ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl19d01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016431.1| Zea mays clone Contig264 mRNA sequence Length = 866 Score = 531 bits (268), Expect = e-148 Identities = 367/400 (91%) Strand = Plus / Plus Query: 58 ccagcaatggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaagg 117 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 73 ccagccatggtgcacgtcaacttctaccgcaactatggtaagacgttcaagaaaccaagg 132 Query: 118 cgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactg 177 ||||| ||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 133 cgtccttatgagaaggagcgtcttgatgctgaactgaagctggtcggtgagtatgggctg 192 Query: 178 aggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgca 237 ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 193 aggtgcaagcgtgagctttggagggtccagtatgcactgagcaggatccgtaatgctgca 252 Query: 238 aggcacttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctctt 297 |||||||||||||| || || |||||||| ||||| |||||||||||||||| || ||| Sbjct: 253 aggcacttgctcacccttgacgagaagaacccccgtcgtatctttgagggtgaggcgctt 312 Query: 298 cttcgtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtc 357 ||||| |||||||||||||||||||| ||||||||||| ||| ||||||||||||| || Sbjct: 313 cttcgccgcatgaaccgctatgggctgcttgctgagggtcagaacaagcttgattatgtt 372 Query: 358 cttgccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggct 417 |||||||| || |||||||||||||| |||||||| ||||| || ||||||||||||||| Sbjct: 373 cttgccctcaccgctgagaacttcctcgcaaggcggcttcaaacacttgtcttcaaggct 432 Query: 418 ggcatggcaaagtccatccaccatgcccgtgtcttgatca 457 |||||||| |||||||| |||||||| ||||||||||||| Sbjct: 433 ggcatggccaagtccattcaccatgctcgtgtcttgatca 472
>dbj|AK104761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H02, full insert sequence Length = 884 Score = 452 bits (228), Expect = e-124 Identities = 360/404 (89%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||| ||||||| ||||||||||||||||||||||||||||||||| ||| | || || Sbjct: 65 atggttcacgtcagcttctaccgcaactatggtaagacattcaagaagccacgtcgccct 124 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 125 tacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgc 184 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcac 243 ||||||||||| ||| | || |||||||| |||||| | |||||||| ||||||||| Sbjct: 185 aagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcat 244 Query: 244 ttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgt 303 |||||||||| |||||||||||||| ||||| ||||||||||||| || || ||||| Sbjct: 245 ctgctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttcgc 304 Query: 304 cgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgcc 363 ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 305 cgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgcc 364 Query: 364 ctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatg 423 || |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 365 ctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatg 424 Query: 424 gcaaagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 || ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 425 gccaagtccatccaccatgctcgtgtcctgatcaggcaacgcca 468
>dbj|AK104660.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D11, full insert sequence Length = 955 Score = 452 bits (228), Expect = e-124 Identities = 360/404 (89%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||| ||||||| ||||||||||||||||||||||||||||||||| ||| | || || Sbjct: 75 atggtccacgtcagcttctaccgcaactatggtaagacattcaagaagccacgtcgccct 134 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 135 tacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgc 194 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcac 243 ||||||||||| ||| | || |||||||| |||||| | |||||||| |||||||||| Sbjct: 195 aagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcac 254 Query: 244 ttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgt 303 |||||||||| |||||||||||||| ||||| ||||| ||||||| || || ||||| Sbjct: 255 ctgctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttcgc 314 Query: 304 cgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgcc 363 ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 315 cgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgcc 374 Query: 364 ctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatg 423 || |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 375 ctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatg 434 Query: 424 gcaaagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 || ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 435 gccaagtccatccaccatgctcgtgtcctgatcaggcaacgcca 478
>dbj|AK104265.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G01, full insert sequence Length = 884 Score = 452 bits (228), Expect = e-124 Identities = 360/404 (89%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||| ||||||| ||||||||||||||||||||||||||||||||| ||| | || || Sbjct: 65 atggttcacgtcagcttctaccgcaactatggtaagacattcaagaagccacgtcgccct 124 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 125 tacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgc 184 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcac 243 ||||||||||| ||| | || |||||||| |||||| | |||||||| ||||||||| Sbjct: 185 aagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcat 244 Query: 244 ttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgt 303 |||||||||| |||||||||||||| ||||| ||||||||||||| || || ||||| Sbjct: 245 ctgctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttcgc 304 Query: 304 cgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgcc 363 ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 305 cgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgcc 364 Query: 364 ctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatg 423 || |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 365 ctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatg 424 Query: 424 gcaaagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 || ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 425 gccaagtccatccaccatgctcgtgtcctgatcaggcaacgcca 468
>dbj|AK104111.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G08, full insert sequence Length = 970 Score = 452 bits (228), Expect = e-124 Identities = 360/404 (89%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||| ||||||| ||||||||||||||||||||||||||||||||| ||| | || || Sbjct: 68 atggttcacgtcagcttctaccgcaactatggtaagacattcaagaagccacgtcgccct 127 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 128 tacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgc 187 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcac 243 ||||||||||| ||| | || |||||||| |||||| | |||||||| ||||||||| Sbjct: 188 aagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcat 247 Query: 244 ttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgt 303 |||||||||| |||||||||||||| ||||| ||||||||||||| || || ||||| Sbjct: 248 ctgctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttcgc 307 Query: 304 cgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgcc 363 ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 308 cgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgcc 367 Query: 364 ctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatg 423 || |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 368 ctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatg 427 Query: 424 gcaaagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 || ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 428 gccaagtccatccaccatgctcgtgtcctgatcaggcaacgcca 471
>dbj|AK072671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134P20, full insert sequence Length = 964 Score = 452 bits (228), Expect = e-124 Identities = 360/404 (89%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||| ||||||| ||||||||||||||||||||||||||||||||| ||| | || || Sbjct: 64 atggtccacgtcagcttctaccgcaactatggtaagacattcaagaagccacgtcgccct 123 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 124 tacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgc 183 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcac 243 ||||||||||| ||| | || |||||||| |||||| | |||||||| |||||||||| Sbjct: 184 aagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcac 243 Query: 244 ttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgt 303 |||||||||| |||||||||||||| ||||| ||||| ||||||| || || ||||| Sbjct: 244 ctgctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttcgc 303 Query: 304 cgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgcc 363 ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 304 cgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgcc 363 Query: 364 ctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatg 423 || |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 364 ctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatg 423 Query: 424 gcaaagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 || ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 424 gccaagtccatccaccatgctcgtgtcctgatcaggcaacgcca 467
