Clone Information

BLAST Search Result

Clone Name	bastl19d03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related pr...	92	4e-19
2	DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related pr...	91	1e-18
3	MSP1_SCHPO (P87320) Protein msp1, mitochondrial precursor	43	3e-04
4	MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Conta...	41	0.001
5	DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-...	37	0.019
6	DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynami...	37	0.019
7	DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynami...	37	0.025
8	DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like pr...	36	0.042
9	DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)	35	0.072
10	DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like pr...	34	0.12
11	DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like pr...	34	0.12
12	DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like pr...	34	0.16
13	DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like pr...	34	0.16
14	DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like pr...	33	0.21
15	DNM1_YEAST (P54861) Dynamin-related protein DNM1 (EC 3.6.5.5)	33	0.27
16	DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like pr...	33	0.27
17	VPS1_YEAST (P21576) Vacuolar sorting protein 1	33	0.36
18	YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08	32	0.61
19	CEA_CITFR (P04480) Colicin-A	32	0.61
20	DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)	31	1.4
21	DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain)...	31	1.4
22	DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)	31	1.4
23	DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (...	31	1.4
24	DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular)...	31	1.4
25	DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)	31	1.4
26	DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)	31	1.4
27	DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)	31	1.4
28	VPS1_SCHPO (Q9URZ5) Vacuolar sorting protein 1	30	1.8
29	DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)	30	1.8
30	DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)	30	1.8
31	ENGC_CLOTE (Q895P5) Probable GTPase engC (EC 3.6.1.-)	30	2.3
32	ENGC_LEPIN (Q8EZ61) Probable GTPase engC (EC 3.6.1.-)	30	3.0
33	ENGC_LEPIC (Q72MK0) Probable GTPase engC (EC 3.6.1.-)	30	3.0
34	RPOA2_SULSO (P58192) DNA-directed RNA polymerase subunit A'' (EC...	29	3.9
35	GIMA5_HUMAN (Q96F15) GTPase, IMAP family member 5 (Immunity-asso...	29	5.2
36	GIMA4_MOUSE (Q99JY3) GTPase, IMAP family member 4 (Immunity-asso...	29	5.2
37	GIMA4_HUMAN (Q9NUV9) GTPase, IMAP family member 4 (Immunity-asso...	29	5.2
38	MDR_LEITA (P21441) Multidrug resistance protein (EC 3.6.3.44) (P...	29	5.2
39	MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 ...	28	6.7
40	MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (E...	28	6.7
41	AF9_USTMA (Q4PFI5) Protein AF-9 homolog	28	6.7
42	ENGC2_LISIN (Q92C22) Probable GTPase engC 2 (EC 3.6.1.-)	28	8.8
43	MFN1_RAT (Q8R4Z9) Transmembrane GTPase MFN1 (EC 3.6.5.-) (Mitofu...	28	8.8
44	MFN1_MOUSE (Q811U4) Transmembrane GTPase MFN1 (EC 3.6.5.-) (Mito...	28	8.8
45	MFN1_HUMAN (Q8IWA4) Transmembrane GTPase MFN1 (EC 3.6.5.-) (Mito...	28	8.8
46	ENGC1_LACPL (Q88WK9) Probable GTPase engC protein 1 (EC 3.6.1.-)	28	8.8
47	ENGA_RHILO (Q986D9) GTP-binding protein engA	28	8.8
48	YOR6_CALSR (P40983) Hypothetical protein in xynA 3'region (ORF6)...	28	8.8
49	MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (E...	28	8.8

>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 48/76 (63%), Positives = 53/76 (69%)
 Frame = +2

Query: 188 MDAIVELVELSESMRQXXXXXXXXXXXXXXXXXXXXTFLNAVALGNVGSGKSAVLNSLIG 367
           M+AI EL +LS+SM+Q                    TFLN VALGNVG+GKSAVLNSLIG
Sbjct: 1   MEAIDELSQLSDSMKQAASLLADEDPDETSSSKRPATFLNVVALGNVGAGKSAVLNSLIG 60

Query: 368 HPVLPTGENGATRAPI 415
           HPVLPTGENGATRAPI
Sbjct: 61  HPVLPTGENGATRAPI 76

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>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
           (Dynamin-like protein 3)
          Length = 920

 Score = 90.5 bits (223), Expect = 1e-18
 Identities = 48/76 (63%), Positives = 52/76 (68%)
 Frame = +2

