Clone Information

BLAST Search Result

Clone Name	bastl19h01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)	217	2e-56
2	RS3A_ARATH (Q42262) 40S ribosomal protein S3a	217	2e-56
3	RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific ...	213	2e-55
4	RS3A_HELAN (P49198) 40S ribosomal protein S3a	213	2e-55
5	RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)	208	5e-54
6	RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a	181	9e-46
7	RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformatio...	177	1e-44
8	RS3A_MOUSE (P97351) 40S ribosomal protein S3a	177	1e-44
9	RS3A_HUMAN (P61247) 40S ribosomal protein S3a	177	1e-44
10	RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a	177	1e-44
11	RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)	177	1e-44
12	RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a	177	1e-44
13	RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)	177	1e-44
14	RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformat...	176	2e-44
15	RS3A_XENTR (Q642T2) 40S ribosomal protein S3a	176	2e-44
16	RS3A_XENLA (Q801S3) 40S ribosomal protein S3a	176	2e-44
17	RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a	175	5e-44
18	RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a	175	5e-44
19	RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a	174	9e-44
20	RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a	174	1e-43
21	RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)	169	3e-42
22	RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich prote...	169	4e-42
23	RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)	168	8e-42
24	RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)	167	1e-41
25	RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)	166	3e-41
26	RS3A_CAEEL (P48154) 40S ribosomal protein S3a	160	2e-39
27	RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)	158	6e-39
28	RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)	155	4e-38
29	RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)	154	9e-38
30	RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae	68	1e-11
31	RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae	66	4e-11
32	RS3A_METTH (O27630) 30S ribosomal protein S3Ae	65	7e-11
33	RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae	65	1e-10
34	RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae	65	1e-10
35	RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae	64	2e-10
36	RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae	64	3e-10
37	RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae	63	5e-10
38	RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae	63	5e-10
39	RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae	62	8e-10
40	RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae	61	1e-09
41	RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae	60	2e-09
42	RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae	60	4e-09
43	RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae	59	5e-09
44	RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae	55	1e-07
45	RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae	51	2e-06
46	RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae	48	2e-05
47	RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae	44	2e-04
48	RS3A_NANEQ (Q74N14) 30S ribosomal protein S3Ae	31	1.6
49	MNR2_YEAST (P35724) Manganese resistance protein MNR2	30	2.7
50	LAT_HUMAN (O43561) Linker for activation of T-cells family membe...	30	3.5
51	HYSA_STAAU (Q59801) Hyaluronate lyase precursor (EC 4.2.2.1) (Hy...	30	3.5
52	SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sul...	30	3.5
53	RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF	30	4.5
54	LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-bind...	29	5.9
55	HEM0_BRARE (Q9YHT4) 5-aminolevulinate synthase, erythroid-specif...	29	7.7
56	IF5_YEAST (P38431) Eukaryotic translation initiation factor 5 (e...	29	7.7
57	FD4_DROME (P32028) Fork head domain protein FD4	29	7.7

>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 261

 Score =  217 bits (552), Expect = 2e-56
 Identities = 105/117 (89%), Positives = 109/117 (93%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF KK WYDIKAP +F  RN+GKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           YRKIRLRAEDVQG NVLTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD YMLR+
Sbjct: 80  YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRL 136

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>RS3A_ARATH (Q42262) 40S ribosomal protein S3a|
          Length = 261

 Score =  217 bits (552), Expect = 2e-56
 Identities = 106/118 (89%), Positives = 110/118 (93%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           AVDPF+KK WYD+KAP  FT+RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED 
Sbjct: 19  AVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDN 78

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           AYRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD Y LRM
Sbjct: 79  AYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRM 136

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>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein|
           BIS289)
          Length = 261

 Score =  213 bits (542), Expect = 2e-55
 Identities = 104/117 (88%), Positives = 107/117 (91%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF KK WYDIKAP  FT RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADL  DEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           YRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDNY LR+
Sbjct: 80  YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRL 136

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>RS3A_HELAN (P49198) 40S ribosomal protein S3a|
          Length = 259