>dbj|AK061350.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F09, full insert sequence Length = 972 Score = 452 bits (228), Expect = e-124 Identities = 360/404 (89%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||| ||||||| ||||||||||||||||||||||||||||||||| ||| | || || Sbjct: 65 atggttcacgtcagcttctaccgcaactatggtaagacattcaagaagccacgtcgccct 124 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 125 tacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgc 184 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcac 243 ||||||||||| ||| | || |||||||| |||||| | |||||||| ||||||||| Sbjct: 185 aagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcat 244 Query: 244 ttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgt 303 |||||||||| |||||||||||||| ||||| ||||||||||||| || || ||||| Sbjct: 245 ctgctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttcgc 304 Query: 304 cgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgcc 363 ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 305 cgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgcc 364 Query: 364 ctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatg 423 || |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 365 ctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatg 424 Query: 424 gcaaagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 || ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 425 gccaagtccatccaccatgctcgtgtcctgatcaggcaacgcca 468
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 412 bits (208), Expect = e-112 Identities = 334/376 (88%) Strand = Plus / Plus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 2969159 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 2969218 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 2969219 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 2969278 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| ||||||||| |||||||||| |||||||||||||| | Sbjct: 2969279 ctttgagccgtatccgtaacaatgcaaggcatctgctcacacttgatgagaagaatccac 2969338 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||||||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 2969339 gccgcatctttgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 2969398 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 2969399 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 2969458 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 2969459 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 2969518 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 2969519 tgatcaggcaacgcca 2969534 Score = 176 bits (89), Expect = 4e-41 Identities = 242/293 (82%) Strand = Plus / Plus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 |||| ||||| |||||||||||||||||||| || ||||| ||||||| ||||| || | Sbjct: 14844782 atggcaagactttcaagaaaccaaggcgtccatacgagaaagagcgtcctgatgctgagc 14844841 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | |||||| ||||||||||| || |||| |||| ||||||| ||| | || ||||| | Sbjct: 14844842 tgaagctgtatggtgagtatggcctcaggtccaagtgtgagctgtggcgtgtgcagtaag 14844901 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | | ||| ||||| |||||||||||| | ||||||| || ||||||||||| |||| Sbjct: 14844902 ccctaagccctatccgcaatgctgcaagggagctgctcacccttgatgagaagaaccccc 14844961 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 | |||||||||||||| | ||||| || || | ||||||||||||||| ||||||| || Sbjct: 14844962 gacgtatctttgagggcgaggctctcctgcgccacatgaaccgctatggtctccttggtg 14845021 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttcctt 384 |||||||| |||||||||||||||| ||||| || || | ||||||||||||| Sbjct: 14845022 agggccagaacaagcttgattacgtgcttgcgctcaccgttgagaacttcctt 14845074 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 2967792 atggttcacgtcagcttctaccgcaact 2967819
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 412 bits (208), Expect = e-112 Identities = 334/376 (88%) Strand = Plus / Minus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 9481 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 9422 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 9421 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 9362 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 9361 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 9302 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||| ||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 9301 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 9242 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 9241 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 9182 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 9181 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 9122 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 9121 tgatcaggcaacgcca 9106 Score = 404 bits (204), Expect = e-109 Identities = 333/376 (88%) Strand = Plus / Minus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 14240 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 14181 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 14180 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 14121 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 14120 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 14061 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||| ||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 14060 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 14001 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| ||||||||| || ||||||| Sbjct: 14000 atgggcagaacaagcttgattatgtccttgccctcactgttgagaactttctcgcaaggc 13941 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 13940 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 13881 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 13880 tgatcaggcaacgcca 13865 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 14927 atggttcacgtcagcttctaccgcaact 14900 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 10821 atggtccacgtcagcttctaccgcaact 10794
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 412 bits (208), Expect = e-112 Identities = 334/376 (88%) Strand = Plus / Minus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 120999 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 120940 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 120939 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 120880 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 120879 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 120820 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||| ||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 120819 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 120760 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 120759 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 120700 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 120699 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 120640 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 120639 tgatcaggcaacgcca 120624 Score = 404 bits (204), Expect = e-109 Identities = 333/376 (88%) Strand = Plus / Minus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 125758 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 125699 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 125698 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 125639 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 125638 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 125579 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||| ||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 125578 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 125519 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| ||||||||| || ||||||| Sbjct: 125518 atgggcagaacaagcttgattatgtccttgccctcactgttgagaactttctcgcaaggc 125459 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 125458 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 125399 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 125398 tgatcaggcaacgcca 125383 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 126445 atggttcacgtcagcttctaccgcaact 126418 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 122339 atggtccacgtcagcttctaccgcaact 122312
