Clone Name | bastl20a08 |
---|---|
Clone Library Name | barley_pub |
>YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7| Length = 466 Score = 32.3 bits (72), Expect = 0.77 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +2 Query: 284 LPYEMIIEVMQWLPVKSVFRFKAVCRSWAAL-LSSDEFRRLHM 409 LP E++++V +L K++ R VCRSW+ L L ++R+ + Sbjct: 60 LPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDL 102
>FXL21_MOUSE (Q8BFZ4) F-box/LRR-repeat protein 21 (F-box and leucine-rich repeat| protein 21) (F-box/LRR-repeat protein 3B) (F-box and leucine-rich repeat protein 3B) Length = 434 Score = 31.2 bits (69), Expect = 1.7 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +2 Query: 281 SLPYEMIIEVMQWLPVKSVFRFKAVCRSW 367 +LP+ +I+++ Q+LP+ R +VCR W Sbjct: 44 TLPHHVILQIFQYLPLIDRARASSVCRRW 72
>FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat| protein 12) (F-box protein FBL12) Length = 326 Score = 30.4 bits (67), Expect = 2.9 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 284 LPYEMIIEVMQWLPVKSVFRFKAVCRSWAALL 379 LP +++E+ +LPV+ R VC W L+ Sbjct: 7 LPDSVLLEIFSYLPVRDRIRISRVCHRWKRLV 38
>FXL21_HUMAN (Q9UKT6) F-box/LRR-repeat protein 21 (F-box and leucine-rich repeat| protein 21) (F-box/LRR-repeat protein 3B) (F-box and leucine-rich repeat protein 3B) Length = 434 Score = 30.0 bits (66), Expect = 3.8 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +2 Query: 248 HMATARDDCGASLPYEMIIEVMQWLPVKSVFRFKAVCRSW 367 H T D G SLP+ +++++ Q+LP+ +VCR W Sbjct: 34 HTHTVLLDWG-SLPHHVVLQIFQYLPLLDRACASSVCRRW 72
>FBX33_HUMAN (Q7Z6M2) F-box only protein 33| Length = 555 Score = 30.0 bits (66), Expect = 3.8 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +2 Query: 278 ASLPYEMIIEVMQWLPVKSVFRFKAVCRSWAALL 379 ASLP E+I+ + +LP R A C W L Sbjct: 69 ASLPSELIVHIFSFLPAPDRLRASASCSHWRECL 102
>SO1C1_RAT (Q9EPZ7) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Blood-brain barrier-specific anion transporter 1) (BBB-specific anion transporter type 1) Length = 716 Score = 30.0 bits (66), Expect = 3.8 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 494 PQWSRMWWSVRCIAAWLVVHAALQPWLLP 408 PQW WW IA +L + AA+ W LP Sbjct: 271 PQWVGAWWLGYLIAGFLSLLAAVPFWCLP 299
>POF10_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding protein 2)| Length = 662 Score = 30.0 bits (66), Expect = 3.8 Identities = 13/48 (27%), Positives = 25/48 (52%) Frame = +2 Query: 245 EHMATARDDCGASLPYEMIIEVMQWLPVKSVFRFKAVCRSWAALLSSD 388 +H + + +LP E++I + +L +S+ + C+ W LLS D Sbjct: 21 DHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDD 68
>SO1C1_MOUSE (Q9ERB5) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Organic anion transporter F) (OATP-F) (Organic anion-transporting polypeptide 14) (Organic anion transporter 2) (OATP2) Length = 715 Score = 30.0 bits (66), Expect = 3.8 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 494 PQWSRMWWSVRCIAAWLVVHAALQPWLLP 408 PQW WW IA +L + AA+ W LP Sbjct: 271 PQWVGAWWLGYLIAGFLSLLAAVPFWCLP 299
>DIA2_ASHGO (Q75A03) Protein DIA2| Length = 685 Score = 29.3 bits (64), Expect = 6.5 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +2 Query: 260 ARDDCGASLPYEMIIEVMQWLPVKSVFRFKAVCRSW 367 A+ D A+LP E+I +M + +S+ R +VC+ W Sbjct: 205 AKIDYIATLPVEIIERIMANMDTRSIIRCYSVCKLW 240
>FXL12_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat| protein 12) (F-box protein FBL12) Length = 326 Score = 29.3 bits (64), Expect = 6.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 284 LPYEMIIEVMQWLPVKSVFRFKAVCRSWAALL 379 LP +++E+ +LPV+ R VC W L+ Sbjct: 7 LPDLVLLEIFSYLPVRDRIRISRVCHRWKRLV 38
>UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein (F-box only protein 1)| (AtFBX1) Length = 442 Score = 29.3 bits (64), Expect = 6.5 Identities = 13/44 (29%), Positives = 26/44 (59%) Frame = +2 Query: 278 ASLPYEMIIEVMQWLPVKSVFRFKAVCRSWAALLSSDEFRRLHM 409 + LP ++ V+ +LP + FR + VC+ + +LL S+ F ++ Sbjct: 48 SKLPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYL 91
>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1842 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +2 Query: 20 KNESFPATRRPAPRRSLADSPPSLR 94 + E P RPAPRRS A+ PPSLR Sbjct: 218 EEEFDPQNSRPAPRRS-AEGPPSLR 241
>FBSP1_CAEEL (Q18223) F-box/SPRY-domain protein 1 (F-box synaptic protein 1)| Length = 332 Score = 29.3 bits (64), Expect = 6.5 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +2 Query: 263 RDDCGAS-LPYEMIIEVMQWLPVKSVFRFKAVCRSWAALLSSDE 391 R + AS LP +++ ++ Q+LP+K + C SW LS ++ Sbjct: 77 RPEVSASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMED 120
>SY121_ARATH (Q9ZSD4) Syntaxin-121 (AtSYP121) (Syntaxin-related protein At-Syr1)| Length = 346 Score = 28.9 bits (63), Expect = 8.5 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = -1 Query: 491 QWSRMWWSVRCIAAWLVVHAALQPWLLPC----GGGGIHRRRAAQPRSGKPP 348 +W+ + + I +VV A L+PW GGGG +QP SG PP Sbjct: 285 KWTCIAIIILIIIITVVVLAVLKPWNNSSGGGGGGGGGGTTGGSQPNSGTPP 336
>MET30_YEAST (P39014) F-box protein MET30 (Methionine requiring protein 30) (E3| ubiquitin ligase complex SCF(Met30) subunit MET30) Length = 640 Score = 28.9 bits (63), Expect = 8.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +2 Query: 284 LPYEMIIEVMQWLPVKSVFRFKAVCRSWAALLSSD 388 LP E+ ++++ +L +S+ VCR W L D Sbjct: 187 LPQELSLKILSYLDCQSLCNATRVCRKWQKLADDD 221
>TPS3_YEAST (P38426) Trehalose synthase complex regulatory subunit TPS3| (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 115 kDa subunit) Length = 1054 Score = 28.9 bits (63), Expect = 8.5 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +3 Query: 315 SGSQSNPSSVSRRFAAPGLR-CSPPMNSAASTWQQPRLQSGVHH 443 SGS + SV F+AP R CSP ++AS+ R S HH Sbjct: 126 SGSTAQRPSVEEFFSAPSARVCSPSQEASASSISASR--SSAHH 167 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,228,219 Number of Sequences: 219361 Number of extensions: 1319895 Number of successful extensions: 4018 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3831 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4011 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)