>MSH5_CAEEL (Q19272) MutS protein homolog 5|
          Length = 1369

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +1

Query: 283  PQDSSHNVHLFKSSDLAPVSSIFASPHVNPPKESKILIRDDSVQLSQDSNSPN 441
            P++ S N  L +S+   P  +I +S  VNP   +     DDS+  SQD+  PN
Sbjct: 1110 PKNRSMNQSLIQSARDTPHETIRSSNEVNPEFFNIFNFPDDSILKSQDTYDPN 1162

>KAD_OCEIH (Q8ETW3) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 215

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 367 NPPKESKILIRDDSVQLSQDSNSPNSVRTRL 459
           NPPKE  I  +D S  + +D + P +V+ RL
Sbjct: 142 NPPKEEGICDKDGSQLIQRDDDQPETVKNRL 172

>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
            chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 247  FINNLSPIPPPKPQDSSHNVHLFKSSDLAPVSSIFASPHVNPPKES 384
            F  +L P PP  P++    VHL +  ++ PV      P + PP++S
Sbjct: 1161 FSTSLRPEPPKHPENIKAPVHLPQRPEMKPVD--IGRPVIRPPEQS 1204

>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43)
          Length = 4903

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
 Frame = +1

Query: 136  SHGGSPQPXXXXXXAMDTPDRPRAGAAAGFEDS--PVFNFINNLSPIPPPKPQDSSHNVH 309
            SH   P P       + TP  P  G +    +S  PV N +  LS +P P   + +    
Sbjct: 1883 SHSRPPSPVDPYAKMVGTPRPPPGGHSFPRRNSVTPVENCVP-LSSVPRPIHMNETSATR 1941

Query: 310  LFKSSDLAPVSSIFASPHVNPPKESKILIRDDSVQLSQDSNSPNS 444
               + DL   S   + P+  PP   + ++ D   Q S+  + P S
Sbjct: 1942 PSPARDLCASSMTNSDPYAKPPDTPRPMMTD---QFSKPFSLPRS 1983

>TEAD2_MOUSE (P48301) Transcriptional enhancer factor TEF-4 (TEA domain family|
           member 2) (TEAD-2) (Embryonic TEA domain-containing
           factor) (ETF) (ETEF-1)
          Length = 445

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 24/82 (29%), Positives = 32/82 (39%)
 Frame = +1

Query: 199 PRAGAAAGFEDSPVFNFINNLSPIPPPKPQDSSHNVHLFKSSDLAPVSSIFASPHVNPPK 378
           P A    G+E  P       LSP+PPP P   +      ++   A +  I  S  V PP 
Sbjct: 191 PPASDLPGYEPPPA------LSPLPPPAPSPPAWQA---RALGTARLQLIEFSAFVEPPD 241

Query: 379 ESKILIRDDSVQLSQDSNSPNS 444
                 R   V +SQ   SP +
Sbjct: 242 AVDSFQRHLFVHISQQCPSPGA 263

>AXUD1_MOUSE (P59054) Axin-1 up-regulated gene 1 protein (TGF-beta-induced|
           apoptosis protein 3) (TAIP-3)
          Length = 583

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = +1

Query: 226 EDSPVFNFINNLSPIPPPKPQDSSHNVHLFKSSDLAPVSSIFASPHVNPP 375
           ED+PV      LSP PP KP  SS       SSD+   S+  +S    PP
Sbjct: 317 EDTPVEQAA--LSPFPPSKPPVSSELGDSSCSSDMTDSSTTLSSGSSEPP 364

>WRK27_ARATH (Q9FLX8) Probable WRKY transcription factor 27 (WRKY DNA-binding|
           protein 27)
          Length = 348

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
 Frame = +1

Query: 211 AAAGFEDSPVFNFINNLSPIPPPKPQDSSHNVHLFKS-SDLAPVSSIFAS-----PHVNP 372
           + AG ED  + N      P PPP  Q SS    L  S     PV++   +     P + P
Sbjct: 24  SCAGHEDD-IGNCKQQQDPPPPPLFQASSSCNELQDSCKPFLPVTTTTTTTWSPPPLLPP 82

Query: 373 PKESK----ILIRDDSVQL-SQDSNSPNSVR 450
           PK S     IL++ + V L SQD   P SVR
Sbjct: 83  PKASSPSPNILLKQEQVLLESQDQKPPLSVR 113

