ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl19d12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 644 bits (325), Expect = 0.0 Identities = 325/325 (100%) Strand = Plus / Minus Query: 1 atccaaatcaccaaactgacagcagcccagatccacccaccccacctcacctctctcgcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5864 atccaaatcaccaaactgacagcagcccagatccacccaccccacctcacctctctcgcc 5805 Query: 61 cccgccggtgggtttaggggcggccgccggagagggagggcggcggcgagacgagatgct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5804 cccgccggtgggtttaggggcggccgccggagagggagggcggcggcgagacgagatgct 5745 Query: 121 gaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgcggcgccc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5744 gaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgcggcgccc 5685 Query: 181 atggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatgggcac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5684 atggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatgggcac 5625 Query: 241 cctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttccacaagac 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5624 cctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttccacaagac 5565 Query: 301 acagccgctcttcgtttccggaggt 325 ||||||||||||||||||||||||| Sbjct: 5564 acagccgctcttcgtttccggaggt 5540 Score = 246 bits (124), Expect = 5e-62 Identities = 130/132 (98%) Strand = Plus / Minus Query: 322 aggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgct 381 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4636 aggtgacgattacaagatcaaagtgtggaactacaagacgcaccgctgcctcttcacgct 4577 Query: 382 ccatggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgt 441 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4576 ccatggccaccttgactacatccgcactgtccagttccacgacgagcacccgtggatcgt 4517 Query: 442 cagtgccagcga 453 |||||||||||| Sbjct: 4516 cagtgccagcga 4505
>ref|XM_469514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3657 Score = 420 bits (212), Expect = e-114 Identities = 308/340 (90%) Strand = Plus / Plus Query: 116 atgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgcgg 175 |||||||||||||||||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 1 atgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgcgg 60 Query: 176 cgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatg 235 || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61 cggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgcatg 120 Query: 236 ggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttccac 295 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 ggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccac 180 Query: 296 aagacacagccgctcttcgtttccggaggtgacgattacaagatcaaggtgtggaactac 355 || |||||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 181 gccacgcagccgctcttcgtctccggaggtgatgattacaagattaaggtatggaattac 240 Query: 356 aagacgcaccgctgcctcttcacgctccatggccaccttgactacatccgcaccgtccag 415 ||||| ||||| |||||||||||||| |||||||||||||||||||| ||||| || || Sbjct: 241 aagacacaccgttgcctcttcacgcttcatggccaccttgactacattcgcacggtgcaa 300 Query: 416 ttccacgacgagcacccgtggatcgtcagtgccagcgatg 455 |||||| ||||| |||||||||||| |||||||| |||| Sbjct: 301 ttccaccacgagtgcccgtggatcgtaagtgccagtgatg 340
>dbj|AK103786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I16, full insert sequence Length = 4284 Score = 416 bits (210), Expect = e-113 Identities = 303/334 (90%) Strand = Plus / Plus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 227 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 286 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 287 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 346 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 347 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 406 Query: 294 acaagacacagccgctcttcgtttccggaggtgacgattacaagatcaaggtgtggaact 353 || || |||||||||||||| ||||||||||| ||||||||||| ||||||||||| | Sbjct: 407 acgccacccagccgctcttcgtctccggaggtgatgattacaagattaaggtgtggaatt 466 Query: 354 acaagacgcaccgctgcctcttcacgctccatggccaccttgactacatccgcaccgtcc 413 ||||||| ||||||||||||||||| || ||||| |||||||||||||| |||||||| | Sbjct: 467 acaagacacaccgctgcctcttcacacttcatgggcaccttgactacattcgcaccgtgc 526 Query: 414 agttccacgacgagcacccgtggatcgtcagtgc 447 | |||||| ||||| |||| ||||| || ||||| Sbjct: 527 aattccaccacgagtacccatggatagtaagtgc 560
>dbj|AK100467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J01, full insert sequence Length = 2535 Score = 416 bits (210), Expect = e-113 Identities = 303/334 (90%) Strand = Plus / Minus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 1285 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 1226 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1225 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 1166 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1165 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 1106 Query: 294 acaagacacagccgctcttcgtttccggaggtgacgattacaagatcaaggtgtggaact 353 || || |||||||||||||| ||||||||||| ||||||||||| ||||||||||| | Sbjct: 1105 acgccacccagccgctcttcgtctccggaggtgatgattacaagattaaggtgtggaatt 1046 Query: 354 acaagacgcaccgctgcctcttcacgctccatggccaccttgactacatccgcaccgtcc 413 ||||||| ||||||||||||||||| || ||||| |||||||||||||| |||||||| | Sbjct: 1045 acaagacacaccgctgcctcttcacacttcatgggcaccttgactacattcgcaccgtgc 986 Query: 414 agttccacgacgagcacccgtggatcgtcagtgc 447 | |||||| ||||| |||| ||||| || ||||| Sbjct: 985 aattccaccacgagtacccatggatagtaagtgc 952
>dbj|AK100286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075G08, full insert sequence Length = 4221 Score = 392 bits (198), Expect = e-106 Identities = 300/334 (89%) Strand = Plus / Plus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 143 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 202 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 203 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 262 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 263 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 322 Query: 294 acaagacacagccgctcttcgtttccggaggtgacgattacaagatcaaggtgtggaact 353 || || |||||||||||||| ||||||||||| ||||||||||| ||||||||||| | Sbjct: 323 acgccacgcagccgctcttcgtctccggaggtgatgattacaagattaaggtgtggaatt 382 Query: 354 acaagacgcaccgctgcctcttcacgctccatggccaccttgactacatccgcaccgtcc 413 ||||||| ||||||||||||||||| || || || ||||||||||| || |||||||| | Sbjct: 383 acaagacacaccgctgcctcttcacacttcacgggcaccttgactatattcgcaccgtgc 442 Query: 414 agttccacgacgagcacccgtggatcgtcagtgc 447 | |||||| |||| |||| ||||| || ||||| Sbjct: 443 aattccaccacgaatacccatggatagtaagtgc 476
