ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl19e10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 gcgcgccactgccgcggccagcg 93 ||||||||||||||||||||||| Sbjct: 4060472 gcgcgccactgccgcggccagcg 4060494
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Minus Query: 71 gcgcgccactgccgcggccagcg 93 ||||||||||||||||||||||| Sbjct: 1211146 gcgcgccactgccgcggccagcg 1211124
>gb|AE011989.1| Xanthomonas axonopodis pv. citri str. 306, section 367 of 469 of the complete genome Length = 11053 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 gcgcgccactgccgcggccagcg 93 ||||||||||||||||||||||| Sbjct: 1311 gcgcgccactgccgcggccagcg 1333
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Minus Query: 71 gcgcgccactgccgcggccagcg 93 ||||||||||||||||||||||| Sbjct: 1244691 gcgcgccactgccgcggccagcg 1244669
>ref|XM_746906.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g08270) partial mRNA Length = 1005 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 211 gtgagcggggcgacaggcgcga 232 |||||||||||||||||||||| Sbjct: 352 gtgagcggggcgacaggcgcga 331 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 gtgagcggggcgacaggcgcga 277 |||||||||||||||||||||| Sbjct: 352 gtgagcggggcgacaggcgcga 331
>emb|AL136110.17| Human DNA sequence from clone RP3-479G13 on chromosome 6 Contains part of the AKAP7 gene for A kinase (PRKA) anchor protein 7, complete sequence Length = 71179 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 cacccctcctccttctccttc 138 ||||||||||||||||||||| Sbjct: 54697 cacccctcctccttctccttc 54677
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 acccctcctccttctccttcc 139 ||||||||||||||||||||| Sbjct: 14496065 acccctcctccttctccttcc 14496045
>gb|AC025906.2|AC025906 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0075H14, complete sequence Length = 155420 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 acccctcctccttctccttcc 139 ||||||||||||||||||||| Sbjct: 110428 acccctcctccttctccttcc 110408
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 tgcgacggcggcgacctgggc 170 ||||||||||||||||||||| Sbjct: 3950998 tgcgacggcggcgacctgggc 3950978
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcgcgacctcgacggcgcccg 247 ||||||||||||||||||||| Sbjct: 1646380 gcgcgacctcgacggcgcccg 1646400 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggcgcgccactgccgcggccagcg 93 ||||||||||||||||| |||||| Sbjct: 3757805 ggcgcgccactgccgcgcccagcg 3757828
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 acccctcctccttctccttcc 139 ||||||||||||||||||||| Sbjct: 14504307 acccctcctccttctccttcc 14504287
>ref|NM_188721.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1380 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ggacctgtgcgacggcggcg 162 |||||||||||||||||||| Sbjct: 681 ggacctgtgcgacggcggcg 700
>gb|AC163358.3| Mus musculus BAC clone RP23-11M14 from chromosome 14, complete sequence Length = 208634 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 622 cccctcctccttctccttcc 641
>ref|XM_465930.1| Oryza sativa (japonica cultivar-group), mRNA Length = 663 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 426 cccctcctccttctccttcc 407
>gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, complete sequence Length = 184327 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 150628 cccctcctccttctccttcc 150609
>gb|AC140208.2| Mus musculus BAC clone RP24-469B21 from chromosome 14, complete sequence Length = 200350 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 184620 cccctcctccttctccttcc 184639
>gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, complete sequence Length = 215696 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 98182 cccctcctccttctccttcc 98201
>gb|AC115843.10| Mus musculus chromosome 9, clone RP24-239P6, complete sequence Length = 215265 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 86181 cccctcctccttctccttcc 86200
>gb|AC124688.3| Mus musculus BAC clone RP24-484D9 from chromosome 14, complete sequence Length = 141678 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 6135 cccctcctccttctccttcc 6154
>gb|AC122252.4| Mus musculus BAC clone RP23-170E7 from chromosome 17, complete sequence Length = 219695 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 119653 cccctcctccttctccttcc 119672
>gb|AC123819.2| Mus musculus BAC clone RP23-460M11 from chromosome 8, complete sequence Length = 202899 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 122427 cccctcctccttctccttcc 122446
>gb|AC121824.2| Mus musculus BAC clone RP23-467P15 from 18, complete sequence Length = 195027 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 76985 cccctcctccttctccttcc 76966
>gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, complete sequence Length = 198636 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 198258 cccctcctccttctccttcc 198277
>gb|AC069564.34| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435n13, complete sequence Length = 185784 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 215 cccctcctccttctccttcc 196
>gb|AC100953.12| Mus musculus chromosome 5, clone RP23-73P16, complete sequence Length = 216490 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tcacccctcctccttctcct 136 |||||||||||||||||||| Sbjct: 78807 tcacccctcctccttctcct 78826
>gb|BC098889.1| Danio rerio telomeric repeat binding factor a, mRNA (cDNA clone MGC:114011 IMAGE:2601225), complete cds Length = 1910 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 1361 gtgtgtgtggcggctgcagg 1342
>emb|AL590302.6| Human DNA sequence from clone RP11-252P19 on chromosome 6 Contains 2 novel genes and 3 CpG islands, complete sequence Length = 105898 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 6965 cccctcctccttctccttcc 6946
>emb|AL365502.57| Human DNA sequence from clone RP11-48C7 on chromosome 9q34.2-34.3 Contains the gene for nasal embryonic luteinizing hormone-releasing hormone factor (DKFZP586J1624), a novel gene (FLJ31318), the MRPL41 gene for mitochondrial ribosomal protein L41 (RPML27, MRP-L270), a novel gene (LOC9271), the gene for melanin-concentrating hormone receptor 1 interacting zinc-finger protein (ZMYND17) (MIZIP), a novel gene (MGC40555), a novel protein and eleven CpG islands, complete sequence Length = 174995 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 58239 cccctcctccttctccttcc 58220 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 58201 cccctcctccttctccttcc 58182 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 58182 cccctcctccttctccttcc 58163 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 58163 cccctcctccttctccttcc 58144
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gcgacctcgacagcgcccgt 293 |||||||||||||||||||| Sbjct: 1307899 gcgacctcgacagcgcccgt 1307918
>emb|AL138834.28| Human DNA sequence from clone RP11-113A10 on chromosome 9 Contains three seven transmembrane helix receptor pseudogenes, a pseudogene similar to part of a seven transmembrane helix receptor, the RECK gene for reversion-inducing-cysteine-rich protein with kazal motifs (ST15, hRECK) and a CpG island, complete sequence Length = 123413 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 acccctcctccttctccttc 138 |||||||||||||||||||| Sbjct: 33044 acccctcctccttctccttc 33063
>emb|AL078477.5|HSDJ259N9 Human DNA sequence from clone RP1-69B10 on chromosome 11p13 Contains a pseudogene similar to heterogeneous nuclear ribonucleoprotein, the gene for GA17 protein, ESTs, STSs, GSSs and a CpG island, complete sequence Length = 107652 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 45357 cccctcctccttctccttcc 45376
>ref|XM_795107.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC582888 (LOC582888), mRNA Length = 973 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cctcctccttctccttccgatgga 145 ||||||||| |||||||||||||| Sbjct: 479 cctcctcctcctccttccgatgga 456
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ccggcgcgacctcgagagcg 198 |||||||||||||||||||| Sbjct: 139665 ccggcgcgacctcgagagcg 139684
>gb|BC096857.1| Danio rerio telomeric repeat binding factor a, mRNA (cDNA clone MGC:111909 IMAGE:7221992), complete cds Length = 1876 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 1343 gtgtgtgtggcggctgcagg 1324
>gb|AC160936.2| Mus musculus BAC clone RP23-300E17 from chromosome 12, complete sequence Length = 198897 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 15085 cccctcctccttctccttcc 15104
>gb|AE005766.1| Caulobacter crescentus CB15 section 92 of 359 of the complete genome Length = 10091 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcgaccggcgcgacctcga 193 |||||||||||||||||||| Sbjct: 8079 ggcgaccggcgcgacctcga 8060
>gb|AC160561.2| Mus musculus BAC clone RP23-102D22 from chromosome 12, complete sequence Length = 204231 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 134044 cccctcctccttctccttcc 134063
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 4.0 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 137 tccgatggacctgt--gcgacggcggcgacc 165 |||||||||||||| ||||||||||||||| Sbjct: 1796300 tccgatggacctgtgggcgacggcggcgacc 1796270