 Score =  213 bits (542), Expect = 2e-55
 Identities = 103/118 (87%), Positives = 110/118 (93%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A DPF+KK WYDIKAP LF +RNVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQNDED 
Sbjct: 19  AADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDH 78

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +YRKIRLRAEDVQG NVLTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN+ LRM
Sbjct: 79  SYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRM 136

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>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 259

 Score =  208 bits (530), Expect = 5e-54
 Identities = 99/118 (83%), Positives = 109/118 (92%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A DPF KK WYDIKAP +F+ RNVGKTLV+RTQGTKIASEGL+HRVFE+SLADLQ DED 
Sbjct: 19  AADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDH 78

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           ++RKIRLRAED+QG NVLTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+Y LRM
Sbjct: 79  SFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRM 136

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>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a|
          Length = 247

 Score =  181 bits (459), Expect = 9e-46
 Identities = 90/117 (76%), Positives = 99/117 (84%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYDIKAP        G+    RT GTKIAS+GL  RVFEVSLADLQNDEDQA
Sbjct: 20  VDPFSKKDWYDIKAPPRSRRARSGRRC-HRTAGTKIASDGLNFRVFEVSLADLQNDEDQA 78

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RKI+LRAEDVQG NVLTNFWGMDFTTDKLRSLVRKWQ+LI+AHVDVKTTDNY +R+
Sbjct: 79  FRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRI 135

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>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector|
           protein) [Contains: 40S ribosomal protein S3b]
          Length = 263

 Score =  177 bits (449), Expect = 1e-44
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_MOUSE (P97351) 40S ribosomal protein S3a|
          Length = 263

 Score =  177 bits (449), Expect = 1e-44
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_HUMAN (P61247) 40S ribosomal protein S3a|
          Length = 263

 Score =  177 bits (449), Expect = 1e-44
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a|
          Length = 263

 Score =  177 bits (449), Expect = 1e-44
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)|
          Length = 263

 Score =  177 bits (449), Expect = 1e-44
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a|
          Length = 263

 Score =  177 bits (449), Expect = 1e-44
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)|
          Length = 260

 Score =  177 bits (449), Expect = 1e-44
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 18  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 76

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 77  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 133

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>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector|
           protein)
          Length = 265

 Score =  176 bits (447), Expect = 2e-44
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a|
          Length = 263

 Score =  176 bits (447), Expect = 2e-44
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a|
          Length = 263

 Score =  176 bits (447), Expect = 2e-44
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a|
          Length = 263

 Score =  175 bits (444), Expect = 5e-44
 Identities = 85/117 (72%), Positives = 99/117 (84%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK  VFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGHVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a|
          Length = 266

 Score =  175 bits (444), Expect = 5e-44
 Identities = 85/117 (72%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGT+IAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a|
          Length = 263

 Score =  174 bits (442), Expect = 9e-44
 Identities = 84/117 (71%), Positives = 99/117 (84%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N L NF GMD T DK+ S+V+KWQT+IEAH+DVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRL 136

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>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a|
          Length = 265

 Score =  174 bits (441), Expect = 1e-43
 Identities = 84/117 (71%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGT+IAS+GLK RV+EVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVYEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 136

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>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)|
          Length = 255

 Score =  169 bits (429), Expect = 3e-42
 Identities = 79/117 (67%), Positives = 101/117 (86%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFT+K W+DIKAP  F +RNVGKTL++R+ G K A++GLK RVFEV LADLQ  ED +
Sbjct: 20  VDPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHS 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           YRKI+LR ++VQG N+LTNF G+DFT+DKLRSLVRKWQ+L+EA+V VKT+D+Y+LR+
Sbjct: 80  YRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRV 136

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>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)|
          Length = 264

 Score =  169 bits (428), Expect = 4e-42
 Identities = 84/117 (71%), Positives = 99/117 (84%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFTKK+WYD+KAP +F  R +GKTLV+R+QGTKIAS+ LK RVFEVSLADLQNDE   
Sbjct: 21  VDPFTKKEWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDE-VT 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK +L AE+VQG NVLTNF GM  T DKL S+V+KWQTLIEA+VDVKTTD Y+LR+
Sbjct: 80  FRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRV 136

