ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl19e01 |
|---|---|
| Clone Library Name | barley_pub |
>MAGE1_MACFA (Q9BE18) Melanoma-associated antigen E1 (MAGE-E1 antigen)| Length = 957 Score = 28.9 bits (63), Expect(2) = 0.076 Identities = 23/84 (27%), Positives = 35/84 (41%) Frame = -3 Query: 390 PGEKKPSSKLPVLETRVSLPEMPSPGRMVSVVADAAKRAPSMSRRKRNTSGARLAGERPG 211 PGE + ++ LP S+ +P+PG+ ++ P + +TS AGE P Sbjct: 252 PGEGRSTTMLPAASDGQSISLVPTPGK------GSSTSGPPTATEGLSTSVQPTAGEGPS 305 Query: 210 LSERAAQPPLVCITFRGTKWELPP 139 S PP C G +PP Sbjct: 306 TS----VPPTPC---GGLSTSVPP 322 Score = 25.0 bits (53), Expect(2) = 0.076 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = -1 Query: 152 GNFPQSSSPTSGDGERPSPPPLARRGL 72 G S PT G+G S PP A GL Sbjct: 314 GGLSTSVPPTPGEGLSTSVPPTATEGL 340
>SLSG1_BRAOA (P22552) S-locus-specific glycoprotein BS29-1 precursor| Length = 444 Score = 34.3 bits (77), Expect = 0.13 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 8/53 (15%) Frame = +2 Query: 296 TTDTILPGEG--ISGNETLVSKTGSFELGFF------SPGPGIHYFLGVRLRT 430 +T+T+ P E IS N+TLVS FELGFF SP ++LG+ +T Sbjct: 28 STNTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKT 80
>SLSG0_BRAOA (P22551) S-locus-specific glycoprotein precursor| Length = 444 Score = 34.3 bits (77), Expect = 0.13 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 8/53 (15%) Frame = +2 Query: 296 TTDTILPGEG--ISGNETLVSKTGSFELGFF------SPGPGIHYFLGVRLRT 430 +T+T+ P E IS N+TLVS FELGFF SP ++LG+ +T Sbjct: 28 STNTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKT 80
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 33.9 bits (76), Expect = 0.18 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = +1 Query: 73 SPRRANGGGDGRSPSPLVGLED--WGKFPLRSSEGYAHQWRLRSAFAQPRPLPSQTGAAG 246 SPRRA G + R+PSP +D W FPLR ++ + + + R +Q A Sbjct: 555 SPRRATQGSNSRNPSPHRTNKDIPWASFPLRPTQSDSPR-----TSSPSRTKQNQVPWAS 609 Query: 247 ISLPPAH*RRP 279 ISL P +P Sbjct: 610 ISLRPTQGDKP 620
>SLSG6_BRAOL (P07761) S-locus-specific glycoprotein S6 precursor (SLSG-6)| Length = 436 Score = 33.5 bits (75), Expect = 0.23 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +2 Query: 326 ISGNETLVSKTGSFELGFFSPGPGIHYFLGV 418 IS N TLVS +FELGFF ++LG+ Sbjct: 43 ISSNRTLVSPGNNFELGFFRTNSSSRWYLGI 73
>UT14A_MOUSE (Q640M1) U3 small nucleolar RNA-associated protein 14 homolog A| (Juvenile spermatogonial depletion-like X-linked protein) (Jsd-like X-linked protein) Length = 767 Score = 32.7 bits (73), Expect = 0.39 Identities = 28/119 (23%), Positives = 47/119 (39%) Frame = -2 Query: 373 QLEAAGLRDQGLVTGDALAGEDGVRGGRRGQEGAVNEQEEEKYQRRPFGWGEAGAERTRC 194 +LE G RDQ + +A AG+D ++ + + A+ + + GWGE G + Sbjct: 579 ELEDEGARDQKQMIKEAFAGDDVIKEFLKEKREAIQANKPKAVDLTLPGWGEWGGMNLKP 638 Query: 193 AAATGVHNLQRNEVGTSPNPPARPVATVNARRRRHWRAAGSSCSQALLQFSKLQKFRAT 17 +A L + G P ++ +R H AA F+ Q+F T Sbjct: 639 SARKRRRFLIKAPEGPPRKDKNLPNVIISEKRNIH--AAAHQVRVLPYPFTHHQQFERT 695
