>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell|
           protein 0)
          Length = 532

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 19/51 (37%), Positives = 21/51 (41%)
 Frame = +3

Query: 3   SSLAKPRDKDSRELSRRPAPPPFSRHTGRPGRTIRARIAPPQQGPCRSRSS 155
           SS   PR +DSR    RP PP   R  GR          P   GP   RS+
Sbjct: 247 SSAQAPRQEDSRPARARPGPPTRGRRRGR---------RPAAPGPASRRSA 288

>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0|
          Length = 532

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 19/51 (37%), Positives = 21/51 (41%)
 Frame = +3

Query: 3   SSLAKPRDKDSRELSRRPAPPPFSRHTGRPGRTIRARIAPPQQGPCRSRSS 155
           SS   PR +DSR    RP PP   R  GR          P   GP   RS+
Sbjct: 247 SSAQAPRQEDSRPARARPGPPTRGRRRGR---------RPAAPGPASRRSA 288

>ST32C_HUMAN (Q86UX6) Serine/threonine-protein kinase 32C (EC 2.7.11.1) (PKE)|
           (YANK3)
          Length = 486

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +3

Query: 27  KDSRELSRRPAPPPFSRHTGRPGRTIRARIAPPQQGP-CRSRSS 155
           K S++L R P P P SR    P      R A P  GP C S  S
Sbjct: 442 KRSQDLPREPLPAPESRDAAEPVEDEAERSALPMCGPICPSAGS 485

>AIM1_HUMAN (Q9Y4K1) Absent in melanoma 1 protein|
          Length = 1723

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
 Frame = +3

Query: 3   SSLAKPRDKDSR--------ELSRRPAPPPFSRHTGRPGRT--IRARIAPPQQGP 137
           +S A P  K S         E  R   PPP S  T R GR+  + A  APP  GP
Sbjct: 71  ASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGP 125

>IF2_XANAC (Q8PJ55) Translation initiation factor IF-2|
          Length = 904

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
 Frame = +2

Query: 11  RKTARQGLAGALAP--------PRSAAVLAAYRSTRAHNPRAHRSAAAGAMSQP 148
           RK A +  A A AP        P +AA  A   S+ +  PRA R A A   S+P
Sbjct: 173 RKAAEEAAAAASAPAPVADAPKPSAAAPAARLPSSPSSAPRAARPAGASPASRP 226

>IF2_XANC5 (Q3BRP5) Translation initiation factor IF-2|
          Length = 904

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
 Frame = +2

Query: 11  RKTARQGLAGALAP--------PRSAAVLAAYRSTRAHNPRAHRSAAAGAMSQP 148
           RK A +  A A AP        P +AA  A   S+ +  PRA R A A   S+P
Sbjct: 173 RKAAEEAAAAASAPAPVADAPTPSAAAPAARSPSSPSSAPRAARPAGASPASRP 226

>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 6   SLAKPRDKDSRELSRR-PAPPPFSRHTGRPGRTI 104
           S +KP  +D +E  RR P+P P   H GR  R +
Sbjct: 139 SKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNV 172

>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 6   SLAKPRDKDSRELSRR-PAPPPFSRHTGRPGRTI 104
           S +KP  +D +E  RR P+P P   H GR  R +
Sbjct: 139 SKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNV 172

>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 6   SLAKPRDKDSRELSRR-PAPPPFSRHTGRPGRTI 104
           S +KP  +D +E  RR P+P P   H GR  R +
Sbjct: 139 SKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNV 172

>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 6   SLAKPRDKDSRELSRR-PAPPPFSRHTGRPGRTI 104
           S +KP  +D +E  RR P+P P   H GR  R +
Sbjct: 139 SKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNV 172

>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related|
           protein LDC2)
          Length = 305

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 6   SLAKPRDKDSRELSRR-PAPPPFSRHTGRPGRTI 104
           S +KP  +D +E  RR P+P P   H GR  R +
Sbjct: 139 SKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNV 172

>WRKY3_ARATH (Q9ZQ70) Probable WRKY transcription factor 3 (WRKY DNA-binding|
           protein 3)
          Length = 513

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +2

Query: 14  KTARQGLAGALAPPRSAAVLAAYRSTRAHNPRAHRSAAAGAMS 142
           K+  Q LAGA+A P +AAV AA     AH+     S   G  S
Sbjct: 60  KSFSQLLAGAMASPAAAAVAAAAVVATAHHQTPVSSVGDGGGS 102

>MPGP_AERPE (Q9YDM7) Mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70)|
           (MPGP)
          Length = 281

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 19/43 (44%), Positives = 22/43 (51%)
 Frame = -1

Query: 146 AATWPLLRRSDARADCAPGSTGMPRERRRSGAARELPRVLVSR 18
           A T   +R S A A  A   TG+PRER    A RE   V+ SR
Sbjct: 120 AETCGAVRLSKADATEAQLITGLPRERAALAARREYLEVIWSR 162


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.309    0.128    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,783,092
Number of Sequences: 219361
Number of extensions: 314741
Number of successful extensions: 1366
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 80,573,946
effective HSP length: 29
effective length of database: 74,212,477
effective search space used: 1781099448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)