>ref|XM_469513.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3657 Score = 389 bits (196), Expect = e-105 Identities = 298/332 (89%) Strand = Plus / Plus Query: 116 atgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgcgg 175 |||||||||||||||||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 1 atgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgcgg 60 Query: 176 cgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatg 235 || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61 cggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgcatg 120 Query: 236 ggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttccac 295 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 ggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccac 180 Query: 296 aagacacagccgctcttcgtttccggaggtgacgattacaagatcaaggtgtggaactac 355 || |||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 181 gccacgcagccgctcttcgtctccggaggtgatgattacaagattaaggtgtggaattac 240 Query: 356 aagacgcaccgctgcctcttcacgctccatggccaccttgactacatccgcaccgtccag 415 ||||| ||||||||||||||||| || || || ||||||||||| || |||||||| || Sbjct: 241 aagacacaccgctgcctcttcacacttcacgggcaccttgactatattcgcaccgtgcaa 300 Query: 416 ttccacgacgagcacccgtggatcgtcagtgc 447 |||||| |||| |||| ||||| || ||||| Sbjct: 301 ttccaccacgaatacccatggatagtaagtgc 332
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 297 bits (150), Expect = 2e-77 Identities = 198/214 (92%) Strand = Plus / Minus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 28441262 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 28441203 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28441202 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 28441143 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28441142 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 28441083 Query: 294 acaagacacagccgctcttcgtttccggaggtga 327 || || |||||||||||||| ||||||||||| Sbjct: 28441082 acgccacgcagccgctcttcgtctccggaggtga 28441049 Score = 293 bits (148), Expect = 3e-76 Identities = 196/212 (92%) Strand = Plus / Minus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 28429642 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 28429583 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28429582 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 28429523 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28429522 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 28429463 Query: 294 acaagacacagccgctcttcgtttccggaggt 325 || || |||||||||||||| ||||||||| Sbjct: 28429462 acgccacgcagccgctcttcgtctccggaggt 28429431 Score = 139 bits (70), Expect = 9e-30 Identities = 118/134 (88%) Strand = Plus / Minus Query: 322 aggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgct 381 |||||| ||||||||||| ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 28440468 aggtgatgattacaagattaaggtatggaattacaagacacaccgttgcctcttcacgct 28440409 Query: 382 ccatggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgt 441 |||||||||||||||||||| ||||| || || |||||| ||||| |||||||||||| Sbjct: 28440408 tcatggccaccttgactacattcgcacggtgcaattccaccacgagtgcccgtggatcgt 28440349 Query: 442 cagtgccagcgatg 455 |||||||| |||| Sbjct: 28440348 aagtgccagtgatg 28440335 Score = 107 bits (54), Expect = 3e-20 Identities = 108/126 (85%) Strand = Plus / Minus Query: 322 aggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgct 381 |||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||| || Sbjct: 28428749 aggtgatgattacaagattaaggtgtggaattacaagacacaccgctgcctcttcacact 28428690 Query: 382 ccatggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgt 441 || || ||||||||||| || |||||||| || |||||| |||| |||| ||||| || Sbjct: 28428689 tcacgggcaccttgactatattcgcaccgtgcaattccaccacgaatacccatggatagt 28428630 Query: 442 cagtgc 447 ||||| Sbjct: 28428629 aagtgc 28428624
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 297 bits (150), Expect = 2e-77 Identities = 198/214 (92%) Strand = Plus / Minus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 28532586 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 28532527 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28532526 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 28532467 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28532466 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 28532407 Query: 294 acaagacacagccgctcttcgtttccggaggtga 327 || || |||||||||||||| ||||||||||| Sbjct: 28532406 acgccacgcagccgctcttcgtctccggaggtga 28532373 Score = 293 bits (148), Expect = 3e-76 Identities = 196/212 (92%) Strand = Plus / Minus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 28520966 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 28520907 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28520906 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 28520847 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28520846 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 28520787 Query: 294 acaagacacagccgctcttcgtttccggaggt 325 || || |||||||||||||| ||||||||| Sbjct: 28520786 acgccacgcagccgctcttcgtctccggaggt 28520755 Score = 139 bits (70), Expect = 9e-30 Identities = 118/134 (88%) Strand = Plus / Minus Query: 322 aggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgct 381 |||||| ||||||||||| ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 28531792 aggtgatgattacaagattaaggtatggaattacaagacacaccgttgcctcttcacgct 28531733 Query: 382 ccatggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgt 441 |||||||||||||||||||| ||||| || || |||||| ||||| |||||||||||| Sbjct: 28531732 tcatggccaccttgactacattcgcacggtgcaattccaccacgagtgcccgtggatcgt 28531673 Query: 442 cagtgccagcgatg 455 |||||||| |||| Sbjct: 28531672 aagtgccagtgatg 28531659 Score = 107 bits (54), Expect = 3e-20 Identities = 108/126 (85%) Strand = Plus / Minus Query: 322 aggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgct 381 |||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||| || Sbjct: 28520073 aggtgatgattacaagattaaggtgtggaattacaagacacaccgctgcctcttcacact 28520014 Query: 382 ccatggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgt 441 || || ||||||||||| || |||||||| || |||||| |||| |||| ||||| || Sbjct: 28520013 tcacgggcaccttgactatattcgcaccgtgcaattccaccacgaatacccatggatagt 28519954 Query: 442 cagtgc 447 ||||| Sbjct: 28519953 aagtgc 28519948
