ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl19d06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY483152.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA2) mRNA, complete cds Length = 3907 Score = 607 bits (306), Expect = e-170 Identities = 312/314 (99%) Strand = Plus / Plus Query: 86 tcctccgagagagtctgagcgggatctggggcgcggggatctggtgggcgcgccatggag 145 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21 tccttcgagagagtctgagcgggatctggggcgcggggatctggtgggcgcgccatggag 80 Query: 146 gccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 gccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgc 140 Query: 206 gacgaggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccagatttgc 265 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gacggggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccagatttgc 200 Query: 266 ggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgagtgcgcc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 ggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgagtgcgcc 260 Query: 326 ttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaactgccca 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 ttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaactgccca 320 Query: 386 cagtgcaagaccag 399 |||||||||||||| Sbjct: 321 cagtgcaagaccag 334
>ref|XM_470347.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3905 Score = 281 bits (142), Expect = 8e-73 Identities = 229/258 (88%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 1 atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatc 60 Query: 200 cgccgcgacgaggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccag 259 |||||||||| |||||| ||| ||| |||| ||||||| ||| | || ||||||| Sbjct: 61 cgccgcgacggggagcccgggccgaagccggtgaagcatacgaatgggcaggtgtgccag 120 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| | || ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 121 atttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctgcaacgag 180 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaac 379 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 181 tgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcacgcagaac 240 Query: 380 tgcccacagtgcaagacc 397 ||||| |||||||||||| Sbjct: 241 tgcccccagtgcaagacc 258
>dbj|AK100877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C10, full insert sequence Length = 4029 Score = 281 bits (142), Expect = 8e-73 Identities = 229/258 (88%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 171 atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatc 230 Query: 200 cgccgcgacgaggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccag 259 |||||||||| |||||| ||| ||| |||| ||||||| ||| | || ||||||| Sbjct: 231 cgccgcgacggggagcccgggccgaagccggtgaagcatacgaatgggcaggtgtgccag 290 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| | || ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 291 atttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctgcaacgag 350 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaac 379 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 351 tgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcacgcagaac 410 Query: 380 tgcccacagtgcaagacc 397 ||||| |||||||||||| Sbjct: 411 tgcccccagtgcaagacc 428
>gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 258 bits (130), Expect = 1e-65 Identities = 226/258 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 186 atggaggccagcgccgggctggtcgccggctcgcacaaccggaacgagctcgtcgtcatc 245 Query: 200 cgccgcgacgaggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccag 259 |||||||| | ||||||||| ||| ||| || | |||| |||| || || ||||||| Sbjct: 246 cgccgcgatggcgagccagggccgaagcccatggaccagcggaacggccaggtgtgccag 305 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| |||||| | ||||| ||| || || ||||| |||||||||||| Sbjct: 306 atttgcggcgacgacgtggggcgcaaccccgacggggagccgttcgtggcctgcaacgag 365 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaac 379 |||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||| Sbjct: 366 tgcgccttccccatctgccgggactgctacgagtacgagcgccgcgagggcacgcagaac 425 Query: 380 tgcccacagtgcaagacc 397 ||||| |||||||||||| Sbjct: 426 tgcccccagtgcaagacc 443
>dbj|AK121193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086F23, full insert sequence Length = 4127 Score = 250 bits (126), Expect = 3e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 256 atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatc 315 Query: 200 cgccgcgacgaggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccag 259 |||||||||| || || ||| ||| |||||| |||||||||| | || ||||||| Sbjct: 316 cgccgcgacggcgatcccgggccgaagccgctccggcagcagaacgggcaggtgtgccag 375 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| |||||||| ||||| |||||| || ||||| || ||||||||| Sbjct: 376 atttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtgcaacgag 435 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaac 379 ||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 436 tgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaac 495 Query: 380 tgcccacagtgcaagacc 397 ||||| |||||||||||| Sbjct: 496 tgcccccagtgcaagacc 513
>dbj|AK120236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043M21, full insert sequence Length = 2931 Score = 250 bits (126), Expect = 3e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 258 atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatc 317 Query: 200 cgccgcgacgaggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccag 259 |||||||||| || || ||| ||| |||||| |||||||||| | || ||||||| Sbjct: 318 cgccgcgacggcgatcccgggccgaagccgctccggcagcagaacgggcaggtgtgccag 377 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| |||||||| ||||| |||||| || ||||| || ||||||||| Sbjct: 378 atttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtgcaacgag 437 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaac 379 ||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 438 tgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaac 497 Query: 380 tgcccacagtgcaagacc 397 ||||| |||||||||||| Sbjct: 498 tgcccccagtgcaagacc 515