>CIZ1_HUMAN (Q9ULV3) Cip1-interacting zinc finger protein (Nuclear protein| NP94) Length = 898 Score = 30.4 bits (67), Expect(2) = 0.44 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Frame = -2 Query: 232 FGWGEAGAERTRCAAATGVHNLQRNEVGTSPNPPARPVA---TVNAR 101 F +GA+ + C + NLQ+ + +P+P RPV+ +NAR Sbjct: 807 FYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPTTRPVSRRCAINAR 853 Score = 20.8 bits (42), Expect(2) = 0.44 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = -1 Query: 107 RPSPPPLARR 78 RPS PPL RR Sbjct: 883 RPSQPPLPRR 892
>SLSG4_BRAOL (P17841) S-locus-specific glycoprotein S14 precursor (SLSG-14)| (Fragment) Length = 434 Score = 32.3 bits (72), Expect = 0.51 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +2 Query: 326 ISGNETLVSKTGSFELGFFSPGPGIHYFLGV 418 IS N TLVS FELGFF ++LG+ Sbjct: 40 ISSNRTLVSPGNVFELGFFRTNSSSRWYLGI 70
>SLSG3_BRAOL (P17840) S-locus-specific glycoprotein S13 precursor (SLSG-13)| (Fragment) Length = 434 Score = 32.0 bits (71), Expect = 0.67 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +2 Query: 326 ISGNETLVSKTGSFELGFFSPGPGIHYFLGV 418 IS N TLVS FELGFF ++LG+ Sbjct: 42 ISSNRTLVSPGNVFELGFFKTTSSSRWYLGI 72
>EXPA_DROME (Q07436) Protein expanded| Length = 1427 Score = 32.0 bits (71), Expect = 0.67 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Frame = -3 Query: 426 LSRTPKK*WMPGPGEKKPSSKLPVLETRVSLPEMPSPGRMVSVVADAAKRAPSMSRRKRN 247 ++R KK MP P EK P +P P P RM + ++ P+++ N Sbjct: 1207 VNRRLKKPPMPAPSEKPPP-----------IPSKPIPSRMSPI---PPRKPPTLNPHHAN 1252 Query: 246 T------SGARLAGERP 214 + SGA+ AGERP Sbjct: 1253 SPLTKTSSGAQWAGERP 1269
>YLB8_CAEEL (P46582) Hypothetical protein C34E10.8| Length = 1024 Score = 31.2 bits (69), Expect = 1.1 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 14/92 (15%) Frame = -3 Query: 333 PEMPSPGRMVSVVADAAKRAPSMSRRK------------RNTSGARLAGERPGLSERAAQ 190 P+ P PG A R P R R +++AG+RPG++ A Q Sbjct: 601 PKSPQPGTSSQTFRSQASRLPIAPHRAIAAGLNPADVGTRPAYRSQMAGQRPGMTPSAQQ 660 Query: 189 --PPLVCITFRGTKWELPPILQPDQWRR*TPV 100 P L+ +G+ + P RR TPV Sbjct: 661 GSPQLISPPRQGSMMPVAMNQSPQAVRRQTPV 692
>NFL_XENLA (P35616) Neurofilament triplet L protein (Neurofilament light| polypeptide) (NF-L) Length = 543 Score = 30.8 bits (68), Expect = 1.5 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = -2 Query: 418 DTQEVVDAGAWGKEAQLEAAGLRDQGLVTGDALAGEDGVRGGRRGQEGAVNEQEE----E 251 D +E +++ +EA+ EA ++ + GE+ G G+E E EE E Sbjct: 444 DIEETIESSR-AEEAKAEAPEEEEEEAAEEEGEGGEEAEEEGEEGEEAKEEEAEEEGGQE 502 Query: 250 KYQRRPFGWGEAGAE 206 K + G GEA AE Sbjct: 503 KEEEGEEGEGEAEAE 517
>RPF1_MOUSE (Q7TND5) Ribosome production factor 1 (Ribosome biogenesis protein| RPF1) (Brix domain-containing protein 5) Length = 349 Score = 30.8 bits (68), Expect = 1.5 Identities = 20/79 (25%), Positives = 33/79 (41%) Frame = -2 Query: 325 ALAGEDGVRGGRRGQEGAVNEQEEEKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEVGT 146 A AGE V GG+RG + +E ++ G E+G + + AA Sbjct: 2 AKAGEKSVGGGKRGLKRKAAAEEPQEAAAASDGTAESGVQPAKAAAF------------- 48 Query: 145 SPNPPARPVATVNARRRRH 89 PP ++ + ++RRH Sbjct: 49 ---PPGFSISEIKNKQRRH 64