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 297 bits (150), Expect = 2e-77 Identities = 198/214 (92%) Strand = Plus / Minus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 35392 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 35333 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 35332 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 35273 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 35272 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 35213 Query: 294 acaagacacagccgctcttcgtttccggaggtga 327 || || |||||||||||||| ||||||||||| Sbjct: 35212 acgccacgcagccgctcttcgtctccggaggtga 35179 Score = 293 bits (148), Expect = 3e-76 Identities = 196/212 (92%) Strand = Plus / Minus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 23772 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 23713 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23712 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 23653 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 23652 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 23593 Query: 294 acaagacacagccgctcttcgtttccggaggt 325 || || |||||||||||||| ||||||||| Sbjct: 23592 acgccacgcagccgctcttcgtctccggaggt 23561 Score = 139 bits (70), Expect = 9e-30 Identities = 118/134 (88%) Strand = Plus / Minus Query: 322 aggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgct 381 |||||| ||||||||||| ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 34598 aggtgatgattacaagattaaggtatggaattacaagacacaccgttgcctcttcacgct 34539 Query: 382 ccatggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgt 441 |||||||||||||||||||| ||||| || || |||||| ||||| |||||||||||| Sbjct: 34538 tcatggccaccttgactacattcgcacggtgcaattccaccacgagtgcccgtggatcgt 34479 Query: 442 cagtgccagcgatg 455 |||||||| |||| Sbjct: 34478 aagtgccagtgatg 34465 Score = 107 bits (54), Expect = 3e-20 Identities = 108/126 (85%) Strand = Plus / Minus Query: 322 aggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgct 381 |||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||| || Sbjct: 22879 aggtgatgattacaagattaaggtgtggaattacaagacacaccgctgcctcttcacact 22820 Query: 382 ccatggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgt 441 || || ||||||||||| || |||||||| || |||||| |||| |||| ||||| || Sbjct: 22819 tcacgggcaccttgactatattcgcaccgtgcaattccaccacgaatacccatggatagt 22760 Query: 442 cagtgc 447 ||||| Sbjct: 22759 aagtgc 22754
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 293 bits (148), Expect = 3e-76 Identities = 196/212 (92%) Strand = Plus / Minus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 2079192 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 2079133 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2079132 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 2079073 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2079072 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 2079013 Query: 294 acaagacacagccgctcttcgtttccggaggt 325 || || |||||||||||||| ||||||||| Sbjct: 2079012 acgccacccagccgctcttcgtctccggaggt 2078981 Score = 131 bits (66), Expect = 2e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 322 aggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgct 381 |||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||| || Sbjct: 2078045 aggtgatgattacaagattaaggtgtggaattacaagacacaccgctgcctcttcacact 2077986 Query: 382 ccatggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgt 441 ||||| |||||||||||||| |||||||| || |||||| ||||| |||| ||||| || Sbjct: 2077985 tcatgggcaccttgactacattcgcaccgtgcaattccaccacgagtacccatggatagt 2077926 Query: 442 cagtgc 447 ||||| Sbjct: 2077925 aagtgc 2077920
>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1610_C11 Length = 104553 Score = 293 bits (148), Expect = 3e-76 Identities = 196/212 (92%) Strand = Plus / Minus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 4609 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 4550 Query: 174 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 233 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4549 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 4490 Query: 234 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 293 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4489 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 4430 Query: 294 acaagacacagccgctcttcgtttccggaggt 325 || || |||||||||||||| ||||||||| Sbjct: 4429 acgccacccagccgctcttcgtctccggaggt 4398 Score = 131 bits (66), Expect = 2e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 322 aggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgct 381 |||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||| || Sbjct: 3462 aggtgatgattacaagattaaggtgtggaattacaagacacaccgctgcctcttcacact 3403 Query: 382 ccatggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgt 441 ||||| |||||||||||||| |||||||| || |||||| ||||| |||| ||||| || Sbjct: 3402 tcatgggcaccttgactacattcgcaccgtgcaattccaccacgagtacccatggatagt 3343 Query: 442 cagtgc 447 ||||| Sbjct: 3342 aagtgc 3337
>ref|XM_323673.1| Neurospora crassa OR74A hypothetical protein (NCU10066.1) partial mRNA Length = 3672 Score = 133 bits (67), Expect = 5e-28 Identities = 187/227 (82%) Strand = Plus / Plus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||||||||||||||| ||||| | ||||| ||||| |||||||| |||||||| ||| Sbjct: 124 tgggactaccgcatgggtaccctgattgaccgattcgaagagcacgatggccccgtccgc 183 Query: 281 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaagatc 340 ||||| | ||||||||||||||||| |||||||| || || |||||||| ||||||||| Sbjct: 184 ggcgttgatttccacaagacacagcccctcttcgtatctggcggtgacgactacaagatc 243 Query: 341 aaggtgtggaactacaagacgcaccgctgcctcttcacgctccatggccaccttgactac 400 ||||| ||| | |||| | ||||||||||| || ||| | |||||| | |||||| Sbjct: 244 aaggtctggtctctccagactcggcgctgcctctttacactcaacggccacttggactac 303 Query: 401 atccgcaccgtccagttccacgacgagcacccgtggatcgtcagtgc 447 |||||||||||| |||||| |||||| || ||||| |||||||| Sbjct: 304 atccgcaccgtcttcttccaccacgagcttccttggattgtcagtgc 350