>dbj|AK073561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042D15, full insert sequence Length = 4208 Score = 250 bits (126), Expect = 3e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 337 atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatc 396 Query: 200 cgccgcgacgaggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccag 259 |||||||||| || || ||| ||| |||||| |||||||||| | || ||||||| Sbjct: 397 cgccgcgacggcgatcccgggccgaagccgctccggcagcagaacgggcaggtgtgccag 456 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| |||||||| ||||| |||||| || ||||| || ||||||||| Sbjct: 457 atttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtgcaacgag 516 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaac 379 ||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 517 tgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaac 576 Query: 380 tgcccacagtgcaagacc 397 ||||| |||||||||||| Sbjct: 577 tgcccccagtgcaagacc 594
>gb|AF200531.1|AF200531 Zea mays cellulose synthase-7 (CesA-7) mRNA, complete cds Length = 3968 Score = 248 bits (125), Expect = 1e-62 Identities = 224/257 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 143 atggaggcgagcgccgggctggtggccggctcccacaaccgcaacgagctcgtcgtcatc 202 Query: 200 cgccgcgacgaggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccag 259 |||||||||| || || ||| ||| ||||| | | |||||||| | || ||||||| Sbjct: 203 cgccgcgacggcgatcccgggccgaagccgccgcgggagcagaacgggcaggtgtgccag 262 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| | || || | ||||||||| ||||||||||| || ||||||||| Sbjct: 263 atttgcggcgacgacgtcggccttgcccccggcggggaccccttcgtggcgtgcaacgag 322 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaac 379 |||||||||||||||||||| ||||||||||| |||||||| || |||||||| |||||| Sbjct: 323 tgcgccttccccgtctgccgggactgctacgaatacgagcgccgggagggcacgcagaac 382 Query: 380 tgcccacagtgcaagac 396 ||||| ||||||||||| Sbjct: 383 tgcccccagtgcaagac 399
>gb|AY103655.1| Zea mays PCO096398 mRNA sequence Length = 3897 Score = 248 bits (125), Expect = 1e-62 Identities = 224/257 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 156 atggaggcgagcgccgggctggtggccggctcccacaaccgcaacgagctcgtcgtcatc 215 Query: 200 cgccgcgacgaggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccag 259 |||||||||| || || ||| ||| ||||| | | |||||||| | || ||||||| Sbjct: 216 cgccgcgacggcgatcccgggccgaagccgccgcgggagcagaacgggcaggtgtgccag 275 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| | || || | ||||||||| ||||||||||| || ||||||||| Sbjct: 276 atttgcggcgacgacgtcggccttgcccccggcggggaccccttcgtggcgtgcaacgag 335 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaac 379 |||||||||||||||||||| ||||||||||| |||||||| || |||||||| |||||| Sbjct: 336 tgcgccttccccgtctgccgggactgctacgaatacgagcgccgggagggcacgcagaac 395 Query: 380 tgcccacagtgcaagac 396 ||||| ||||||||||| Sbjct: 396 tgcccccagtgcaagac 412
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 200 bits (101), Expect = 2e-48 Identities = 134/145 (92%) Strand = Plus / Plus Query: 253 gtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctg 312 ||||||||||||||| |||||| | || ||| ||||| |||||| |||||||||||||| Sbjct: 34874246 gtgccagatttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctg 34874305 Query: 313 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcac 372 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 34874306 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcac 34874365 Query: 373 ccagaactgcccacagtgcaagacc 397 ||||||||||| |||||||||||| Sbjct: 34874366 gcagaactgcccccagtgcaagacc 34874390 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 34874037 atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatc 34874096 Query: 200 cgccgcgacgaggagccagggg 221 |||||||||| |||||| |||| Sbjct: 34874097 cgccgcgacggggagcccgggg 34874118
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 200 bits (101), Expect = 2e-48 Identities = 134/145 (92%) Strand = Plus / Plus Query: 253 gtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctg 312 ||||||||||||||| |||||| | || ||| ||||| |||||| |||||||||||||| Sbjct: 34964318 gtgccagatttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctg 34964377 Query: 313 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcac 372 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 34964378 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcac 34964437 Query: 373 ccagaactgcccacagtgcaagacc 397 ||||||||||| |||||||||||| Sbjct: 34964438 gcagaactgcccccagtgcaagacc 34964462 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 34964109 atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatc 34964168 Query: 200 cgccgcgacgaggagccagggg 221 |||||||||| |||||| |||| Sbjct: 34964169 cgccgcgacggggagcccgggg 34964190
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 200 bits (101), Expect = 2e-48 Identities = 134/145 (92%) Strand = Plus / Minus Query: 253 gtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctg 312 ||||||||||||||| |||||| | || ||| ||||| |||||| |||||||||||||| Sbjct: 141234 gtgccagatttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctg 141175 Query: 313 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcac 372 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141174 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcac 141115 Query: 373 ccagaactgcccacagtgcaagacc 397 ||||||||||| |||||||||||| Sbjct: 141114 gcagaactgcccccagtgcaagacc 141090 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 141443 atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatc 141384 Query: 200 cgccgcgacgaggagccagggg 221 |||||||||| |||||| |||| Sbjct: 141383 cgccgcgacggggagcccgggg 141362
>gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 186 bits (94), Expect = 4e-44 Identities = 181/210 (86%) Strand = Plus / Plus Query: 188 ctcgtcgtcatccgccgcgacgaggagccaggggcgaggccgctgaagcagcagaaccgc 247 |||||||||||||||||||| | ||||||||| ||| ||| || | |||| |||| || Sbjct: 1 ctcgtcgtcatccgccgcgatggcgagccagggccgaagcccatggaccagcggaacggc 60 Query: 248 ggggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtc 307 || ||||||||||||||| |||||| |||||| | ||||| ||| || || ||||| Sbjct: 61 caggtgtgccagatttgcggcgacgacgtggggcgcaaccccgacggggagcctttcgtg 120 Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| Sbjct: 121 gcctgcaacgagtgcgccttccccatctgccgggactgctacgagtacgagcgccgcgag 180 Query: 368 ggcacccagaactgcccacagtgcaagacc 397 ||||| ||||||||||| |||||||||||| Sbjct: 181 ggcacgcagaactgcccccagtgcaagacc 210
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 176 bits (89), Expect = 4e-41 Identities = 131/145 (90%) Strand = Plus / Minus Query: 253 gtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctg 312 ||||||||||||||| |||||| |||||||| ||||| |||||| || ||||| || || Sbjct: 13693081 gtgccagatttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtg 13693022 Query: 313 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcac 372 |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 13693021 caacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcac 13692962 Query: 373 ccagaactgcccacagtgcaagacc 397 ||||||||||| |||||||||||| Sbjct: 13692961 gcagaactgcccccagtgcaagacc 13692937 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 250 ggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgc 309 |||||||||||| ||||| |||||| | ||| || |||| ||| || || ||||| || Sbjct: 8528627 ggcgtgccagatatgcggcgacgacgtcggggaagggcccgacggggagccgttcgtggc 8528686 Query: 310 ctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgaggg 369 |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 8528687 gtgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgccgcgaggg 8528746 Query: 370 cacccagaactgcccacagtgcaagacc 397 | | ||| ||||| |||||||||||| Sbjct: 8528747 ctcgcaggcttgcccccagtgcaagacc 8528774 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 13693291 atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatc 13693232 Query: 200 cgccgcgacg 209 |||||||||| Sbjct: 13693231 cgccgcgacg 13693222 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 8528508 atggaggcgagcgcggggctggtggcggggtcgcacaaccggaacgagct 8528557 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Minus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||| ||||||| ||| |||| |||||| || |||||| |||||||||||||||||| Sbjct: 5890104 ttcgccgcctgcgacgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 5890045 Query: 362 cgcgagggcacccagaactgcccacagtgcaagacca 398 || ||||||||| ||||| ||||||||||||| Sbjct: 5890044 aaggatggcacccaggcttgcccccagtgcaagacca 5890008
>dbj|AP004298.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409D09 Length = 150485 Score = 176 bits (89), Expect = 4e-41 Identities = 131/145 (90%) Strand = Plus / Minus Query: 253 gtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctg 312 ||||||||||||||| |||||| |||||||| ||||| |||||| || ||||| || || Sbjct: 44073 gtgccagatttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtg 44014 Query: 313 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcac 372 |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 44013 caacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcac 43954 Query: 373 ccagaactgcccacagtgcaagacc 397 ||||||||||| |||||||||||| Sbjct: 43953 gcagaactgcccccagtgcaagacc 43929 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 44283 atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatc 44224 Query: 200 cgccgcgacg 209 |||||||||| Sbjct: 44223 cgccgcgacg 44214
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| ||||||||||||||||||||||| |||||| || |||||| ||||||||| Sbjct: 15226908 cggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctacga 15226967 Query: 352 gtacgagcgacgcgagggcacccagaactgcccacagtgcaagacc 397 ||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 15226968 gtacgagcgccgcgagggcacccagaactgcccccagtgcaagacc 15227013 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 137 gccatggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 15226759 gccatggaggcgagcgccgggctggtggccgggtcgcacaaccggaacgagct 15226811
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| ||||||||||||||||||||||| |||||| || |||||| ||||||||| Sbjct: 120884 cggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctacga 120943 Query: 352 gtacgagcgacgcgagggcacccagaactgcccacagtgcaagacc 397 ||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 120944 gtacgagcgccgcgagggcacccagaactgcccccagtgcaagacc 120989 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 137 gccatggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 120735 gccatggaggcgagcgccgggctggtggccgggtcgcacaaccggaacgagct 120787
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| ||||||||||||||||||||||| |||||| || |||||| ||||||||| Sbjct: 6097 cggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctacga 6156 Query: 352 gtacgagcgacgcgagggcacccagaactgcccacagtgcaagacc 397 ||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 6157 gtacgagcgccgcgagggcacccagaactgcccccagtgcaagacc 6202 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 137 gccatggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 5948 gccatggaggcgagcgccgggctggtggccgggtcgcacaaccggaacgagct 6000
