ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl19g08 |
|---|---|
| Clone Library Name | barley_pub |
>SF3B1_MOUSE (Q99NB9) Splicing factor 3B subunit 1 (Spliceosome-associated| protein 155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b 155 kDa subunit) Length = 1304 Score = 56.2 bits (134), Expect = 3e-08 Identities = 45/121 (37%), Positives = 50/121 (41%), Gaps = 31/121 (25%) Frame = +1 Query: 70 DAPDATPGIGRWD----------ATPGRV----------GDATPSVRRNRWDETP----- 174 + P ATPG WD ATPGR G AT S R+NRWDETP Sbjct: 243 ETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERD 302 Query: 175 TPGRMXXXXXXXXXXXXXXXXXXXXXWDATPKLPGG----LVTPTP--KKQRSRWDETPA 336 TPG W TP+ G TPTP K++SRWDETPA Sbjct: 303 TPGH-------------------GSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPA 343 Query: 337 S 339 S Sbjct: 344 S 344 Score = 36.6 bits (83), Expect = 0.025 Identities = 23/79 (29%), Positives = 28/79 (35%) Frame = +1 Query: 100 RWDATPGRVGDATPSVRRNRWDETPTPGRMXXXXXXXXXXXXXXXXXXXXXWDATPKLPG 279 RWD T + ATP + + WD+ TPG WD TP Sbjct: 199 RWDQTADQTPGATPK-KLSSWDQAETPGH-----------------TPSLRWDETPGRAK 240 Query: 280 GLVTPTPKKQRSRWDETPA 336 G TP WD TP+ Sbjct: 241 GSETPGATPGSKIWDPTPS 259
>SF3B1_HUMAN (O75533) Splicing factor 3B subunit 1 (Spliceosome-associated| protein 155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b 155 kDa subunit) Length = 1304 Score = 56.2 bits (134), Expect = 3e-08 Identities = 45/121 (37%), Positives = 50/121 (41%), Gaps = 31/121 (25%) Frame = +1 Query: 70 DAPDATPGIGRWD----------ATPGRV----------GDATPSVRRNRWDETP----- 174 + P ATPG WD ATPGR G AT S R+NRWDETP Sbjct: 243 ETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERD 302 Query: 175 TPGRMXXXXXXXXXXXXXXXXXXXXXWDATPKLPGG----LVTPTP--KKQRSRWDETPA 336 TPG W TP+ G TPTP K++SRWDETPA Sbjct: 303 TPGH-------------------GSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPA 343 Query: 337 S 339 S Sbjct: 344 S 344 Score = 36.6 bits (83), Expect = 0.025 Identities = 23/79 (29%), Positives = 28/79 (35%) Frame = +1 Query: 100 RWDATPGRVGDATPSVRRNRWDETPTPGRMXXXXXXXXXXXXXXXXXXXXXWDATPKLPG 279 RWD T + ATP + + WD+ TPG WD TP Sbjct: 199 RWDQTADQTPGATPK-KLSSWDQAETPGH-----------------TPSLRWDETPGRAK 240 Query: 280 GLVTPTPKKQRSRWDETPA 336 G TP WD TP+ Sbjct: 241 GSETPGATPGSKIWDPTPS 259
>SF3B1_XENLA (O57683) Splicing factor 3B subunit 1 (Spliceosome-associated| protein 155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b 155 kDa subunit) (146 kDa nuclear protein) Length = 1307 Score = 55.5 bits (132), Expect = 5e-08 Identities = 42/131 (32%), Positives = 46/131 (35%), Gaps = 38/131 (29%) Frame = +1 Query: 61 SDWDAPDATPGIG----RWDATPGRV-GDATPSVRRNR--WDETP--------TPGRMXX 195 S WD + TPG RWD TPGR G+ TP WD TP TPGR Sbjct: 217 SSWDQAEVTPGHTPSSLRWDETPGRAKGNETPGATPGSKIWDPTPSHTPAGVATPGRGDT 276 Query: 196 XXXXXXXXXXXXXXXXXXXWDATPKLP-----------------------GGLVTPTPKK 306 WD TPK G TP K Sbjct: 277 PGHVTPGHSGATSSARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASK 336 Query: 307 QRSRWDETPAS 339 ++SRWDETPAS Sbjct: 337 RKSRWDETPAS 347 Score = 31.6 bits (70), Expect = 0.79 Identities = 21/69 (30%), Positives = 24/69 (34%), Gaps = 3/69 (4%) Frame = +1 Query: 139 PSVRRNRWDET--PTPGRM-XXXXXXXXXXXXXXXXXXXXXWDATPKLPGGLVTPTPKKQ 309 PS R+ RWD+T TPG WD TP G TP Sbjct: 194 PSKRKRRWDQTGDQTPGSTPKKLSSWDQAEVTPGHTPSSLRWDETPGRAKGNETPGATPG 253 Query: 310 RSRWDETPA 336 WD TP+ Sbjct: 254 SKIWDPTPS 262
