ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl19e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506339.1| PREDICTED Oryza sativa (japonica cultivar-group... 178 1e-41
2ref|XM_478107.1| Oryza sativa (japonica cultivar-group), mRNA 178 1e-41
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
4dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
5dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
6dbj|AK122057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
7dbj|AK067097.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
8dbj|AK064915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
9gb|DQ005950.1| Populus nigra isolate A7 matrix attachment region... 76 1e-10
10ref|NM_117230.3| Arabidopsis thaliana NTRB AT4G11610 (NTRB) mRNA... 50 0.007
11emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, ... 50 0.007
12emb|AL049500.1|ATT5C23 Arabidopsis thaliana DNA chromosome 4, BA... 50 0.007
13gb|BT008593.1| Arabidopsis thaliana clone U50176 unknown protein... 50 0.007
14gb|BT005726.1| Arabidopsis thaliana clone RAFL16-03-J03 (R50176)... 50 0.007
15ref|NM_115994.3| Arabidopsis thaliana unknown protein AT3G61300 ... 44 0.40
16emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, B... 44 0.40
17gb|BT005687.1| Arabidopsis thaliana clone U50017 putative anthra... 44 0.40
18gb|BT003856.1| Arabidopsis thaliana clone RAFL16-03-I12 (R50017)... 44 0.40
19gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 1.6
20ref|XM_474407.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
21gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complet... 40 6.3
22emb|BX677666.17| Zebrafish DNA sequence from clone DKEY-58B18 in... 40 6.3
23emb|BX649335.8| Zebrafish DNA sequence from clone DKEY-24C2 in l... 40 6.3
24gb|AF282469.1| Eyach virus segment 3, complete sequence 40 6.3
25ref|XM_684474.1| PREDICTED: Danio rerio similar to chromodomain ... 40 6.3
26gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, re... 40 6.3
27dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
28gb|AC009241.4| Homo sapiens BAC clone RP11-542O24 from 2, comple... 40 6.3
29dbj|AK102910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
30dbj|AK073897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
31emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.3
32gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 ... 40 6.3
33emb|AL358334.3|CNS05TE5 Human chromosome 14 DNA sequence BAC R-2... 40 6.3
34emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 40 6.3 
>ref|XM_506339.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_F08.109
           mRNA
          Length = 3486

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Plus

                                                                       
Query: 233 aagcttggcgttgaggttgtcagtgctcatggcctcctccctaaagagcagggcactgcc 292
           |||||||| || ||||||  ||||||||||| |||||| || ||||||||||||||   |
Sbjct: 326 aagcttggggtggaggttaccagtgctcatgacctcctaccaaaagagcagggcacatgc 385

                                                                       
Query: 293 aatgcctttgtagagcttgaatttgatggccagaagttccgcacggccatcaaagatagc 352
           ||  ||| ||| ||| | ||||| |||| ||||||||||||||| ||||||||||| || 
Sbjct: 386 aacccctatgtcgagatcgaattcgatgaccagaagttccgcacagccatcaaagagagg 445

                                                                       
Query: 353 gacatcagccctgtctggaacgagcagttcttcttcaacatatcagatccatctcgcctc 412
           || |||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 446 gatatcaaccctgtctggaacgagcagttctacttcaacatatctgatccatcccgcctc 505

                                                             
Query: 413 ctagagaaagagcttcaggcctatgtgtaccatgcaaaccgcgtcagcaa 462
              |||||||| ||  |||| ||||||||||| |||||||||| ||||||
Sbjct: 506 actgagaaagacctcgaggcgtatgtgtaccacgcaaaccgcgccagcaa 555
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>ref|XM_478107.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3402

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Plus

                                                                       
Query: 233 aagcttggcgttgaggttgtcagtgctcatggcctcctccctaaagagcagggcactgcc 292
           |||||||| || ||||||  ||||||||||| |||||| || ||||||||||||||   |
Sbjct: 207 aagcttggggtggaggttaccagtgctcatgacctcctaccaaaagagcagggcacatgc 266