>dbj|AK121170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081B08, full insert sequence Length = 3631 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| ||||||||||||||||||||||| |||||| || |||||| ||||||||| Sbjct: 242 cggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctacga 301 Query: 352 gtacgagcgacgcgagggcacccagaactgcccacagtgcaagacc 397 ||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 302 gtacgagcgccgcgagggcacccagaactgcccccagtgcaagacc 347 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 137 gccatggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 93 gccatggaggcgagcgccgggctggtggccgggtcgcacaaccggaacgagct 145
>gb|AY372246.1| Zea mays cellulose synthase catalytic subunit 12 (CesA12) mRNA, complete cds Length = 3443 Score = 129 bits (65), Expect = 7e-27 Identities = 95/105 (90%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| ||||||||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 238 cggcgacctcttcgtcgcctgcaacgagtgcggcttccccgtgtgccggccctgctacga 297 Query: 352 gtacgagcgacgcgagggcacccagaactgcccacagtgcaagac 396 ||||||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 298 gtacgagcgccgggagggcacgcagaactgcccccagtgcaagac 342 Score = 89.7 bits (45), Expect = 6e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 133 gcgcgccatggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 85 gcgcgcgatggaggccagcgccgggctggtggccggctcgcacaaccggaacgagct 141
>ref|XM_477282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3746 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 250 ggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgc 309 |||||||||||| ||||| |||||| | ||| || |||| ||| || || ||||| || Sbjct: 185 ggcgtgccagatatgcggcgacgacgtcggggaagggcccgacggggagccgttcgtggc 244 Query: 310 ctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgaggg 369 |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 245 gtgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgccgcgaggg 304 Query: 370 cacccagaactgcccacagtgcaagacc 397 | | ||| ||||| |||||||||||| Sbjct: 305 ctcgcaggcttgcccccagtgcaagacc 332 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 66 atggaggcgagcgcggggctggtggcggggtcgcacaaccggaacgagct 115
>gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 (CesA-8) mRNA, complete cds Length = 3812 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 299 cccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgag 358 |||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 379 cccttcgtggcgtgcaacgagtgcgccttccccgtctgccgcgcctgctacgagtacgag 438 Query: 359 cgacgcgagggc 370 || ||||||||| Sbjct: 439 cgccgcgagggc 450 Score = 89.7 bits (45), Expect = 6e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| |||||||||||||||||||||||||| ||||| |||||||| || || ||| Sbjct: 214 atggaggctagcgcggggctggtggccggctcgcataaccggaacgagctggtggtgatc 273 Query: 200 cgccgcgac 208 ||||||||| Sbjct: 274 cgccgcgac 282
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 250 ggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgc 309 |||||||||||| ||||| |||||| | ||| || |||| ||| || || ||||| || Sbjct: 61095 ggcgtgccagatatgcggcgacgacgtcggggaagggcccgacggggagccgttcgtggc 61154 Query: 310 ctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgaggg 369 |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 61155 gtgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgccgcgaggg 61214 Query: 370 cacccagaactgcccacagtgcaagacc 397 | | ||| ||||| |||||||||||| Sbjct: 61215 ctcgcaggcttgcccccagtgcaagacc 61242 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 60976 atggaggcgagcgcggggctggtggcggggtcgcacaaccggaacgagct 61025
>dbj|AK099735.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090G16, full insert sequence Length = 2064 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 250 ggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgc 309 |||||||||||| ||||| |||||| | ||| || |||| ||| || || ||||| || Sbjct: 185 ggcgtgccagatatgcggcgacgacgtcggggaagggcccgacggggagccgttcgtggc 244 Query: 310 ctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgaggg 369 |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 245 gtgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgccgcgaggg 304 Query: 370 cacccagaactgcccacagtgcaagacc 397 | | ||| ||||| |||||||||||| Sbjct: 305 ctcgcaggcttgcccccagtgcaagacc 332 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 66 atggaggcgagcgcggggctggtggcggggtcgcacaaccggaacgagct 115
>dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D04, full insert sequence Length = 3746 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 250 ggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgc 309 |||||||||||| ||||| |||||| | ||| || |||| ||| || || ||||| || Sbjct: 185 ggcgtgccagatatgcggcgacgacgtcggggaagggcccgacggggagccgttcgtggc 244 Query: 310 ctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgaggg 369 |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 245 gtgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgccgcgaggg 304 Query: 370 cacccagaactgcccacagtgcaagacc 397 | | ||| ||||| |||||||||||| Sbjct: 305 ctcgcaggcttgcccccagtgcaagacc 332 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 66 atggaggcgagcgcggggctggtggcggggtcgcacaaccggaacgagct 115
>gb|AY103701.1| Zea mays PCO120363 mRNA sequence Length = 3788 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 299 cccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgag 358 |||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 366 cccttcgtggcgtgcaacgagtgcgccttccccgtctgccgcgcctgctacgagtacgag 425 Query: 359 cgacgcgagggc 370 || ||||||||| Sbjct: 426 cgccgcgagggc 437 Score = 89.7 bits (45), Expect = 6e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| |||||||||||||||||||||||||| ||||| |||||||| || || ||| Sbjct: 201 atggaggctagcgcggggctggtggccggctcgcataaccggaacgagctggtggtgatc 260 Query: 200 cgccgcgac 208 ||||||||| Sbjct: 261 cgccgcgac 269
