ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl19f06 |
|---|---|
| Clone Library Name | barley_pub |
>K0143_HUMAN (Q14156) Protein KIAA0143 (Fragment)| Length = 885 Score = 38.9 bits (89), Expect = 0.006 Identities = 21/57 (36%), Positives = 30/57 (52%) Frame = +3 Query: 279 MCVCCPALRPSSRRPVKRYKKLLAEIFPKTPEGPPNDRKIMKLCEYAAKNPLRIPKI 449 +C CC ALRP RYK+L+ IFP+ P+ + KL YA P ++ +I Sbjct: 69 VCCCCSALRP-------RYKRLVDNIFPEDPKDGLVKTDMEKLTFYAVSAPEKLDRI 118
>HRJ97_HUMAN (Q86Y56) Heat repeats-containing protein FLJ20397| Length = 855 Score = 31.6 bits (70), Expect = 0.97 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +2 Query: 215 VGAPASEDGFHGGEAVPVVREHVRLLPGAASELAPPRQAVQEAAR 349 V AP +G EAV + R RLLPG ++ P R+ EA R Sbjct: 10 VAAPHPAEGAETAEAVELSRALSRLLPGLEADSKPGRRRALEALR 54
>CCNL1_RAT (Q9R1Q2) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)| Length = 527 Score = 30.8 bits (68), Expect = 1.7 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Frame = +3 Query: 210 LELELQPPKMGFMGAKL---------FPSCESMCVCCPALRPSSRRPVKRYKKLLAEIFP 362 LE E++ K+ AKL P+ ++ PA +PSS R VK +K I Sbjct: 300 LEKEVEKRKVALQEAKLKAKGLNLDGTPALSTLGGFSPASKPSSPREVKAEEKSPVSINV 359 Query: 363 KTPEGPPNDRKIMKLCEYAAKNP 431 KT + P DR + A+K+P Sbjct: 360 KTVKKEPEDR------QQASKSP 376
>CCNL1_MOUSE (Q52KE7) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)| Length = 532 Score = 30.8 bits (68), Expect = 1.7 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Frame = +3 Query: 210 LELELQPPKMGFMGAKL---------FPSCESMCVCCPALRPSSRRPVKRYKKLLAEIFP 362 LE E++ K+ AKL P+ ++ PA +PSS R VK +K I Sbjct: 305 LEKEVEKRKVALQEAKLKAKGLNLDGTPALSTLGGFSPASKPSSPREVKAEEKSPVSINV 364 Query: 363 KTPEGPPNDRKIMKLCEYAAKNP 431 KT + P DR + A+K+P Sbjct: 365 KTVKKEPEDR------QQASKSP 381
>CCNL1_HUMAN (Q9UK58) Cyclin-L1 (Cyclin-L)| Length = 526 Score = 30.4 bits (67), Expect = 2.2 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Frame = +3 Query: 210 LELELQPPKMGFMGAKL---------FPSCESMCVCCPALRPSSRRPVKRYKKLLAEIFP 362 LE E++ K+ AKL P+ ++ PA +PSS R VK +K I Sbjct: 299 LEKEVEKRKVALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPREVKAEEKSPISINV 358 Query: 363 KTPEGPPNDRKIMKLCEYAAKNP 431 KT + P DR + A+K+P Sbjct: 359 KTVKKEPEDR------QQASKSP 375
>HUS2_SCHPO (Q09811) ATP-dependent DNA helicase hus2/rqh1 (EC 3.6.1.-)| Length = 1328 Score = 30.0 bits (66), Expect = 2.8 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = -2 Query: 406 NFMIFLSFGGPSGVLGNISASSFLYRLTGRRELGRSAGQQTHMLSHDGNSFAP 248 N ++ L + P G+ N + + L L R+ L R + H +SH G+ F P Sbjct: 613 NVLVKLLYVTPEGLASNGAITRVLKSLYERKLLARIVIDEAHCVSHWGHDFRP 665
>GIDA_AZOSE (Q5P4J6) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 652 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +3 Query: 315 RRPVKRYKKLLAEIFPKTPEGPPNDRKIMKLCEYAAK 425 RRP RY +L++ P PE P D ++++ E AAK Sbjct: 514 RRPNTRYAELMS--LPGAPENPATDPQVIEQIEIAAK 548
>CDC45_YEAST (Q08032) Cell division control protein 45| Length = 650 Score = 29.3 bits (64), Expect = 4.8 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -2 Query: 370 GVLGNISASSFLYRLTGRRELGRSAGQQTHMLSHDGN 260 G G+ISAS F+ LT E+G S + + +++D N Sbjct: 414 GYRGSISASEFVEALTALLEVGNSTDKDSVKINNDNN 450
>VG53_BPML5 (Q05269) Gene 53 protein (Gp53)| Length = 234 Score = 29.3 bits (64), Expect = 4.8 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +2 Query: 194 WVWRLLGVGAPASEDGFHGGEAVPVVREHVR-LLPGAA 304 WVW L + + H GEAV VR VR +L GAA Sbjct: 34 WVWYLESPYIQKTLESLHRGEAVHYVRNQVRNILSGAA 71
>BAI1_HUMAN (O14514) Brain-specific angiogenesis inhibitor 1 precursor| Length = 1584 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -3 Query: 69 LGQESPGMAETGGWGILVCWGEC 1 L Q+ G TGGW + WGEC Sbjct: 251 LTQDRGGHGATGGWKLWSLWGEC 273
>MTNP_LEPIN (Q8CXR2) Probable 5'-methylthioadenosine phosphorylase (EC| 2.4.2.28) (MTA phosphorylase) Length = 287 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +3 Query: 339 KLLAEIFPKTPEGPPNDRKIMKLCEYAAKNPLRIPK 446 +L+ EIFP TP G P+D+ +K+ +Y K +P+ Sbjct: 22 ELIEEIFPDTPWGKPSDK--IKIGKYKGKLIAFLPR 55
>MTNP_LEPIC (Q72LZ4) Probable 5'-methylthioadenosine phosphorylase (EC| 2.4.2.28) (MTA phosphorylase) Length = 287 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +3 Query: 339 KLLAEIFPKTPEGPPNDRKIMKLCEYAAKNPLRIPK 446 +L+ EIFP TP G P+D+ +K+ +Y K +P+ Sbjct: 22 ELIEEIFPDTPWGKPSDK--IKIGKYKGKLIAFLPR 55
>EMID2_MOUSE (Q91VF6) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 440 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = +3 Query: 240 GFMGAKLFPSCESMCVCCPALRPSSRRPVKRYKKLLAEIFPKTPEGPPND 389 GF G+ +CE C+ C L S R K+L + P GP ND Sbjct: 120 GFTGS----NCEEECMNCTRLSDMSERLTTLEAKVLLLEAAEQPSGPDND 165 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,376,717 Number of Sequences: 219361 Number of extensions: 1077885 Number of successful extensions: 3604 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3471 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3601 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