>LP61_EIMTE (P15714) Antigen LPMC-61 (Fragment)| Length = 255 Score = 35.4 bits (80), Expect = 0.055 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 8/49 (16%) Frame = -3 Query: 145 QRAWHLQHVQG-----W---RPSAQSQELRQEHPSLRSWTSWPQQRHRR 23 Q+ W QH Q W +P Q ++ Q+ P ++ WPQQ+HRR Sbjct: 63 QQQWPEQHQQAQQQQQWPQQQPQMQQEQWPQQQPQVQQQQQWPQQQHRR 111
>GLPK_RALSO (Q8XUY1) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 498 Score = 32.3 bits (72), Expect = 0.46 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Frame = -3 Query: 223 CHRL--QGLHLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWT 50 C RL +GL L P +S ++ W L HV G R A EL ++ SW Sbjct: 110 CERLRAEGLEDEVRKRTGLVIDPYFSGTKLRWILDHVDGARERAARGEL--AFGTIDSWL 167 Query: 49 SWPQQRHRRPATD 11 W R R TD Sbjct: 168 VWQLTRGRLHVTD 180
>SF3B1_SCHPO (Q10178) U2 snRNP component prp10| Length = 1188 Score = 31.2 bits (69), Expect = 1.0 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 88 PGIGRWDATPGRVGDATPSVRRNRWDETP 174 P RWD P V + + RR+RWD+ P Sbjct: 214 PKRSRWDQAPPSVTQVSTTKRRSRWDKAP 242
>GLPK_ECOLI (P0A6F3) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 501 Score = 30.4 bits (67), Expect = 1.8 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Frame = -3 Query: 229 E*CHRLQ--GLHLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRS 56 E C L+ GL S+ L P +S ++ W L HV+G R A+ EL ++ + Sbjct: 110 EICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELL--FGTVDT 167 Query: 55 WTSWPQQRHRRPATDPT 5 W W + R TD T Sbjct: 168 WLIWKMTQGRVHVTDYT 184
>GLPK_ECO57 (P0A6F4) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 501 Score = 30.4 bits (67), Expect = 1.8 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Frame = -3 Query: 229 E*CHRLQ--GLHLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRS 56 E C L+ GL S+ L P +S ++ W L HV+G R A+ EL ++ + Sbjct: 110 EICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELL--FGTVDT 167 Query: 55 WTSWPQQRHRRPATDPT 5 W W + R TD T Sbjct: 168 WLIWKMTQGRVHVTDYT 184
>GLPK_BORPE (Q7VSU7) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 508 Score = 30.4 bits (67), Expect = 1.8 Identities = 20/72 (27%), Positives = 36/72 (50%) Frame = -3 Query: 220 HRLQGLHLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWP 41 H G L++ + L ++++ +S ++ AW L HV G R A+ EL ++ +W W Sbjct: 118 HDGHGRMLQERTGLVVDAY--FSGTKLAWLLDHVPGARKMAERGEL--AFGTMDTWLVWQ 173 Query: 40 QQRHRRPATDPT 5 +TDP+ Sbjct: 174 LTGGAVHSTDPS 185
