ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl19h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474307.1| Oryza sativa (japonica cultivar-group), predic... 147 3e-32
2dbj|AK071455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 3e-32
3emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 137 3e-29
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
5emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 137 3e-29
6emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 137 3e-29
7dbj|AB071298.1| Oryza sativa OsARF8 mRNA for auxin response fact... 135 1e-28
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
9dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
10dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
11ref|XM_464101.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
12dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
13dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
14dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
15dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
16dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
17dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
18dbj|AB071296.1| Oryza sativa OsARF7a mRNA for auxin response fac... 58 2e-05
19ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predic... 50 0.006
20dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
21dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
22dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
23dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response fact... 50 0.006
24ref|NM_191956.1| Oryza sativa (japonica cultivar-group), predic... 46 0.092
25gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.092
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
27dbj|AP003706.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
28dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
29dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
30dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.092
31dbj|AK100322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.092
32dbj|AB071299.1| Oryza sativa OsARF10 mRNA for auxin response fac... 46 0.092
33dbj|AB071291.1| Oryza sativa OsETTIN2 mRNA for Arabidopsis ETTIN... 46 0.092
34dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN... 46 0.092
35ref|XM_474238.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
36emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
37dbj|AK103452.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
38dbj|AK103105.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
39dbj|AB071292.1| Oryza sativa OsMP mRNA for Arabidopsis Monoptero... 42 1.4
40gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.7
41emb|AL035666.7|HS730D4 Human DNA sequence from clone RP4-730D4 o... 40 5.7
42gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.7
43dbj|AK070994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7 
>ref|XM_474307.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2457

 Score =  147 bits (74), Expect = 3e-32
 Identities = 86/90 (95%)
 Strand = Plus / Plus

                                                                       
Query: 334 gaggaagagaagaagagcctcaactcggagctgtggcacgcctgcgccggcccgctcgtc 393
           ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 64  gaggaagagaagaagtgcctcaactcggagctatggcacgcctgcgccggcccgctcgtc 123

                                         
Query: 394 tgccttcccaccctcggcacgcgcgtcgtc 423
           ||||| |||||| |||||||||||||||||
Sbjct: 124 tgcctccccaccgtcggcacgcgcgtcgtc 153
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>dbj|AK071455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093B04, full
           insert sequence
          Length = 3262

 Score =  147 bits (74), Expect = 3e-32
 Identities = 86/90 (95%)
 Strand = Plus / Plus

                                                                       
Query: 334 gaggaagagaagaagagcctcaactcggagctgtggcacgcctgcgccggcccgctcgtc 393
           ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 399 gaggaagagaagaagtgcctcaactcggagctatggcacgcctgcgccggcccgctcgtc 458

                                         
Query: 394 tgccttcccaccctcggcacgcgcgtcgtc 423
           ||||| |||||| |||||||||||||||||
Sbjct: 459 tgcctccccaccgtcggcacgcgcgtcgtc 488
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>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
             complete sequence
          Length = 159894

 Score =  137 bits (69), Expect = 3e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                         
Query: 339   agagaagaagagcctcaactcggagctgtggcacgcctgcgccggcccgctcgtctgcct 398
             |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 43441 agagaagaagtgcctcaactcggagctatggcacgcctgcgccggcccgctcgtctgcct 43382

                                      
Query: 399   tcccaccctcggcacgcgcgtcgtc 423
              |||||| |||||||||||||||||
Sbjct: 43381 ccccaccgtcggcacgcgcgtcgtc 43357
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  137 bits (69), Expect = 3e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                            
Query: 339      agagaagaagagcctcaactcggagctgtggcacgcctgcgccggcccgctcgtctgcct 398
                |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 34319038 agagaagaagtgcctcaactcggagctatggcacgcctgcgccggcccgctcgtctgcct 34318979

                                         
Query: 399      tcccaccctcggcacgcgcgtcgtc 423
                 |||||| |||||||||||||||||
Sbjct: 34318978 ccccaccgtcggcacgcgcgtcgtc 34318954



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 353      tcaactcggagctgtggcacgcctgcgccggcccgct 389
                ||||||||||||| |||||||| || ||||| |||||
Sbjct: 33926799 tcaactcggagctctggcacgcttgtgccgggccgct 33926763
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>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete
             sequence
          Length = 95419