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>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)|
          Length = 254

 Score =  168 bits (425), Expect = 8e-42
 Identities = 80/117 (68%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFT+K+W+DIKAP  F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ  ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHS 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RKI+LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+
Sbjct: 80  FRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRI 136

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>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)|
          Length = 254

 Score =  167 bits (423), Expect = 1e-41
 Identities = 79/117 (67%), Positives = 100/117 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFT+K+W+DIKAP  F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ  ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHS 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK++LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+
Sbjct: 80  FRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRI 136

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>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)|
          Length = 268

 Score =  166 bits (420), Expect = 3e-41
 Identities = 83/119 (69%), Positives = 98/119 (82%), Gaps = 2/119 (1%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQN--DED 312
           VDPFT+K WYD+KAP +F +R  GKTLV+RTQGTKIAS+GLK RVFEVSLADLQN  D +
Sbjct: 21  VDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAE 80

Query: 313 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +++RK +L AE V G +VLTNF GM  TTDKLRS+V KWQTLIE  VDVKTTD +MLR+
Sbjct: 81  RSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRV 139

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>RS3A_CAEEL (P48154) 40S ribosomal protein S3a|
          Length = 256

 Score =  160 bits (404), Expect = 2e-39
 Identities = 81/118 (68%), Positives = 94/118 (79%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           AVDPF++K+WYDIKAP +F +R VGKTL++RTQGTKIASEGLK RVFEVSL DL N E  
Sbjct: 18  AVDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLNNSEAD 77

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            +RK +L AEDVQG NVLTNF  M  T DKL S+V+KW TLIEA+  VKTTD Y LR+
Sbjct: 78  -FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRV 134

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>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)|
          Length = 267

 Score =  158 bits (400), Expect = 6e-39
 Identities = 79/119 (66%), Positives = 96/119 (80%), Gaps = 2/119 (1%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED-- 312
           VDPF++K WYD+KAP +F +R +GKTLV+RTQG +IAS+ LK RVFEVSLADLQ D D  
Sbjct: 21  VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPE 80

Query: 313 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +++RK RL AEDVQ  NVL NF GMD TTDK RS+V+KWQTLIEA V+ KT D Y+LR+
Sbjct: 81  RSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 139

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>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)|
          Length = 251

 Score =  155 bits (393), Expect = 4e-38
 Identities = 73/117 (62%), Positives = 93/117 (79%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF++K+WYDIKAP  F  +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ A
Sbjct: 20  VDPFSRKEWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHA 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK++LR ED+QG + LT+F G+  T+DKLRSLVRKWQT IEA   +KTTD Y+ R+
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLCRV 136

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>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)|
          Length = 251

 Score =  154 bits (390), Expect = 9e-38
 Identities = 72/117 (61%), Positives = 93/117 (79%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF++K WYDIKAP  F  +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ +
Sbjct: 20  VDPFSRKDWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHS 79

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           +RK++LR ED+QG + LT+F G D T+DKLRSLVRKWQ+ IEA+  +KTTD Y+ R+
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRI 136

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>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae|
          Length = 203

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 39/117 (33%), Positives = 64/117 (54%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           +D +  K+WY+I+AP+      VG T+             L  R  E ++ +L ND  + 
Sbjct: 10  LDGWKSKEWYNIEAPVYLNRAIVGNTMAGDPSL-------LVGRNVETTVGELTNDMTKN 62

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
             K+ LR  +V G    T+  G + TTD +RS+V++  + I+A+VDVKT D Y++R+
Sbjct: 63  NTKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIRV 119

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>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 42/118 (35%), Positives = 58/118 (49%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +
Sbjct: 11  AKDKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVMNRVVEVTLKDITGDFTK 63

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            + K+  +  DV+G N  T F GM      +RSLVR+  T I+   ++ T D Y LR+
Sbjct: 64  GHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRV 121

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>RS3A_METTH (O27630) 30S ribosomal protein S3Ae|
          Length = 195