Query: 188 MDAIVELVELSESMRQXXXXXXXXXXXXXXXXXXXXTFLNAVALGNVGSGKSAVLNSLIG 367
           M+AI EL +LS+SMRQ                    T LN VALGNVG+GKSAVLNSLIG
Sbjct: 1   MEAIDELSQLSDSMRQAASLLADEDPDETSSSRRPATSLNVVALGNVGAGKSAVLNSLIG 60

Query: 368 HPVLPTGENGATRAPI 415
           HPVLPTGENGATRAPI
Sbjct: 61  HPVLPTGENGATRAPI 76

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>MSP1_SCHPO (P87320) Protein msp1, mitochondrial precursor|
          Length = 903

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 19/41 (46%), Positives = 27/41 (65%)
 Frame = +2

Query: 296 TFLNAVALGNVGSGKSAVLNSLIGHPVLPTGENGATRAPID 418
           T  + V +G+  SGKS+VL +++GH  LP G N  TR PI+
Sbjct: 262 TLPSIVVIGSQSSGKSSVLEAIVGHEFLPKGSNMVTRRPIE 302

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>MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Contains: Protein|
           MGM1 isoform 1; Protein MGM1 isoform 2]
          Length = 881

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 19/41 (46%), Positives = 26/41 (63%)
 Frame = +2

Query: 296 TFLNAVALGNVGSGKSAVLNSLIGHPVLPTGENGATRAPID 418
           T  + V +G+  SGKS+VL S++G   LP G N  TR PI+
Sbjct: 209 TLPSIVVIGSQSSGKSSVLESIVGREFLPKGSNMVTRRPIE 249

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>DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)|
          Length = 755

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 311 VALGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           V +G   SGKS+VL SL+G  +LP G    TR P+
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPL 63

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>DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-related|
           protein 1) (Dynamin family member proline-rich
           carboxyl-terminal domain less) (Dymple)
          Length = 742

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 311 VALGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           V +G   SGKS+VL SL+G  +LP G    TR P+
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPL 63

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>DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)|
           (Dnm1p/Vps1p-like protein) (DVLP) (Dynamin family member
           proline-rich carboxyl-terminal domain less) (Dymple)
           (Dynamin-related protein 1) (Dynamin-like protein 4)
           (Dynamin-li
          Length = 736

 Score = 36.6 bits (83), Expect = 0.025
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 311 VALGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           V +G   SGKS+VL SL+G  +LP G    TR P+
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPL 63

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>DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like protein 2)|
           (Dynamin-like protein 2a)
          Length = 808

 Score = 35.8 bits (81), Expect = 0.042
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +2

Query: 311 VALGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           V +G+  SGKS+VL +L+G   LP G +  TR P+
Sbjct: 63  VVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPL 97

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>DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)|
          Length = 691

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   SGKS+VL SL+G  +LP G    TR P+
Sbjct: 31  VGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPL 63

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>DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like protein 2b)|
          Length = 780

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G+  SGKS+VL +L+G   LP G +  TR P+
Sbjct: 49  VGSQSSGKSSVLEALVGRDFLPRGNDICTRRPL 81

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>DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like protein D)|
           (Dynamin-like protein DLP3)
          Length = 612

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 305 NAVALGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +   +G   SGKS+VL S++G   LP G    TR P+
Sbjct: 37  SVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPL 73

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>DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like protein A)|
           (Dynamin-like protein 1)
          Length = 610

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 302 LNAVAL-GNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           L A+A+ G   SGKS+VL S++G   LP G    TR P+
Sbjct: 34  LPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPL 72

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>DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like protein E)|
           (Dynamin-like protein 4) (Dynamin-like protein DLP2)
          Length = 624

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   SGKS+VL S++G   LP G    TR P+
Sbjct: 46  VGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPL 78

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>DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like protein C)|
           (Dynamin-like protein 5) (Dynamin-like protein DLP1)
          Length = 614

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   SGKS+VL S++G   LP G    TR P+
Sbjct: 41  VGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPL 73

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>DNM1_YEAST (P54861) Dynamin-related protein DNM1 (EC 3.6.5.5)|
          Length = 757

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G+  SGKS++L +L+G   LP G    TR P+
Sbjct: 34  VGSQSSGKSSILETLVGRDFLPRGTGIVTRRPL 66

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>DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like protein B)|
          Length = 610

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 302 LNAVAL-GNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           L A+A+ G   SGKS+VL S++G   LP G    TR P+
Sbjct: 34  LPAIAVVGGQSSGKSSVLESVVGKDFLPRGAGIVTRRPL 72

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>VPS1_YEAST (P21576) Vacuolar sorting protein 1|
          Length = 704

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G+  SGKS+VL +++G   LP G    TR P+
Sbjct: 35  VGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPL 67

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>YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08|
          Length = 781

