>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +1

Query: 205 PNPARRRERGRNHSPRPPPAESLAARPHVFIPRLGRRCAERERSGGAELSLA 360
           P+ +R R R R+ SP P PA     RP    P +G +  + E + G E   A
Sbjct: 503 PSQSRSRSRSRSQSPSPSPAREKLTRP-AASPAVGEKLKKTEPAAGKETGAA 553

>CWC22_CRYNE (Q5KFX4) Pre-mRNA-splicing factor CWC22|
          Length = 831

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +1

Query: 166 RGRISANQPQFLLPNPARRRERGRNHSPRPPPAESLAARPHVFIPRLGRRCAERERS 336
           R R  +++P+   P P RRR    + SP PPP    +       P   RR A+  RS
Sbjct: 735 RRRQYSDEPRSPSPPPRRRRYSDDSRSPSPPPRRRYSGDSRSPSPPPRRRYADDSRS 791

>OLIG1_MOUSE (Q9JKN5) Oligodendrocyte transcription factor 1 (Oligo1)|
           (Oligodendrocyte-specific bHLH transcription factor 1)
          Length = 260

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +1

Query: 178 SANQPQFLLPNPARRRERGRNHSPRPPPAESLAARPHV----FIPRLGRRCAERERSGGA 345
           S++    LLP PAR +       PR P  ES  AR          +L R+   RER    
Sbjct: 49  SSSSTASLLPKPAREKAEAPLAEPRGPAPESGGARADAKEEQQQQQLRRKINSRERKRMQ 108

Query: 346 ELSLAV 363
           +L+LA+
Sbjct: 109 DLNLAM 114

>OLIG1_RAT (Q9WUQ3) Oligodendrocyte transcription factor 1 (Oligo1) (Olg-1|
           bHLH protein)
          Length = 261

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +1

Query: 178 SANQPQFLLPNPARRRERGRNHSPRPPPAESLAARPHV----FIPRLGRRCAERERSGGA 345
           S++    LLP PAR +       PR P  ES  AR          +L R+   RER    
Sbjct: 50  SSSSTASLLPKPAREKPEAPLAEPRGPAPESGGARADAKEEQQQQQLRRKINSRERKRMQ 109

Query: 346 ELSLAV 363
           +L+LA+
Sbjct: 110 DLNLAM 115

>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p|
           Ib)
          Length = 308

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = +1

Query: 166 RGRISANQPQFLLPNPARR--RERGRNHSPRPPPAES--LAARPHVFIPRL 306
           R R+++ QP   LP P RR      R  SP PP A S   AA+    IP+L
Sbjct: 63  RQRLASRQPWPPLPTPLRRTSSRSSRPPSPSPPRASSPTSAAKAPGLIPKL 113

>IER2_RAT (Q6P7D3) Immediate early response gene 2 protein|
          Length = 221

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +1

Query: 172 RISANQPQFLLPNPARRRERGRNHSPRPPPAESLAARPHVFIP 300
           ++  +QP+F    P+RR    R H PR P A   AA P V  P
Sbjct: 51  KVETHQPEF---PPSRRALDPRLHPPREPEAAMEAATPDVEQP 90

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = +1

Query: 169  GRISANQPQFLLPN-PAR---RRERGRNHSPRPPPAESLAARPH-VFIPRLGRRCAERER 333
            G  +   P+  LP  PAR   R  RG   SP PPP   LA R H    PR G   +   R
Sbjct: 2342 GPRTGQAPRARLPQKPARSVQRERRGLVLSPPPPPPGELAPRAHPARTPRPGPGDSRSRR 2401

Query: 334  SG 339
             G
Sbjct: 2402 GG 2403

>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 367

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = +1

Query: 253 PPPAESLAA----RPHVFIPRLGRRCAERERSGGAELSLAVAQ 369
           PPP  SL A    +    +  + RRC   ER GG    LA AQ
Sbjct: 136 PPPGSSLRAVAVYKKSEHVAEVVRRCPHHERCGGGTDGLAPAQ 178

>RELN_HUMAN (P78509) Reelin precursor (EC 3.4.21.-)|
          Length = 3460

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 345 SPATPFPLRASPSQSRNKNVWA 280
           +PAT F LR    Q  N+NVWA
Sbjct: 533 TPATKFCLRQKNHQGHNRNVWA 554

>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 732

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 223 RERGRNHSPRPPPAESLAARPHVFIPRLGRRCAERERSGGAE 348
           +E      P   PA  L  RP   +P+L  R A ++R+G  E
Sbjct: 321 KEASLQEPPGKQPAAGLPGRPVSRVPQLKARVASKDRTGNDE 362

>HOXL_AZOVI (P40592) Hydrogenase expression/formation protein hoxL|
          Length = 106

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 134 GEEWSGEDGGAAWVT*QLLGHVNTGRWMLSFLDPASQ 24
           G    G++ G  W+  +L+     G W+L FLD A +
Sbjct: 15  GRALCGDENGVRWIDTRLVEPPAPGDWLLVFLDAARE 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,298,444
Number of Sequences: 219361
Number of extensions: 1200757
Number of successful extensions: 3671
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3653
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)