>ref|XM_952788.1| Neurospora crassa OR74A hypothetical protein (NCU10066.1) partial mRNA Length = 3672 Score = 133 bits (67), Expect = 5e-28 Identities = 187/227 (82%) Strand = Plus / Plus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||||||||||||||| ||||| | ||||| ||||| |||||||| |||||||| ||| Sbjct: 124 tgggactaccgcatgggtaccctgattgaccgattcgaagagcacgatggccccgtccgc 183 Query: 281 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaagatc 340 ||||| | ||||||||||||||||| |||||||| || || |||||||| ||||||||| Sbjct: 184 ggcgttgatttccacaagacacagcccctcttcgtatctggcggtgacgactacaagatc 243 Query: 341 aaggtgtggaactacaagacgcaccgctgcctcttcacgctccatggccaccttgactac 400 ||||| ||| | |||| | ||||||||||| || ||| | |||||| | |||||| Sbjct: 244 aaggtctggtctctccagactcggcgctgcctctttacactcaacggccacttggactac 303 Query: 401 atccgcaccgtccagttccacgacgagcacccgtggatcgtcagtgc 447 |||||||||||| |||||| |||||| || ||||| |||||||| Sbjct: 304 atccgcaccgtcttcttccaccacgagcttccttggattgtcagtgc 350
>gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172175 Score = 113 bits (57), Expect = 5e-22 Identities = 176/213 (82%), Gaps = 2/213 (0%) Strand = Plus / Plus Query: 147 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 206 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 75913 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 75972 Query: 207 gggtcgtccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacg 266 | ||| ||||| ||||||||||||| ||| ||| |||||||| ||||||||||||| Sbjct: 75973 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 76032 Query: 267 acggccccgtacgcggcgtccacttccacaagacaca-gccgctcttcgtttccggaggt 325 |||| || || || ||||| ||||||| || || | |||||||||||| || || || Sbjct: 76033 acggaccggtgcgaggcgtggccttccaccag-cagatgccgctcttcgtctctggcggc 76091 Query: 326 gacgattacaagatcaaggtgtggaactacaag 358 ||||| ||||||||||||||||||||||||||| Sbjct: 76092 gacgactacaagatcaaggtgtggaactacaag 76124
>gb|AC105264.3| Drosophila melanogaster 3L BAC RP98-17K18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177583 Score = 113 bits (57), Expect = 5e-22 Identities = 176/213 (82%), Gaps = 2/213 (0%) Strand = Plus / Minus Query: 147 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 206 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 33100 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 33041 Query: 207 gggtcgtccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacg 266 | ||| ||||| ||||||||||||| ||| ||| |||||||| ||||||||||||| Sbjct: 33040 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 32981 Query: 267 acggccccgtacgcggcgtccacttccacaagacaca-gccgctcttcgtttccggaggt 325 |||| || || || ||||| ||||||| || || | |||||||||||| || || || Sbjct: 32980 acggaccggtgcgaggcgtggccttccaccag-cagatgccgctcttcgtctctggcggc 32922 Query: 326 gacgattacaagatcaaggtgtggaactacaag 358 ||||| ||||||||||||||||||||||||||| Sbjct: 32921 gacgactacaagatcaaggtgtggaactacaag 32889
>gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166862 Score = 113 bits (57), Expect = 5e-22 Identities = 176/213 (82%), Gaps = 2/213 (0%) Strand = Plus / Minus Query: 147 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 206 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 118841 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 118782 Query: 207 gggtcgtccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacg 266 | ||| ||||| ||||||||||||| ||| ||| |||||||| ||||||||||||| Sbjct: 118781 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 118722 Query: 267 acggccccgtacgcggcgtccacttccacaagacaca-gccgctcttcgtttccggaggt 325 |||| || || || ||||| ||||||| || || | |||||||||||| || || || Sbjct: 118721 acggaccggtgcgaggcgtggccttccaccag-cagatgccgctcttcgtctctggcggc 118663 Query: 326 gacgattacaagatcaaggtgtggaactacaag 358 ||||| ||||||||||||||||||||||||||| Sbjct: 118662 gacgactacaagatcaaggtgtggaactacaag 118630
>ref|NM_167908.1| Drosophila melanogaster -coatomer protein CG7961-RB, transcript variant B (alphaCop), mRNA Length = 3992 Score = 113 bits (57), Expect = 5e-22 Identities = 176/213 (82%), Gaps = 2/213 (0%) Strand = Plus / Plus Query: 147 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 206 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 180 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 239 Query: 207 gggtcgtccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacg 266 | ||| ||||| ||||||||||||| ||| ||| |||||||| ||||||||||||| Sbjct: 240 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 299 Query: 267 acggccccgtacgcggcgtccacttccacaagacaca-gccgctcttcgtttccggaggt 325 |||| || || || ||||| ||||||| || || | |||||||||||| || || || Sbjct: 300 acggaccggtgcgaggcgtggccttccaccag-cagatgccgctcttcgtctctggcggc 358 Query: 326 gacgattacaagatcaaggtgtggaactacaag 358 ||||| ||||||||||||||||||||||||||| Sbjct: 359 gacgactacaagatcaaggtgtggaactacaag 391
>ref|NM_058047.3| Drosophila melanogaster -coatomer protein CG7961-RA, transcript variant A (alphaCop), mRNA Length = 3979 Score = 113 bits (57), Expect = 5e-22 Identities = 176/213 (82%), Gaps = 2/213 (0%) Strand = Plus / Plus Query: 147 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 206 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 167 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 226 Query: 207 gggtcgtccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacg 266 | ||| ||||| ||||||||||||| ||| ||| |||||||| ||||||||||||| Sbjct: 227 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 286 Query: 267 acggccccgtacgcggcgtccacttccacaagacaca-gccgctcttcgtttccggaggt 325 |||| || || || ||||| ||||||| || || | |||||||||||| || || || Sbjct: 287 acggaccggtgcgaggcgtggccttccaccag-cagatgccgctcttcgtctctggcggc 345 Query: 326 gacgattacaagatcaaggtgtggaactacaag 358 ||||| ||||||||||||||||||||||||||| Sbjct: 346 gacgactacaagatcaaggtgtggaactacaag 378
>gb|AY075425.1| Drosophila melanogaster LD46584 full length cDNA Length = 3969 Score = 113 bits (57), Expect = 5e-22 Identities = 176/213 (82%), Gaps = 2/213 (0%) Strand = Plus / Plus Query: 147 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 206 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 147 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 206 Query: 207 gggtcgtccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacg 266 | ||| ||||| ||||||||||||| ||| ||| |||||||| ||||||||||||| Sbjct: 207 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 266 Query: 267 acggccccgtacgcggcgtccacttccacaagacaca-gccgctcttcgtttccggaggt 325 |||| || || || ||||| ||||||| || || | |||||||||||| || || || Sbjct: 267 acggaccggtgcgaggcgtggccttccaccag-cagatgccgctcttcgtctctggcggc 325 Query: 326 gacgattacaagatcaaggtgtggaactacaag 358 ||||| ||||||||||||||||||||||||||| Sbjct: 326 gacgactacaagatcaaggtgtggaactacaag 358