>MAO2_RHIME (O30808) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)|
          Length = 761

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 310 LFKSSDLAPVSSIFASPHVNPPKESKILIRDDSVQLSQDSNSPNSVRTRLG 462
           + +S    P+    A+P      E   LIRDD++  +  S+ PN V   LG
Sbjct: 282 MVRSMGARPIIFAMANPDPEITPEEVALIRDDAIVATGRSDYPNQVNNVLG 332

>FA20A_HUMAN (Q96MK3) Protein FAM20A precursor|
          Length = 541

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 22/75 (29%), Positives = 35/75 (46%)
 Frame = +1

Query: 205 AGAAAGFEDSPVFNFINNLSPIPPPKPQDSSHNVHLFKSSDLAPVSSIFASPHVNPPKES 384
           + AAA    + V NF       P  +P   SH      S   + + ++FA P  N P+E 
Sbjct: 57  SAAAASDPGTIVHNFSRTE---PRTEPAGGSH------SGSSSKLQALFAHPLYNVPEEP 107

Query: 385 KILIRDDSVQLSQDS 429
            +L  +DS+  SQ++
Sbjct: 108 PLLGAEDSLLASQEA 122

>CREA_ASPOR (Q9P889) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 429

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +1

Query: 205 AGAAAGFEDSPVFNFINNLSPIPPP-KPQDSSHNVHLFKSSDLAPVSSIFASPHVNPP 375
           A AAA  +++ + N  N  S +PPP KP   S           APVS +  SP V+PP
Sbjct: 145 AAAAAAGQENAMVNVTNAGSLMPPPTKPMTRS-----------APVSQV-GSPDVSPP 190

>OAS2_HUMAN (P29728) 2'-5'-oligoadenylate synthetase 2 (EC 2.7.7.-)|
           ((2-5')oligo(A) synthetase 2) (2-5A synthetase 2) (p69
           OAS / p71 OAS) (p69OAS / p71OAS)
          Length = 726

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 214 AAGFEDSPVFNFINNLSPIPPPKPQDSSHNVHLFKSSDL 330
           +  F+  P FN +  LS    P P+  +  + L+KSSDL
Sbjct: 476 SVSFDVLPAFNALGQLSSGSTPSPEVYAGLIDLYKSSDL 514

>Y779_METJA (Q58189) Hypothetical protein MJ0779|
          Length = 299

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +1

Query: 199 PRAGAAAGFEDSPVFNFINNLSPIPPPKPQDSSHNVHLFKSSDLAPVSSIFASP 360
           P   A  G     V   ++ ++PIPP KP+D S    + +    A + ++FA P
Sbjct: 211 PAVAALLGAYLIAVSGMLSGVAPIPPVKPEDISKGFEIVQMG-TAIIGALFAIP 263

>FOXF2_HUMAN (Q12947) Forkhead box protein F2 (Forkhead-related protein FKHL6)|
           (Forkhead-related transcription factor 2) (FREAC-2)
           (Forkhead-related activator 2)
          Length = 444

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 21/76 (27%), Positives = 30/76 (39%)
 Frame = +1

Query: 148 SPQPXXXXXXAMDTPDRPRAGAAAGFEDSPVFNFINNLSPIPPPKPQDSSHNVHLFKSSD 327
           SP P      +   P  P    AAG      +   ++ SP+P      S+   H   +S 
Sbjct: 277 SPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSP 336

Query: 328 LAPVSSIFASPHVNPP 375
            A  SS  ASP++  P
Sbjct: 337 AAHWSSPGASPYLKQP 352

>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)|
          Length = 2414

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
 Frame = +1

Query: 244  NFINNLSPIPPPKPQDSSHNVHLFKSSDLAP------VSSIFASPH-------VNPPKES 384
            N + +  P+P P+PQ  S   H   S  + P      VS   +SPH        NP ++ 
Sbjct: 2305 NQVRSPQPVPSPRPQ--SQPPHSSPSPRMQPQPSPHHVSPQTSSPHPGLVAAQANPMEQG 2362

Query: 385  KILIRDDSVQLSQDSNSPNSVRTRLGSAIRL 477
                 D +  LSQ +++P        SA  L
Sbjct: 2363 HFASPDQNSMLSQLASNPGMANLHGASATDL 2393


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,105,481
Number of Sequences: 219361
Number of extensions: 651058
Number of successful extensions: 2154
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2152
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)