 Score = 65.5 bits (158), Expect = 7e-11
 Identities = 38/116 (32%), Positives = 63/116 (54%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D + +K+WY IK+P LF    +G T       ++     LK RV E ++ +L  D  + Y
Sbjct: 11  DTWKEKKWYVIKSPKLFGENEIGTT------PSRDPDFLLKRRV-EATMRELTGDFSKQY 63

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            K++ + + V G    T F G   TTD +RS++R+  + ++A V V+T D Y L++
Sbjct: 64  VKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKV 119

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>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 41/116 (35%), Positives = 58/116 (50%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +++
Sbjct: 11  DKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDVTGDFTKSH 63

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            K+  +  DV+G N  T F GM      +RSLVR+  T I+   ++ T D Y LR+
Sbjct: 64  VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRV 119

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>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 42/118 (35%), Positives = 58/118 (49%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +
Sbjct: 10  AKDKWKLKQWYVIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDITGDFLK 62

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            + K+  +  DV+G N  T F GM      +RSLVR+  T I+   ++ T D Y LR+
Sbjct: 63  GHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRV 120

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>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQND--EDQ 315
           D +T K+W+ + AP  F    +G+T       +K+       R  E +LA+L ND     
Sbjct: 12  DKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVVG-----RTVETTLAELTNDYSNQN 64

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            Y+K+  +   V G N  T FW  + T + L SL R+  + IE  VDV T D Y LR+
Sbjct: 65  TYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRV 122

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>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae|
          Length = 204

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 37/117 (31%), Positives = 63/117 (53%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           +D +  K+WY+I+AP       VG T+             L  R  E ++ +L ND  + 
Sbjct: 10  LDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSL-------LVGRNVETTVGELTNDMTKN 62

Query: 319 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
             K+ LR  +V G    T+  G + TTD +RS+V++  + I+A+VDV+T D +++R+
Sbjct: 63  NTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRV 119

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>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae|
          Length = 200

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 38/118 (32%), Positives = 57/118 (48%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A D +  K+WY + AP  F S+ +G T            E +  RV E +L DL  D  +
Sbjct: 13  AKDKWKMKEWYIVYAPDFFGSKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTK 65

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            + K+  +  DV+G N  T F G       +RSLVR+  T ++   ++ T D Y LR+
Sbjct: 66  GHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRV 123

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>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 36/116 (31%), Positives = 61/116 (52%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           DP+  K+W+ + AP       +G   ++     +  ++ L  R  EVSL D+  D     
Sbjct: 20  DPWALKKWFSVYAPSY-----LGGVFLAEVPANE--AQKLLMRTLEVSLYDITKDISHLP 72

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            K++ +   V+G+  LT F G++ T D +RSLVRK  + + A  +VKT D  ++R+
Sbjct: 73  IKLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRI 128

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>RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae|
          Length = 225

 Score = 62.0 bits (149), Expect = 8e-10
 Identities = 37/118 (31%), Positives = 64/118 (54%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A D +  K WYDI     +T ++ G  ++ +T     A+  L  R+ E+SL DL N+  +
Sbjct: 15  AKDTWKSKVWYDI-----YTPQSFGGDVIGQTPANDPAN--LIGRISEISLRDLTNEHSK 67

Query: 316 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
              ++  + + V G N  + F G D T + L+S VR+ ++ I A V+V+T D + +R+
Sbjct: 68  HMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRV 125

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>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae|
          Length = 213

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 34/112 (30%), Positives = 58/112 (51%)
 Frame = +1

Query: 154 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 333
           +K+WY ++AP  F    +GKT            + +  R  E +L +L ND  +   K+ 
Sbjct: 12  QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64

Query: 334 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            +  +V   +  T F   + T D LRSLVR+  + +EA++ V TTD+Y +++
Sbjct: 65  FKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQI 116

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>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae|
          Length = 193

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 40/116 (34%), Positives = 61/116 (52%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  K+W+ I AP  F     G+ ++  T     A++ L  +V E +L DL  D    Y
Sbjct: 9   DKWKLKKWFTIVAPKTF-----GEVVLGTTPAFD-ANQALNRKV-ETTLYDLTGDYSLVY 61