 Score =  137 bits (69), Expect = 3e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                         
Query: 339   agagaagaagagcctcaactcggagctgtggcacgcctgcgccggcccgctcgtctgcct 398
             |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 91329 agagaagaagtgcctcaactcggagctatggcacgcctgcgccggcccgctcgtctgcct 91270

                                      
Query: 399   tcccaccctcggcacgcgcgtcgtc 423
              |||||| |||||||||||||||||
Sbjct: 91269 ccccaccgtcggcacgcgcgtcgtc 91245
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>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete
            sequence
          Length = 100419

 Score =  137 bits (69), Expect = 3e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                        
Query: 339  agagaagaagagcctcaactcggagctgtggcacgcctgcgccggcccgctcgtctgcct 398
            |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4194 agagaagaagtgcctcaactcggagctatggcacgcctgcgccggcccgctcgtctgcct 4135

                                     
Query: 399  tcccaccctcggcacgcgcgtcgtc 423
             |||||| |||||||||||||||||
Sbjct: 4134 ccccaccgtcggcacgcgcgtcgtc 4110
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>dbj|AB071298.1| Oryza sativa OsARF8 mRNA for auxin response factor 8, partial cds
          Length = 2388

 Score =  135 bits (68), Expect = 1e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                       
Query: 340 gagaagaagagcctcaactcggagctgtggcacgcctgcgccggcccgctcgtctgcctt 399
           ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 1   gagaagaagtgcctcaactcggagctatggcacgcctgcgccggcccgctcgtctgcctc 60

                                   
Query: 400 cccaccctcggcacgcgcgtcgtc 423
           |||||| |||||||||||||||||
Sbjct: 61  cccaccgtcggcacgcgcgtcgtc 84
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                            
Query: 344      agaagagcctcaactcggagctgtggcacgcctgcgccggcccgctcgtctgccttccca 403
                ||||| ||||||||| |||||| |||||||||||| || |||||||||||||||| ||| 
Sbjct: 28541912 agaagtgcctcaacttggagctctggcacgcctgctccagcccgctcgtctgcctcccct 28541971

                                    
Query: 404      ccctcggcacgcgcgtcgtc 423
                || |||||||||||||||||
Sbjct: 28541972 ccgtcggcacgcgcgtcgtc 28541991



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                       
Query: 353     tcaactcggagctgtggcacgcctgcgccggcccgctcgt 392
               |||||||||||||||||||||| |||||||||||||||||
Sbjct: 2214445 tcaactcggagctgtggcacgcgtgcgccggcccgctcgt 2214406
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>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:B1053A04
          Length = 144321

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                        
Query: 344  agaagagcctcaactcggagctgtggcacgcctgcgccggcccgctcgtctgccttccca 403
            ||||| ||||||||| |||||| |||||||||||| || |||||||||||||||| ||| 
Sbjct: 5925 agaagtgcctcaacttggagctctggcacgcctgctccagcccgctcgtctgcctcccct 5984

                                
Query: 404  ccctcggcacgcgcgtcgtc 423
            || |||||||||||||||||
Sbjct: 5985 ccgtcggcacgcgcgtcgtc 6004
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>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0017H11
          Length = 158374

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                          
Query: 344    agaagagcctcaactcggagctgtggcacgcctgcgccggcccgctcgtctgccttccca 403
              ||||| ||||||||| |||||| |||||||||||| || |||||||||||||||| ||| 
Sbjct: 110753 agaagtgcctcaacttggagctctggcacgcctgctccagcccgctcgtctgcctcccct 110812

                                  
Query: 404    ccctcggcacgcgcgtcgtc 423
              || |||||||||||||||||
Sbjct: 110813 ccgtcggcacgcgcgtcgtc 110832
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>ref|XM_464101.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3420

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                   
Query: 353 tcaactcggagctgtggcacgcctgcgccggcccgctcgt 392
           |||||||||||||||||||||| |||||||||||||||||
Sbjct: 113 tcaactcggagctgtggcacgcgtgcgccggcccgctcgt 152
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>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1123_E07
          Length = 113187

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                    
Query: 353  tcaactcggagctgtggcacgcctgcgccggcccgctcgt 392
            |||||||||||||||||||||| |||||||||||||||||
Sbjct: 1394 tcaactcggagctgtggcacgcgtgcgccggcccgctcgt 1355
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>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1679_B08
          Length = 142529

