ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl19f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480473.1| Oryza sativa (japonica cultivar-group), mRNA 214 1e-52
2gb|AY104770.1| Zea mays PCO074909 mRNA sequence 190 2e-45
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 135 8e-29
4dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic D... 135 8e-29
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 115 8e-23
6dbj|AP006166.3| Oryza sativa (japonica cultivar-group) genomic D... 115 8e-23
7dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic D... 115 8e-23
8gb|AY250116.1| Lycopersicon pennellii aconitase mRNA, partial cds 60 4e-06
9ref|NM_153480.1| Homo sapiens interleukin 17 receptor E (IL17RE)... 42 0.94
10ref|NM_153483.1| Homo sapiens interleukin 17 receptor E (IL17RE)... 42 0.94
11ref|NM_153482.1| Homo sapiens interleukin 17 receptor E (IL17RE)... 42 0.94
12ref|NM_153481.1| Homo sapiens interleukin 17 receptor E (IL17RE)... 42 0.94
13ref|NM_144640.2| Homo sapiens interleukin 17 receptor E (IL17RE)... 42 0.94
14emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromo... 42 0.94
15gb|AY358451.1| Homo sapiens clone DNA119502 GSSR3056 (UNQ3056) m... 42 0.94
16emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on ch... 42 0.94
17gb|AF458069.1| Homo sapiens IL-17RE mRNA, complete cds 42 0.94
18dbj|AK096793.1| Homo sapiens cDNA FLJ39474 fis, clone PROST2013053 42 0.94
19gb|AC007783.26| Homo sapiens 3 BAC CTB-140O19 (Cal Tech Human BA... 42 0.94
20gb|AC022007.5| Homo sapiens chromosome 3 clone RP11-481H17 map 3... 42 0.94
21gb|AC018809.5| Homo sapiens chromosome 3 clone RP11-1020A11 map ... 42 0.94
22dbj|AK074238.1| Homo sapiens cDNA FLJ23658 fis, clone COLF3416 42 0.94
23dbj|AP000907.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 0.94
24dbj|AP002007.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 0.94
25gb|AY207049.1|AY207048S2 Mus musculus postsynaptic density-95 ge... 42 0.94
26gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 0.94
27gb|BC035478.1| Homo sapiens interleukin 17 receptor E, transcrip... 42 0.94
28gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 3.7
29gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 3.7
30ref|NM_007864.1| Mus musculus discs, large homolog 4 (Drosophila... 40 3.7
31gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 3.7
32gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 40 3.7
33emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes 40 3.7
34emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome 40 3.7
35ref|NM_019621.1| Rattus norvegicus discs, large homolog 4 (Droso... 40 3.7
36gb|BC014807.1| Mus musculus discs, large homolog 4 (Drosophila),... 40 3.7
37emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chro... 40 3.7
38gb|CP000088.1| Thermobifida fusca YX, complete genome 40 3.7
39gb|DQ119347.1| Medicago sativa villin 3 mRNA, partial cds 40 3.7
40emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 3.7
41emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 40 3.7
42emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 3.7
43gb|S56149.1| thymidine kinase [bovine encephalitis herpesvirus, ... 40 3.7
44ref|XM_579440.1| PREDICTED: Rattus norvegicus hypothetical gene ... 40 3.7
45gb|AE005007.1| Halobacterium sp. NRC-1 section 38 of 170 of the ... 40 3.7
46emb|CT025867.20| Mouse DNA sequence from clone RP24-318I24 on ch... 40 3.7
47emb|X66474.1|RNSAP90AM R.norvegicus mRNA for guanylate kinase 40 3.7
48dbj|D50621.1|MUSPSD95SP Mus musculus mRNA for PSD-95/SAP90A, com... 40 3.7
49emb|CT009579.20| Mouse DNA sequence from clone CH29-133M20 on ch... 40 3.7
50gb|M96853.1|RATPSD95A Rat postsynaptic density protein (PSD-95),... 40 3.7
51dbj|D00438.1|HSBTK6 Bovine herpesvirus type 1 gene for thymidine... 40 3.7 
>ref|XM_480473.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2697