>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete sequence Length = 303191 Score = 113 bits (57), Expect = 5e-22 Identities = 176/213 (82%), Gaps = 2/213 (0%) Strand = Plus / Minus Query: 147 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 206 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 110228 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 110169 Query: 207 gggtcgtccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacg 266 | ||| ||||| ||||||||||||| ||| ||| |||||||| ||||||||||||| Sbjct: 110168 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 110109 Query: 267 acggccccgtacgcggcgtccacttccacaagacaca-gccgctcttcgtttccggaggt 325 |||| || || || ||||| ||||||| || || | |||||||||||| || || || Sbjct: 110108 acggaccggtgcgaggcgtggccttccaccag-cagatgccgctcttcgtctctggcggc 110050 Query: 326 gacgattacaagatcaaggtgtggaactacaag 358 ||||| ||||||||||||||||||||||||||| Sbjct: 110049 gacgactacaagatcaaggtgtggaactacaag 110017
>gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, region 62A10-62B5, P1 clones DS02777, DS03222, DS02345, and DS04808, complete sequence Length = 257867 Score = 113 bits (57), Expect = 5e-22 Identities = 176/213 (82%), Gaps = 2/213 (0%) Strand = Plus / Minus Query: 147 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 206 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 33394 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 33335 Query: 207 gggtcgtccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacg 266 | ||| ||||| ||||||||||||| ||| ||| |||||||| ||||||||||||| Sbjct: 33334 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 33275 Query: 267 acggccccgtacgcggcgtccacttccacaagacaca-gccgctcttcgtttccggaggt 325 |||| || || || ||||| ||||||| || || | |||||||||||| || || || Sbjct: 33274 acggaccggtgcgaggcgtggccttccaccag-cagatgccgctcttcgtctctggcggc 33216 Query: 326 gacgattacaagatcaaggtgtggaactacaag 358 ||||| ||||||||||||||||||||||||||| Sbjct: 33215 gacgactacaagatcaaggtgtggaactacaag 33183
>emb|AJ011114.1|DME011114 Drosophila melanogaster mRNA for coatomer alpha subunit Length = 3967 Score = 113 bits (57), Expect = 5e-22 Identities = 176/213 (82%), Gaps = 2/213 (0%) Strand = Plus / Plus Query: 147 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 206 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 151 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 210 Query: 207 gggtcgtccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacg 266 | ||| ||||| ||||||||||||| ||| ||| |||||||| ||||||||||||| Sbjct: 211 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 270 Query: 267 acggccccgtacgcggcgtccacttccacaagacaca-gccgctcttcgtttccggaggt 325 |||| || || || ||||| ||||||| || || | |||||||||||| || || || Sbjct: 271 acggaccggtgcgaggcgtggccttccaccag-cagatgccgctcttcgtctctggcggc 329 Query: 326 gacgattacaagatcaaggtgtggaactacaag 358 ||||| ||||||||||||||||||||||||||| Sbjct: 330 gacgactacaagatcaaggtgtggaactacaag 362
>dbj|AK110077.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-F05, full insert sequence Length = 4009 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 323 ggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgctc 382 |||||||| |||||||||||||||||||| ||||||| | | ||||||||||| ||| Sbjct: 427 ggtgacgactacaagatcaaggtgtggaatcacaagacccgcaagtgcctcttcaccctc 486 Query: 383 catggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgtc 442 | |||||||| |||||| ||||||||||| |||||| |||||||||| |||||| || Sbjct: 487 aacggccacctcgactacgtccgcaccgtcttcttccaccacgagcacccctggatcctc 546 Query: 443 ag 444 || Sbjct: 547 ag 548 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 114 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 173 ||||||| || ||||||||| ||||| ||||| ||||||||| ||||||||||||||| Sbjct: 218 agatgctcacaaagttcgagtccaagtcgaaccgcgtcaagggcatcgccttccacccgc 277 Query: 174 g 174 | Sbjct: 278 g 278
>ref|XM_655538.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3026.2), mRNA Length = 3633 Score = 87.7 bits (44), Expect = 3e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||| ||||| ||||| || ||| ||||||| || || |||||||||||||| || || Sbjct: 106 tgggattaccgtatgggaacactcatcgaccgatttgaggagcacgacggccctgttcgt 165 Query: 281 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaagatc 340 ||| | |||| ||| || ||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 166 ggcattgactttcaccctacgcagcccctctttgtttccggaggtgacgactacaagatc 225 Query: 341 aaggtgtggaactacaagac 360 ||||| ||||||||| |||| Sbjct: 226 aaggtctggaactaccagac 245
>gb|AF053883.1|AF053883 Emericella nidulans coatomer alpha subunit (sodVIC) mRNA, complete cds Length = 3618 Score = 87.7 bits (44), Expect = 3e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||| ||||| ||||| || ||| ||||||| || || |||||||||||||| || || Sbjct: 106 tgggattaccgtatgggaacactcatcgaccgatttgaggagcacgacggccctgttcgt 165 Query: 281 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaagatc 340 ||| | |||| ||| || ||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 166 ggcattgactttcaccctacgcagcccctctttgtttccggaggtgacgactacaagatc 225 Query: 341 aaggtgtggaactacaagac 360 ||||| ||||||||| |||| Sbjct: 226 aaggtctggaactaccagac 245
>ref|XM_504161.1| Yarrowia lipolytica CLIB122, YALI0E19767g predicted mRNA Length = 3735 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||||||||| ||||| ||||| | ||||| ||||| || ||||| |||||||| || Sbjct: 130 tgggactaccgaatgggaaccctggtggaccggttcgaggaccacgatggccccgttcga 189 Query: 281 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaagatc 340 || ||| ||||||||||||| |||||||| || || ||| | || ||||| ||||||||| Sbjct: 190 ggtgtcgacttccacaagacccagccgctgtttgtgtcctgtggcgacgactacaagatc 249 Query: 341 aaggt 345 ||||| Sbjct: 250 aaggt 254
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||||||||| ||||| ||||| | ||||| ||||| || ||||| |||||||| || Sbjct: 2360254 tgggactaccgaatgggaaccctggtggaccggttcgaggaccacgatggccccgttcga 2360313 Query: 281 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaagatc 340 || ||| ||||||||||||| |||||||| || || ||| | || ||||| ||||||||| Sbjct: 2360314 ggtgtcgacttccacaagacccagccgctgtttgtgtcctgtggcgacgactacaagatc 2360373 Query: 341 aaggt 345 ||||| Sbjct: 2360374 aaggt 2360378
