>CH60_DESPS (Q6ARV6) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 518

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 135 QLIAAGGNPNQAKKNLGCAAERGLAEARSRGSPLFSQTTYASL 7
           +L+AAGGNP + K+ +    E  +AE R+  +P   Q   A +
Sbjct: 105 KLVAAGGNPMEIKRGIDKGVEAVIAELRNIATPTKEQKEIAQV 147

>CH601_COREF (Q8CY27) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 537

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -3

Query: 129 IAAGGNPNQAKKNLGCAAERGLAEARSRGSPLFSQTTYASL 7
           +AAG NP +  K +  A ++ L E R+R +P+ +    AS+
Sbjct: 106 VAAGANPIELNKGIEAATQKTLDELRARATPISAPQEVASV 146

>CH601_CORGL (Q8NSS0) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 538

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 129 IAAGGNPNQAKKNLGCAAERGLAEARSRGS 40
           +AAG NP +  K +  AAE+ L E ++R +
Sbjct: 106 VAAGANPMELNKGISAAAEKTLEELKARAT 135

>SLU7_EMENI (Q5B3U2) Pre-mRNA-splicing factor slu7 (Splicing factor sluA)|
          Length = 466

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = -1

Query: 314 PGAAEEVDEGT*EDEWXXXXXXXXXXXASLGFLEGDGAEEGKEGRRRWSAETRLRLSVRA 135
           P     VD G  ED+            +S     GD AE  +  R  W A+ R    +  
Sbjct: 210 PKTRRMVDMGAAEDQAAALVAEENFVRSS-----GDAAEFERAQRYAWEAQERGTQKIHL 264

Query: 134 NSSPPAETLTRRKKI 90
            ++P +  +TR+K++
Sbjct: 265 QANPTSGEITRKKEL 279

>ATX1_MOUSE (P54254) Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog)|
          Length = 792

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 125 PPAETLTRRKKIWGAQQSVALPKRGAGDPLFFPKPRM 15
           P   T TR+++ W A ++  L K     PL  PKP +
Sbjct: 739 PSKPTATRKRRRWSAPETRKLEKSEDEPPLTLPKPSL 775

>ATX1_HUMAN (P54253) Ataxin-1 (Spinocerebellar ataxia type 1 protein)|
          Length = 816

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/70 (24%), Positives = 28/70 (40%)
 Frame = -1

Query: 224 GFLEGDGAEEGKEGRRRWSAETRLRLSVRANSSPPAETLTRRKKIWGAQQSVALPKRGAG 45
           G  +G      + G  ++  +  L  +       P++    RK+ W A +S  L K    
Sbjct: 730 GINQGSAQMLSENGELKFPEKMGLPAAPFLTKIEPSKPAATRKRRWSAPESRKLEKSEDE 789

Query: 44  DPLFFPKPRM 15
            PL  PKP +
Sbjct: 790 PPLTLPKPSL 799


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,098,239
Number of Sequences: 219361
Number of extensions: 590642
Number of successful extensions: 2153
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2153
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)