                                                                       
Query: 293 aatgcctttgtagagcttgaatttgatggccagaagttccgcacggccatcaaagatagc 352
           ||  ||| ||| ||| | ||||| |||| ||||||||||||||| ||||||||||| || 
Sbjct: 267 aacccctatgtcgagatcgaattcgatgaccagaagttccgcacagccatcaaagagagg 326

                                                                       
Query: 353 gacatcagccctgtctggaacgagcagttcttcttcaacatatcagatccatctcgcctc 412
           || |||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 327 gatatcaaccctgtctggaacgagcagttctacttcaacatatctgatccatcccgcctc 386

                                                             
Query: 413 ctagagaaagagcttcaggcctatgtgtaccatgcaaaccgcgtcagcaa 462
              |||||||| ||  |||| ||||||||||| |||||||||| ||||||
Sbjct: 387 actgagaaagacctcgaggcgtatgtgtaccacgcaaaccgcgccagcaa 436
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Minus

                                                                            
Query: 233      aagcttggcgttgaggttgtcagtgctcatggcctcctccctaaagagcagggcactgcc 292
                |||||||| || ||||||  ||||||||||| |||||| || ||||||||||||||   |
Sbjct: 17636773 aagcttggggtggaggttaccagtgctcatgacctcctaccaaaagagcagggcacatgc 17636714

                                                                            
Query: 293      aatgcctttgtagagcttgaatttgatggccagaagttccgcacggccatcaaagatagc 352
                ||  ||| ||| ||| | ||||| |||| ||||||||||||||| ||||||||||| || 
Sbjct: 17636713 aacccctatgtcgagatcgaattcgatgaccagaagttccgcacagccatcaaagagagg 17636654

                                                                            
Query: 353      gacatcagccctgtctggaacgagcagttcttcttcaacatatcagatccatctcgcctc 412
                || |||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 17636653 gatatcaaccctgtctggaacgagcagttctacttcaacatatctgatccatcccgcctc 17636594

                                                                  
Query: 413      ctagagaaagagcttcaggcctatgtgtaccatgcaaaccgcgtcagcaa 462
                   |||||||| ||  |||| ||||||||||| |||||||||| ||||||
Sbjct: 17636593 actgagaaagacctcgaggcgtatgtgtaccacgcaaaccgcgccagcaa 17636544
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>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_F08
          Length = 134988

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Minus

                                                                         
Query: 233   aagcttggcgttgaggttgtcagtgctcatggcctcctccctaaagagcagggcactgcc 292
             |||||||| || ||||||  ||||||||||| |||||| || ||||||||||||||   |
Sbjct: 40806 aagcttggggtggaggttaccagtgctcatgacctcctaccaaaagagcagggcacatgc 40747

                                                                         
Query: 293   aatgcctttgtagagcttgaatttgatggccagaagttccgcacggccatcaaagatagc 352
             ||  ||| ||| ||| | ||||| |||| ||||||||||||||| ||||||||||| || 
Sbjct: 40746 aacccctatgtcgagatcgaattcgatgaccagaagttccgcacagccatcaaagagagg 40687

                                                                         
Query: 353   gacatcagccctgtctggaacgagcagttcttcttcaacatatcagatccatctcgcctc 412
             || |||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 40686 gatatcaaccctgtctggaacgagcagttctacttcaacatatctgatccatcccgcctc 40627

                                                               
Query: 413   ctagagaaagagcttcaggcctatgtgtaccatgcaaaccgcgtcagcaa 462
                |||||||| ||  |||| ||||||||||| |||||||||| ||||||
Sbjct: 40626 actgagaaagacctcgaggcgtatgtgtaccacgcaaaccgcgccagcaa 40577
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>dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0045A07
          Length = 174165

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Minus

                                                                          
Query: 233    aagcttggcgttgaggttgtcagtgctcatggcctcctccctaaagagcagggcactgcc 292
              |||||||| || ||||||  ||||||||||| |||||| || ||||||||||||||   |
Sbjct: 164722 aagcttggggtggaggttaccagtgctcatgacctcctaccaaaagagcagggcacatgc 164663

                                                                          
Query: 293    aatgcctttgtagagcttgaatttgatggccagaagttccgcacggccatcaaagatagc 352
              ||  ||| ||| ||| | ||||| |||| ||||||||||||||| ||||||||||| || 
Sbjct: 164662 aacccctatgtcgagatcgaattcgatgaccagaagttccgcacagccatcaaagagagg 164603