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                      
Query: 353    tcaactcggagctgtggcacgcctgcgccggcccgctcgt 392
              |||||||||||||||||||||| |||||||||||||||||
Sbjct: 129138 tcaactcggagctgtggcacgcgtgcgccggcccgctcgt 129099
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                     
Query: 353      tcaactcggagctgtggcacgcctgcgccggcccgct 389
                |||||||||||||||||||||||||||| || |||||
Sbjct: 29142153 tcaactcggagctgtggcacgcctgcgcggggccgct 29142189



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 362      agctgtggcacgcctgcgccggc 384
                |||||||||||||||||||||||
Sbjct: 28203533 agctgtggcacgcctgcgccggc 28203555
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>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0596H10
          Length = 166570

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                   
Query: 353    tcaactcggagctgtggcacgcctgcgccggcccgct 389
              |||||||||||||||||||||||||||| || |||||
Sbjct: 157140 tcaactcggagctgtggcacgcctgcgcggggccgct 157176
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>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OJ1215_E11
          Length = 105301

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                 
Query: 353  tcaactcggagctgtggcacgcctgcgccggcccgct 389
            |||||||||||||||||||||||||||| || |||||
Sbjct: 9440 tcaactcggagctgtggcacgcctgcgcggggccgct 9476
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>dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G19, full
           insert sequence
          Length = 3550

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 353 tcaactcggagctgtggcacgcctgcgccggcccgct 389
           |||||||||||||||||||||||||||| || |||||
Sbjct: 451 tcaactcggagctgtggcacgcctgcgcggggccgct 487
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>dbj|AB071296.1| Oryza sativa OsARF7a mRNA for auxin response factor 7a, partial cds
          Length = 3372

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 353 tcaactcggagctgtggcacgcctgcgccggcccgct 389
           |||||||||||||||||||||||||||| || |||||
Sbjct: 26  tcaactcggagctgtggcacgcctgcgcggggccgct 62
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>ref|NM_189992.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2481

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 361 gagctgtggcacgcctgcgccggcccgctcgtc 393
           |||||||||||||||||||| || |||||||||
Sbjct: 55  gagctgtggcacgcctgcgcggggccgctcgtc 87
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 361      gagctgtggcacgcctgcgccggcccgctcgtc 393
                |||||||||||||||||||| || |||||||||
Sbjct: 40688413 gagctgtggcacgcctgcgcggggccgctcgtc 40688445



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 360      ggagctgtggcacgcctgcgccggccc 386
                ||||||||||||||||||||| |||||
Sbjct: 27500169 ggagctgtggcacgcctgcgctggccc 27500143
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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0093F16
          Length = 160925

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 361    gagctgtggcacgcctgcgccggcccgctcgtc 393
              |||||||||||||||||||| || |||||||||
Sbjct: 130391 gagctgtggcacgcctgcgcggggccgctcgtc 130423
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>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full
           insert sequence
          Length = 3151

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 361 gagctgtggcacgcctgcgccggcccgctcgtc 393
           |||||||||||||||||||| || |||||||||
Sbjct: 277 gagctgtggcacgcctgcgcggggccgctcgtc 309
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>dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds
          Length = 2376

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 361 gagctgtggcacgcctgcgccggcccgctcgtc 393
           |||||||||||||||||||| || |||||||||
Sbjct: 19  gagctgtggcacgcctgcgcggggccgctcgtc 51
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>ref|NM_191956.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2190

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 360 ggagctgtggcacgcctgcgccggccc 386
           ||||||||||||||||||||| |||||
Sbjct: 114 ggagctgtggcacgcctgcgctggccc 140
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>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0053D02, complete sequence
          Length = 157106

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 361   gagctgtggcacgcctgcgccgg 383
             |||||||||||||||||||||||
Sbjct: 44805 gagctgtggcacgcctgcgccgg 44827
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 361      gagctgtggcacgcctgcgccgg 383
                |||||||||||||||||||||||
Sbjct: 27814388 gagctgtggcacgcctgcgccgg 27814410
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>dbj|AP003706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1125_C04
          Length = 98476

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 360   ggagctgtggcacgcctgcgccggccc 386
             ||||||||||||||||||||| |||||
Sbjct: 20872 ggagctgtggcacgcctgcgctggccc 20846
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>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0623A10
          Length = 156517

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 362  agctgtggcacgcctgcgccggc 384
            |||||||||||||||||||||||
Sbjct: 1562 agctgtggcacgcctgcgccggc 1584
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>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0009H10
          Length = 175754