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 412 bits (208), Expect = e-112 Identities = 334/376 (88%) Strand = Plus / Plus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 106646 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 106705 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 106706 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 106765 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| ||||||||| |||||||||| |||||||||||||| | Sbjct: 106766 ctttgagccgtatccgtaacaatgcaaggcatctgctcacacttgatgagaagaatccac 106825 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||||||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 106826 gccgcatctttgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 106885 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 106886 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 106945 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 106946 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 107005 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 107006 tgatcaggcaacgcca 107021 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 105279 atggttcacgtcagcttctaccgcaact 105306
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 412 bits (208), Expect = e-112 Identities = 334/376 (88%) Strand = Plus / Plus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 22331817 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 22331876 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 22331877 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 22331936 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 22331937 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 22331996 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||| ||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 22331997 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 22332056 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 22332057 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 22332116 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 22332117 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 22332176 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 22332177 tgatcaggcaacgcca 22332192 Score = 404 bits (204), Expect = e-109 Identities = 333/376 (88%) Strand = Plus / Plus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 22327058 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 22327117 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 22327118 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 22327177 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 22327178 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 22327237 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||| ||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 22327238 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 22327297 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| ||||||||| || ||||||| Sbjct: 22327298 atgggcagaacaagcttgattatgtccttgccctcactgttgagaactttctcgcaaggc 22327357 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 22327358 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 22327417 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 22327418 tgatcaggcaacgcca 22327433 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 22330477 atggtccacgtcagcttctaccgcaact 22330504 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 22326371 atggttcacgtcagcttctaccgcaact 22326398 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 436 caccatgcccgtgtcttgatcaggcaac 463 |||||||| ||||||||||| ||||||| Sbjct: 19413196 caccatgctcgtgtcttgattaggcaac 19413169
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 412 bits (208), Expect = e-112 Identities = 334/376 (88%) Strand = Plus / Plus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 2969270 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 2969329 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 2969330 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 2969389 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| ||||||||| |||||||||| |||||||||||||| | Sbjct: 2969390 ctttgagccgtatccgtaacaatgcaaggcatctgctcacacttgatgagaagaatccac 2969449 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||||||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 2969450 gccgcatctttgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 2969509 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 2969510 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 2969569 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 2969570 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 2969629 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 2969630 tgatcaggcaacgcca 2969645 Score = 176 bits (89), Expect = 4e-41 Identities = 242/293 (82%) Strand = Plus / Plus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 |||| ||||| |||||||||||||||||||| || ||||| ||||||| ||||| || | Sbjct: 14839316 atggcaagactttcaagaaaccaaggcgtccatacgagaaagagcgtcctgatgctgagc 14839375 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | |||||| ||||||||||| || |||| |||| ||||||| ||| | || ||||| | Sbjct: 14839376 tgaagctgtatggtgagtatggcctcaggtccaagtgtgagctgtggcgtgtgcagtaag 14839435 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | | ||| ||||| |||||||||||| | ||||||| || ||||||||||| |||| Sbjct: 14839436 ccctaagccctatccgcaatgctgcaagggagctgctcacccttgatgagaagaaccccc 14839495 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 | |||||||||||||| | ||||| || || | ||||||||||||||| ||||||| || Sbjct: 14839496 gacgtatctttgagggcgaggctctcctgcgccacatgaaccgctatggtctccttggtg 14839555 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttcctt 384 |||||||| |||||||||||||||| ||||| || || | ||||||||||||| Sbjct: 14839556 agggccagaacaagcttgattacgtgcttgcgctcaccgttgagaacttcctt 14839608 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 2967903 atggttcacgtcagcttctaccgcaact 2967930
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 412 bits (208), Expect = e-112 Identities = 334/376 (88%) Strand = Plus / Plus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 22641728 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 22641787 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 22641788 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 22641847 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 22641848 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 22641907 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||| ||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 22641908 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 22641967 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 22641968 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 22642027 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 22642028 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 22642087 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 22642088 tgatcaggcaacgcca 22642103 Score = 404 bits (204), Expect = e-109 Identities = 333/376 (88%) Strand = Plus / Plus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 22636969 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 22637028 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 22637029 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 22637088 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 22637089 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 22637148 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 |||| ||||| ||||||| || || ||||| ||||||||||| |||||||||||||||| Sbjct: 22637149 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 22637208 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 391 | || ||| ||||||||||||| ||||||||||| |||| ||||||||| || ||||||| Sbjct: 22637209 atgggcagaacaagcttgattatgtccttgccctcactgttgagaactttctcgcaaggc 22637268 Query: 392 gccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 451 | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 22637269 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 22637328 Query: 452 tgatcaggcaacgcca 467 |||||||||||||||| Sbjct: 22637329 tgatcaggcaacgcca 22637344 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 22640388 atggtccacgtcagcttctaccgcaact 22640415 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaact 91 ||||| ||||||| |||||||||||||| Sbjct: 22636282 atggttcacgtcagcttctaccgcaact 22636309 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 436 caccatgcccgtgtcttgatcaggcaac 463 |||||||| ||||||||||| ||||||| Sbjct: 19572745 caccatgctcgtgtcttgattaggcaac 19572718