>gb|DQ014506.1| Eucalyptus grandis cellulose synthase 2 (CesA2) mRNA, complete cds Length = 3471 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||||||||||| ||||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 250 ttcgtcgcctgccacgagtgcggcttccccgtctgccgcccctgctacgtctacgagcgc 309 Query: 362 cgcgagggcacccagaactgcccacagtgcaa 393 |||| ||||||||| |||||| |||||||| Sbjct: 310 agcgacggcacccagtgctgcccccagtgcaa 341
>gb|AY483151.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA3) mRNA, partial cds Length = 3362 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||| | ||||| ||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 51 cggcgagctcttcgccgcctgcgacgtctgcgccttccccgtctgccggccctgctacga 110 Query: 352 gtacgagcgacgcgagggcacccagaactgcccacagtgcaagacca 398 ||||||||| |||||||||||| |||||| ||||||||||||| Sbjct: 111 gtacgagcgcaaggagggcacccaggcctgcccgcagtgcaagacca 157
>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 3745 Score = 79.8 bits (40), Expect = 6e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 305 gtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 375 gtcgcctgcaacgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 430 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 154 ggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgc 202 |||| |||| ||||| |||||||||||||||||| ||||| | |||||| Sbjct: 218 ggggatggtcgccgggtcgcacaaccgcaacgagttcgtcatgatccgc 266
>gb|AY372244.1| Zea mays cellulose synthase catalytic subunit 10 (CesA10) mRNA, complete cds Length = 3470 Score = 77.8 bits (39), Expect = 2e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 299 cccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgag 358 |||||||| || ||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 194 cccttcgtggcgtgcgccgagtgcggcttccccgtctgccggccctgctacgagtacgag 253 Query: 359 cgacgcgagggcacccagaactgcccacagtgcaa 393 || |||||||||| ||| |||||| |||||||| Sbjct: 254 cgcagcgagggcacgcagtgctgcccgcagtgcaa 288
>gb|DQ160224.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 4070 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 139 catggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcat 198 ||||||||||| |||||| ||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 160 catggaggccaatgcggggttggtggcgggctcgcacaaccgcaatgagctggttgtcat 219 Query: 199 ccg 201 ||| Sbjct: 220 ccg 222
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 132994 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 132942
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 21837 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 21785
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 4511370 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 4511318
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full insert sequence Length = 3768 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 413
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full insert sequence Length = 3897 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 413
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full insert sequence Length = 3801 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 413
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full insert sequence Length = 3732 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 413
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full insert sequence Length = 3764 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 413
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full insert sequence Length = 3802 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 413
>dbj|AK067850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123A09, full insert sequence Length = 1444 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 364 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 416
>gb|AF030052.1|AF030052 Oryza sativa subsp. japonica RSW1-like cellulose synthase catalytic subunit mRNA, partial cds Length = 1838 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 264 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 316
>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 154 ggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgcgacg 209 |||| ||||||| ||||||||||||||||||||| ||||| | ||||||| ||||| Sbjct: 197 ggggatggtggcgggctcgcacaaccgcaacgagttcgtcatgatccgccacgacg 252
>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 154 ggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgcgacg 209 |||| ||||||| ||||||||||||||||||||| ||||| | ||||||| ||||| Sbjct: 203 ggggatggtggcgggctcgcacaaccgcaacgagttcgtcatgatccgccacgacg 258 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| ||||| |||||||| ||||||||| ||||| ||||||||||| Sbjct: 363 gcctgcaatgagtgtgccttccctgtctgccgcccttgctatgagtacgagcg 415
>ref|NM_196933.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase (OSJNBa0006L06.10), mRNA Length = 3408 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccagaactgcccacagtgcaa 393 |||||||||||||||||| |||||||||||||| |||||| |||||||| Sbjct: 141 ctgctacgagtacgagcgcagcgagggcacccagtgctgcccccagtgcaa 191
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccagaactgcccacagtgcaa 393 |||||||||||||||||| |||||||||||||| |||||| |||||||| Sbjct: 91774 ctgctacgagtacgagcgcagcgagggcacccagtgctgcccccagtgcaa 91824