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
             +  R   V+G  +LT F G + + D +RSLVR+  + I+A  DV T D Y+LR+
Sbjct: 62  VHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRV 117

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>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 38/116 (32%), Positives = 58/116 (50%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  K WY I AP +F +  VG+T            E +  RV E +L D+ +D  + +
Sbjct: 4   DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            K+  R  DV+G    + F G     D +RSLVR+  + I+  +DV T D Y +R+
Sbjct: 57  IKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRV 112

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>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae|
          Length = 197

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  K+WY I AP +F     G+ L+  T    I ++ L  ++ EV+L DL  D +  Y
Sbjct: 11  DKWKLKKWYVITAPKVF-----GEALLGSTPAYDI-NKALSRKI-EVTLYDLTGDYNLVY 63

Query: 322 RKIRLRA-EDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
             +  +   ++ G  + T F+G + + D +RSLVR+  + I A VDV T D YMLR+
Sbjct: 64  IHLYFKILGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRV 120

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>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae|
          Length = 208

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTL---VSRTQGTKIASEGLKHRVFEVSLADLQNDED 312
           D +  K+WY +  P  F   ++G T    +++T G ++          E +L DL  D  
Sbjct: 10  DKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRV----------ETTLYDLTGDFS 59

Query: 313 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
           Q Y  +  +    +G  ++T F G + + D LRSL+R+  + I +  DV T D Y++R+
Sbjct: 60  QVYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRV 118

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>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae|
          Length = 206

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 32/112 (28%), Positives = 56/112 (50%)
 Frame = +1

Query: 154 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 333
           +K+WY + AP  F    +G+TL           + +  R  + +L+D+++  D    K+ 
Sbjct: 12  EKRWYTVLAPEEFDRAELGETLAEEP-------DQVYDRTIQAALSDVRDGGDNNI-KLT 63

Query: 334 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRM 489
            + +DV   +  T F   + T D  RSLVR+  + +   V V TTD+Y +R+
Sbjct: 64  FQIDDVGSDSASTQFVQAELTRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRI 115

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>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 32/114 (28%), Positives = 55/114 (48%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           + + +K WY ++AP    S+ V   L          S  + +RV EV +++L  +  ++ 
Sbjct: 12  EKWKEKVWYTVEAPPYLGSKEVSVALGED-------SNSMVNRVVEVPISELTGNFKKSN 64

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 483
            K   R  + +G    T F G     D +R LVR+ +  I+   DVKT+DN ++
Sbjct: 65  EKALFRITNCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSII 118

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>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 30/114 (26%), Positives = 53/114 (46%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           + + +K WY +++P    S+ V   L           E + +R+ EV ++DL  +  ++ 
Sbjct: 12  EKWKEKTWYTVESPPYLGSKEVTVALGEDP-------ESMVNRIVEVPISDLTGNFKKSN 64

Query: 322 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 483
            K   R    +G    T F G     D +R LVR+ +  I+   DVKT+D  ++
Sbjct: 65  EKALFRITGCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDGSII 118

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>RS3A_NANEQ (Q74N14) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 27/111 (24%), Positives = 51/111 (45%)
 Frame = +1

Query: 154 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 333
           +K W+ IKAP +F    +G+T   +        E +  R  E+++A + N+      K  
Sbjct: 12  RKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMALVTNNYQLQNYKGI 64

Query: 334 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLR 486
            +   V+G    T   G+        S+++KW   +E   D K TD+++++
Sbjct: 65  FKITKVEGTTAKTELEGIKM----YESIIQKW---VEPGRD-KITDSFVIK 107

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>MNR2_YEAST (P35724) Manganese resistance protein MNR2|
          Length = 969

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +1

Query: 187  LFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGMNV 366
            + +S N  + L+SR+    +A          + +  + ND +    KI +    V  MNV
Sbjct: 871  MVSSLNHYEKLLSRSHSNYLAQ-------INIDMTKVNNDMNDVLGKITILGTIVLPMNV 923