                                                                          
Query: 353    gacatcagccctgtctggaacgagcagttcttcttcaacatatcagatccatctcgcctc 412
              || |||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 164602 gatatcaaccctgtctggaacgagcagttctacttcaacatatctgatccatcccgcctc 164543

                                                                
Query: 413    ctagagaaagagcttcaggcctatgtgtaccatgcaaaccgcgtcagcaa 462
                 |||||||| ||  |||| ||||||||||| |||||||||| ||||||
Sbjct: 164542 actgagaaagacctcgaggcgtatgtgtaccacgcaaaccgcgccagcaa 164493
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>dbj|AK122057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114M07, full
           insert sequence
          Length = 3592

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Plus

                                                                       
Query: 233 aagcttggcgttgaggttgtcagtgctcatggcctcctccctaaagagcagggcactgcc 292
           |||||||| || ||||||  ||||||||||| |||||| || ||||||||||||||   |
Sbjct: 391 aagcttggggtggaggttaccagtgctcatgacctcctaccaaaagagcagggcacatgc 450

                                                                       
Query: 293 aatgcctttgtagagcttgaatttgatggccagaagttccgcacggccatcaaagatagc 352
           ||  ||| ||| ||| | ||||| |||| ||||||||||||||| ||||||||||| || 
Sbjct: 451 aacccctatgtcgagatcgaattcgatgaccagaagttccgcacagccatcaaagagagg 510

                                                                       
Query: 353 gacatcagccctgtctggaacgagcagttcttcttcaacatatcagatccatctcgcctc 412
           || |||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 511 gatatcaaccctgtctggaacgagcagttctacttcaacatatctgatccatcccgcctc 570

                                                             
Query: 413 ctagagaaagagcttcaggcctatgtgtaccatgcaaaccgcgtcagcaa 462
              |||||||| ||  |||| ||||||||||| |||||||||| ||||||
Sbjct: 571 actgagaaagacctcgaggcgtatgtgtaccacgcaaaccgcgccagcaa 620
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>dbj|AK067097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095C11, full
           insert sequence
          Length = 3402

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Plus

                                                                       
Query: 233 aagcttggcgttgaggttgtcagtgctcatggcctcctccctaaagagcagggcactgcc 292
           |||||||| || ||||||  ||||||||||| |||||| || ||||||||||||||   |
Sbjct: 207 aagcttggggtggaggttaccagtgctcatgacctcctaccaaaagagcagggcacatgc 266

                                                                       
Query: 293 aatgcctttgtagagcttgaatttgatggccagaagttccgcacggccatcaaagatagc 352
           ||  ||| ||| ||| | ||||| |||| ||||||||||||||| ||||||||||| || 
Sbjct: 267 aacccctatgtcgagatcgaattcgatgaccagaagttccgcacagccatcaaagagagg 326

                                                                       
Query: 353 gacatcagccctgtctggaacgagcagttcttcttcaacatatcagatccatctcgcctc 412
           || |||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 327 gatatcaaccctgtctggaacgagcagttctacttcaacatatctgatccatcccgcctc 386

                                                             
Query: 413 ctagagaaagagcttcaggcctatgtgtaccatgcaaaccgcgtcagcaa 462
              |||||||| ||  |||| ||||||||||| |||||||||| ||||||
Sbjct: 387 actgagaaagacctcgaggcgtatgtgtaccacgcaaaccgcgccagcaa 436
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>dbj|AK064915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M15, full
           insert sequence
          Length = 3486

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Plus

                                                                       
Query: 233 aagcttggcgttgaggttgtcagtgctcatggcctcctccctaaagagcagggcactgcc 292
           |||||||| || ||||||  ||||||||||| |||||| || ||||||||||||||   |
Sbjct: 326 aagcttggggtggaggttaccagtgctcatgacctcctaccaaaagagcagggcacatgc 385