 Score =  214 bits (108), Expect = 1e-52
 Identities = 123/128 (96%)
 Strand = Plus / Plus

                                                                       
Query: 154 attttgaccagcctccctaagcccgggggtggtgaatatgggaaattctacagccttcct 213
           |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 28  attttgaccaccctccctaagcctgggggtggtgaatatgggaaattctacagccttcct 87

                                                                       
Query: 214 gcactaaatgatccaaggatcgataagctgccctactctatccgtattcttctggagtca 273
           |||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 88  gcactaaatgatcccaggattgataagctgccctactctatccgtattcttctagagtca 147

                   
Query: 274 gctatccg 281
           ||||||||
Sbjct: 148 gctatccg 155
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>gb|AY104770.1| Zea mays PCO074909 mRNA sequence
          Length = 3628

 Score =  190 bits (96), Expect = 2e-45
 Identities = 156/176 (88%)
 Strand = Plus / Plus

                                                                       
Query: 109 cagcgcaggatggccgcctcaggtactgagcatgcctacagcaatattttgaccagcctc 168
           ||||||||||||||  ||  || ||||| |||||||| ||   ||||| |||||||||||
Sbjct: 318 cagcgcaggatggcaacccaagctactgtgcatgccttcaaggatattctgaccagcctc 377

                                                                       
Query: 169 cctaagcccgggggtggtgaatatgggaaattctacagccttcctgcactaaatgatcca 228
           |||||||| || |||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 378 cctaagcctggaggtggtgaatatggaaagttctacagccttcctgcactaaatgatcca 437

                                                                   
Query: 229 aggatcgataagctgccctactctatccgtattcttctggagtcagctatccgtaa 284
           ||||| ||||||||||| |||||  ||||||||||||| |||||||||||||||||
Sbjct: 438 aggattgataagctgccgtactccgtccgtattcttcttgagtcagctatccgtaa 493
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  135 bits (68), Expect = 8e-29
 Identities = 77/80 (96%)
 Strand = Plus / Minus

                                                                           
Query: 154     attttgaccagcctccctaagcccgggggtggtgaatatgggaaattctacagccttcct 213
               |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5327086 attttgaccaccctccctaagcctgggggtggtgaatatgggaaattctacagccttcct 5327027

                                   
Query: 214     gcactaaatgatccaaggat 233
               |||||||||||||| |||||
Sbjct: 5327026 gcactaaatgatcccaggat 5327007



 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                              
Query: 235     gataagctgccctactctatccgtattcttctggagtcagctatccg 281
               |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5326598 gataagctgccctactctatccgtattcttctagagtcagctatccg 5326552
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>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0610E02
          Length = 135816

 Score =  135 bits (68), Expect = 8e-29
 Identities = 77/80 (96%)
 Strand = Plus / Minus

                                                                          
Query: 154    attttgaccagcctccctaagcccgggggtggtgaatatgggaaattctacagccttcct 213
              |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 118674 attttgaccaccctccctaagcctgggggtggtgaatatgggaaattctacagccttcct 118615

                                  
Query: 214    gcactaaatgatccaaggat 233
              |||||||||||||| |||||
Sbjct: 118614 gcactaaatgatcccaggat 118595



 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                             
Query: 235    gataagctgccctactctatccgtattcttctggagtcagctatccg 281
              |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 118186 gataagctgccctactctatccgtattcttctagagtcagctatccg 118140
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  115 bits (58), Expect = 8e-23
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                            
Query: 132      tactgagcatgcctacagcaatattttgaccagcctccctaagcccgggggtggtgaata 191
                |||| ||||||||| ||  |||||||||  ||||||||| ||||| || |||||||||||
Sbjct: 11279371 tactaagcatgccttcaagaatattttggtcagcctcccaaagccaggtggtggtgaata 11279430

                                                          
Query: 192      tgggaaattctacagccttcctgcactaaatgatccaaggat 233
                |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 11279431 tgggaagttttacagccttcctgcactaaatgatccaaggat 11279472



