPRLQSGVHH 443
           SGS +   SV   F+AP  R CSP   ++AS+    R  S  HH
Sbjct: 126 SGSTAQRPSVEEFFSAPSARVCSPSQEASASSISASR--SSAHH 167


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,228,219
Number of Sequences: 219361
Number of extensions: 1319895
Number of successful extensions: 4018
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4011
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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