>gb|AY106684.1| Zea mays PCO086432 mRNA sequence Length = 965 Score = 287 bits (145), Expect = 2e-74 Identities = 343/409 (83%) Strand = Plus / Plus Query: 59 cagcaatggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggc 118 |||| |||||||| || |||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 104 cagccatggtgcatgttaacttctaccgcaactatgggaagactttcaagaagccaaggc 163 Query: 119 gtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactga 178 | || |||||||||||||| || ||||| || || |||||||| ||||||||||| ||| Sbjct: 164 ggccgtatgagaaggagcgcctagatgctgagctgaagctggttggtgagtatggcctgc 223 Query: 179 ggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaa 238 |||||||||||||||| ||| | || |||||||| ||||| | ||| | ||||| || | Sbjct: 224 ggtgcaagcgtgagctgtggcgcgtgcagtatgccctgagccgtatcaggaatgcagcca 283 Query: 239 ggcacttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttc 298 || | |||||||| |||||||||||||| || ||||||||||||||||| | || || | Sbjct: 284 gggagttgctcaccctggatgagaagaacccacgccgtatctttgagggcgaggcgctcc 343 Query: 299 ttcgtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtcc 358 | |||||||||||| | ||||| || |||| ||||| ||| |||||||||||||||| | Sbjct: 344 tccgtcgcatgaacagatatggtcttcttggcgagggacagaacaagcttgattacgtgc 403 Query: 359 ttgccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctg 418 ||||||| |||| |||||||||||| | ||||| ||||| | ||||||||| || Sbjct: 404 ttgccctcactgttgagaacttcctccagcgccgcctccagaccatcgtcttcaagaatg 463 Query: 419 gcatggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 ||||||| ||||||||||||||||| |||||| |||||||||| ||||| Sbjct: 464 gcatggccaagtccatccaccatgctcgtgtcctgatcaggcagcgcca 512
>gb|BT016876.1| Zea mays clone Contig709 mRNA sequence Length = 969 Score = 264 bits (133), Expect = 2e-67 Identities = 340/409 (83%) Strand = Plus / Minus Query: 59 cagcaatggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggc 118 |||| |||||||| || |||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 911 cagccatggtgcatgttaacttctaccgcaactatgggaagactttcaagaagccaaggc 852 Query: 119 gtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactga 178 | || |||||||||||||| || ||||| || || |||||||| ||||||||||| ||| Sbjct: 851 ggccgtatgagaaggagcgcctagatgctgagctgaagctggttggtgagtatggcctgc 792 Query: 179 ggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaa 238 |||||||||| ||||| ||| | || |||||||| ||||| | ||| | ||||| || | Sbjct: 791 ggtgcaagcgcgagctgtggcgcgtgcagtatgccctgagccgtatcaggaatgcagcca 732 Query: 239 ggcacttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttc 298 || | ||||||| |||||||||||||| || ||||||||||||||||| | || || | Sbjct: 731 gggagctgctcaccctggatgagaagaacccacgccgtatctttgagggcgaggcgctcc 672 Query: 299 ttcgtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtcc 358 | || ||||||||| | ||||| || |||| ||||| ||| |||||||||||||||| | Sbjct: 671 tccgccgcatgaacagatatggtcttcttggcgagggacagaacaagcttgattacgtgc 612 Query: 359 ttgccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctg 418 ||||||| |||| |||||||||||| | ||||| ||||| | ||||||||| || Sbjct: 611 ttgccctcactgttgagaacttcctccagcgccgcctccagaccatcgtcttcaagaatg 552 Query: 419 gcatggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 ||||||| ||||||||||||||||| |||||| |||||||||| ||||| Sbjct: 551 gcatggccaagtccatccaccatgctcgtgtcctgatcaggcagcgcca 503
>gb|BT016340.1| Zea mays clone Contig173 mRNA sequence Length = 806 Score = 240 bits (121), Expect = 3e-60 Identities = 336/405 (82%), Gaps = 2/405 (0%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||| || Sbjct: 83 atggtgcacgtgaacttctatcgcaactatggtaagactttcaagaagccaaggcggcct 142 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 |||||||||||||| || ||||| || | || | |||||||| ||||| ||||||||| Sbjct: 143 tatgagaaggagcgccttgatgctgagttgaaattagtgggtgaatatggcctgaggtgc 202 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcac 243 ||||||||||| ||| | || |||||||| | ||| | ||||| |||||||||||| | Sbjct: 203 aagcgtgagctgtggcgtgtgcagtatgccctcagccgcatccgaaatgctgcaagggag 262 Query: 244 ttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgt 303 ||||||| || ||||||||||| ||||| |||||||||||||| | || || || || Sbjct: 263 ctgctcacccttgatgagaagaacccccgtcgtatctttgagggcgaggcactcctgcgc 322 Query: 304 cgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgcc 363 ||||||||||||||||| || || | |||||||||| |||||||||| || || ||||| Sbjct: 323 cgcatgaaccgctatggtcttctcggtgagggccagaacaagcttgactatgtgcttgca 382 Query: 364 ctgactgctgagaacttccttgca-aggcgccttcagactcttgtcttcaaggctggcat 422 || || | ||||||||| | |||| | |||||||||||| ||||||||||| |||||| Sbjct: 383 ctcaccgttgagaactttc-tgcagcgccgccttcagactattgtcttcaagaatggcat 441 Query: 423 ggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 ||| |||||||| || || || ||||| | |||||||||||||| Sbjct: 442 ggcgaagtccattcatcacgctcgtgtgctcatcaggcaacgcca 486
>gb|AY105823.1| Zea mays PCO145462 mRNA sequence Length = 959 Score = 240 bits (121), Expect = 3e-60 Identities = 336/405 (82%), Gaps = 2/405 (0%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||| || Sbjct: 92 atggtgcacgtgaacttctatcgcaactatggtaagactttcaagaagccaaggcggcct 151 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 |||||||||||||| || ||||| || | || | |||||||| ||||| ||||||||| Sbjct: 152 tatgagaaggagcgccttgatgctgagttgaaattagtgggtgaatatggcctgaggtgc 211 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcac 243 ||||||||||| ||| | || |||||||| | ||| | ||||| |||||||||||| | Sbjct: 212 aagcgtgagctgtggcgtgtgcagtatgccctcagccgcatccgaaatgctgcaagggag 271 Query: 244 ttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgt 303 ||||||| || ||||||||||| ||||| |||||||||||||| | || || || || Sbjct: 272 ctgctcacccttgatgagaagaacccccgtcgtatctttgagggcgaggcactcctgcgc 331 Query: 304 cgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgcc 363 ||||||||||||||||| || || | |||||||||| |||||||||| || || ||||| Sbjct: 332 cgcatgaaccgctatggtcttctcggtgagggccagaacaagcttgactatgtgcttgca 391 Query: 364 ctgactgctgagaacttccttgca-aggcgccttcagactcttgtcttcaaggctggcat 422 || || | ||||||||| | |||| | ||||||||||| ||||||||||| |||||| Sbjct: 392 ctcaccgttgagaactttc-tgcagcgccgccttcagaccattgtcttcaagaatggcat 450 Query: 423 ggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 ||| |||||||| || ||||| ||||| | |||||||||||||| Sbjct: 451 ggcgaagtccattcatcatgctcgtgtgctcatcaggcaacgcca 495
>dbj|AK064760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H01, full insert sequence Length = 989 Score = 202 bits (102), Expect = 7e-49 Identities = 270/326 (82%) Strand = Plus / Plus Query: 59 cagcaatggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggc 118 |||| ||||||| ||| | |||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 90 cagccatggtgcgcgttagcttctatcgcaactatggcaagactttcaagaaaccaaggc 149 Query: 119 gtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactga 178 |||| || ||||| ||||||| ||||| || || |||||| ||||||||||| || | Sbjct: 150 gtccatacgagaaagagcgtcctgatgctgagctgaagctgtatggtgagtatggcctca 209 Query: 179 ggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaa 238 ||| |||| ||||||| ||| | || ||||| || | ||| ||||| |||||||||| Sbjct: 210 ggtccaagtgtgagctgtggcgtgtgcagtaagccctaagccctatccgcaatgctgcaa 269 Query: 239 ggcacttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttc 298 || | ||||||| || ||||||||||| ||||| |||||||||||||| | ||||| | Sbjct: 270 gggagctgctcacccttgatgagaagaacccccgacgtatctttgagggcgaggctctcc 329 Query: 299 ttcgtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtcc 358 | || | ||||||||||||||| ||||||| |||||||||| |||||||||||||||| | Sbjct: 330 tgcgccacatgaaccgctatggtctccttggtgagggccagaacaagcttgattacgtgc 389 Query: 359 ttgccctgactgctgagaacttcctt 384 |||| || || | ||||||||||||| Sbjct: 390 ttgcgctcaccgttgagaacttcctt 415