>gb|AC067938.1|AC067938 Neurospora crassa chromosome 7, clone G21-F8, complete sequence Length = 37068 Score = 79.8 bits (40), Expect = 7e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||||||||||||||| ||||| | ||||| ||||| |||||||| |||||||| ||| Sbjct: 23950 tgggactaccgcatgggtaccctgattgaccgattcgaagagcacgatggccccgtccgc 23891 Query: 281 ggcgtccacttccacaagacacag 304 ||||| | ||||||||||||||| Sbjct: 23890 ggcgttgatttccacaagacacag 23867 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 301 acagccgctcttcgtttccggaggtgacgattacaagatcaaggtgtggaactacaagac 360 |||||| |||||||| || || |||||||| |||||||||||||| ||| | |||| Sbjct: 23802 acagcccctcttcgtatctggcggtgacgactacaagatcaaggtctggtctctccagac 23743 Query: 361 gcaccgctgcctcttcacgctccatggccaccttgactacatccgcaccgtccagttcca 420 | ||||||||||| || ||| | |||||| | |||||||||||||||||| ||||| Sbjct: 23742 tcggcgctgcctctttacactcaacggccacttggactacatccgcaccgtcttcttcca 23683 Query: 421 cgacgagcacccgtggatcgtcagtgc 447 | |||||| || ||||| |||||||| Sbjct: 23682 ccacgagcttccttggattgtcagtgc 23656
>ref|XM_388115.1| Gibberella zeae PH-1 chromosome 4 conserved hypothetical protein (FG07939.1) partial mRNA Length = 3663 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 260 gagcacgacggccccgtacgcggcgtccacttccacaagacacagccgctcttcgtttcc 319 |||||||| || ||||| || |||||| | |||||||||||||| ||||||||||| ||| Sbjct: 163 gagcacgatggtcccgtccgtggcgtcgatttccacaagacacaaccgctcttcgtctcc 222 Query: 320 ggaggtgacgattacaagatcaa 342 || ||||| || ||||||||||| Sbjct: 223 ggcggtgatgactacaagatcaa 245
>ref|XM_755227.1| Ustilago maydis 521 hypothetical protein (UM04173.1) partial mRNA Length = 3717 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 323 ggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgctc 382 |||||||| ||||||||||||||||||||| ||||||||| | || |||||||| ||| Sbjct: 214 ggtgacgactacaagatcaaggtgtggaaccacaagacgcgcaaatgtctcttcactctc 273 Query: 383 catggccaccttgactacatccgcaccgtc 412 | |||||||| |||||| | ||||||||| Sbjct: 274 aacggccacctcgactacgtacgcaccgtc 303
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||||||||| |||||||| || | ||||| ||||| |||||||| |||||||| ||| Sbjct: 312976 tgggactaccgtatgggcacactgattgaccgattcgaagagcacgatggccccgtccgc 312917 Query: 281 ggcgtccacttccacaagac 300 || ||| ||||||||||||| Sbjct: 312916 ggtgtcgacttccacaagac 312897
>emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC DP35C12 of chromosome 5 of Podospora anserina Length = 101256 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||||||||| |||||||| || | ||||| ||||| |||||||| |||||||| ||| Sbjct: 9219 tgggactaccgtatgggcacactgattgaccgattcgaagagcacgatggccccgtccgc 9278 Query: 281 ggcgtccacttccacaagac 300 || ||| ||||||||||||| Sbjct: 9279 ggtgtcgacttccacaagac 9298
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 316 ttccggaggtgacgattacaagatcaaggtgtggaactacaa 357 |||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 123767 ttccggtggtgatgattacaagatcaaggtgtggaactacaa 123726
>ref|XM_571751.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 3938 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 316 ttccggaggtgacgattacaagatcaaggtgtggaactacaa 357 |||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 364 ttccggtggtgatgattacaagatcaaggtgtggaactacaa 405
>ref|NM_104882.1| Arabidopsis thaliana protein transporter/ transporter AT1G62020 mRNA, complete cds Length = 3947 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 302 cagccgctcttcgtttccggaggtgacgattacaagatcaaggtgtggaactacaa 357 ||||| |||||||| |||||||| || ||||||||||| || |||||||||||||| Sbjct: 187 cagcctctcttcgtctccggaggggatgattacaagattaaagtgtggaactacaa 242
>dbj|AB230542.1| Aspergillus oryzae cDNA, contig sequence: AoEST7432 Length = 621 Score = 60.0 bits (30), Expect = 7e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||| || |||||||| |||||| | ||||| ||||| || ||||| |||||||| || Sbjct: 261 tgggattatcgcatgggaaccctcattgaccgtttcgaagaacacgatggccccgttcga 320 Query: 281 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaagatc 340 ||| | ||||||| ||||| || |||||||| |||||||| || || ||||||||| Sbjct: 321 ggcattgacttccatcctacacaacccctcttcgtgtccggaggcgatgactacaagatc 380 Query: 341 aaggtgtggaacta 354 || || |||||||| Sbjct: 381 aaagtttggaacta 394
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 60.0 bits (30), Expect = 7e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 ||||| || |||||||| |||||| | ||||| ||||| || ||||| |||||||| || Sbjct: 3615744 tgggattatcgcatgggaaccctcattgaccgtttcgaagaacacgatggccccgttcga 3615803 Query: 281 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaagatc 340 ||| | ||||||| ||||| || |||||||| |||||||| || || ||||||||| Sbjct: 3615804 ggcattgacttccatcctacacaacccctcttcgtgtccggaggcgatgactacaagatc 3615863 Query: 341 aaggtgtggaacta 354 || || |||||||| Sbjct: 3615864 aaagtttggaacta 3615877
>ref|NM_127711.2| Arabidopsis thaliana protein transporter/ transporter AT2G21390 mRNA, complete cds Length = 4189 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 116 atgctgaccaagttcgagaccaagagcaaccgggtcaaggg 156 |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 233 atgctgaccaagttcgagaccaagagtaaccgagttaaggg 273 Score = 40.1 bits (20), Expect = 6.1 Identities = 56/68 (82%) Strand = Plus / Plus Query: 290 ttccacaagacacagccgctcttcgtttccggaggtgacgattacaagatcaaggtgtgg 349 |||||||| ||||||| | ||||| || ||||| || ||||||||||| || || ||| Sbjct: 407 ttccacaactcacagcctttattcgtctctggaggggatgattacaagattaaagtttgg 466 Query: 350 aactacaa 357 |||||||| Sbjct: 467 aactacaa 474
>ref|XM_791712.1| PREDICTED: Strongylocentrotus purpuratus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP) (LOC592176), mRNA Length = 4208 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 317 tccggaggtgacgattacaagatcaaggtgtggaactacaa 357 ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 172 tccggaggtgatgactacaagatcaaggtctggaactacaa 212
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 116 atgctgaccaagttcgagaccaagagcaaccgggtcaaggg 156 |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 49467 atgctgaccaagttcgagaccaagagtaaccgagttaaggg 49507
