Clone Name | bastl19e10 |
---|---|
Clone Library Name | barley_pub |
>PATL2_ARATH (Q56ZI2) Patellin-2| Length = 683 Score = 33.1 bits (74), Expect = 0.18 Identities = 25/94 (26%), Positives = 36/94 (38%) Frame = -2 Query: 284 VEVAPVAPLTACTGAVEVAPVAPLTARTGALEXXXXXXXXXXXXXXVHRKEKEEG*RVAT 105 VE P AP+ A T E+ P AP+T T E KE+E+ V T Sbjct: 197 VETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVTTETKEEEKAAPVTT 256 Query: 104 VEDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 3 + + + E A TQ++R +K Sbjct: 257 ETKEEEKAAPGETKKE----EKATASTQVKRASK 286
>DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC 3.1.3.48) (EC| 3.1.3.16) Length = 295 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = +2 Query: 17 LAACVWRLQA--IREARGRPARHCRGQRRLRQSPLVTPPP 130 LAA V L A +REA GR A+ CR R L+ PPP Sbjct: 166 LAARVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPP 205
>FIBP_ADE02 (P03275) Fiber protein (pIV)| Length = 582 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -2 Query: 293 TGAVEVAPVAPLTACTGAVEVAPVAPLTARTGAL 192 +GA+ VA APL +GA+ V APLT + L Sbjct: 109 SGALTVATTAPLIVTSGALSVQSQAPLTVQDSKL 142 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -2 Query: 266 APLTACTGAVEVAPVAPLTARTGAL 192 APLT +GA+ VA APL +GAL Sbjct: 103 APLTITSGALTVATTAPLIVTSGAL 127
>CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)| (Carboxypeptidase H) (CPH) (Enkephalin convertase) (Prohormone-processing carboxypeptidase) Length = 476 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +2 Query: 14 SLAACVWRLQAIREARGRPARHCRGQRRLRQ 106 +LAAC W L A + G PA R +RRL+Q Sbjct: 15 ALAACGWLLGAEAQEPGAPAAGMRRRRRLQQ 45
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/43 (30%), Positives = 18/43 (41%) Frame = +1 Query: 73 APLPRPASSSTVATRHPSSFSFRXXXXXXXXXXXXXXXXSRAP 201 AP+P P+SSS + + PSS F S+ P Sbjct: 864 APVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYP 906 Score = 27.7 bits (60), Expect = 7.7 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 1/85 (1%) Frame = +1 Query: 55 SSRPAGAPLPRPASSSTVATRHP-SSFSFRXXXXXXXXXXXXXXXXSRAPVRAVXXXXXX 231 ++ + AP+P P+SS+T ++ P +S + S APV Sbjct: 546 TTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE 605 Query: 232 XXXXPVHAVXXXXXXXXXXPVRAAT 306 P PV ++T Sbjct: 606 SSSAPAPTPSSSTTESSSAPVTSST 630
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = -2 Query: 305 VAARTGAVEVAPVAPLTACTGAVEVAPVAPLTARTGAL 192 + A A VAP A AV+VAP AP AL Sbjct: 947 IPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPAL 984
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 10/37 (27%) Frame = -2 Query: 113 VATVEDDAGRGSGAPA----------GLELHVLPAAA 33 +A+V D GRG G PA GL L+++PAAA Sbjct: 17 IASVRDGRGRGCGGPAGAALLGLSLVGLLLYLVPAAA 53
>Y220_SILPO (Q5LX20) UPF0247 protein SPO0220| Length = 156 Score = 28.1 bits (61), Expect = 5.9 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -2 Query: 116 RVATVEDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 3 RV VED G GA A L LPA A L+ + K Sbjct: 40 RVVEVEDKKNAGMGAEAALLRKALPAGAVLCTLDERGK 77
>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1| Length = 959 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 55 SSRPAGAPLPRPASSSTVATRHPSSFS 135 +++PA P+P PA++ AT+ PSS S Sbjct: 207 AAQPAPVPVPAPAATPKAATQAPSSRS 233
>CANT1_HUMAN (Q8WVQ1) Soluble calcium-activated nucleotidase 1 (EC 3.6.1.6)| (SCAN-1) (Apyrase homolog) (Putative NF-kappa-B-activating protein 107) (Putative MAPK-activating protein PM09) Length = 401 Score = 27.7 bits (60), Expect = 7.7 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +2 Query: 2 LSFSSLAACVWRLQAIREARGRPARHCRGQRRLRQSP 112 L+F AA +W L + R A GRP H RL Q+P Sbjct: 47 LTFFVGAAILWLLCSHRPAPGRPPTHNAHNWRLGQAP 83 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,164,709 Number of Sequences: 219361 Number of extensions: 353875 Number of successful extensions: 1806 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1792 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)