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 176 bits (89), Expect = 4e-41 Identities = 242/293 (82%) Strand = Plus / Minus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 |||| ||||| |||||||||||||||||||| || ||||| ||||||| ||||| || | Sbjct: 87986 atggcaagactttcaagaaaccaaggcgtccatacgagaaagagcgtcctgatgctgagc 87927 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 211 | |||||| ||||||||||| || |||| |||| ||||||| ||| | || ||||| | Sbjct: 87926 tgaagctgtatggtgagtatggcctcaggtccaagtgtgagctgtggcgtgtgcagtaag 87867 Query: 212 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 271 | | ||| ||||| |||||||||||| | ||||||| || ||||||||||| |||| Sbjct: 87866 ccctaagccctatccgcaatgctgcaagggagctgctcacccttgatgagaagaaccccc 87807 Query: 272 gccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctg 331 | |||||||||||||| | ||||| || || | ||||||||||||||| ||||||| || Sbjct: 87806 gacgtatctttgagggcgaggctctcctgcgccacatgaaccgctatggtctccttggtg 87747 Query: 332 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttcctt 384 |||||||| |||||||||||||||| ||||| || || | ||||||||||||| Sbjct: 87746 agggccagaacaagcttgattacgtgcttgcgctcaccgttgagaacttcctt 87694
>emb|AJ749993.1| Catharanthus roseus mRNA for 40S ribosomal protein S9 (rps9 gene) Length = 939 Score = 129 bits (65), Expect = 9e-27 Identities = 302/381 (79%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||||||||| ||| || ||||||||||||||||| |||||||| || | | ||| Sbjct: 93 atggtgcacgtttccttttatcgcaactatggtaagaccttcaagaagccccgtaggccc 152 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 ||||||||||||||| ||||||| || | ||||| || || || ||||| |||||||| Sbjct: 153 tatgagaaggagcgtttggatgctgagttgaagcttgttggagaatatgggttgaggtgc 212 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcac 243 ||| | ||||| |||||||| || |||| |||||| | ||| | ||||||||||| | Sbjct: 213 aagagggagctttggagggttcaatatgttttgagccgtatcagaaatgctgcaagaaat 272 Query: 244 ttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgt 303 | | || ||||||||||| | || || |||||||||||||||| ||| ||| | | Sbjct: 273 ctattgactttggatgagaaggacccacgtcgtatctttgagggtgaagcccttttgagg 332 Query: 304 cgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgcc 363 | |||||| | ||||| || |||| ||||||||| |||| |||||||| ||| | || Sbjct: 333 aggatgaacaggtatggtctgcttgatgagggccaaaacaaacttgattatgtcttggct 392 Query: 364 ctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatg 423 ||||||| ||||||||||||| | |||||||| || ||||| |||||| |||| ||| Sbjct: 393 ctgactgtagagaacttccttgagcgccgccttcaaacccttgttttcaagtctgggatg 452 Query: 424 gcaaagtccatccaccatgcc 444 |||||||| |||||||||||| Sbjct: 453 gcaaagtcaatccaccatgcc 473
>ref|NM_123348.1| Arabidopsis thaliana structural constituent of ribosome AT5G39850 mRNA, complete cds Length = 879 Score = 127 bits (64), Expect = 3e-26 Identities = 295/372 (79%) Strand = Plus / Plus Query: 79 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 138 |||||||| |||||||| || ||||||||||| ||| | ||||| |||||||| |||||| Sbjct: 47 ttctaccgaaactatgggaaaacattcaagaagccacgtcgtccttatgagaaagagcgt 106 Query: 139 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 198 || ||||| || |||||||| || || || || || || | || ||| | ||||| ||| Sbjct: 107 cttgatgctgagctaaagcttgttggagaatacggtcttcgttgtaagagagagctttgg 166 Query: 199 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 258 || || || ||| || | ||||| ||||||||||||||||| | | | || || ||| Sbjct: 167 agagttcaatatacacttagcagaatccgtaatgctgcaagagaactcttaactcttgat 226 Query: 259 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctat 318 ||||||||||| || ||||||||||| |||| |||||||||| | | ||||| || ||| Sbjct: 227 gagaagaatcctcgtcgtatctttgaaggtgaagctcttcttaggagaatgaatcgatat 286 Query: 319 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 378 || || |||| ||| |||| ||||||||||||| || ||||| |||||| |||||| Sbjct: 287 ggtcttcttgatgaaacccagaacaagcttgattatgttcttgctttgactgttgagaat 346 Query: 379 ttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggcaaagtccatccac 438 ||||||| | | || || || ||| ||||||| ||| |||| ||||| |||||||| ||| Sbjct: 347 ttccttgaacgtcgtctccaaactattgtctttaagtctggtatggctaagtccattcac 406 Query: 439 catgcccgtgtc 450 || || |||||| Sbjct: 407 cacgctcgtgtc 418
>gb|BT024915.1| Arabidopsis thaliana At5g39850 mRNA, complete cds Length = 594 Score = 127 bits (64), Expect = 3e-26 Identities = 295/372 (79%) Strand = Plus / Plus Query: 79 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 138 |||||||| |||||||| || ||||||||||| ||| | ||||| |||||||| |||||| Sbjct: 16 ttctaccgaaactatgggaaaacattcaagaagccacgtcgtccttatgagaaagagcgt 75 Query: 139 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 198 || ||||| || |||||||| || || || || || || | || ||| | ||||| ||| Sbjct: 76 cttgatgctgagctaaagcttgttggagaatacggtcttcgttgtaagagagagctttgg 135 Query: 199 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 258 || || || ||| || | ||||| ||||||||||||||||| | | | || || ||| Sbjct: 136 agagttcaatatacacttagcagaatccgtaatgctgcaagagaactcttaactcttgat 195 Query: 259 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctat 318 ||||||||||| || ||||||||||| |||| |||||||||| | | ||||| || ||| Sbjct: 196 gagaagaatcctcgtcgtatctttgaaggtgaagctcttcttaggagaatgaatcgatat 255 Query: 319 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 378 || || |||| ||| |||| ||||||||||||| || ||||| |||||| |||||| Sbjct: 256 ggtcttcttgatgaaacccagaacaagcttgattatgttcttgctttgactgttgagaat 315 Query: 379 ttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggcaaagtccatccac 438 ||||||| | | || || || ||| ||||||| ||| |||| ||||| |||||||| ||| Sbjct: 316 ttccttgaacgtcgtctccaaactattgtctttaagtctggtatggctaagtccattcac 375 Query: 439 catgcccgtgtc 450 || || |||||| Sbjct: 376 cacgctcgtgtc 387
>gb|AY088109.1| Arabidopsis thaliana clone 41408 mRNA, complete sequence Length = 880 Score = 127 bits (64), Expect = 3e-26 Identities = 295/372 (79%) Strand = Plus / Plus Query: 79 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 138 |||||||| |||||||| || ||||||||||| ||| | ||||| |||||||| |||||| Sbjct: 47 ttctaccgaaactatgggaaaacattcaagaagccacgtcgtccttatgagaaagagcgt 106 Query: 139 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 198 || ||||| || |||||||| || || || || || || | || ||| | ||||| ||| Sbjct: 107 cttgatgctgagctaaagcttgttggagaatacggtcttcgttgtaagagagagctttgg 166 Query: 199 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 258 || || || ||| || | ||||| ||||||||||||||||| | | | || || ||| Sbjct: 167 agagttcaatatacacttagcagaatccgtaatgctgcaagagaactcttaactcttgat 226 Query: 259 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctat 318 ||||||||||| || ||||||||||| |||| |||||||||| | | ||||| || ||| Sbjct: 227 gagaagaatcctcgtcgtatctttgaaggtgaagctcttcttaggagaatgaatcgatat 286 Query: 319 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 378 || || |||| ||| |||| ||||||||||||| || ||||| |||||| |||||| Sbjct: 287 ggtcttcttgatgaaacccagaacaagcttgattatgttcttgctttgactgttgagaat 346 Query: 379 ttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggcaaagtccatccac 438 ||||||| | | || || || ||| ||||||| ||| |||| ||||| |||||||| ||| Sbjct: 347 ttccttgaacgtcgtctccaaactattgtctttaagtctggtatggctaagtccattcac 406 Query: 439 catgcccgtgtc 450 || || |||||| Sbjct: 407 cacgctcgtgtc 418
>gb|DQ200374.1| Solanum tuberosum clone 059F12 unknown mRNA Length = 875 Score = 111 bits (56), Expect = 2e-21 Identities = 146/176 (82%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||||||||||||||| |||||||||||||| ||||| || ||||| || | ||||| Sbjct: 73 atggtgcacgtcaacttttaccgcaactatggaaagacctttaagaagcctcgacgtcct 132 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 |||||||||||| | |||||||||| | ||||| || || |||||||||||||||||| Sbjct: 133 tatgagaaggagaggttggatgcagagttgaagcttgttggagagtatggactgaggtgc 192 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaag 239 || | ||| | ||||| || |||||||| |||||| | ||| | ||||||||||| Sbjct: 193 aaaagggagttgtggagagttcagtatgctttgagccgtatcaggaatgctgcaag 248 Score = 46.1 bits (23), Expect = 0.10 Identities = 89/111 (80%) Strand = Plus / Plus Query: 330 tgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaag 389 |||| ||||| ||||||| ||||| ||| | || || |||| ||||||||||||| | | Sbjct: 339 tgagagccagaacaagctcgattatgtcttggcactcactgtcgagaacttccttgaacg 398 Query: 390 gcgccttcagactcttgtcttcaaggctggcatggcaaagtccatccacca 440 || || || || ||||| |||||| |||||||||| ||||| || ||||| Sbjct: 399 tcgtctgcaaacccttgtgttcaagactggcatggccaagtcaattcacca 449
>dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH19 Length = 77380 Score = 109 bits (55), Expect = 8e-21 Identities = 277/351 (78%) Strand = Plus / Plus Query: 100 acattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaactaaagctg 159 ||||||||||| ||| | ||||| |||||||| |||||||| ||||| || |||||||| Sbjct: 2999 acattcaagaagccacgtcgtccttatgagaaagagcgtcttgatgctgagctaaagctt 3058 Query: 160 gtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagc 219 || || || || || || | || ||| | ||||| ||||| || || ||| || | ||| Sbjct: 3059 gttggagaatacggtcttcgttgtaagagagagctttggagagttcaatatacacttagc 3118 Query: 220 aggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatccccgccgtatc 279 || ||||||||||||||||| | | | || || |||||||||||||| || |||||| Sbjct: 3119 agaatccgtaatgctgcaagagaactcttaactcttgatgagaagaatcctcgtcgtatc 3178 Query: 280 tttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctccttgctgagggccag 339 ||||| |||| |||||||||| | | ||||| || ||||| || |||| ||| |||| Sbjct: 3179 tttgaaggtgaagctcttcttaggagaatgaatcgatatggtcttcttgatgaaacccag 3238 Query: 340 gacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggcgccttcag 399 ||||||||||||| || ||||| |||||| |||||| ||||||| | | || || || Sbjct: 3239 aacaagcttgattatgttcttgctttgactgttgagaatttccttgaacgtcgtctccaa 3298 Query: 400 actcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtc 450 ||| ||||||| ||| |||| ||||| |||||||| ||||| || |||||| Sbjct: 3299 actattgtctttaagtctggtatggctaagtccattcaccacgctcgtgtc 3349
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 99.6 bits (50), Expect = 8e-18 Identities = 178/220 (80%), Gaps = 3/220 (1%) Strand = Plus / Minus Query: 245 tgctcacactggatgagaagaatc---cccgccgtatctttgagggtgcagctcttcttc 301 ||||||| |||||||||||||| |||| |||||||| ||||||| || || || | Sbjct: 25984912 tgctcaccctggatgagaagaacaacacccgtcgtatcttcgagggtgaggcgctcctcc 25984853 Query: 302 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 361 | ||||||||| ||||||| ||||||| ||||| ||| |||||||||||||||| |||| Sbjct: 25984852 gccgcatgaactgctatggtctccttggcgagggtcagaacaagcttgattacgtgcttg 25984793 Query: 362 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 421 | || |||| |||||||||||| | ||||| |||| | ||||||||| ||||| Sbjct: 25984792 cactcactgttgagaacttcctctagcgccgcctctagaccatcgtcttcaagaatggca 25984733 Query: 422 tggcaaagtccatccaccatgcccgtgtcttgatcaggca 461 |||| ||||| ||||||||||| |||||| | |||||||| Sbjct: 25984732 tggccaagtcaatccaccatgcacgtgtccttatcaggca 25984693 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 |||||||||| |||||||| |||||||| || ||||||||||||||||| ||||| || | Sbjct: 25984997 atggtaagactttcaagaagccaaggcggccatatgagaaggagcgtcttgatgctgagc 25984938 Query: 152 taaagctggtgggtgagtatgga 174 | ||||||||||| ||||||||| Sbjct: 25984937 tgaagctggtgggagagtatgga 25984915
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 99.6 bits (50), Expect = 8e-18 Identities = 178/220 (80%), Gaps = 3/220 (1%) Strand = Plus / Minus Query: 245 tgctcacactggatgagaagaatc---cccgccgtatctttgagggtgcagctcttcttc 301 ||||||| |||||||||||||| |||| |||||||| ||||||| || || || | Sbjct: 61924 tgctcaccctggatgagaagaacaacacccgtcgtatcttcgagggtgaggcgctcctcc 61865 Query: 302 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 361 | ||||||||| ||||||| ||||||| ||||| ||| |||||||||||||||| |||| Sbjct: 61864 gccgcatgaactgctatggtctccttggcgagggtcagaacaagcttgattacgtgcttg 61805 Query: 362 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 421 | || |||| |||||||||||| | ||||| |||| | ||||||||| ||||| Sbjct: 61804 cactcactgttgagaacttcctctagcgccgcctctagaccatcgtcttcaagaatggca 61745 Query: 422 tggcaaagtccatccaccatgcccgtgtcttgatcaggca 461 |||| ||||| ||||||||||| |||||| | |||||||| Sbjct: 61744 tggccaagtcaatccaccatgcacgtgtccttatcaggca 61705 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 |||||||||| |||||||| |||||||| || ||||||||||||||||| ||||| || | Sbjct: 62009 atggtaagactttcaagaagccaaggcggccatatgagaaggagcgtcttgatgctgagc 61950 Query: 152 taaagctggtgggtgagtatgga 174 | ||||||||||| ||||||||| Sbjct: 61949 tgaagctggtgggagagtatgga 61927
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 99.6 bits (50), Expect = 8e-18 Identities = 178/220 (80%), Gaps = 3/220 (1%) Strand = Plus / Minus Query: 245 tgctcacactggatgagaagaatc---cccgccgtatctttgagggtgcagctcttcttc 301 ||||||| |||||||||||||| |||| |||||||| ||||||| || || || | Sbjct: 18474 tgctcaccctggatgagaagaacaacacccgtcgtatcttcgagggtgaggcgctcctcc 18415 Query: 302 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 361 | ||||||||| ||||||| ||||||| ||||| ||| |||||||||||||||| |||| Sbjct: 18414 gccgcatgaactgctatggtctccttggcgagggtcagaacaagcttgattacgtgcttg 18355 Query: 362 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 421 | || |||| |||||||||||| | ||||| |||| | ||||||||| ||||| Sbjct: 18354 cactcactgttgagaacttcctctagcgccgcctctagaccatcgtcttcaagaatggca 18295 Query: 422 tggcaaagtccatccaccatgcccgtgtcttgatcaggca 461 |||| ||||| ||||||||||| |||||| | |||||||| Sbjct: 18294 tggccaagtcaatccaccatgcacgtgtccttatcaggca 18255 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 |||||||||| |||||||| |||||||| || ||||||||||||||||| ||||| || | Sbjct: 18559 atggtaagactttcaagaagccaaggcggccatatgagaaggagcgtcttgatgctgagc 18500 Query: 152 taaagctggtgggtgagtatgga 174 | ||||||||||| ||||||||| Sbjct: 18499 tgaagctggtgggagagtatgga 18477
>gb|BT013198.1| Lycopersicon esculentum clone 134354R, mRNA sequence Length = 963 Score = 95.6 bits (48), Expect = 1e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||||||||| ||| |||||||||||||| ||||| || ||||| || | ||||| Sbjct: 79 atggtgcacgtttccttttaccgcaactatgggaagacctttaagaagcctcgccgtcct 138 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 |||||||||||| | |||||||||| | ||||| || || |||||||||||||||||| Sbjct: 139 tatgagaaggagaggttggatgcagagttgaagcttgttggagagtatggactgaggtgc 198 Query: 184 aagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaag 239 ||| | ||| | ||||| || |||||||| |||||| | ||| | ||||||||||| Sbjct: 199 aagagggagttgtggagagttcagtatgctttgagccgtatcaggaatgctgcaag 254 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 335 gccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggcgcc 394 ||||| ||||||||||||||||| | || || |||| |||||||||||| | | | || | Sbjct: 350 gccagaacaagcttgattacgtcttggcactcactgttgagaacttcctcgaacgtcgtc 409 Query: 395 ttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgc 443 | || || |||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 410 tgcaaacacttgtcttcaagactggcatggccaagtcaatccaccatgc 458
>ref|NM_121524.3| Arabidopsis thaliana structural constituent of ribosome AT5G15200 mRNA, complete cds Length = 885 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||||||||| || ||||||||||||||| ||||| |||||| |||| | ||||| Sbjct: 48 atggtgcacgtttgctactaccgcaactatggaaagaccttcaagggaccacgtcgtcct 107 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| | | Sbjct: 108 tacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctgcgtaac 167 Query: 184 aagcgtgagctctggagggtccagta 209 ||||||||||||||||| || ||||| Sbjct: 168 aagcgtgagctctggagagtgcagta 193
>gb|BT011315.1| Arabidopsis thaliana At5g15200 gene, complete cds Length = 597 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||||||||| || ||||||||||||||| ||||| |||||| |||| | ||||| Sbjct: 1 atggtgcacgtttgctactaccgcaactatggaaagaccttcaagggaccacgtcgtcct 60 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| | | Sbjct: 61 tacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctgcgtaac 120 Query: 184 aagcgtgagctctggagggtccagta 209 ||||||||||||||||| || ||||| Sbjct: 121 aagcgtgagctctggagagtgcagta 146
>gb|BT010847.1| Arabidopsis thaliana At5g15200 mRNA, complete cds Length = 745 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||||||||| || ||||||||||||||| ||||| |||||| |||| | ||||| Sbjct: 27 atggtgcacgtttgctactaccgcaactatggaaagaccttcaagggaccacgtcgtcct 86 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| | | Sbjct: 87 tacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctgcgtaac 146 Query: 184 aagcgtgagctctggagggtccagta 209 ||||||||||||||||| || ||||| Sbjct: 147 aagcgtgagctctggagagtgcagta 172
>emb|BX829588.1|CNS0A17H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 803 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||||||||| || ||||||||||||||| ||||| |||||| |||| | ||||| Sbjct: 42 atggtgcacgtttgctactaccgcaactatggaaagaccttcaagggaccacgtcgtcct 101 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| | | Sbjct: 102 tacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctgcgtaac 161 Query: 184 aagcgtgagctctggagggtccagta 209 ||||||||||||||||| || ||||| Sbjct: 162 aagcgtgagctctggagagtgcagta 187