Query: 367  LTNFWGMD 390
            +T  WGM+
Sbjct: 924  ITGLWGMN 931

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>LAT_HUMAN (O43561) Linker for activation of T-cells family member 1 (36 kDa|
           phospho-tyrosine adapter protein) (pp36) (p36-38)
          Length = 262

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 251 EAILVPCVLDTRVLPTLRLVKSSGALMSYHCFLVNGS 141
           EAILVPCVL   +LP L ++ +    +  HC  + GS
Sbjct: 3   EAILVPCVLGLLLLPILAMLMA----LCVHCHRLPGS 35

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>HYSA_STAAU (Q59801) Hyaluronate lyase precursor (EC 4.2.2.1) (Hyaluronidase)|
           (HYase)
          Length = 807

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 22/108 (20%), Positives = 42/108 (38%)
 Frame = +1

Query: 154 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 333
           KK ++ +   ++F    +  T  S+   T I +                N ++Q    + 
Sbjct: 565 KKSYFILNDKIVFLGTGIKSTDSSKNPVTTIENRKANGYTLYTDDKQTTNSDNQENNSVF 624

Query: 334 LRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNY 477
           L + D +  N+  +F      T K  S   KW+ + ++  D + TD Y
Sbjct: 625 LESTDTK-KNIGYHFLNKPKITVKKESHTGKWKEINKSQKDTQKTDEY 671

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>SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sulfate|
           adenylate transferase) (SAT) (ATP-sulfurylase)
          Length = 437

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 12/57 (21%)
 Frame = -1

Query: 157 SW*TDPRPSSCYPSS-------PWRCACSCRPPWLPLRVEW-----RRCGGWSGGLR 23
           +W T   PS+  PSS       PWR   SCRP  L    E      RR G   G LR
Sbjct: 298 AWVTTTVPSTPRPSSMTKCQRAPWRSRSSCRPHGLLQEAEQDCDDARRAGSHQGRLR 354

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>RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF|
          Length = 365

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = -1

Query: 355 LAHPQHGV*SSCRPGPHRSEDQLEILQTP----GASGPLR 248
           L  P+     SCR GPHR E  L++  TP    G+SG  R
Sbjct: 242 LQRPEEERLGSCRVGPHRDEVSLQLGGTPARRFGSSGQQR 281

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>LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-binding protein 3|
            precursor (LTBP-3)
          Length = 1302

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
 Frame = -1

Query: 136  PSSCYPSS----PWRCACSCRPPWLP 71
            P++C P      P    C CRPPW+P
Sbjct: 1088 PAACRPGRCVNLPGSYRCECRPPWVP 1113

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>HEM0_BRARE (Q9YHT4) 5-aminolevulinate synthase, erythroid-specific,|
           mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic
           acid synthase) (Delta-aminolevulinate synthase)
           (Delta-ALA synthetase) (ALAS-E)
          Length = 583

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 200 RLVKSSGALMSYHCFLVNGSTAFFLLPFLP 111
           RL +  GAL+   CF+ N ST F L   LP
Sbjct: 240 RLHQKDGALVFSSCFVANDSTLFTLAKMLP 269

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>IF5_YEAST (P38431) Eukaryotic translation initiation factor 5 (eIF-5)|
          Length = 405

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/58 (22%), Positives = 31/58 (53%)
 Frame = +1

Query: 304 DEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNY 477
           DED+  R+I+  A  ++ + V  + W +D + + +R+  ++    +E + ++   D Y
Sbjct: 198 DEDELSRQIKAAASTLEDIEVKDDEWAVDMSEEAIRARAKE----LEVNSELTQLDEY 251

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>FD4_DROME (P32028) Fork head domain protein FD4|
          Length = 372

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 468 SGLHIDMSLNEGLPLPHKRPELVSGEIH 385
           S  H+  SL  G+PLPH  P  +SG  H
Sbjct: 164 STAHMPNSLGPGVPLPHVMPASMSGADH 191


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,848,376
Number of Sequences: 219361
Number of extensions: 1372561
Number of successful extensions: 4218
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 4040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4186
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result