                                                                       
Query: 293 aatgcctttgtagagcttgaatttgatggccagaagttccgcacggccatcaaagatagc 352
           ||  ||| ||| ||| | ||||| |||| ||||||||||||||| ||||||||||| || 
Sbjct: 386 aacccctatgtcgagatcgaattcgatgaccagaagttccgcacagccatcaaagagagg 445

                                                                       
Query: 353 gacatcagccctgtctggaacgagcagttcttcttcaacatatcagatccatctcgcctc 412
           || |||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 446 gatatcaaccctgtctggaacgagcagttctacttcaacatatctgatccatcccgcctc 505

                                                             
Query: 413 ctagagaaagagcttcaggcctatgtgtaccatgcaaaccgcgtcagcaa 462
              |||||||| ||  |||| ||||||||||| |||||||||| ||||||
Sbjct: 506 agtgagaaagacctcgaggcgtatgtgtaccacgcaaaccgcgccagcaa 555
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>gb|DQ005950.1| Populus nigra isolate A7 matrix attachment region sequence
          Length = 884

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 295 tgcctttgtagagcttgaatttgatggccagaagttccgcacggccatcaaaga 348
           ||||||||||||||| || ||||||||||||| |||||||||| ||||||||||
Sbjct: 676 tgcctttgtagagctcgactttgatggccagaggttccgcacgaccatcaaaga 729
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>ref|NM_117230.3| Arabidopsis thaliana NTRB AT4G11610 (NTRB) mRNA, complete cds
          Length = 3466

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 380 ttcttcttcaacatatcagatccatctcg 408
           |||||||||||||| ||||||||||||||
Sbjct: 372 ttcttcttcaacatctcagatccatctcg 400
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>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32
          Length = 198788

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 380   ttcttcttcaacatatcagatccatctcg 408
             |||||||||||||| ||||||||||||||
Sbjct: 68613 ttcttcttcaacatctcagatccatctcg 68585
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>emb|AL049500.1|ATT5C23 Arabidopsis thaliana DNA chromosome 4, BAC clone T5C23 (ESSA project)
          Length = 87104

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 380   ttcttcttcaacatatcagatccatctcg 408
             |||||||||||||| ||||||||||||||
Sbjct: 11449 ttcttcttcaacatctcagatccatctcg 11421
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>gb|BT008593.1| Arabidopsis thaliana clone U50176 unknown protein (At4g11620) mRNA,
           complete cds
          Length = 3067

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 380 ttcttcttcaacatatcagatccatctcg 408
           |||||||||||||| ||||||||||||||
Sbjct: 169 ttcttcttcaacatctcagatccatctcg 197
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>gb|BT005726.1| Arabidopsis thaliana clone RAFL16-03-J03 (R50176) unknown protein
           (At4g11620) mRNA, complete cds
          Length = 3385

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 380 ttcttcttcaacatatcagatccatctcg 408
           |||||||||||||| ||||||||||||||
Sbjct: 372 ttcttcttcaacatctcagatccatctcg 400
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>ref|NM_115994.3| Arabidopsis thaliana unknown protein AT3G61300 mRNA, complete cds
          Length = 3434

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 368 tggaacgagcagttcttcttcaacat 393
           ||||||||| ||||||||||||||||
Sbjct: 243 tggaacgagaagttcttcttcaacat 268
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>emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, BAC clone T20K12
          Length = 109155

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 368   tggaacgagcagttcttcttcaacat 393
             ||||||||| ||||||||||||||||
Sbjct: 75947 tggaacgagaagttcttcttcaacat 75972
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>gb|BT005687.1| Arabidopsis thaliana clone U50017 putative anthranilate
           phosphoribosyltransferase (At3g61300) mRNA, complete cds
          Length = 2950

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 368 tggaacgagcagttcttcttcaacat 393
           ||||||||| ||||||||||||||||
Sbjct: 151 tggaacgagaagttcttcttcaacat 176
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>gb|BT003856.1| Arabidopsis thaliana clone RAFL16-03-I12 (R50017) putative
           anthranilate phosphoribosyltransferase (At3g61300) mRNA,
           complete cds
          Length = 3066

