ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl19d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contain... 31 0.72 
>FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contains:|
           Fibrinopeptide A] (Fragment)
          Length = 966

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 20/60 (33%), Positives = 25/60 (41%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +G GG W    R E  TG
Sbjct: 658 TEPNTGSAQGGSWSTGGRTEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWSTGGRTEPNTG 717



 Score = 31.2 bits (69), Expect = 0.72
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T            R + N  +G GG W    R E  TG
Sbjct: 640 TEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWSTGGRTEPNTGSGQGGSWGTGGRTEPNTG 699



 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T            R + N  +G GG W    R E  TG
Sbjct: 676 TEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWSTGGRTEPNTGSGQGGSWGTGGRTEPNTG 735



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/60 (33%), Positives = 25/60 (41%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +G GG W    R E  TG
Sbjct: 424 TEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWGTGGRTEPNTG 483



 Score = 29.3 bits (64), Expect = 2.7
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +  GG W    R E  TG
Sbjct: 514 TEPNTGSAQGGSWSTGGRTEPNTGSAKGGSWGTGGRTEPNTGSAKGGSWSTGGRTEPNTG 573



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +  GG W    R E  TG
Sbjct: 622 TEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWSTGGRTEPNTG 681



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +  GG W    R E  TG
Sbjct: 550 TEPNTGSAKGGSWSTGGRTEPNTGSAKGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTG 609



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/60 (30%), Positives = 23/60 (38%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T            R + N  +  GG W    R E  TG
Sbjct: 532 TEPNTGSAKGGSWGTGGRTEPNTGSAKGGSWSTGGRTEPNTGSAKGGSWGTGGRTEPNTG 591



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/60 (30%), Positives = 23/60 (38%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T            R + N  +  GG W    R E  TG
Sbjct: 496 TEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWSTGGRTEPNTGSAKGGSWGTGGRTEPNTG 555



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +  GG W    R E  TG
Sbjct: 478 TEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWSTGGRTEPNTG 537



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +  GG W    R E  TG
Sbjct: 604 TEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTG 663



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +  GG W    R E  TG
Sbjct: 586 TEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTG 645



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +  GG W    R E  TG
Sbjct: 568 TEPNTGSAKGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTG 627



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +  GG W    R E  TG
Sbjct: 694 TEPNTGSGQGGSWSTGGRTEPNTGSGQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTG 753



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +  GG W    R E  TG
Sbjct: 460 TEPNTGSGQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTG 519



 Score = 27.7 bits (60), Expect = 7.9
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -2

Query: 180 TKPDTGRPGGLSFPADGRIASGTEIXXXXXXGAPTRRDWNLETGGGGDWRRRFRIEDRTG 1
           T+P+TG   G S+   GR    T        G   R + N  +  GG W    R E  TG
Sbjct: 442 TEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTG 501


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,805,950
Number of Sequences: 219361
Number of extensions: 316822
Number of successful extensions: 991
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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