Clone Name | bastl19e06 |
---|---|
Clone Library Name | barley_pub |
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 ccccattcccgtcccctccaac 47 |||||||||||||||||||||| Sbjct: 315955 ccccattcccgtcccctccaac 315976
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 gtcggcgacggcacggccggct 101 |||||||||||||||||||||| Sbjct: 96950 gtcggcgacggcacggccggct 96971
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 gcaacgtcgccgccggctcgg 208 ||||||||||||||||||||| Sbjct: 2460471 gcaacgtcgccgccggctcgg 2460451 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 gcaacgtcgccgccggctcgg 416 ||||||||||||||||||||| Sbjct: 2460471 gcaacgtcgccgccggctcgg 2460451 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 gcaacgtcgccgccggctcgg 312 ||||||||||||||||||||| Sbjct: 2460471 gcaacgtcgccgccggctcgg 2460451
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 gcaacgtcgccgccggctcgg 208 ||||||||||||||||||||| Sbjct: 3724138 gcaacgtcgccgccggctcgg 3724158 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 gcaacgtcgccgccggctcgg 312 ||||||||||||||||||||| Sbjct: 3724138 gcaacgtcgccgccggctcgg 3724158 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 gcaacgtcgccgccggctcgg 416 ||||||||||||||||||||| Sbjct: 3724138 gcaacgtcgccgccggctcgg 3724158
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 gcaacgtcgccgccggctcgg 208 ||||||||||||||||||||| Sbjct: 3464443 gcaacgtcgccgccggctcgg 3464463 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 gcaacgtcgccgccggctcgg 416 ||||||||||||||||||||| Sbjct: 3464443 gcaacgtcgccgccggctcgg 3464463 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 gcaacgtcgccgccggctcgg 312 ||||||||||||||||||||| Sbjct: 3464443 gcaacgtcgccgccggctcgg 3464463
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 gcaacgtcgccgccggctcgg 416 ||||||||||||||||||||| Sbjct: 1398459 gcaacgtcgccgccggctcgg 1398439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 gcaacgtcgccgccggctcgg 312 ||||||||||||||||||||| Sbjct: 1398459 gcaacgtcgccgccggctcgg 1398439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 gcaacgtcgccgccggctcgg 208 ||||||||||||||||||||| Sbjct: 1398459 gcaacgtcgccgccggctcgg 1398439
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 caaagcagagcagagatgaa 70 |||||||||||||||||||| Sbjct: 1973712 caaagcagagcagagatgaa 1973693
>ref|XM_365094.1| Magnaporthe grisea 70-15 hypothetical protein (MG09939.4) partial mRNA Length = 975 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gccggctcggtgcatcgacg 426 |||||||||||||||||||| Sbjct: 143 gccggctcggtgcatcgacg 124 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gccggctcggtgcatcgacg 322 |||||||||||||||||||| Sbjct: 143 gccggctcggtgcatcgacg 124 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gccggctcggtgcatcgacg 114 |||||||||||||||||||| Sbjct: 143 gccggctcggtgcatcgacg 124 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 gccggctcggtgcatcgacg 218 |||||||||||||||||||| Sbjct: 143 gccggctcggtgcatcgacg 124
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tcggcaacgtcgccgccggc 308 |||||||||||||||||||| Sbjct: 509844 tcggcaacgtcgccgccggc 509863 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcggcaacgtcgccgccggc 412 |||||||||||||||||||| Sbjct: 509844 tcggcaacgtcgccgccggc 509863 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 tcggcaacgtcgccgccggc 204 |||||||||||||||||||| Sbjct: 509844 tcggcaacgtcgccgccggc 509863
>gb|AF528521.1| Manduca sexta Eag K+ channel mRNA, complete cds Length = 4483 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cttcggcaacgtcgccgccg 410 |||||||||||||||||||| Sbjct: 1583 cttcggcaacgtcgccgccg 1602 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttcggcaacgtcgccgccg 202 |||||||||||||||||||| Sbjct: 1583 cttcggcaacgtcgccgccg 1602 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cttcggcaacgtcgccgccg 306 |||||||||||||||||||| Sbjct: 1583 cttcggcaacgtcgccgccg 1602
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gcaacgtcgccgccggctcg 415 |||||||||||||||||||| Sbjct: 839242 gcaacgtcgccgccggctcg 839223 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gcaacgtcgccgccggctcg 207 |||||||||||||||||||| Sbjct: 839242 gcaacgtcgccgccggctcg 839223 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gcaacgtcgccgccggctcg 311 |||||||||||||||||||| Sbjct: 839242 gcaacgtcgccgccggctcg 839223
>gb|AE004988.1| Halobacterium sp. NRC-1 section 19 of 170 of the complete genome Length = 12549 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 ggccggcggtcggcgacggcacgg 95 ||||| |||||||||||||||||| Sbjct: 6184 ggccgtcggtcggcgacggcacgg 6207
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cttcggcaacgtcgccgccg 410 |||||||||||||||||||| Sbjct: 1576797 cttcggcaacgtcgccgccg 1576816 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttcggcaacgtcgccgccg 202 |||||||||||||||||||| Sbjct: 1576797 cttcggcaacgtcgccgccg 1576816 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cttcggcaacgtcgccgccg 306 |||||||||||||||||||| Sbjct: 1576797 cttcggcaacgtcgccgccg 1576816
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcggcaacgtcgccgccggc 412 |||||||||||||||||||| Sbjct: 746349 tcggcaacgtcgccgccggc 746330 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tcggcaacgtcgccgccggc 204 |||||||||||||||||||| Sbjct: 746349 tcggcaacgtcgccgccggc 746330 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 tcggcaacgtcgccgccggc 308 |||||||||||||||||||| Sbjct: 746349 tcggcaacgtcgccgccggc 746330 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,361,766 Number of Sequences: 3902068 Number of extensions: 2361766 Number of successful extensions: 50269 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49208 Number of HSP's gapped (non-prelim): 1061 length of query: 466 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 444 effective length of database: 17,147,199,772 effective search space: 7613356698768 effective search space used: 7613356698768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)