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 235      gataagctgccctactctatccgtattcttctggagtcagctatccg 281
                |||||||| || ||||||||| || |||| |||||||||||||||||
Sbjct: 11281410 gataagcttccttactctatctgtgttctcctggagtcagctatccg 11281456
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>dbj|AP006166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1435D02
          Length = 131152

 Score =  115 bits (58), Expect = 8e-23
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                         
Query: 132   tactgagcatgcctacagcaatattttgaccagcctccctaagcccgggggtggtgaata 191
             |||| ||||||||| ||  |||||||||  ||||||||| ||||| || |||||||||||
Sbjct: 94670 tactaagcatgccttcaagaatattttggtcagcctcccaaagccaggtggtggtgaata 94729

                                                       
Query: 192   tgggaaattctacagccttcctgcactaaatgatccaaggat 233
             |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 94730 tgggaagttttacagccttcctgcactaaatgatccaaggat 94771



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 235   gataagctgccctactctatccgtattcttctggagtcagctatccg 281
             |||||||| || ||||||||| || |||| |||||||||||||||||
Sbjct: 96709 gataagcttccttactctatctgtgttctcctggagtcagctatccg 96755
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>dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0042E12
          Length = 164688

 Score =  115 bits (58), Expect = 8e-23
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                          
Query: 132    tactgagcatgcctacagcaatattttgaccagcctccctaagcccgggggtggtgaata 191
              |||| ||||||||| ||  |||||||||  ||||||||| ||||| || |||||||||||
Sbjct: 154193 tactaagcatgccttcaagaatattttggtcagcctcccaaagccaggtggtggtgaata 154252

                                                        
Query: 192    tgggaaattctacagccttcctgcactaaatgatccaaggat 233
              |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 154253 tgggaagttttacagccttcctgcactaaatgatccaaggat 154294



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                             
Query: 235    gataagctgccctactctatccgtattcttctggagtcagctatccg 281
              |||||||| || ||||||||| || |||| |||||||||||||||||
Sbjct: 156232 gataagcttccttactctatctgtgttctcctggagtcagctatccg 156278
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>gb|AY250116.1| Lycopersicon pennellii aconitase mRNA, partial cds
          Length = 2694

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 211 cctgcactaaatgatccaaggatcgataagctgccctactctatccgtattcttctggag 270
           ||||| || |||||||| ||||| || ||||| || ||||||||| | ||||||||||| 
Sbjct: 85  cctgctctcaatgatcccaggattgacaagctaccatactctatcaggattcttctggaa 144

                         
Query: 271 tcagctatccgtaa 284
           ||||| ||||||||
Sbjct: 145 tcagcaatccgtaa 158
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>ref|NM_153480.1| Homo sapiens interleukin 17 receptor E (IL17RE), transcript variant
            1, mRNA
          Length = 2717

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   cgtcgcgcccgccgcccagcg 101
            |||||||||||||||||||||
Sbjct: 1669 cgtcgcgcccgccgcccagcg 1649
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>ref|NM_153483.1| Homo sapiens interleukin 17 receptor E (IL17RE), transcript variant
            5, mRNA
          Length = 2729

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   cgtcgcgcccgccgcccagcg 101
            |||||||||||||||||||||
Sbjct: 1681 cgtcgcgcccgccgcccagcg 1661
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>ref|NM_153482.1| Homo sapiens interleukin 17 receptor E (IL17RE), transcript variant
            4, mRNA
          Length = 2830

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   cgtcgcgcccgccgcccagcg 101
            |||||||||||||||||||||
Sbjct: 1799 cgtcgcgcccgccgcccagcg 1779
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>ref|NM_153481.1| Homo sapiens interleukin 17 receptor E (IL17RE), transcript variant
            2, mRNA
          Length = 2581

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   cgtcgcgcccgccgcccagcg 101
            |||||||||||||||||||||
Sbjct: 1533 cgtcgcgcccgccgcccagcg 1513
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>ref|NM_144640.2| Homo sapiens interleukin 17 receptor E (IL17RE), transcript variant
            3, mRNA
          Length = 2791