>CS016_HUMAN (Q8ND99) Protein C19orf16| Length = 567 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = -3 Query: 426 LSRTPKK*WMPGPG----EKKPSSKLPVLETRVSLPEMPSPGRMVSVVADAAKRAPSMSR 259 L P W P PG +K P++ P + P +P+P + V +++AP++ Sbjct: 75 LPAVPASSWKPPPGLAPPQKAPAASAPPRKA----PAVPAPSQKAPAVPAPSQKAPAIPA 130 Query: 258 RKRNTSGA 235 R S A Sbjct: 131 PSRKASAA 138
>MIA40_KLULA (Q6CSA1) Intermembrane space import and assembly protein 40,| mitochondrial precursor (Mitochondrial import inner membrane translocase TIM40) Length = 406 Score = 30.0 bits (66), Expect = 2.5 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -2 Query: 328 DALAGE-DGVRGGRRGQEGAVNEQEEEKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEV 152 D GE D V + E + EE+ + R G A T AAA GV ++NE Sbjct: 208 DGSEGESDVVLHEKSPAEAETITEAEEQAEIRSISGGTAEQSATAAAAAAGVQGEKKNEQ 267 Query: 151 GTSPNP 134 T+ NP Sbjct: 268 QTAYNP 273
>LEGB_PEA (P14594) Legumin B [Contains: Legumin B alpha chain (Legumin B| acidic chain); Legumin B beta chain (Legumin B basic chain)] (Fragment) Length = 338 Score = 30.0 bits (66), Expect = 2.5 Identities = 21/64 (32%), Positives = 31/64 (48%) Frame = -2 Query: 295 GRRGQEGAVNEQEEEKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEVGTSPNPPARPVA 116 G +E E+EEE+ QR+ + G E T C+A N+ R G N A ++ Sbjct: 135 GEEEEELEKEEEEEEEIQRQHSKGRKNGLEETICSAKIR-ENIARPSRGDLYNSGAGRIS 193 Query: 115 TVNA 104 TVN+ Sbjct: 194 TVNS 197
>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle| myosin heavy chain IIc) (NMHC II-C) Length = 1995 Score = 30.0 bits (66), Expect = 2.5 Identities = 26/79 (32%), Positives = 37/79 (46%) Frame = -2 Query: 424 EPDTQEVVDAGAWGKEAQLEAAGLRDQGLVTGDALAGEDGVRGGRRGQEGAVNEQEEEKY 245 + +T+ + G+ + + EAAGLR+Q + +A A E R GR Q E + Sbjct: 1342 QEETRAKLALGSRVRAMEAEAAGLREQ--LEEEAAARE---RAGRELQTAQAQLSEWRRR 1396 Query: 244 QRRPFGWGEAGAERTRCAA 188 Q G EAG E R AA Sbjct: 1397 QEEEAGALEAGEEARRRAA 1415
>CSP_PLAVS (P13826) Circumsporozoite protein (CS) (Fragment)| Length = 343 Score = 29.6 bits (65), Expect = 3.3 Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 7/92 (7%) Frame = -2 Query: 385 GKEAQLEAAGLRDQGLVTGDALAGEDGVRGGRRGQEG-------AVNEQEEEKYQRRPFG 227 G A + AG R G GD AG+ GG G +G A NE+ ++Y + Sbjct: 215 GDRAAGQPAGDRAAGQAAGDRAAGQ--AAGGNAGGQGQNNEGANAPNEKSVKEYLDKV-- 270 Query: 226 WGEAGAERTRCAAATGVHNLQRNEVGTSPNPP 131 G E T C+ GV R V + P Sbjct: 271 RATVGTEWTPCSVTCGVGVRVRRRVNAANKKP 302
>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 29.6 bits (65), Expect = 3.3 Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Frame = -2 Query: 325 ALAGEDGVRGGRRGQEGAVNEQEE--EKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEV 152 A AG G RG G+ EE +K R F +A T A G + + Sbjct: 37 AAAGAPGARGSEPRDPGSPRGSEEPGKKRHERLFHRQDALWISTSSAGTGGA---EPPAL 93 Query: 151 GTSPNPPARPVATVNARRRRHWRA 80 +P PARPV+ RR W A Sbjct: 94 SPAPASPARPVSPAPGRRLSLWAA 117