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 368 tggaacgagcagttcttcttcaacat 393
           ||||||||| ||||||||||||||||
Sbjct: 243 tggaacgagaagttcttcttcaacat 268
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 325     gaagttccgcacggccatcaa 345
               |||||||||||||||||||||
Sbjct: 4043428 gaagttccgcacggccatcaa 4043448
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>ref|XM_474407.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3036

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 314 tttgatggccagaagttccgcacggccatcaa 345
           ||||||||||||  |||||||||||| |||||
Sbjct: 97  tttgatggccagcggttccgcacggctatcaa 128
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>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence
          Length = 170975

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    gggcactgccaatgcctttg 302
              ||||||||||||||||||||
Sbjct: 167076 gggcactgccaatgcctttg 167057
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>emb|BX677666.17| Zebrafish DNA sequence from clone DKEY-58B18 in linkage group 2,
             complete sequence
          Length = 198342

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   aatttgatggccagaagttc 331
             ||||||||||||||||||||
Sbjct: 40292 aatttgatggccagaagttc 40273
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>emb|BX649335.8| Zebrafish DNA sequence from clone DKEY-24C2 in linkage group 2, complete
              sequence
          Length = 220851

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    aatttgatggccagaagttc 331
              ||||||||||||||||||||
Sbjct: 180343 aatttgatggccagaagttc 180324
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>gb|AF282469.1| Eyach virus segment 3, complete sequence
          Length = 3585

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 448  aaaccgcgtcagcaacaaac 467
            ||||||||||||||||||||
Sbjct: 2738 aaaccgcgtcagcaacaaac 2719
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>ref|XM_684474.1| PREDICTED: Danio rerio similar to chromodomain protein, Y
           chromosome-like isoform a (LOC561074), mRNA
          Length = 3303

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 aatttgatggccagaagttc 331
           ||||||||||||||||||||
Sbjct: 227 aatttgatggccagaagttc 208
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>gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone
             BACR30J04, complete sequence
          Length = 177277

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   gggcactgccaatgcctttg 302
             ||||||||||||||||||||
Sbjct: 79010 gggcactgccaatgcctttg 78991
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 314      tttgatggccagaagttccgcacggccatcaa 345
                ||||||||||||  |||||||||||| |||||
Sbjct: 34951937 tttgatggccagcggttccgcacggctatcaa 34951968
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>gb|AC009241.4| Homo sapiens BAC clone RP11-542O24 from 2, complete sequence
          Length = 171923

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    agagcttgaatttgatggcc 323
              ||||||||||||||||||||
Sbjct: 149629 agagcttgaatttgatggcc 149648
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>dbj|AK102910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113J04, full
           insert sequence
          Length = 3717

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 314 tttgatggccagaagttccgcacggccatcaa 345
           ||||||||||||  |||||||||||| |||||
Sbjct: 527 tttgatggccagcggttccgcacggctatcaa 558
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>dbj|AK073897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075A06, full
           insert sequence
          Length = 3730

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 314 tttgatggccagaagttccgcacggccatcaa 345
           ||||||||||||  |||||||||||| |||||
Sbjct: 549 tttgatggccagcggttccgcacggctatcaa 580
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>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete
             sequence
          Length = 84361

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 314   tttgatggccagaagttccgcacggccatcaa 345
             ||||||||||||  |||||||||||| |||||
Sbjct: 57319 tttgatggccagcggttccgcacggctatcaa 57350
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>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete
             sequence
          Length = 302538

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   gggcactgccaatgcctttg 302
             ||||||||||||||||||||
Sbjct: 44307 gggcactgccaatgcctttg 44288
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>emb|AL358334.3|CNS05TE5 Human chromosome 14 DNA sequence BAC R-218E20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174793

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   gcttgaatttgatggccaga 326
             ||||||||||||||||||||
Sbjct: 32617 gcttgaatttgatggccaga 32636
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>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
             complete sequence
          Length = 145391

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 314   tttgatggccagaagttccgcacggccatcaa 345
             ||||||||||||  |||||||||||| |||||
Sbjct: 10989 tttgatggccagcggttccgcacggctatcaa 11020


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,908,986
Number of Sequences: 3902068
Number of extensions: 2908986
Number of successful extensions: 50444
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50342
Number of HSP's gapped (non-prelim): 94
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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