>GLPK_PASMU (P57944) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 502 Score = 30.0 bits (66), Expect = 2.3 Identities = 19/66 (28%), Positives = 34/66 (51%) Frame = -3 Query: 202 HLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRR 23 ++RQ + L ++ P +S ++ W L +V+G R A+ EL ++ +W W + R Sbjct: 124 YIRQTTGLVVD--PYFSGTKIKWILDNVEGAREQAERGELL--FGTVDTWLVWKLTQGRA 179 Query: 22 PATDPT 5 TD T Sbjct: 180 HVTDYT 185
>GLPK_ECOL6 (Q8FBC3) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 501 Score = 30.0 bits (66), Expect = 2.3 Identities = 19/66 (28%), Positives = 33/66 (50%) Frame = -3 Query: 202 HLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRR 23 ++R + L ++ P +S ++ W L HV+G R A+ EL ++ +W W + R Sbjct: 123 YIRNNTGLVID--PYFSGTKVKWILDHVEGSRERARRGELL--FGTVDTWLIWKMTQGRV 178 Query: 22 PATDPT 5 TD T Sbjct: 179 HVTDYT 184
>VE1_MNPV (Q84356) Replication protein E1 (EC 3.6.1.-) (ATP-dependent| helicase E1) Length = 602 Score = 30.0 bits (66), Expect = 2.3 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -3 Query: 217 RLQGLHLRQPSSLELESHPTYSSSQRAW 134 R+Q HL++P ++ +P YS S R W Sbjct: 534 RIQVFHLKEPMPIDTAGNPEYSFSNRHW 561
>TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome protein)| Length = 1411 Score = 30.0 bits (66), Expect = 2.3 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 91 GIGRWDATPGRVGDATPSVRRNRWDE 168 G G PG+VG ATPS + +W+E Sbjct: 441 GKGAGPVPPGKVGPATPSAQVGKWEE 466
>E2F_DROME (Q27368) Transcription factor E2f (dE2F)| Length = 805 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -3 Query: 196 RQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLR 59 R+P ++ E HP + Q A H Q S+ Q+LR H LR Sbjct: 161 RRPHAVSDEIHPKKQAKQSAHHQTVYQKHTASSAPQQLRHSHHQLR 206
>GLPK_BORPA (Q7W3R1) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 508 Score = 30.0 bits (66), Expect = 2.3 Identities = 20/72 (27%), Positives = 36/72 (50%) Frame = -3 Query: 220 HRLQGLHLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWP 41 H G L++ + L ++++ +S ++ AW L HV G R A+ EL ++ +W W Sbjct: 118 HDGHGRMLQERTGLVVDAY--FSGTKLAWLLDHVPGARKMAERGEL--AFGTVDTWLVWQ 173 Query: 40 QQRHRRPATDPT 5 +TDP+ Sbjct: 174 LTGGAVHSTDPS 185
>GLPK_BORBR (Q7WF38) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 508 Score = 30.0 bits (66), Expect = 2.3 Identities = 20/72 (27%), Positives = 36/72 (50%) Frame = -3 Query: 220 HRLQGLHLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWP 41 H G L++ + L ++++ +S ++ AW L HV G R A+ EL ++ +W W Sbjct: 118 HDGHGRMLQERTGLVVDAY--FSGTKLAWLLDHVPGARKMAERGEL--AFGTVDTWLVWQ 173 Query: 40 QQRHRRPATDPT 5 +TDP+ Sbjct: 174 LTGGAVHSTDPS 185
>USH2A_RAT (Q8K3K1) Usherin precursor (Usher syndrome type-2A protein homolog)| (Usher syndrome type IIa protein homolog) Length = 1512 Score = 30.0 bits (66), Expect = 2.3 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 9/45 (20%) Frame = -1 Query: 303 LGCWCDK--------PTRQLRSSIPC-PRRGGSWSNATGCRGCIC 196 LG CD P RQ R + C P S SNATGC C+C Sbjct: 905 LGSMCDPVSGQCLCLPHRQERRCVQCQPGCYSSPSNATGCLPCLC 949