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 311 VALGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           V +G+   GKS+VL +++G   LP G    TR P+
Sbjct: 30  VVVGSQSCGKSSVLENIVGKDFLPRGTGIVTRRPL 64

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>CEA_CITFR (P04480) Colicin-A|
          Length = 592

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +2

Query: 329 GSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           G G + VLNSL+ +PV P G+NG  ++P+
Sbjct: 91  GRGFTRVLNSLVNNPVSPAGQNGG-KSPV 118

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>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)|
          Length = 864

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   +GKS+VL + +G   LP G    TR P+
Sbjct: 37  VGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPL 69

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>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)|
          Length = 851

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   +GKS+VL + +G   LP G    TR P+
Sbjct: 37  VGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPL 69

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>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)|
          Length = 867

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   +GKS+VL + +G   LP G    TR P+
Sbjct: 37  VGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPL 69

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>DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 848

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   +GKS+VL + +G   LP G    TR P+
Sbjct: 37  VGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPL 69

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>DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 859

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   +GKS+VL + +G   LP G    TR P+
Sbjct: 37  VGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPL 69

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>DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   +GKS+VL + +G   LP G    TR P+
Sbjct: 37  VGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPL 69

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>DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)|
          Length = 870

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   +GKS+VL + +G   LP G    TR P+
Sbjct: 37  VGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPL 69

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>DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   +GKS+VL + +G   LP G    TR P+
Sbjct: 37  VGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPL 69

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>VPS1_SCHPO (Q9URZ5) Vacuolar sorting protein 1|
          Length = 678

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 332 SGKSAVLNSLIGHPVLPTGENGATRAPI 415
           SGKS+VL +++G   LP G    TR P+
Sbjct: 38  SGKSSVLENIVGRDFLPRGTGIVTRRPL 65

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>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)|
          Length = 877

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   +GKS+VL + +G   LP G    TR P+
Sbjct: 32  VGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPL 64

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>DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)|
          Length = 830

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGENGATRAPI 415
           +G   +GKS+VL + +G   LP G    TR P+
Sbjct: 39  VGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPL 71

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>ENGC_CLOTE (Q895P5) Probable GTPase engC (EC 3.6.1.-)|
          Length = 290

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 311 VALGNVGSGKSAVLNSLIGHPVLPTGE 391
           V  G  G+GKS ++N L+G  V+ TG+
Sbjct: 159 VLCGPSGAGKSTIINKLVGKDVMETGQ 185

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>ENGC_LEPIN (Q8EZ61) Probable GTPase engC (EC 3.6.1.-)|
          Length = 359

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGE 391
           LG+ G+GKS ++NSL+G  +  T E
Sbjct: 200 LGSSGAGKSTIINSLLGGEIQKTNE 224

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>ENGC_LEPIC (Q72MK0) Probable GTPase engC (EC 3.6.1.-)|
          Length = 359

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIGHPVLPTGE 391
           LG+ G+GKS ++NSL+G  +  T E
Sbjct: 200 LGSSGAGKSTIINSLLGGEIQKTNE 224

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>RPOA2_SULSO (P58192) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)|
          Length = 392

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 302 LNAVALGNVGSGKSAVLNSLIGHPV-LPTGENGATRAPI 415
           L+A A G+V   K  V N +IGHP+ L TG    T  PI
Sbjct: 352 LDAAARGDVEEFKGVVENIIIGHPIKLGTGMVELTMRPI 390

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>GIMA5_HUMAN (Q96F15) GTPase, IMAP family member 5 (Immunity-associated|
           nucleotide 4-like 1 protein) (Immunity-associated
           protein 3) (IAN-5)
          Length = 307

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 302 LNAVALGNVGSGKSAVLNSLIGHPV 376
           L  + +G  G GKSA  NS++G PV
Sbjct: 28  LRIILVGKTGCGKSATGNSILGQPV 52

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>GIMA4_MOUSE (Q99JY3) GTPase, IMAP family member 4 (Immunity-associated protein|
           4) (Immunity-associated nucleotide 1 protein)
          Length = 219

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 302 LNAVALGNVGSGKSAVLNSLIGHPVLPTG 388
           L  V LG  G+GKS+  NS++G  V  +G
Sbjct: 31  LRIVLLGKTGAGKSSTGNSILGEKVFNSG 59

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>GIMA4_HUMAN (Q9NUV9) GTPase, IMAP family member 4 (Immunity-associated protein|
           4) (Immunity-associated nucleotide 1 protein) (hIAN1)
          Length = 329

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 302 LNAVALGNVGSGKSAVLNSLIGHPVLPTG 388
           L  V +G  G+GKSA  NS++G  V  +G
Sbjct: 31  LRIVLVGKTGAGKSATGNSILGRKVFHSG 59