>gb|AY389659.1| Hyacinthus orientalis 40S ribosomal protein S9 (RPS9) mRNA, complete cds Length = 800 Score = 83.8 bits (42), Expect = 5e-13 Identities = 231/294 (78%) Strand = Plus / Plus Query: 88 aactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgca 147 |||||||| ||||| || |||||||| | ||||||||||||||||| ||||| ||||| Sbjct: 60 aactatggcaagacctttaagaaacctcgccgtccctatgagaaggaacgtcttgatgct 119 Query: 148 gaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccag 207 || | ||||| || |||||||||||||| || |||| | ||||| |||||||| ||| Sbjct: 120 gagttgaagcttgttggtgagtatggactcagagccaagagggagctgtggagggtgcag 179 Query: 208 tatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaat 267 |||| |||| || || || ||||| || ||||| | || || |||||||||| | | Sbjct: 180 tatgttctgagtagaatacgcaatgccgctaggcagctccttactctggatgagagggac 239 Query: 268 ccccgccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgctatgggctcctt 327 || |||||| | |||||||||| ||||| || ||| | ||| || ||||| || || Sbjct: 240 cctcgccgtgtatttgagggtgaggctctcctccgtaggatgcacaaatatggtcttctc 299 Query: 328 gctgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttc 381 | ||||| ||| |||||||||||||||||||||| |||||| ||||||||| Sbjct: 300 gatgaggagcagaacaagcttgattacgtccttgcattgactgtagagaacttc 353
>emb|BX829696.1|CNS0A1GO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 876 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 64 atggtgcacgtcaacttctaccgcaactatggtaagacattcaagaaaccaaggcgtccc 123 ||||||||||| || ||||||||||||||| ||||| |||||| |||| | ||||| Sbjct: 41 atggtgcacgtttgctactaccgcaactatggaaagaccttcaagggaccacgtcgtcct 100 Query: 124 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 183 || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| | | Sbjct: 101 tacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctgcgtaac 160 Query: 184 aagcgtgagctctggagggtccagta 209 ||||||||| ||||||| || ||||| Sbjct: 161 aagcgtgagttctggagagtgcagta 186
>gb|BT014007.1| Lycopersicon esculentum clone 133059F, mRNA sequence Length = 891 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 82 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 141 |||||||||||||| ||||| || ||||| || | || || |||||||||||||| || Sbjct: 82 taccgcaactatgggaagacctttaagaagcctcgacgcccttatgagaaggagcgattg 141 Query: 142 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagg 201 |||||||| | ||||| || || || ||||| |||||||||||| | ||||| ||||| Sbjct: 142 gatgcagagttgaagcttgttggagaatatgggctgaggtgcaagagagagctttggaga 201 Query: 202 gtccagtatgcattgagc 219 || |||||||| |||||| Sbjct: 202 gttcagtatgccttgagc 219 Score = 60.0 bits (30), Expect = 7e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 330 tgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaag 389 |||| ||||| ||||||||||||| ||| | ||||| |||| |||||||| |||| | Sbjct: 330 tgagagccagaacaagcttgattatgtcttggccctcactgtggagaactttcttgagcg 389 Query: 390 gcgccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgc 443 || || || || || ||||||||| |||||||||| ||||| ||||||||||| Sbjct: 390 tcgtctccaaaccctcgtcttcaagactggcatggctaagtcaatccaccatgc 443
>gb|AC151815.1| Solanum demissum chromosome 5 clone PGEC472P22 map MAP_LOC, complete sequence Length = 136150 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 118 cgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactg 177 |||||||||||||||||| | |||||||||| | ||||| || || |||||||||||| Sbjct: 119884 cgtccctatgagaaggagaggttggatgcagagttgaagcttgttggagagtatggactg 119943 Query: 178 aggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgca 237 ||||||| | ||| | ||||| || |||||||| |||||| | ||| | ||||||||| Sbjct: 119944 cggtgcaaaagggagttgtggagagttcagtatgctttgagccgtatcaggaatgctgca 120003 Query: 238 ag 239 || Sbjct: 120004 ag 120005 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 330 tgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaag 389 |||| ||||| ||||||| ||||| ||| | || || |||| |||||||||||||| | | Sbjct: 120096 tgagagccagaacaagctcgattatgtcttggcactcactgttgagaacttccttgaacg 120155 Query: 390 gcgccttcagactcttgtcttcaaggctggcatggcaaagtccatccacca 440 || || || || ||||| |||||| |||||||||| ||||| || ||||| Sbjct: 120156 tcgtctgcaaacccttgtgttcaagactggcatggctaagtcaattcacca 120206
>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project) Length = 103996 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 92 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 151 |||| ||||| |||||| |||| | ||||| || |||||||||||||| ||| | ||| Sbjct: 39956 atggaaagaccttcaagggaccacgtcgtccttacgagaaggagcgtcttgattctgaat 39897 Query: 152 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagta 209 | |||||||| ||||||||||| ||| | |||||||||||||||||| || ||||| Sbjct: 39896 tgaagctggttggtgagtatggtctgcgtaacaagcgtgagctctggagagtgcagta 39839
>gb|AF154636.1| Nicotiana tabacum clone PR5 mRNA sequence Length = 673 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 394 cttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgc 443 ||||| ||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 218 cttcaaactcttgtcttcaagactggcatggctaagtcaatccaccatgc 267
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 250 acactggatgagaagaatccccgccgtatctttgagggtg 289 |||||||||||||||||||| || || ||||||||||||| Sbjct: 53973 acactggatgagaagaatcctcgtcggatctttgagggtg 54012 Score = 46.1 bits (23), Expect = 0.10 Identities = 104/131 (79%) Strand = Plus / Plus Query: 82 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 141 ||||| |||||||| || || |||||||| || | ||||| ||||||||||||||| | Sbjct: 53805 taccgaaactatggcaaaactttcaagaagcctcgtcgtccttatgagaaggagcgttta 53864 Query: 142 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagg 201 ||||| || | ||||| || || ||||| || || | |||||||| ||||| |||||| Sbjct: 53865 gatgctgagttgaagctcgtcggagagtacggtcttcgctgcaagcgcgagctttggagg 53924 Query: 202 gtccagtatgc 212 || || ||||| Sbjct: 53925 gttcaatatgc 53935
>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3, complete sequence Length = 134390 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 250 acactggatgagaagaatccccgccgtatctttgagggtg 289 |||||||||||||||||||| || || ||||||||||||| Sbjct: 17265 acactggatgagaagaatcctcgtcggatctttgagggtg 17226 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 82 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 138 ||||| |||||||| || || |||||||| ||| | ||||| ||||||||||||||| Sbjct: 17433 taccgtaactatggcaaaactttcaagaagccacgtcgtccatatgagaaggagcgt 17377 Score = 46.1 bits (23), Expect = 0.10 Identities = 74/91 (81%) Strand = Plus / Minus Query: 341 acaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggcgccttcaga 400 ||||||||||||| || | || || |||| |||||| || |||| | | || ||||||| Sbjct: 17174 acaagcttgattatgtgttggctctcactgttgagaattttcttgaacgtcgtcttcaga 17115 Query: 401 ctcttgtcttcaaggctggcatggcaaagtc 431 ||||||| ||||| |||||||||| ||||| Sbjct: 17114 ctcttgtgttcaaatctggcatggctaagtc 17084
>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3, complete sequence Length = 122557 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Minus Query: 82 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 141 ||||| |||||||| || || |||||||| ||| | ||||| ||||||||||| ||| || Sbjct: 106082 taccgtaactatggcaaaactttcaagaagccacgtcgtccatatgagaaggaacgtttg 106023 Query: 142 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagg 201 ||||| || | ||||| || || ||||| || || | |||||||| ||||| |||||| Sbjct: 106022 gatgctgagttgaagctcgtcggagagtacggtcttcgctgcaagcgcgagctttggagg 105963 Query: 202 gtccagtatgc 212 || || ||||| Sbjct: 105962 gttcaatatgc 105952 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 82 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 141 ||||| |||||||| || || |||||||| ||| | ||||| ||||||||||||||| | Sbjct: 98808 taccgaaactatggcaaaactttcaagaagccacgtcgtccttatgagaaggagcgttta 98867 Query: 142 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagg 201 ||||| || | ||||| || || ||||| || || | |||||||| ||||| |||||| Sbjct: 98868 gatgctgagttgaagctcgtcggagagtacggtcttcgctgcaagcgcgagctttggagg 98927 Query: 202 gtccagtatgc 212 || || ||||| Sbjct: 98928 gttcaatatgc 98938 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 394 cttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgc 443 |||||||||||||| ||||| |||||||||| ||||| || |||||||| Sbjct: 105770 cttcagactcttgtgttcaaatctggcatggctaagtctattcaccatgc 105721 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 394 cttcagactcttgtcttcaaggctggcatggcaaagtc 431 |||||||||||||| ||||| |||||||||| ||||| Sbjct: 99120 cttcagactcttgtgttcaaatctggcatggctaagtc 99157
>dbj|AB226106.1| Aspergillus oryzae cDNA, contig sequence: AoEST2963 Length = 800 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 427 aagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 |||||||||||||| ||||||||| |||||| ||| ||||| Sbjct: 406 aagtccatccaccacgcccgtgtcctgatcaagcagcgcca 446
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 427 aagtccatccaccatgcccgtgtcttgatcaggcaacgcca 467 |||||||||||||| ||||||||| |||||| ||| ||||| Sbjct: 742513 aagtccatccaccacgcccgtgtcctgatcaagcagcgcca 742473