>GLPK_SALTY (Q8ZKP3) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 501 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = -3 Query: 163 PTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRRPATDPT 5 P +S ++ W L HV+G R A+ EL ++ +W W + R TD T Sbjct: 134 PYFSGTKVKWILDHVEGSRERAKRGELL--FGTVDTWLIWKMTQGRVHVTDYT 184
>GLPK_SALTI (Q8Z2Y6) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 500 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = -3 Query: 163 PTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRRPATDPT 5 P +S ++ W L HV+G R A+ EL ++ +W W + R TD T Sbjct: 133 PYFSGTKVKWILDHVEGSRERAKRGELL--FGTVDTWLIWKMTQGRVHVTDYT 183
>PNS1_GIBZE (Q4I8E9) Protein PNS1| Length = 538 Score = 29.6 bits (65), Expect = 3.0 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +2 Query: 158 GGMRLQLQGGWLTQMQPLQPVALLQEPP 241 GG + Q GG+ Q QP P A Q PP Sbjct: 10 GGQQQQYNGGYQQQYQPQPPAASYQAPP 37
>MOAA_AERPE (Q9YEV3) Probable molybdenum cofactor biosynthesis protein A| Length = 355 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +2 Query: 314 RGGTRHQRVWGVQHLVARQRHLQVSTLLDRHHLGQ 418 RGG+R ++VW V ++ L+ T L R H GQ Sbjct: 285 RGGSREEKVWRVMKILLEANALRRPTYLFRLHDGQ 319
>CHIT_STRLI (P36909) Chitinase C precursor (EC 3.2.1.14)| Length = 619 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +1 Query: 58 TSDWDAPDATPGIGRWDATPGRVGDATPSVRRNRWDETPTPG 183 T +WD P T WDAT GD + + W+ T PG Sbjct: 66 TVEWDFPTGTKVTSAWDATVTNSGDHW-TAKNVGWNGTLAPG 106
>GLPK_SHIFL (Q7UB84) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 502 Score = 28.9 bits (63), Expect = 5.1 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = -3 Query: 202 HLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRR 23 ++R + L L+ P +S ++ W L HV+G A+ EL ++ +W W + R Sbjct: 124 YIRSNTGLVLD--PYFSGTKVKWILDHVEGSHERARRGELL--FGTVDTWLIWKMTQGRV 179 Query: 22 PATDPT 5 TD T Sbjct: 180 HVTDYT 185
>GLPK_PSESM (Q87XL0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 501 Score = 28.9 bits (63), Expect = 5.1 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = -3 Query: 202 HLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRR 23 +++ + L L+ P +S S+ W L HV+G R A+ EL ++ +W W + Sbjct: 127 YIKDTTGLVLD--PYFSGSKVKWILDHVEGSRERARKGELM--FGTIDTWLIWKFTGGKV 182 Query: 22 PATDPT 5 TD T Sbjct: 183 HVTDYT 188
>GLPK_VIBVY (Q7MI93) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 505 Score = 28.9 bits (63), Expect = 5.1 Identities = 18/66 (27%), Positives = 35/66 (53%) Frame = -3 Query: 202 HLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRR 23 ++R+ + L L+ P +S ++ W L +V+G R A++ +L ++ +W W + R Sbjct: 124 YIRENTGLVLD--PYFSGTKVKWILDNVEGAREDAEAGKLL--FGTVDTWLVWKMTQGRV 179 Query: 22 PATDPT 5 TD T Sbjct: 180 HVTDYT 185
>GLPK_VIBVU (Q8DBM6) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 505 Score = 28.9 bits (63), Expect = 5.1 Identities = 18/66 (27%), Positives = 35/66 (53%) Frame = -3 Query: 202 HLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRR 23 ++R+ + L L+ P +S ++ W L +V+G R A++ +L ++ +W W + R Sbjct: 124 YIRENTGLVLD--PYFSGTKVKWILDNVEGAREDAEAGKLL--FGTVDTWLVWKMTQGRV 179 Query: 22 PATDPT 5 TD T Sbjct: 180 HVTDYT 185