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH081N08, complete sequence Length = 56991 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 322 aggtgacgattacaagatcaaggtgtggaactacaagacgcaccgctgcctcttcacgct 381 |||||| ||||||||||| || || ||||||||||| || ||| || |||||||| || Sbjct: 51977 aggtgatgattacaagattaaagtttggaactacaaaacacacaagtgtctcttcactct 52036 Query: 382 ccatggccaccttgactacatccgcaccgtccagttccacgacgagcacccgtggatcgt 441 | ||| || || || ||||||||||| || |||||||| ||||| ||| ||||| || Sbjct: 52037 tcttggtcatctcgattacatccgcacggttcagttccatcacgagtgcccttggattgt 52096 Query: 442 cagtgccagcga 453 ||| |||||||| Sbjct: 52097 cagcgccagcga 52108 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 116 atgctgaccaagttcgagaccaagagcaacc 146 |||||||||||||||||||||| ||||||| Sbjct: 51526 atgctgaccaagttcgagaccagtagcaacc 51556
>ref|XM_360968.1| Magnaporthe grisea 70-15 hypothetical protein (MG03511.4) partial mRNA Length = 3663 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 221 tgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtacgc 280 |||||||| ||||||||||| | | ||||| ||||| || |||||||| || || ||| Sbjct: 124 tgggactatcgcatgggcacgttgattgaccgtttcgaggaacacgacggtcctgttcgc 183 Query: 281 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaagatc 340 | | || |||| ||||| || || || |||||||| || || |||||||| ||||||||| Sbjct: 184 gccatcgactttcacaaaacgcaacccctcttcgtctcgggcggtgacgactacaagatc 243 Query: 341 aa 342 || Sbjct: 244 aa 245
>gb|BC075251.1| Xenopus laevis coatomer protein complex, subunit alpha, mRNA (cDNA clone MGC:84477 IMAGE:7020631), complete cds Length = 3934 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 113 gagatgctgaccaagttcgagaccaag 139 ||||||||||| ||||||||||||||| Sbjct: 47 gagatgctgacgaagttcgagaccaag 73 Score = 40.1 bits (20), Expect = 6.1 Identities = 125/160 (78%) Strand = Plus / Plus Query: 219 tgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtac 278 ||||||| ||||||||| |||| || ||||| || || ||||||||||| ||||| | Sbjct: 153 tgtgggattaccgcatgtgcactcttatcgacaagtttgatgagcacgacggtcccgtcc 212 Query: 279 gcggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaaga 338 | ||| | ||||||||||| ||||| || || || || || || || ||||| || | Sbjct: 213 gtggcattgacttccacaagcagcagccactgtttgtatctgggggagatgattataaaa 272 Query: 339 tcaaggtgtggaactacaagacgcaccgctgcctcttcac 378 |||||| |||||| |||||| | ||||||||||||||| Sbjct: 273 tcaaggcgtggaattacaagctccgccgctgcctcttcac 312
>gb|AY020473.1| Oryza sativa microsatellite MRG2798 containing (GA)X19, genomic sequence Length = 238 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 114 agatgctgaccaagttcgagaccaaga 140 |||||||||||||||||||||| |||| Sbjct: 27 agatgctgaccaagttcgagacgaaga 1
>gb|AY648754.1| Danio rerio cotamer alpha mRNA, complete cds Length = 4096 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 332 tacaagatcaaggtgtggaactacaag 358 |||||||||||||| |||||||||||| Sbjct: 335 tacaagatcaaggtttggaactacaag 361
>ref|NM_001001941.1| Danio rerio coatomer protein complex, subunit alpha (copa), mRNA Length = 4261 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 332 tacaagatcaaggtgtggaactacaag 358 |||||||||||||| |||||||||||| Sbjct: 398 tacaagatcaaggtttggaactacaag 424
>gb|AY294009.1| Danio rerio coatomer protein complex subunit alpha (copa) mRNA, complete cds Length = 4261 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 332 tacaagatcaaggtgtggaactacaag 358 |||||||||||||| |||||||||||| Sbjct: 398 tacaagatcaaggtttggaactacaag 424
>ref|NM_001031405.1| Gallus gallus coatomer protein complex, subunit alpha (COPA), mRNA Length = 4338 Score = 44.1 bits (22), Expect = 0.39 Identities = 70/86 (81%) Strand = Plus / Plus Query: 182 tggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatgggcacc 241 ||||||||| ||||||| || | || ||| ||||| |||||||||| || ||| ||||| Sbjct: 128 tggatcctcaccagcctacataatggcgtcatccagctgtgggactatcgtatgtgcacc 187 Query: 242 ctcctcgaccgcttcgacgagcacga 267 || ||||| |||||||||||||| Sbjct: 188 cttatcgacaagttcgacgagcacga 213 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 gatgctgaccaagttcgagaccaa 138 ||||||||| |||||||||||||| Sbjct: 61 gatgctgactaagttcgagaccaa 84
>emb|AJ851796.1| Gallus gallus mRNA for hypothetical protein, clone 34d13 Length = 4338 Score = 44.1 bits (22), Expect = 0.39 Identities = 70/86 (81%) Strand = Plus / Plus Query: 182 tggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatgggcacc 241 ||||||||| ||||||| || | || ||| ||||| |||||||||| || ||| ||||| Sbjct: 128 tggatcctcaccagcctacataatggcgtcatccagctgtgggactatcgtatgtgcacc 187 Query: 242 ctcctcgaccgcttcgacgagcacga 267 || ||||| |||||||||||||| Sbjct: 188 cttatcgacaagttcgacgagcacga 213 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 gatgctgaccaagttcgagaccaa 138 ||||||||| |||||||||||||| Sbjct: 61 gatgctgactaagttcgagaccaa 84
>emb|CR860182.1| Pongo pygmaeus mRNA; cDNA DKFZp469O221 (from clone DKFZp469O221) Length = 3358 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 113 gagatgctgaccaagttcgagaccaagagc 142 |||||||| ||||| ||||||||||||||| Sbjct: 80 gagatgctaaccaaattcgagaccaagagc 109
>dbj|AB179215.1| Macaca fascicularis testis cDNA clone: QtsA-15330, similar to human coatomer protein complex, subunit alpha (COPA), mRNA, RefSeq: NM_004371.2 Length = 2686 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 113 gagatgctgaccaagttcgagaccaagagc 142 |||||||| ||||| ||||||||||||||| Sbjct: 103 gagatgctaaccaaattcgagaccaagagc 132
>gb|AC005500.2| Homo sapiens 22q11 PAC Clone Clone p52f6 In DGCR Region, complete sequence Length = 192592 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 23 cagcccagatccacccaccccacctcacct 52 ||||||||| |||||||||||| ||||||| Sbjct: 83600 cagcccagaaccacccaccccatctcacct 83629
>gb|AC007731.16| Homo sapiens chromosome 22 clone b562f10 map 22q11, complete sequence Length = 182617 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 23 cagcccagatccacccaccccacctcacct 52 ||||||||| |||||||||||| ||||||| Sbjct: 88654 cagcccagaaccacccaccccatctcacct 88683
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 83 gccgccggagagggagggcggcggcg 108 |||||||||||| ||||||||||||| Sbjct: 16713778 gccgccggagagcgagggcggcggcg 16713753
>emb|AJ580822.1|LCO580822 Lotus corniculatus var. japonicus gene for coatomer alpha subunit-like protein Length = 11115 Score = 44.1 bits (22), Expect = 0.39 Identities = 70/86 (81%) Strand = Plus / Plus Query: 182 tggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatgggcacc 241 |||||||| ||||| || ||||| || || ||||| | ||||||||||| ||||| || Sbjct: 2476 tggatccttgccagtcttcacagtggtgtgatccagctatgggactaccggatggggact 2535 Query: 242 ctcctcgaccgcttcgacgagcacga 267 ||| | ||| | |||||||||||||| Sbjct: 2536 ctcattgacagattcgacgagcacga 2561
