ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl19e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PATL2_ARATH (Q56ZI2) Patellin-2 33 0.18
2DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC... 30 1.5
3FIBP_ADE02 (P03275) Fiber protein (pIV) 30 1.5
4CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) ... 30 2.0
5MUC1_YEAST (P08640) Mucin-like protein 1 precursor 29 3.4
6AMOT_HUMAN (Q4VCS5) Angiomotin 29 3.4
7PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ... 28 4.5
8Y220_SILPO (Q5LX20) UPF0247 protein SPO0220 28 5.9
9FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1 28 5.9
10CANT1_HUMAN (Q8WVQ1) Soluble calcium-activated nucleotidase 1 (E... 28 7.7

>PATL2_ARATH (Q56ZI2) Patellin-2|
          Length = 683

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 25/94 (26%), Positives = 36/94 (38%)
 Frame = -2

Query: 284 VEVAPVAPLTACTGAVEVAPVAPLTARTGALEXXXXXXXXXXXXXXVHRKEKEEG*RVAT 105
           VE  P AP+ A T   E+ P AP+T  T   E                 KE+E+   V T
Sbjct: 197 VETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVTTETKEEEKAAPVTT 256

Query: 104 VEDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 3
              +  + +      E      A   TQ++R +K
Sbjct: 257 ETKEEEKAAPGETKKE----EKATASTQVKRASK 286



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>DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC 3.1.3.48) (EC|
           3.1.3.16)
          Length = 295

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 17  LAACVWRLQA--IREARGRPARHCRGQRRLRQSPLVTPPP 130
           LAA V  L A  +REA GR A+ CR   R     L+ PPP
Sbjct: 166 LAARVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPP 205



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>FIBP_ADE02 (P03275) Fiber protein (pIV)|
          Length = 582

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -2

Query: 293 TGAVEVAPVAPLTACTGAVEVAPVAPLTARTGAL 192
           +GA+ VA  APL   +GA+ V   APLT +   L
Sbjct: 109 SGALTVATTAPLIVTSGALSVQSQAPLTVQDSKL 142



 Score = 29.3 bits (64), Expect = 2.6
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 266 APLTACTGAVEVAPVAPLTARTGAL 192
           APLT  +GA+ VA  APL   +GAL
Sbjct: 103 APLTITSGALTVATTAPLIVTSGAL 127



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>CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)|
           (Carboxypeptidase H) (CPH) (Enkephalin convertase)
           (Prohormone-processing carboxypeptidase)
          Length = 476

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 14  SLAACVWRLQAIREARGRPARHCRGQRRLRQ 106
           +LAAC W L A  +  G PA   R +RRL+Q
Sbjct: 15  ALAACGWLLGAEAQEPGAPAAGMRRRRRLQQ 45



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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +1

Query: 73  APLPRPASSSTVATRHPSSFSFRXXXXXXXXXXXXXXXXSRAP 201
           AP+P P+SSS + +  PSS  F                 S+ P
Sbjct: 864 APVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYP 906



 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 1/85 (1%)
 Frame = +1

Query: 55  SSRPAGAPLPRPASSSTVATRHP-SSFSFRXXXXXXXXXXXXXXXXSRAPVRAVXXXXXX 231
           ++  + AP+P P+SS+T ++  P +S +                  S APV         
Sbjct: 546 TTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE 605

Query: 232 XXXXPVHAVXXXXXXXXXXPVRAAT 306
               P              PV ++T
Sbjct: 606 SSSAPAPTPSSSTTESSSAPVTSST 630



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>AMOT_HUMAN (Q4VCS5) Angiomotin|
          Length = 1084

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -2

Query: 305  VAARTGAVEVAPVAPLTACTGAVEVAPVAPLTARTGAL 192
            + A       A VAP  A   AV+VAP AP      AL
Sbjct: 947  IPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPAL 984



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>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 10/37 (27%)
 Frame = -2

Query: 113 VATVEDDAGRGSGAPA----------GLELHVLPAAA 33
           +A+V D  GRG G PA          GL L+++PAAA
Sbjct: 17  IASVRDGRGRGCGGPAGAALLGLSLVGLLLYLVPAAA 53



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>Y220_SILPO (Q5LX20) UPF0247 protein SPO0220|
          Length = 156

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -2

Query: 116 RVATVEDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 3
           RV  VED    G GA A L    LPA A    L+ + K
Sbjct: 40  RVVEVEDKKNAGMGAEAALLRKALPAGAVLCTLDERGK 77



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>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1|
          Length = 959

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 55  SSRPAGAPLPRPASSSTVATRHPSSFS 135
           +++PA  P+P PA++   AT+ PSS S
Sbjct: 207 AAQPAPVPVPAPAATPKAATQAPSSRS 233



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>CANT1_HUMAN (Q8WVQ1) Soluble calcium-activated nucleotidase 1 (EC 3.6.1.6)|
           (SCAN-1) (Apyrase homolog) (Putative
           NF-kappa-B-activating protein 107) (Putative
           MAPK-activating protein PM09)
          Length = 401

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 2   LSFSSLAACVWRLQAIREARGRPARHCRGQRRLRQSP 112
           L+F   AA +W L + R A GRP  H     RL Q+P
Sbjct: 47  LTFFVGAAILWLLCSHRPAPGRPPTHNAHNWRLGQAP 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,164,709
Number of Sequences: 219361
Number of extensions: 353875
Number of successful extensions: 1806
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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