>KLD7B_HUMAN (Q96G42) Kelch domain-containing protein 7B| Length = 495 Score = 29.6 bits (65), Expect = 3.3 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%) Frame = -2 Query: 382 KEAQLEAAGLRDQGL---VTGDALAGEDGVRGGRRGQEGAVNEQEEEK-----YQRRPFG 227 K ++ E A +Q + +GD G G G+ GA+ E++EE + +RP G Sbjct: 33 KRSRCEIAPSSEQEVRPAASGDPQGEAPGEGGSPAGRSGALTEKQEEARKLMVFLQRPGG 92 Query: 226 WG 221 WG Sbjct: 93 WG 94
>DCDC2_MOUSE (Q5DU00) Doublecortin domain-containing protein 2| Length = 475 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -1 Query: 155 SGNFPQSSSPTSGDGERPSPPPLARRGLVLLSSFTPVQQASEIQS 21 SGN+ QS S T G + SP PL R+G +S P + ++S Sbjct: 253 SGNYRQSKS-TIGSSDNSSPQPLKRKGKKDSNSEKPTKVKQSVKS 296
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 29.3 bits (64), Expect = 4.3 Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Frame = -2 Query: 325 ALAGEDGVRGGRRGQEGAVNEQEE--EKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEV 152 A G G RG G+ EE +K R F +A T A A G + + Sbjct: 37 AAVGAPGARGSEPRDPGSPRGAEEPGKKRHERLFHRQDALWISTSSAGAGGA---EPPAL 93 Query: 151 GTSPNPPARPVATVNARRRRHWRA 80 +P PARPV+ RR W A Sbjct: 94 SPAPASPARPVSPAPGRRLSLWAA 117
>GATM_MACFA (Q4R806) Glycine amidinotransferase, mitochondrial precursor (EC| 2.1.4.1) (L-arginine:glycine amidinotransferase) (Transamidinase) (AT) Length = 423 Score = 29.3 bits (64), Expect = 4.3 Identities = 18/66 (27%), Positives = 30/66 (45%) Frame = -2 Query: 304 VRGGRRGQEGAVNEQEEEKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEVGTSPNPPAR 125 +RGG RG E + R GW + + T+ A A+ ++ ++ T P P Sbjct: 7 LRGGSRGAEAV--HYIGSRLGRTLTGWVQRTFQSTQAATASSRNSFAADDKATEPLPKDC 64 Query: 124 PVATVN 107 PV++ N Sbjct: 65 PVSSYN 70
>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 29.3 bits (64), Expect = 4.3 Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Frame = -2 Query: 325 ALAGEDGVRGGRRGQEGAVNEQEE--EKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEV 152 A G G RG G+ EE +K R F +A T A A G + + Sbjct: 37 AAVGAPGARGSEPRDPGSPRGAEEPGKKRHERLFHRQDALWISTSSAGAGGA---EPPAL 93 Query: 151 GTSPNPPARPVATVNARRRRHWRA 80 +P PARPV+ RR W A Sbjct: 94 SPAPASPARPVSPAPGRRLSLWAA 117
>IL4RA_RAT (Q63257) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) Length = 801 Score = 29.3 bits (64), Expect = 4.3 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +3 Query: 360 AASSWASFPQAPASTTSWVSGSE 428 A++SWA FP P+ TT V+G + Sbjct: 443 ASTSWACFPTGPSETTCQVTGQQ 465
>V120_HCMVA (P16784) Capsid assembly protein UL47| Length = 983 Score = 29.3 bits (64), Expect = 4.3 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Frame = -3 Query: 381 KKPSSKLPVLETRVSL---PEMPSPGRMVSVVADAAKRAPSMSRRKRNTSGARL 229 KK +SK+ VLETRV+L S G +V+ V A +SR GA+L Sbjct: 806 KKTASKIKVLETRVTLALEQAQRSNGAVVTAVQRALAVFDVLSRENLERRGAQL 859