>gb|AC004392.1|F8K4 Arabidopsis thaliana chromosome 1 BAC F8K4 sequence, complete sequence Length = 115641 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 329 gattacaagatcaaggtgtggaactacaa 357 ||||||||||| || |||||||||||||| Sbjct: 97072 gattacaagattaaagtgtggaactacaa 97100
>emb|AL844160.4| Mouse DNA sequence from clone RP23-340N6 on chromosome 4, complete sequence Length = 207022 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ccacccaccccacctcacctc 53 ||||||||||||||||||||| Sbjct: 63413 ccacccaccccacctcacctc 63433
>ref|XM_479654.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggagagggagggcggcggcg 108 |||||||||||||||||||| Sbjct: 261 ggagagggagggcggcggcg 242
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gggcctcgccttccacccgc 173 |||||||||||||||||||| Sbjct: 1273529 gggcctcgccttccacccgc 1273548
>gb|AY726816.1| Uncultured gamma proteobacterium clone JL-ETNP-R57 16S ribosomal RNA gene, partial sequence Length = 1229 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 acccgtggatcgtcagtgccagcg 452 |||||| ||||||||||||||||| Sbjct: 1084 acccgttgatcgtcagtgccagcg 1107
>gb|AC138192.7| Mus musculus chromosome 10, clone RP23-276D2, complete sequence Length = 209937 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 agatccacccaccccacctc 48 |||||||||||||||||||| Sbjct: 26759 agatccacccaccccacctc 26740
>emb|AL391665.28| Human DNA sequence from clone RP11-519K18 on chromosome 10 Contains the 3' end of the RAI17 gene for retinoic acid induced 17, the 5' end of the PPIF gene for peptidylprolyl isomerase F (cyclophilin F) and two CpG islands, complete sequence Length = 159866 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cccaccccacctcacctctc 55 |||||||||||||||||||| Sbjct: 145125 cccaccccacctcacctctc 145106
>emb|AL139398.20| Human DNA sequence from clone RP11-528B10 on chromosome Xp11.21-11.23, complete sequence Length = 125999 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 gatccacccaccccacctcacctc 53 ||||||||||||||||||| |||| Sbjct: 48095 gatccacccaccccacctcccctc 48118
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 240 ccctcctcgaccgcttcgacgagcacgacggc 271 ||||||||||||| ||| ||||||||||||| Sbjct: 258061 ccctcctcgaccggctcgtcgagcacgacggc 258092
>gb|AC164175.5| Mus musculus 10 BAC RP23-251I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180924 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 agatccacccaccccacctc 48 |||||||||||||||||||| Sbjct: 63988 agatccacccaccccacctc 64007
>emb|AL929547.13| Mouse DNA sequence from clone RP23-180L23 on chromosome 11 Contains part of a novel gene and a CpG island, complete sequence Length = 218414 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cagcccagatccacccaccc 42 |||||||||||||||||||| Sbjct: 30415 cagcccagatccacccaccc 30434
>gb|AC148696.1| Macaca mulatta Major Histocompatibility Complex BAC MMU246K06, complete sequence Length = 165811 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 caccccacctcacctctctc 57 |||||||||||||||||||| Sbjct: 66153 caccccacctcacctctctc 66172
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggagagggagggcggcggcg 108 |||||||||||||||||||| Sbjct: 12009981 ggagagggagggcggcggcg 12009962
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggagagggagggcggcggcg 108 |||||||||||||||||||| Sbjct: 114375 ggagagggagggcggcggcg 114394
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gccgccggagagggagggcggcgg 106 ||||||||||| |||||||||||| Sbjct: 29473091 gccgccggagacggagggcggcgg 29473114
>gb|AC139667.5| Homo sapiens 3 BAC RP11-88B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135668 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ccacccaccccacctcacct 52 |||||||||||||||||||| Sbjct: 123739 ccacccaccccacctcacct 123720
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 caccccacctcacctctctc 57 |||||||||||||||||||| Sbjct: 1965705 caccccacctcacctctctc 1965686
>gb|AF074705.2|AF074705 Pseudomonas aeruginosa dihydroaeruginoic acid synthetase (pchE), pyochelin synthetase (pchF), reductase (pchG), ABC transporter (pchH), and ABC transporter (pchI) genes, complete cds Length = 15023 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ggatcctcgccagcctccac 202 |||||||||||||||||||| Sbjct: 8014 ggatcctcgccagcctccac 7995
>gb|AE004839.1| Pseudomonas aeruginosa PAO1, section 400 of 529 of the complete genome Length = 17071 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ggatcctcgccagcctccac 202 |||||||||||||||||||| Sbjct: 9736 ggatcctcgccagcctccac 9755
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 caccccacctcacctctctc 57 |||||||||||||||||||| Sbjct: 1056271 caccccacctcacctctctc 1056252
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gccgccggagagggagggcggcgg 106 ||||||||||| |||||||||||| Sbjct: 37597 gccgccggagacggagggcggcgg 37620
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggagagggagggcggcggcg 108 |||||||||||||||||||| Sbjct: 29710 ggagagggagggcggcggcg 29729
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggagagggagggcggcggcg 108 |||||||||||||||||||| Sbjct: 114375 ggagagggagggcggcggcg 114394
>dbj|AK064841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G03, full insert sequence Length = 1917 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggagagggagggcggcggcg 108 |||||||||||||||||||| Sbjct: 261 ggagagggagggcggcggcg 242
>emb|AL672229.12| Mouse DNA sequence from clone RP23-335A6 on chromosome 17, complete sequence Length = 187977 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 caccccacctcacctctctc 57 |||||||||||||||||||| Sbjct: 78848 caccccacctcacctctctc 78829 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,498,141 Number of Sequences: 3902068 Number of extensions: 3498141 Number of successful extensions: 81949 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81167 Number of HSP's gapped (non-prelim): 768 length of query: 455 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 433 effective length of database: 17,147,199,772 effective search space: 7424737501276 effective search space used: 7424737501276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