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccagaactgcccacagtgcaa 393 |||||||||||||||||| |||||||||||||| |||||| |||||||| Sbjct: 16747257 ctgctacgagtacgagcgcagcgagggcacccagtgctgcccccagtgcaa 16747307 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 atccgccgcgacgaggagcca 217 ||||||||||||||||||||| Sbjct: 14534191 atccgccgcgacgaggagcca 14534171
>gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA, complete cds Length = 3453 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 159 tggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgcgacg 209 ||||||| ||||||||||||||||||||| ||||| | ||||||| ||||| Sbjct: 193 tggtggcgggctcgcacaaccgcaacgagttcgtcatgatccgccacgacg 243 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 311 tgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 ||||| |||||||||||||| ||||||||| ||||| ||||||||||| Sbjct: 351 tgcaatgagtgcgccttcccggtctgccgcccttgctatgagtacgagcg 400
>dbj|AK072259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009D02, full insert sequence Length = 3426 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccagaactgcccacagtgcaa 393 |||||||||||||||||| |||||||||||||| |||||| |||||||| Sbjct: 174 ctgctacgagtacgagcgcagcgagggcacccagtgctgcccccagtgcaa 224
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccagaactgcccacagtgcaa 393 |||||||||||||||||| |||||||||||||| |||||| |||||||| Sbjct: 16756297 ctgctacgagtacgagcgcagcgagggcacccagtgctgcccccagtgcaa 16756347 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 atccgccgcgacgaggagcca 217 ||||||||||||||||||||| Sbjct: 14542433 atccgccgcgacgaggagcca 14542413
>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds Length = 3547 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| |||||||||||||| ||||||||| ||||| ||||||||||| Sbjct: 191 gcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtacgagcg 243 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 151 cgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgcgacg 209 ||||||| ||||||| ||||| | ||||||||||||| ||||| | ||||||| ||||| Sbjct: 28 cgcggggatggtggcgggctcacgcaaccgcaacgagttcgtcatgatccgccacgacg 86
>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 154 ggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgcgacg 209 |||| ||||||| ||||| ||||||||||||||| ||||| | ||||||| ||||| Sbjct: 193 ggggatggtggcaggctctcacaaccgcaacgagttcgtcatgatccgccacgacg 248 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| ||||| |||||||| ||||||||| ||||| ||||||||||| Sbjct: 353 gcctgcaatgagtgtgccttccctgtctgccgcccttgctatgagtacgagcg 405
>gb|AY483150.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA1) mRNA, complete cds Length = 3605 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 325 cttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaactgccc 384 |||||| ||||||||| |||||||||| ||||||| |||||||||||| ||||| Sbjct: 186 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 245 Query: 385 acagtgcaagacca 398 ||||||||||||| Sbjct: 246 ccagtgcaagacca 259
>gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, full insert mRNA sequence Length = 3626 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 325 cttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaactgccc 384 |||||| ||||||||| |||||||||| ||||||| |||||||||||| ||||| Sbjct: 185 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 244 Query: 385 acagtgcaagacca 398 ||||||||||||| Sbjct: 245 ccagtgcaagacca 258
>dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulose synthase, complete cds Length = 3681 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 325 cttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaactgccc 384 |||||| ||||||||| |||||||||| ||||||| |||||||||||| ||||| Sbjct: 211 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 270 Query: 385 acagtgcaagacca 398 ||||||||||||| Sbjct: 271 ccagtgcaagacca 284
>ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3954 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Plus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||| ||||||| ||| |||| |||||| || |||||| |||||||||||||||||| Sbjct: 539 ttcgccgcctgcgacgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 598 Query: 362 cgcgagggcacccagaactgcccacagtgcaagacca 398 || ||||||||| ||||| ||||||||||||| Sbjct: 599 aaggatggcacccaggcttgcccccagtgcaagacca 635
>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| |||| ||||||| ||| |||| ||||||||| |||||| |||||||| Sbjct: 343 cggcgacctcttcaccgcctgcgacgtctgcggcttccccgtgtgccgcccatgctacga 402 Query: 352 gtacgagcg 360 ||||||||| Sbjct: 403 gtacgagcg 411
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Minus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||| ||||||| ||| |||| |||||| || |||||| |||||||||||||||||| Sbjct: 32552 ttcgccgcctgcgacgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 32493 Query: 362 cgcgagggcacccagaactgcccacagtgcaagacca 398 || ||||||||| ||||| ||||||||||||| Sbjct: 32492 aaggatggcacccaggcttgcccccagtgcaagacca 32456
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1559_F09 Length = 87792 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Minus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||| ||||||| ||| |||| |||||| || |||||| |||||||||||||||||| Sbjct: 64778 ttcgccgcctgcgacgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 64719 Query: 362 cgcgagggcacccagaactgcccacagtgcaagacca 398 || ||||||||| ||||| ||||||||||||| Sbjct: 64718 aaggatggcacccaggcttgcccccagtgcaagacca 64682
>dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059I02, full insert sequence Length = 3954 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Plus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||| ||||||| ||| |||| |||||| || |||||| |||||||||||||||||| Sbjct: 539 ttcgccgcctgcgacgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 598 Query: 362 cgcgagggcacccagaactgcccacagtgcaagacca 398 || ||||||||| ||||| ||||||||||||| Sbjct: 599 aaggatggcacccaggcttgcccccagtgcaagacca 635