>Y104_SYNY3 (P54371) Hypothetical protein slr0104| Length = 811 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -2 Query: 158 LFLLTEGVASPTRPGVASQRPIPGVASGASQSEVL 54 +F L + VAS + AS P+P + SQ E + Sbjct: 4 IFALRQAVASQLKKSTASSHPLPRTTASTSQDETI 38
>GLPK_VIBCH (Q9KLJ9) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 505 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/66 (27%), Positives = 34/66 (51%) Frame = -3 Query: 202 HLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRR 23 ++R + L L+ P +S ++ W L +V+G R A++ +L ++ +W W + R Sbjct: 124 YIRDNTGLVLD--PYFSGTKIKWILDNVEGAREQAEAGQLL--FGTVDTWLVWKMTQGRV 179 Query: 22 PATDPT 5 TD T Sbjct: 180 HVTDYT 185
>GLPK_XANAC (Q8PQG7) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = -3 Query: 199 LRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRRP 20 +R + L ++++ +S ++ W L HV+G R AQ EL ++ SW W + Sbjct: 124 VRDKTGLLIDAY--FSGTKVKWILDHVEGARERAQKGEL--AFGTIDSWLIWNLTGGKVH 179 Query: 19 ATDPT 5 TD T Sbjct: 180 VTDYT 184
>GLPK_RHILO (Q98M73) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 496 Score = 28.1 bits (61), Expect = 8.8 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = -3 Query: 223 CHRL--QGLHLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWT 50 C +L QGL + L P +S ++ AW L V+G R A+ EL ++ S+ Sbjct: 111 CQKLKKQGLEKKFTRKTGLLLDPYFSGTKIAWILDKVKGGRKRAEKGELLA--GTIDSFL 168 Query: 49 SWPQQRHRRPATDPT 5 W + ATD T Sbjct: 169 IWRLTGGKVHATDAT 183
>GLPK_CLOPE (Q8XHD3) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 500 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/66 (27%), Positives = 34/66 (51%) Frame = -3 Query: 202 HLRQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRR 23 ++R+ + L L+++ +S ++ W L +V+G R A+ EL ++ SW W + Sbjct: 123 YIRENTGLVLDAY--FSGTKIKWILDNVEGAREKAEKGELL--FGTVDSWLVWKLTNGKV 178 Query: 22 PATDPT 5 TD T Sbjct: 179 HVTDYT 184
>GLPK_STAES (Q8CSS0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/64 (28%), Positives = 31/64 (48%) Frame = -3 Query: 196 RQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRRPA 17 R+ + L L+ P ++ ++ W L HV+G R A++ +L ++ SW W Sbjct: 124 REKTGLLLD--PYFAGTKVKWILDHVEGAREKAENGDLL--FGTIDSWLVWKLSGRTAHI 179 Query: 16 TDPT 5 TD T Sbjct: 180 TDYT 183
>GLPK_STAEQ (Q5HPP1) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/64 (28%), Positives = 31/64 (48%) Frame = -3 Query: 196 RQPSSLELESHPTYSSSQRAWHLQHVQGWRPSAQSQELRQEHPSLRSWTSWPQQRHRRPA 17 R+ + L L+ P ++ ++ W L HV+G R A++ +L ++ SW W Sbjct: 124 REKTGLLLD--PYFAGTKVKWILDHVEGAREKAENGDLL--FGTIDSWLVWKLSGRTAHI 179 Query: 16 TDPT 5 TD T Sbjct: 180 TDYT 183 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.132 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,319,153 Number of Sequences: 219361 Number of extensions: 1272029 Number of successful extensions: 3081 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 2939 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3058 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