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 362    agctgtggcacgcctgcgccggc 384
              |||||||||||||||||||||||
Sbjct: 134439 agctgtggcacgcctgcgccggc 134461
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>dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E23, full
           insert sequence
          Length = 2712

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 361 gagctgtggcacgcctgcgccgg 383
           |||||||||||||||||||||||
Sbjct: 336 gagctgtggcacgcctgcgccgg 358
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>dbj|AK100322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079H12, full
           insert sequence
          Length = 3026

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 362 agctgtggcacgcctgcgccggc 384
           |||||||||||||||||||||||
Sbjct: 697 agctgtggcacgcctgcgccggc 719
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>dbj|AB071299.1| Oryza sativa OsARF10 mRNA for auxin response factor 10, partial cds
          Length = 2100

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 362 agctgtggcacgcctgcgccggc 384
           |||||||||||||||||||||||
Sbjct: 68  agctgtggcacgcctgcgccggc 90
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>dbj|AB071291.1| Oryza sativa OsETTIN2 mRNA for Arabidopsis ETTIN-like protein 2,
           complete cds
          Length = 2811

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 360 ggagctgtggcacgcctgcgccggccc 386
           ||||||||||||||||||||| |||||
Sbjct: 271 ggagctgtggcacgcctgcgctggccc 297
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>dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN-like protein 1,
           complete cds
          Length = 2622

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 361 gagctgtggcacgcctgcgccgg 383
           |||||||||||||||||||||||
Sbjct: 228 gagctgtggcacgcctgcgccgg 250
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>ref|XM_474238.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2865

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 353 tcaactcggagctgtggcacgcctgcgccggcccgct 389
           ||||||||||||| |||||||| || ||||| |||||
Sbjct: 107 tcaactcggagctctggcacgcttgtgccgggccgct 143
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>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
              complete sequence
          Length = 163448

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 353    tcaactcggagctgtggcacgcctgcgccggcccgct 389
              ||||||||||||| |||||||| || ||||| |||||
Sbjct: 138698 tcaactcggagctctggcacgcttgtgccgggccgct 138662
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>dbj|AK103452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129I11, full
           insert sequence
          Length = 3831

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 353 tcaactcggagctgtggcacgcctgcgccggcccgct 389
           ||||||||||||| |||||||| || ||||| |||||
Sbjct: 647 tcaactcggagctctggcacgcttgtgccgggccgct 683
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>dbj|AK103105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118O21, full
           insert sequence
          Length = 2602

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 353 tcaactcggagctgtggcacgcctgcgccggcccgct 389
           ||||||||||||| |||||||| || ||||| |||||
Sbjct: 500 tcaactcggagctctggcacgcttgtgccgggccgct 536
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>dbj|AB071292.1| Oryza sativa OsMP mRNA for Arabidopsis Monopteros-like protein,
           complete cds
          Length = 2868

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 353 tcaactcggagctgtggcacgcctgcgccggcccgct 389
           ||||||||||||| |||||||| || ||||| |||||
Sbjct: 107 tcaactcggagctctggcacgcttgtgccgggccgct 143
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    tggggtaccgccgggcggat 213
              ||||||||||||||||||||
Sbjct: 905364 tggggtaccgccgggcggat 905383
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>emb|AL035666.7|HS730D4 Human DNA sequence from clone RP4-730D4 on chromosome 20q12 Contains a
             pseudogene similar to part of ATP synthase, H+
             transporting, mitochondrial F1 complex, O subunit)
             (oligomycin sensitivity conferring protein) (ATP5O),
             complete sequence
          Length = 47334

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   aggaagagaagaagagcctc 354
             ||||||||||||||||||||
Sbjct: 24544 aggaagagaagaagagcctc 24563
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 375     ctgcgccggcccgctcgtctgccttcccaccc 406
               ||||||||||||||||| |||| | |||||||
Sbjct: 4377820 ctgcgccggcccgctcgactgcatgcccaccc 4377789
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>dbj|AK070994.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080H04, full
            insert sequence
          Length = 1740

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 337  gaagagaagaagagcctcaa 356
            ||||||||||||||||||||
Sbjct: 1111 gaagagaagaagagcctcaa 1092


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,108,676
Number of Sequences: 3902068
Number of extensions: 2108676
Number of successful extensions: 43458
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43143
Number of HSP's gapped (non-prelim): 315
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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