>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| |||| ||||||| ||| |||| ||||||||| |||||| |||||||| Sbjct: 343 cggcgacctcttcaccgcctgcgacgtctgcggcttccccgtgtgccgcccatgctacga 402 Query: 352 gtacgagcg 360 ||||||||| Sbjct: 403 gtacgagcg 411
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds Length = 3773 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttcccc 331 |||||||||||||||||||||||| Sbjct: 233 gcctgcaacgagtgcgccttcccc 256
>gb|DQ014507.1| Eucalyptus grandis cellulose synthase 3 (CesA3) mRNA, complete cds Length = 3452 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 164 gccggctcgcacaaccgcaacgagctcgtcgt 195 ||||| || ||||||||||||||||||||||| Sbjct: 58 gccggttctcacaaccgcaacgagctcgtcgt 89
>gb|DQ160225.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA7) mRNA, complete cds Length = 4016 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Plus Query: 155 gggctggtggccggctcgcacaaccgcaacgagct 189 |||||| |||| |||||||||||||| |||||||| Sbjct: 149 gggctgctggcgggctcgcacaaccggaacgagct 183
>dbj|AP004509.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16K17, TM0037a, complete sequence Length = 84322 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Minus Query: 373 ccagaactgcccacagtgcaagaccag 399 ||||||||| ||||||||||||||||| Sbjct: 49237 ccagaactgtccacagtgcaagaccag 49211
>gb|DQ020209.1| Bambusa oldhamii cellulose synthase BoCesA2 mRNA, complete cds Length = 3648 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 gtcgcctgcaacgagtgcgccttccc 330 ||||||||||||||||| |||||||| Sbjct: 266 gtcgcctgcaacgagtgtgccttccc 291
>gb|AE004327.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 235 of 251 of the complete chromosome Length = 16140 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aactgcccacagtgcaagacc 397 ||||||||||||||||||||| Sbjct: 9797 aactgcccacagtgcaagacc 9777
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds Length = 3277 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 158 ctggtggccggctcgcacaaccgcaacgagctcgtcgtcat 198 ||||| || ||||| ||||||||||||||||| || ||||| Sbjct: 39 ctggtcgcaggctctcacaaccgcaacgagcttgttgtcat 79
>gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0072A12, complete sequence Length = 149347 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 atccgccgcgacgaggagcca 217 ||||||||||||||||||||| Sbjct: 6654 atccgccgcgacgaggagcca 6634
>gb|AC025906.2|AC025906 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0075H14, complete sequence Length = 155420 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 atccgccgcgacgaggagcca 217 ||||||||||||||||||||| Sbjct: 148554 atccgccgcgacgaggagcca 148534
>gb|DQ014510.1| Eucalyptus grandis cellulose synthase 6 (CesA6) mRNA, complete cds Length = 3782 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 167 ggctcgcacaaccgcaacgagctcgtcgtcatccgccgcga 207 ||||| |||||| | |||||||| || |||||||||||||| Sbjct: 75 ggctctcacaacaggaacgagctggttgtcatccgccgcga 115
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 ccggcggcgaccccttcgtcg 308 ||||||||||||||||||||| Sbjct: 3373763 ccggcggcgaccccttcgtcg 3373783
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 gcgcggggctggtggccggct 170 ||||||||||||||||||||| Sbjct: 336302 gcgcggggctggtggccggct 336322
>dbj|AB081806.1| Streptomyces griseus chi II gene for chitinase II, partial cds Length = 2299 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 282 tcggccccggcggcgaccccttcgt 306 |||||||||||||||||||| |||| Sbjct: 764 tcggccccggcggcgaccccgtcgt 788
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggccagcgcggggctggtggccgg 168 |||| ||||||||||||||||||| Sbjct: 138025 ggccggcgcggggctggtggccgg 138048
>gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosome 10, complete sequence Length = 166313 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 agccaggggcgaggccgctgaagcagca 240 |||||||||| |||| |||||||||||| Sbjct: 52514 agccaggggcaaggcagctgaagcagca 52541
>ref|XM_468275.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2598 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cggccccggcggcgacccct 302 |||||||||||||||||||| Sbjct: 156 cggccccggcggcgacccct 175
>ref|XM_517018.1| PREDICTED: Pan troglodytes aminomethyltransferase (glycine cleavage system protein T) (LOC461012), mRNA Length = 2169 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 850 tcgtcgcctgcaacgagtgc 831
>ref|NM_000481.2| Homo sapiens aminomethyltransferase (glycine cleavage system protein T) (AMT), mRNA Length = 2117 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 130 tcgtcgcctgcaacgagtgc 111
>gb|L21196.1|RERCOBLMK Rhodococcus erythropolis CobL (cobL), S-adenosylmethionine-dependent methylase (cobM), and precorrin-6x reductase (cobK) genes, complete cds; and unknown genes Length = 5753 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 tggggctcggccccggcggc 295 |||||||||||||||||||| Sbjct: 1105 tggggctcggccccggcggc 1124
>gb|AY221087.1| Solanum tuberosum cellulose synthase (StCesA3) mRNA, complete cds Length = 3997 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tgcccacagtgcaagaccag 399 |||||||||||||||||||| Sbjct: 515 tgcccacagtgcaagaccag 534
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 gctggtggccggctcgcacaaccg 180 |||||||||||||||||| ||||| Sbjct: 33251 gctggtggccggctcgcagaaccg 33228
>gb|AY222078.1| Columnea latent viroid isolate PSTVd*/CLVd, complete genome Length = 359 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gggcgaggccgctgaagcag 238 |||||||||||||||||||| Sbjct: 228 gggcgaggccgctgaagcag 209
>gb|AY222077.1| Columnea latent viroid isolate PSTVd/CLVd, complete genome Length = 359 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gggcgaggccgctgaagcag 238 |||||||||||||||||||| Sbjct: 228 gggcgaggccgctgaagcag 209