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   cgtcgcgcccgccgcccagcg 101
            |||||||||||||||||||||
Sbjct: 1743 cgtcgcgcccgccgcccagcg 1723
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>emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromosome 11, complete
              sequence
          Length = 176646

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 108    gcagcgcaggatggccgcctcaggt 132
              ||||| |||||||||||||||||||
Sbjct: 135447 gcagcccaggatggccgcctcaggt 135471
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>gb|AY358451.1| Homo sapiens clone DNA119502 GSSR3056 (UNQ3056) mRNA, complete cds
          Length = 2138

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   cgtcgcgcccgccgcccagcg 101
            |||||||||||||||||||||
Sbjct: 1669 cgtcgcgcccgccgcccagcg 1649
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>emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the
              5' end of the Centb1 gene for centaurin beta 1, the gene
              for a novel protein similar to protein phosphatase 1
              regulatory (inhibitor) subunit 2 Ppp1r2, a novel gene, the
              Gps2 gene for G protein pathway suppressor 2, the Eif5a
              gene for eukaryotic translation initiation factor 5A, the
              Ybx2 gene for Y box protein 2, the Slc2a4 gene for solute
              carrier family 2 (facilitated glucose transporter) member
              4, a non-muscle cofilin 1 (Cfl1) pseudogene, the Cldn7 gene
              for claudin 7, the Rai12 gene for retinoic acid induced 12,
              the Dullard gene for Dullard homolog (Xenopus laevis)
              (novel NLI interacting factor-like phosphatase), the gene
              for novel PHD-finger protein JUNE1, the Dvl2 gene for
              dishevelled 2 dsh homolog (Drosophila), the Acadvl gene for
              acyl-Coenzyme A dehydrogenase very long chain, the Dlgh4
              gene for discs large homolog 4 (Drosophila), the Asgr1 and
              Asgr2 genes for asialoglycoprotein receptor 1 and 2, a
              ribosomal protein L26 (Rpl26) pseudogene, the 5' end of the
              Mgl2 gene for macrophage galactose N-acetyl-galactosamine
              specific lectin 2 and nine CpG islands, complete sequence
          Length = 248203

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 108    gcagcgcaggatggccgcctcaggt 132
              ||||| |||||||||||||||||||
Sbjct: 142614 gcagcccaggatggccgcctcaggt 142638
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>gb|AF458069.1| Homo sapiens IL-17RE mRNA, complete cds
          Length = 2138

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   cgtcgcgcccgccgcccagcg 101
            |||||||||||||||||||||
Sbjct: 1669 cgtcgcgcccgccgcccagcg 1649
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>dbj|AK096793.1| Homo sapiens cDNA FLJ39474 fis, clone PROST2013053
          Length = 2808

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   cgtcgcgcccgccgcccagcg 101
            |||||||||||||||||||||
Sbjct: 1777 cgtcgcgcccgccgcccagcg 1757
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>gb|AC007783.26| Homo sapiens 3 BAC CTB-140O19 (Cal Tech Human BAC Library B) complete
              sequence
          Length = 168665

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     cgtcgcgcccgccgcccagcg 101
              |||||||||||||||||||||
Sbjct: 116774 cgtcgcgcccgccgcccagcg 116794
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>gb|AC022007.5| Homo sapiens chromosome 3 clone RP11-481H17 map 3p, complete sequence
          Length = 173767

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    cgtcgcgcccgccgcccagcg 101
             |||||||||||||||||||||
Sbjct: 66233 cgtcgcgcccgccgcccagcg 66213
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>gb|AC018809.5| Homo sapiens chromosome 3 clone RP11-1020A11 map 3p, complete sequence
          Length = 216911

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    cgtcgcgcccgccgcccagcg 101
             |||||||||||||||||||||
Sbjct: 63722 cgtcgcgcccgccgcccagcg 63742
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>dbj|AK074238.1| Homo sapiens cDNA FLJ23658 fis, clone COLF3416
          Length = 2771