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>MDR_LEITA (P21441) Multidrug resistance protein (EC 3.6.3.44)|
           (P-glycoprotein)
          Length = 1548

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +2

Query: 311 VALGNVGSGKSAVLNSLIGHPVLPTGENGATRA 409
           + +G+ GSGKS +L +L+G   + +GE  A R+
Sbjct: 664 MVIGSTGSGKSTLLGALMGEYSVESGELWAERS 696

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>MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 11)
           (ATP-energized glutathione S-conjugate pump 11)
          Length = 1194

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/17 (64%), Positives = 16/17 (94%)
 Frame = +2

Query: 317 LGNVGSGKSAVLNSLIG 367
           +G VGSGK+++LNSL+G
Sbjct: 385 IGEVGSGKTSLLNSLLG 401

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>MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 8)
           (ATP-energized glutathione S-conjugate pump 8)
          Length = 1466

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 302 LNAVALGNVGSGKSAVLNSLIG 367
           +N    G VGSGKS++L+S++G
Sbjct: 630 MNVAICGTVGSGKSSLLSSILG 651

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>AF9_USTMA (Q4PFI5) Protein AF-9 homolog|
          Length = 431

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 25  PVPIPGAPLHSPGGFQFPGVRLQ 93
           P PIP  PLH+P G+ F  + L+
Sbjct: 346 PPPIPPHPLHTPTGYLFDALSLE 368

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>ENGC2_LISIN (Q92C22) Probable GTPase engC 2 (EC 3.6.1.-)|
          Length = 346

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 311 VALGNVGSGKSAVLNSLIGHPVLPTGE 391
           V LG+ G GKS+ +NSL G  ++ T E
Sbjct: 187 VLLGSSGVGKSSFINSLAGADLMKTSE 213

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>MFN1_RAT (Q8R4Z9) Transmembrane GTPase MFN1 (EC 3.6.5.-) (Mitofusin-1)|
           (Mitochondrial transmembrane GTPase FZO1B)
          Length = 741

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 320 GNVGSGKSAVLNSLIGHPVLPTG 388
           G   SGKS+V+N+++   VLP+G
Sbjct: 82  GRTSSGKSSVINAMLWDKVLPSG 104

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>MFN1_MOUSE (Q811U4) Transmembrane GTPase MFN1 (EC 3.6.5.-) (Mitofusin-1)|
          Length = 741

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 320 GNVGSGKSAVLNSLIGHPVLPTG 388
           G   SGKS+V+N+++   VLP+G
Sbjct: 82  GRTSSGKSSVINAMLWDKVLPSG 104

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>MFN1_HUMAN (Q8IWA4) Transmembrane GTPase MFN1 (EC 3.6.5.-) (Mitofusin-1) (Fzo|
           homolog)
          Length = 741

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 320 GNVGSGKSAVLNSLIGHPVLPTG 388
           G   SGKS+V+N+++   VLP+G
Sbjct: 82  GRTSSGKSSVINAMLWDKVLPSG 104

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>ENGC1_LACPL (Q88WK9) Probable GTPase engC protein 1 (EC 3.6.1.-)|
          Length = 298

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 308 AVALGNVGSGKSAVLNSLIGHPVLPTGE 391
           AV +G  G+GKS +LN L     L TGE
Sbjct: 163 AVVMGQTGAGKSTLLNHLQPGLALATGE 190

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>ENGA_RHILO (Q986D9) GTP-binding protein engA|
          Length = 479

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 302 LNAVALGNVGSGKSAVLNSLIGHPVLPTG-ENGATRAPI 415
           +    +G   +GKS ++N+LIG   L TG E G TR  I
Sbjct: 208 MRIAVVGRPNAGKSTLINALIGEERLLTGPEAGITRDSI 246

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>YOR6_CALSR (P40983) Hypothetical protein in xynA 3'region (ORF6) (Fragment)|
          Length = 402

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 311 VALGNVGSGKSAVLNSLIGHPVLPTG 388
           V LG    GKS ++N ++G  +LPTG
Sbjct: 51  VVLGQFKRGKSTLINYMLGANLLPTG 76

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>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 7)
           (ATP-energized glutathione S-conjugate pump 7)
          Length = 1493

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 302 LNAVALGNVGSGKSAVLNSLIG 367
           +N    G VGSGKS++L+S++G
Sbjct: 653 MNIAICGTVGSGKSSLLSSILG 674


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,104,772
Number of Sequences: 219361
Number of extensions: 372156
Number of successful extensions: 2386
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2385
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result