>gb|AY222076.1| Columnea latent viroid isolate CLVd(Path-CCR), complete genome Length = 363 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gggcgaggccgctgaagcag 238 |||||||||||||||||||| Sbjct: 230 gggcgaggccgctgaagcag 211
>gb|AY222075.1| Columnea latent viroid isolate CLVd(TLeft-Path*), complete genome Length = 367 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gggcgaggccgctgaagcag 238 |||||||||||||||||||| Sbjct: 233 gggcgaggccgctgaagcag 214
>gb|AY222074.1| Columnea latent viroid isolate CLVd(TLeft-Path), complete genome Length = 367 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gggcgaggccgctgaagcag 238 |||||||||||||||||||| Sbjct: 233 gggcgaggccgctgaagcag 214
>gb|AY222073.1| Columnea latent viroid isolate CLVd(TLeft), complete genome Length = 371 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gggcgaggccgctgaagcag 238 |||||||||||||||||||| Sbjct: 235 gggcgaggccgctgaagcag 216
>gb|AY222072.1| Columnea latent viroid isolate CLVd(WildType), complete genome Length = 371 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gggcgaggccgctgaagcag 238 |||||||||||||||||||| Sbjct: 235 gggcgaggccgctgaagcag 216
>ref|NM_032316.3| Homo sapiens nicolin 1 (NICN1), mRNA Length = 3227 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 3110 tcgtcgcctgcaacgagtgc 3091
>gb|AC104452.2| Homo sapiens chromosome 3 clone RP11-949J7, complete sequence Length = 186563 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 145008 tcgtcgcctgcaacgagtgc 144989
>dbj|AK096062.1| Homo sapiens cDNA FLJ38743 fis, clone KIDNE2012025, highly similar to AMINOMETHYLTRANSFERASE PRECURSOR (EC 2.1.2.10) Length = 2038 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 80 tcgtcgcctgcaacgagtgc 61
>gb|AF449714.1|AF449714 Cercopithecine herpesvirus 2 unique short region, partial sequence Length = 9811 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggccagcgcggggctggtggccgg 168 |||| ||||||||||||||||||| Sbjct: 4976 ggccggcgcggggctggtggccgg 4999
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cggccccggcggcgacccct 302 |||||||||||||||||||| Sbjct: 33958846 cggccccggcggcgacccct 33958827
>gb|DQ020213.1| Bambusa oldhamii cellulose synthase BoCesA5 mRNA, complete cds Length = 3613 Score = 40.1 bits (20), Expect = 5.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccagaactgcccacagtgcaagacca 398 |||||||||||||||||| || ||||||||| ||||| ||||||||||||| Sbjct: 355 ctgctacgagtacgagcgcaaggacggcacccaggcgtgcccgcagtgcaagacca 410
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 40.1 bits (20), Expect = 5.3 Identities = 50/60 (83%) Strand = Plus / Plus Query: 301 cttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 ||||| ||||||| ||| |||| |||||| || ||||| |||||||||||||||||| Sbjct: 54 cttcgccgcctgcgacgtctgcggcttcccggtgtgccggccctgctacgagtacgagcg 113
>gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA, complete cds Length = 3756 Score = 40.1 bits (20), Expect = 5.3 Identities = 50/60 (83%) Strand = Plus / Plus Query: 301 cttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 ||||| ||||||| ||| |||| |||||| || ||||| |||||||||||||||||| Sbjct: 398 cttcgccgcctgcgacgtctgcggcttcccggtgtgccggccctgctacgagtacgagcg 457
>dbj|D14686.2| Homo sapiens AMT gene for glycine cleavage system T-protein, complete cds Length = 5129 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 731 tcgtcgcctgcaacgagtgc 712
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggctcggccccggcggcgac 298 |||||||||||||||||||| Sbjct: 6260905 ggctcggccccggcggcgac 6260924
>gb|AE005123.1| Halobacterium sp. NRC-1 section 154 of 170 of the complete genome Length = 11202 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cggccccggcggcgacccct 302 |||||||||||||||||||| Sbjct: 441 cggccccggcggcgacccct 460
>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_E04 Length = 133621 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cggccccggcggcgacccct 302 |||||||||||||||||||| Sbjct: 117809 cggccccggcggcgacccct 117790
>emb|X15663.1|CLVRNA Columnea latent viroid RNA Length = 370 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gggcgaggccgctgaagcag 238 |||||||||||||||||||| Sbjct: 234 gggcgaggccgctgaagcag 215
>dbj|AK073980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076G02, full insert sequence Length = 2597 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cggccccggcggcgacccct 302 |||||||||||||||||||| Sbjct: 155 cggccccggcggcgacccct 174
>dbj|D13811.1|HUMGCSTP Homo sapiens mRNA for glycine cleavage system T-protein, complete cds Length = 2102 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 130 tcgtcgcctgcaacgagtgc 111
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 cctggggctcggccccggcg 293 |||||||||||||||||||| Sbjct: 1742506 cctggggctcggccccggcg 1742487
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cagcgcggggctggtggccg 167 |||||||||||||||||||| Sbjct: 579806 cagcgcggggctggtggccg 579825
>gb|M93686.1|CLEAAA Columnea latent viroid mRNA Length = 372 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gggcgaggccgctgaagcag 238 |||||||||||||||||||| Sbjct: 233 gggcgaggccgctgaagcag 214 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,018,341 Number of Sequences: 3902068 Number of extensions: 2018341 Number of successful extensions: 40334 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 39543 Number of HSP's gapped (non-prelim): 778 length of query: 399 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 377 effective length of database: 17,147,199,772 effective search space: 6464494314044 effective search space used: 6464494314044 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