>H2B_NEUCR (P37210) Histone H2B| Length = 137 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -3 Query: 396 PGPGEKKPSSKLPVLETRVSLPEMPSPGRMVSVVADAAKR 277 P P +KKP+SK P T PE G+ + D KR Sbjct: 3 PKPADKKPASKAPA--TASKAPEKKDAGKKTAASGDKKKR 40
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 26.6 bits (57), Expect(2) = 4.4 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 7/60 (11%) Frame = -3 Query: 396 PGPGEKKPSS--KLPVLETR-----VSLPEMPSPGRMVSVVADAAKRAPSMSRRKRNTSG 238 PGP P+S ++P L R S P +PSPGR + ++R P R SG Sbjct: 308 PGPPPLPPASNDEIPRLPQRNLSLTSSAPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSG 367 Score = 21.2 bits (43), Expect(2) = 4.4 Identities = 10/23 (43%), Positives = 10/23 (43%) Frame = -1 Query: 158 RSGNFPQSSSPTSGDGERPSPPP 90 RSG P G G P PPP Sbjct: 401 RSGPRPPLPPDRPGAGAPPPPPP 423
>SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (SgI)| (Chromogranin B) (CgB) [Contains: Peptide SR-17; Peptide HQ-34; Peptide KR-11] Length = 668 Score = 28.9 bits (63), Expect = 5.7 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = -2 Query: 418 DTQEVVDAGAWGKEAQLEAAGLRDQGLVTGDALAGEDGVRGGRRGQEGAVNEQEE-EKYQ 242 DTQ A G E AG G + D ++G EG E+EE EKYQ Sbjct: 111 DTQGPPGADVEGGGHSREGAGKPRGGPYSSDNPVAKEGKTRHSEKSEGQDREEEEGEKYQ 170 Query: 241 RRPFGWGEAGAE 206 +R GE G+E Sbjct: 171 KRE--RGEEGSE 180
>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 751 Score = 28.9 bits (63), Expect = 5.7 Identities = 21/89 (23%), Positives = 35/89 (39%) Frame = -3 Query: 393 GPGEKKPSSKLPVLETRVSLPEMPSPGRMVSVVADAAKRAPSMSRRKRNTSGARLAGERP 214 GP K + + +LE P PGR VS V R +S+ + + P Sbjct: 330 GPSVGKGTKEASLLEPTDKQPAAGLPGRPVSRVPQLKARVAGVSKDRTGNDEKKAKTSTP 389 Query: 213 GLSERAAQPPLVCITFRGTKWELPPILQP 127 ++ + P + T R T P+++P Sbjct: 390 SCAKTPSNRPCLSPT-RPTPGSSDPLIKP 417
>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)| Length = 5120 Score = 28.9 bits (63), Expect = 5.7 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 6/76 (7%) Frame = -3 Query: 393 GPGEKKPSSKLPVLETR--VSLPEMPSPGRMVSVVADAAKRAPSMSRRKRNTS----GAR 232 GP +++P S+ P + P P PG+ K+ P + + +S A+ Sbjct: 267 GPPKQQPGSEKPTAQQTGPAKQPPQPGPGKTPLQQTGPVKQVPPQAGPTKPSSQTAGAAK 326 Query: 231 LAGERPGLSERAAQPP 184 ++PGL++ Q P Sbjct: 327 SLAQQPGLTKPPGQQP 342
>CSP_PLACC (P08673) Circumsporozoite protein precursor (CS)| Length = 398 Score = 28.9 bits (63), Expect = 5.7 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = -2 Query: 397 AGAWGKEAQLEAAGLRDQGLVTGDALAGEDGVRG-GRRGQEGAVNE 263 AGA G A AG G +A AGE G G GR G A E Sbjct: 238 AGAAGNNAAAGEAGAGGAGRAGNNAAAGEAGAGGAGRAGNNAAAGE 283
>GATM_HUMAN (P50440) Glycine amidinotransferase, mitochondrial precursor (EC| 2.1.4.1) (L-arginine:glycine amidinotransferase) (Transamidinase) (AT) Length = 423 Score = 28.9 bits (63), Expect = 5.7 Identities = 18/66 (27%), Positives = 30/66 (45%) Frame = -2 Query: 304 VRGGRRGQEGAVNEQEEEKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEVGTSPNPPAR 125 +RGG RG E + R GW + + T+ A A+ ++ ++ T P P Sbjct: 7 LRGGSRGAEAV--HYIGSRLGRTLTGWVQRTFQSTQAATASSRNSCAADDKATEPLPKDC 64 Query: 124 PVATVN 107 PV++ N Sbjct: 65 PVSSYN 70