>gb|AF072135.1|AF072135 Caulobacter crescentus hook associated protein I homolog (flaN), flagellar operon, complete sequence and II.1 protein (II.1) genes, complete cds Length = 6943 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcgaccggcgcgacctcga 193 |||||||||||||||||||| Sbjct: 2389 ggcgaccggcgcgacctcga 2370
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 18370251 cccctcctccttctccttcc 18370270
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ggacctgtgcgacggcggcg 162 |||||||||||||||||||| Sbjct: 7847980 ggacctgtgcgacggcggcg 7847999
>dbj|D78345.1| Homo sapiens DNA, gamma gene loci of immunoglobulin heavy chains Length = 21013 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 11385 gtgtgtgtggcggctgcagg 11366
>gb|AC087653.6| Homo sapiens chromosome 11, clone RP1-259N9, complete sequence Length = 138141 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 686 cccctcctccttctccttcc 705
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ggacctgtgcgacggcggcg 162 |||||||||||||||||||| Sbjct: 42926 ggacctgtgcgacggcggcg 42945
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 33175 cccctcctccttctccttcc 33194
>emb|AL928742.3|CNS08CBF Human chromosome 14 DNA sequence BAC R-731F5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176237 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 34140 gtgtgtgtggcggctgcagg 34121 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 15413 gtgtgtgtggcggctgcagg 15394
>emb|AL122127.6|CNS01DT2 Human chromosome 14 DNA sequence BAC R-417P24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169802 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 38357 gtgtgtgtggcggctgcagg 38376 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 10593 gtgtgtgtggcggctgcagg 10612
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14 Length = 1279711 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 1199641 gtgtgtgtggcggctgcagg 1199622 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 1180914 gtgtgtgtggcggctgcagg 1180895 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 1155873 gtgtgtgtggcggctgcagg 1155854 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 1082645 gtgtgtgtggcggctgcagg 1082626 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 1054881 gtgtgtgtggcggctgcagg 1054862
>emb|CR956421.19| Pig DNA sequence from clone PigE-225A14 on chromosome 6, complete sequence Length = 127959 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 3594 cccctcctccttctccttcc 3613
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 aagctcgaggccggccggcgcgcc 77 |||||||| ||||||||||||||| Sbjct: 1705856 aagctcgatgccggccggcgcgcc 1705833
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ggcgcgacctcgacggcgcc 245 |||||||||||||||||||| Sbjct: 3160808 ggcgcgacctcgacggcgcc 3160789
>emb|AL844560.5| Mouse DNA sequence from clone RP23-334M9 on chromosome 2, complete sequence Length = 185066 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 106517 cccctcctccttctccttcc 106498
>gb|AC151735.3| Mus musculus BAC clone RP23-24D16 from 9, complete sequence Length = 201762 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 25652 cccctcctccttctccttcc 25671
>gb|AC154382.1| Mus musculus BAC clone RP23-51D17 from 13, complete sequence Length = 180348 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 113360 cccctcctccttctccttcc 113379
>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence Length = 225973 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cccctcctccttctccttcc 139 |||||||||||||||||||| Sbjct: 147861 cccctcctccttctccttcc 147880
>emb|Z17370.1|HSIGG1CP H.sapiens germline immunoglobulin gamma1 chain constant region gene Length = 2802 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 2726 gtgtgtgtggcggctgcagg 2707
>emb|AL928761.2|CNS08CBY Human chromosome 14 DNA sequence Partial sequence from library PCR product from genomic DNA from chromosome 14 of Homo sapiens (Human), complete sequence Length = 13616 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gtgtgtgtggcggctgcagg 44 |||||||||||||||||||| Sbjct: 1839 gtgtgtgtggcggctgcagg 1820 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,338,967 Number of Sequences: 3902068 Number of extensions: 2338967 Number of successful extensions: 83879 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 82494 Number of HSP's gapped (non-prelim): 1415 length of query: 306 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 284 effective length of database: 17,147,199,772 effective search space: 4869804735248 effective search space used: 4869804735248 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