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   cgtcgcgcccgccgcccagcg 101
            |||||||||||||||||||||
Sbjct: 1723 cgtcgcgcccgccgcccagcg 1703
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>dbj|AP000907.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-708L7, complete
              sequence
          Length = 176273

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 63     ggtcaggggcaggggcagcgt 83
              |||||||||||||||||||||
Sbjct: 161004 ggtcaggggcaggggcagcgt 161024
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>dbj|AP002007.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-762O23, complete
             sequence
          Length = 168922

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    ggtcaggggcaggggcagcgt 83
             |||||||||||||||||||||
Sbjct: 76483 ggtcaggggcaggggcagcgt 76503
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>gb|AY207049.1|AY207048S2 Mus musculus postsynaptic density-95 gene, exons 2 through 8 and
            partial cds; alternatively spliced
          Length = 5804

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 108  gcagcgcaggatggccgcctcaggt 132
            ||||| |||||||||||||||||||
Sbjct: 4047 gcagcccaggatggccgcctcaggt 4071
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 76      ggcagcgtcgcgcccgccgcc 96
               |||||||||||||||||||||
Sbjct: 3223719 ggcagcgtcgcgcccgccgcc 3223739
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>gb|BC035478.1| Homo sapiens interleukin 17 receptor E, transcript variant 5, mRNA
            (cDNA clone IMAGE:5175510)
          Length = 2158

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   cgtcgcgcccgccgcccagcg 101
            |||||||||||||||||||||
Sbjct: 1681 cgtcgcgcccgccgcccagcg 1661
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 79      agcgtcgcgcccgccgcccagcgg 102
               |||| |||||||||||||||||||
Sbjct: 1953917 agcgacgcgcccgccgcccagcgg 1953940
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 79      agcgtcgcgcccgccgcccagcgg 102
               |||| |||||||||||||||||||
Sbjct: 1478532 agcggcgcgcccgccgcccagcgg 1478509
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>ref|NM_007864.1| Mus musculus discs, large homolog 4 (Drosophila) (Dlgh4), mRNA
          Length = 2338

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 108 gcagcgcaggatggccgcctcagg 131
           ||||| ||||||||||||||||||
Sbjct: 370 gcagcccaggatggccgcctcagg 393
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 76      ggcagcgtcgcgcccgccgc 95
               ||||||||||||||||||||
Sbjct: 1956760 ggcagcgtcgcgcccgccgc 1956779
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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    cagcgtcgcgcccgccgccc 97
             ||||||||||||||||||||
Sbjct: 65606 cagcgtcgcgcccgccgccc 65587
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>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes
          Length = 37000

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    cagcgtcgcgcccgccgccc 97
             ||||||||||||||||||||
Sbjct: 33470 cagcgtcgcgcccgccgccc 33451
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>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome
          Length = 135301

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    cagcgtcgcgcccgccgccc 97
             ||||||||||||||||||||
Sbjct: 64270 cagcgtcgcgcccgccgccc 64251
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>ref|NM_019621.1| Rattus norvegicus discs, large homolog 4 (Drosophila) (Dlgh4), mRNA
          Length = 3083

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 108 gcagcgcaggatggccgcctcagg 131
           ||||| ||||||||||||||||||
Sbjct: 370 gcagcccaggatggccgcctcagg 393
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>gb|BC014807.1| Mus musculus discs, large homolog 4 (Drosophila), mRNA (cDNA clone
           MGC:25332 IMAGE:4501403), complete cds
          Length = 3076

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 108 gcagcgcaggatggccgcctcagg 131
           ||||| ||||||||||||||||||
Sbjct: 364 gcagcccaggatggccgcctcagg 387
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>emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chromosome 1p32.1-33
             Contains the 3' ends of genes FLJ34719 and KIAA0191,
             complete sequence
          Length = 127006