>dbj|AU066528.1| Chlamydomonas sp. HS-5 mRNA for 40S ribosomal protein S9, NaCl inducible, complete cds, clone:NaEX96-107 Length = 648 Score = 50.1 bits (25), Expect = 0.007 Identities = 94/117 (80%) Strand = Plus / Plus Query: 82 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 141 |||||||||||||| ||||| |||||||| || |||| || | ||||||||||| || Sbjct: 23 taccgcaactatggaaagacgttcaagaagccgcggcgcccattcgagaaggagcgcctc 82 Query: 142 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 198 |||| || || ||||| ||||| |||||||| ||| | |||||| ||||||||| Sbjct: 83 gatggcgagctgaagcttgtgggcgagtatggcctgcgcaacaagcgcgagctctgg 139
>ref|XM_533590.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S9 (LOC476387), mRNA Length = 696 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccgtgt 449 |||| ||||||||||||||||||||||| Sbjct: 385 tggccaagtccatccaccatgcccgtgt 412
>ref|XM_657315.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S9 (AN4803.2), mRNA Length = 582 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 427 aagtccatccaccatgcccgtgtcttgatca 457 |||||||||||||| ||||||||| |||||| Sbjct: 358 aagtccatccaccacgcccgtgtcctgatca 388
>gb|AF475098.1| Triticum aestivum 40S ribosomal protein S9 mRNA, partial cds Length = 210 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 445 cgtgtcttgatcaggcaacgcca 467 ||||||||||||||||||||||| Sbjct: 4 cgtgtcttgatcaggcaacgcca 26
>emb|BX841622.1|CNS09YLT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 876 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 127 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatgg 173 |||||||||||||| ||| | ||| | |||||||| ||||||||||| Sbjct: 104 gagaaggagcgtcttgattctgaattgaagctggttggtgagtatgg 150
>gb|BC076696.1| Xenopus tropicalis ribosomal protein S9, mRNA (cDNA clone MGC:79756 IMAGE:6984164), complete cds Length = 780 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccg 446 |||||||||||||||| |||||||| Sbjct: 384 tggcaaagtccatccatcatgcccg 408
>gb|BC073375.1| Xenopus laevis MGC80804 protein, mRNA (cDNA clone MGC:80804 IMAGE:5513712), complete cds Length = 890 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccgtgtcttgatcag 458 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 570 tggccaagtccatccatcatgcccgtgtgctgatcag 606
>gb|BC041242.1| Xenopus laevis ribosomal protein S9, mRNA (cDNA clone MGC:52774 IMAGE:4684220), complete cds Length = 698 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccgtgtcttgatcag 458 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 380 tggccaagtccatccatcatgcccgtgtgctgatcag 416
>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence Length = 129327 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 82 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 141 ||||| |||||||| || || |||||||| || | ||||| || |||||||||||| || Sbjct: 49313 taccgaaactatggcaaaactttcaagaagccccgtcgtccatacgagaaggagcgtttg 49372 Query: 142 gatgc 146 ||||| Sbjct: 49373 gatgc 49377 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 250 acactggatgagaagaatccccgccgtatctttgagggtgcagctctt 297 ||||||||||| ||||| || || || ||||| ||||||| ||||||| Sbjct: 49481 acactggatgaaaagaaccctcgtcggatcttcgagggtgaagctctt 49528
>ref|NM_001006812.1| Xenopus tropicalis ribosomal protein S9 (rps9), mRNA Length = 780 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccg 446 |||||||||||||||| |||||||| Sbjct: 384 tggcaaagtccatccatcatgcccg 408
>gb|AF402817.1| Ictalurus punctatus 40S ribosomal protein S9 mRNA, complete cds Length = 677 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 163 ggtgagtatggactgaggtgcaagcgtgagctctggagggt 203 ||||||||||| |||||| ||||||||| |||||||||| Sbjct: 111 ggtgagtatggtctgaggaataagcgtgaggtctggagggt 151
>emb|CR760722.2| Xenopus tropicalis finished cDNA, clone TGas113k07 Length = 683 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccg 446 |||||||||||||||| |||||||| Sbjct: 361 tggcaaagtccatccatcatgcccg 385
>gb|DQ213062.1| Taeniopygia guttata clone 0033P0001B11 40S ribosomal protein S9-like mRNA, complete sequence Length = 751 Score = 40.1 bits (20), Expect = 6.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 391 cgccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccg 446 ||||| ||||||| ||||||||| ||| |||| |||||||||||||| ||||| Sbjct: 370 cgcctgcagactcaggtcttcaagctgggcctggccaagtccatccaccacgcccg 425
>gb|AY769323.1| Bombyx mori ribosomal protein S9 (RpS9) mRNA, complete cds Length = 686 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 409 ttcaaggctggcatggcaaagtccatccaccatgcc 444 ||||| |||||| |||| ||||||||||| |||||| Sbjct: 400 ttcaaagctggcctggcgaagtccatccatcatgcc 435
>gb|BC080433.1| Xenopus laevis MGC86539 protein, mRNA (cDNA clone MGC:86539 IMAGE:3399194), complete cds Length = 2281 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gctccttgctgagggccagg 340 |||||||||||||||||||| Sbjct: 661 gctccttgctgagggccagg 642
>ref|XM_613451.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 1 (LOC533892), mRNA Length = 946 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccgtgt 449 |||| |||||||||||||| |||||||| Sbjct: 648 tggccaagtccatccaccacgcccgtgt 675
>ref|XM_872766.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 9 (LOC533892), mRNA Length = 766 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccgtgt 449 |||| |||||||||||||| |||||||| Sbjct: 468 tggccaagtccatccaccacgcccgtgt 495
>ref|XM_864261.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 3 (LOC533892), mRNA Length = 738 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccgtgt 449 |||| |||||||||||||| |||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgt 467
>ref|XM_872555.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 8 (LOC533892), mRNA Length = 910 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccgtgt 449 |||| |||||||||||||| |||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgt 467
>ref|XM_872464.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 7 (LOC533892), mRNA Length = 740 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccgtgt 449 |||| |||||||||||||| |||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgt 467
>ref|XM_872355.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 6 (LOC533892), mRNA Length = 727 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccgtgt 449 |||| |||||||||||||| |||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgt 467
>ref|XM_872145.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 4 (LOC533892), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 422 tggcaaagtccatccaccatgcccgtgt 449 |||| |||||||||||||| |||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgt 467
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 436 caccatgcccgtgtcttgatcaggcaac 463 |||||||| ||||||||||| ||||||| Sbjct: 131747 caccatgctcgtgtcttgattaggcaac 131720
>ref|XM_366876.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02952.4) partial mRNA Length = 576 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 aagtccatccaccatgcccgtgtc 450 |||||||||||||| ||||||||| Sbjct: 352 aagtccatccaccacgcccgtgtc 375
>gb|AC145392.2| Mus musculus BAC clone RP24-171E5 from chromosome Y, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 ctcttgtcttcaaggctggc 420 |||||||||||||||||||| Sbjct: 59578 ctcttgtcttcaaggctggc 59559
>gb|AC009470.4| Homo sapiens BAC clone RP11-125K7 from 11, complete sequence Length = 162511 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ttgccctgactgctgagaac 378 |||||||||||||||||||| Sbjct: 14871 ttgccctgactgctgagaac 14890
>gb|AC006584.12|AC006584 Mus musculus BAC GSMB-407A4 (Genome Systems Mouse BAC Library) complete sequence Length = 160288 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 ctcttgtcttcaaggctggc 420 |||||||||||||||||||| Sbjct: 43103 ctcttgtcttcaaggctggc 43122
>emb|X96613.1|PASU12 P.anserina su12 gene Length = 1379 Score = 40.1 bits (20), Expect = 6.3 Identities = 50/60 (83%) Strand = Plus / Plus Query: 391 cgccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtc 450 ||||| |||||||| |||| |||| ||| |||| |||||||||||||| || |||||| Sbjct: 922 cgcctccagactctcgtctacaagctcggcctggccaagtccatccaccacgctcgtgtc 981
>dbj|AP001266.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-770G2, complete sequence Length = 175872 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ttgccctgactgctgagaac 378 |||||||||||||||||||| Sbjct: 106983 ttgccctgactgctgagaac 107002 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,225,607 Number of Sequences: 3902068 Number of extensions: 3225607 Number of successful extensions: 70411 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70150 Number of HSP's gapped (non-prelim): 244 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