>UT14C_HUMAN (Q5TAP6) U3 small nucleolar RNA-associated protein 14 homolog C| Length = 766 Score = 28.9 bits (63), Expect = 5.7 Identities = 23/95 (24%), Positives = 38/95 (40%) Frame = -2 Query: 373 QLEAAGLRDQGLVTGDALAGEDGVRGGRRGQEGAVNEQEEEKYQRRPFGWGEAGAERTRC 194 +LE RDQ + +A AG+D +R + + AV + + GWGE G + Sbjct: 581 ELEDEEERDQRQMIKEAFAGDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGGVGLKP 640 Query: 193 AAATGVHNLQRNEVGTSPNPPARPVATVNARRRRH 89 +A L + G P ++ +R H Sbjct: 641 SAKKRRQFLIKAPEGPPRKDKNLPNVIISEKRNIH 675
>SENP2_HUMAN (Q9HC62) Sentrin-specific protease 2 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP2) (SMT3-specific isopeptidase 2) (Smt3ip2) (Axam2) Length = 589 Score = 28.9 bits (63), Expect = 5.7 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Frame = -2 Query: 322 LAGEDGVRGGRRGQ---EGAVNEQEEEKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEV 152 + E+ +G RR E V ++E EKY++ E+G + C + H+ QR+++ Sbjct: 188 MISEESGKGLRRPHCTVEEGVQKEEREKYRKLLERLKESGHGNSVCPVTSNYHSSQRSQM 247 Query: 151 GT 146 T Sbjct: 248 DT 249
>REV_HV1BN (P12485) REV protein (Anti-repression transactivator protein)| (ART/TRS) (Fragment) Length = 106 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/22 (63%), Positives = 14/22 (63%), Gaps = 2/22 (9%) Frame = -2 Query: 139 NPPARPVATVNAR--RRRHWRA 80 NPP RP T AR RRR WRA Sbjct: 16 NPPPRPEGTRQARRNRRRRWRA 37
>BRO1_NEUCR (Q7SAN9) Vacuolar protein-sorting protein bro-1 (BRO| domain-containing protein 1) Length = 1012 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -1 Query: 143 PQSSSPTSGDGERPSPPPLA 84 P S P+SG G RP+P PL+ Sbjct: 790 PTSPKPSSGSGGRPTPAPLS 809
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 28.5 bits (62), Expect = 7.4 Identities = 16/30 (53%), Positives = 18/30 (60%) Frame = -1 Query: 170 PSEERSGNFPQSSSPTSGDGERPSPPPLAR 81 PS R GN P SSS G G+RPSP + R Sbjct: 172 PSAPRPGNNPFSSS--QGMGQRPSPSNIPR 199
>GATM_PONPY (Q5RFB9) Glycine amidinotransferase, mitochondrial precursor (EC| 2.1.4.1) (L-arginine:glycine amidinotransferase) (Transamidinase) (AT) Length = 423 Score = 28.5 bits (62), Expect = 7.4 Identities = 18/66 (27%), Positives = 30/66 (45%) Frame = -2 Query: 304 VRGGRRGQEGAVNEQEEEKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEVGTSPNPPAR 125 +RGG RG E + R GW + + T+ A A+ ++ ++ T P P Sbjct: 7 LRGGSRGAEAV--HYIGSRLGRTLTGWVQRTFQSTQAATASSRNSSAADDKATEPLPKDC 64 Query: 124 PVATVN 107 PV++ N Sbjct: 65 PVSSYN 70
>DENR_BRARE (Q6DH65) Density-regulated protein (DRP)| Length = 208 Score = 28.5 bits (62), Expect = 7.4 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -2 Query: 316 GEDGVRGGRRGQEGAVNEQEEEKYQRR 236 GEDG G RG+ E+EE+K Q+R Sbjct: 82 GEDGGGGRGRGEAPPAGEEEEKKKQKR 108