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   gaatatgggaaattctacag 206
             ||||||||||||||||||||
Sbjct: 13214 gaatatgggaaattctacag 13233
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     ccagcggtcccagcagcgca 115
              ||||||||||||||||||||
Sbjct: 580878 ccagcggtcccagcagcgca 580897
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>gb|DQ119347.1| Medicago sativa villin 3 mRNA, partial cds
          Length = 532

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tgaatatgggaaattctaca 205
           ||||||||||||||||||||
Sbjct: 54  tgaatatgggaaattctaca 73
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 79      agcgtcgcgcccgccgcccagcgg 102
               |||| |||||||||||||||||||
Sbjct: 1365631 agcggcgcgcccgccgcccagcgg 1365608
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     cgcccgccgcccagcggtcc 105
              ||||||||||||||||||||
Sbjct: 178832 cgcccgccgcccagcggtcc 178851
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      agcgtcgcgcccgccgccca 98
               ||||||||||||||||||||
Sbjct: 1650480 agcgtcgcgcccgccgccca 1650499
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>gb|S56149.1| thymidine kinase [bovine encephalitis herpesvirus, strain N 569,
           Genomic, 1053 nt]
          Length = 1053

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  cagcgtcgcgcccgccgccc 97
           ||||||||||||||||||||
Sbjct: 981 cagcgtcgcgcccgccgccc 962
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>ref|XM_579440.1| PREDICTED: Rattus norvegicus hypothetical gene supported by
           NM_019621 (LOC497670), mRNA
          Length = 3070

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 108 gcagcgcaggatggccgcctcagg 131
           ||||| ||||||||||||||||||
Sbjct: 370 gcagcccaggatggccgcctcagg 393
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>gb|AE005007.1| Halobacterium sp. NRC-1 section 38 of 170 of the complete genome
          Length = 10293

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   cgtcgcgcccgccgcccagc 100
            ||||||||||||||||||||
Sbjct: 9161 cgtcgcgcccgccgcccagc 9180
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>emb|CT025867.20| Mouse DNA sequence from clone RP24-318I24 on chromosome 17, complete
             sequence
          Length = 92816

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    gcagcgtcgcgcccgccgcc 96
             ||||||||||||||||||||
Sbjct: 61781 gcagcgtcgcgcccgccgcc 61762
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>emb|X66474.1|RNSAP90AM R.norvegicus mRNA for guanylate kinase
          Length = 2447

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 108 gcagcgcaggatggccgcctcagg 131
           ||||| ||||||||||||||||||
Sbjct: 515 gcagcccaggatggccgcctcagg 538
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>dbj|D50621.1|MUSPSD95SP Mus musculus mRNA for PSD-95/SAP90A, complete cds
          Length = 2338

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 108 gcagcgcaggatggccgcctcagg 131
           ||||| ||||||||||||||||||
Sbjct: 370 gcagcccaggatggccgcctcagg 393
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>emb|CT009579.20| Mouse DNA sequence from clone CH29-133M20 on chromosome 17, complete
              sequence
          Length = 219682

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     gcagcgtcgcgcccgccgcc 96
              ||||||||||||||||||||
Sbjct: 192679 gcagcgtcgcgcccgccgcc 192660
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>gb|M96853.1|RATPSD95A Rat postsynaptic density protein (PSD-95), homologue of discs-large
           tumor supressor protein mRNA, complete cds
          Length = 3083

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 108 gcagcgcaggatggccgcctcagg 131
           ||||| ||||||||||||||||||
Sbjct: 370 gcagcccaggatggccgcctcagg 393
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>dbj|D00438.1|HSBTK6 Bovine herpesvirus type 1 gene for thymidine kinase, complete cds
          Length = 1454

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   cagcgtcgcgcccgccgccc 97
            ||||||||||||||||||||
Sbjct: 1247 cagcgtcgcgcccgccgccc 1228


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,681,688
Number of Sequences: 3902068
Number of extensions: 1681688
Number of successful extensions: 39796
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39273
Number of HSP's gapped (non-prelim): 523
length of query: 284
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 262
effective length of database: 17,147,199,772
effective search space: 4492566340264
effective search space used: 4492566340264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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