>KPCD2_HUMAN (Q9BZL6) Serine/threonine-protein kinase D2 (EC 2.7.11.13)| (nPKC-D2) Length = 878 Score = 28.5 bits (62), Expect = 7.4 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 Query: 396 PGPGEKKPSSKLPVLETRVSLPEMPSPGRMVS 301 PGPG P L + LP++P+PG VS Sbjct: 15 PGPGSPPPPGGLELQSPPPLLPQIPAPGSGVS 46
>HISX_PYRFU (O59626) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 375 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +2 Query: 344 LVSKTGSFELGFFSPGPGIHYFLGV 418 L+ G+ LG ++P P YFLGV Sbjct: 289 LIENAGAIYLGLYTPVPAADYFLGV 313
>ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) Length = 407 Score = 28.1 bits (61), Expect = 9.7 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = -1 Query: 218 GRG*ANALRSRHWCA*PSEERSGN--FPQSSSPTSGDGERPSPPPLARRGLVLLSSFTPV 45 G +++ RS+ PS S P S+P + PSP P + G +S T Sbjct: 202 GSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQP 261 Query: 44 QQASEIQS 21 Q S++QS Sbjct: 262 IQLSDLQS 269
>DLG7_HUMAN (Q15398) Discs large homolog 7 (Hepatoma up-regulated protein)| (HURP) Length = 846 Score = 28.1 bits (61), Expect = 9.7 Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 7/61 (11%) Frame = -3 Query: 396 PGP---GEKKPSSKLPVLETRVSLPEMPSPGRMVSVVADAAKRAP----SMSRRKRNTSG 238 PGP EKK S K E +V P MP+ RM AAK+ P S + RK T Sbjct: 177 PGPRQTSEKKVSDK----EKKVVQPVMPTSLRMTRSATQAAKQVPRTVSSTTARKPVTRA 232 Query: 237 A 235 A Sbjct: 233 A 233
>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis| pigmentosa 1-like protein 1) Length = 1859 Score = 28.1 bits (61), Expect = 9.7 Identities = 18/65 (27%), Positives = 25/65 (38%) Frame = -2 Query: 259 EEEKYQRRPFGWGEAGAERTRCAAATGVHNLQRNEVGTSPNPPARPVATVNARRRRHWRA 80 + EKY++ GW +G R A G Q + P P P R+R+ R Sbjct: 602 QTEKYRQGTRGWEVSGEPELRLALVPGHSGSQDTQRDALPAPACAP---AQWRQRKQKRP 658 Query: 79 AGSSC 65 A C Sbjct: 659 ASVEC 663
>RNFF_RHOCA (Q52718) Nitrogen fixation protein rnfF| Length = 523 Score = 28.1 bits (61), Expect = 9.7 Identities = 29/86 (33%), Positives = 34/86 (39%), Gaps = 9/86 (10%) Frame = -2 Query: 427 SEPDTQEVVDAGAWGK-------EAQLEAAGLRDQGLVTGDA--LAGEDGVRGGRRGQEG 275 S P Q +D GA+ K EA L AAG+RD L G + G+ G R R Sbjct: 329 SNPAVQ--LDLGAYAKGAALDLAEADLTAAGIRDAVLNAGGGVQVLGDHGSRPWRVA--- 383 Query: 274 AVNEQEEEKYQRRPFGWGEAGAERTR 197 R PF WG GA R Sbjct: 384 ----------IRDPFEWGVVGAVSLR 399
>NSBP1_HUMAN (P82970) Nucleosome-binding protein 1| Length = 282 Score = 28.1 bits (61), Expect = 9.7 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Frame = -2 Query: 424 EPDTQEVVDAGAWGKEAQLEAAGLRDQ-GLVTG-------DALAGEDGVRGGRRGQEGAV 269 E +E +AG K+ + E G D+ G G D GEDG G G+E Sbjct: 135 EDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGE 194 Query: 268 NEQEEE 251 +E+EEE Sbjct: 195 DEKEEE 200 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,344,073 Number of Sequences: 219361 Number of extensions: 1333989 Number of successful extensions: 6847 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 6222 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6831 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
