ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl19c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory ... 155 2e-34
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
3dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
4dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
5dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
6dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
7dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
8gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700,... 46 0.10
9emb|CR555306.1| Azoarcus sp. EbN1 complete genome 44 0.40
10gb|BC015649.2| Homo sapiens BTB (POZ) domain containing 14A, mRN... 42 1.6
11gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 1.6
12ref|NM_144653.3| Homo sapiens BTB (POZ) domain containing 14A (B... 42 1.6
13emb|AL591038.9| Human DNA sequence from clone RP11-120E1 on chro... 42 1.6
14emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome;... 42 1.6
15emb|CR848842.7| Human DNA sequence from clone WI2-2998D17 on chr... 42 1.6
16gb|U16241.1|BTBBINH2 Bos taurus betaB inhibin/activin precursor,... 42 1.6
17ref|XM_927368.1| PREDICTED: Homo sapiens similar to BTB (POZ) do... 42 1.6
18ref|NM_176852.1| Bos taurus inhibin, beta B (activin AB beta pol... 42 1.6
19dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.6
20ref|NM_196031.1| Oryza sativa (japonica cultivar-group) unknown ... 40 6.2
21gb|AY430832.1| Uncultured prokaryote clone B04 NifJ (nifJ) gene,... 40 6.2
22gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
23ref|XM_979557.1| PREDICTED: Mus musculus similar to CG8312-PA, i... 40 6.2
24ref|XM_914541.2| PREDICTED: Mus musculus similar to CG8312-PA, i... 40 6.2
25ref|XM_890212.2| PREDICTED: Mus musculus similar to CG8312-PA, i... 40 6.2
26ref|XM_546282.2| PREDICTED: Canis familiaris similar to Heart- a... 40 6.2
27emb|X58355.1|BBBVGAS B.bronchiseptica bvg locus (transcription r... 40 6.2
28emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.2
29dbj|AB091101.2| Chlamydomonas reinhardtii Pgp1 gene for phosphog... 40 6.2
30dbj|AB191485.1| Chlamydomonas reinhardtii pgp1-1 gene for mutant... 40 6.2
31dbj|AK134570.1| Mus musculus adult male medulla oblongata cDNA, ... 40 6.2
32dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
34dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
35dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
36dbj|AK058583.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
37gb|AY107084.1| Zea mays PCO079799 mRNA sequence 40 6.2
38gb|AY106180.1| Zea mays PCO072957 mRNA sequence 40 6.2
39dbj|AP003087.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.2
40gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
41dbj|AP006430.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.2
42emb|AL807249.8| Mouse DNA sequence from clone RP23-25C1 on chrom... 40 6.2
43emb|X98485.1|PV14GENE P.vivax PV14 gene 40 6.2
44dbj|AB041806.1| Mus musculus brain cDNA, clone MNCb-2457 40 6.2 
>gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory burst oxidase
           protein B (rbohB) mRNA, complete cds
          Length = 3334

 Score =  155 bits (78), Expect = 2e-34
 Identities = 135/154 (87%)
 Strand = Plus / Plus

                                                                       
Query: 298 gacaggagcaagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaa 357
           ||||||| |||||||| ||| || ||||||||||| ||  |||||||||||||||| || 
Sbjct: 701 gacaggaccaagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcgaag 760

                                                                       
Query: 358 gttggcggcgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggc 417
           ||||||   |||||||||||||| ||||||||||||||||| || |||||||| ||||| 
Sbjct: 761 gttggcaatgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggt 820

                                             
Query: 418 gtcctgctccgttccagatttgggaaatgcattg 451
           || ||||||||||| |||||||||||||||||||
Sbjct: 821 gtgctgctccgttcaagatttgggaaatgcattg 854



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 173 ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 232
           |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 429 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 488

             
Query: 233 tg 234
           ||
Sbjct: 489 tg 490
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 2e-34
 Identities = 135/154 (87%)
 Strand = Plus / Minus

                                                                            
Query: 298      gacaggagcaagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaa 357
                ||||||| |||||||| ||| || ||||||||||| ||  |||||||||||||||| || 
Sbjct: 14609094 gacaggaccaagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaag 14609035

                                                                            
Query: 358      gttggcggcgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggc 417
                ||||||   |||||||||||||| ||||||||||||||||| || |||||||| ||||| 
Sbjct: 14609034 gttggcaatgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggt 14608975

                                                  
Query: 418      gtcctgctccgttccagatttgggaaatgcattg 451
                || ||||||||||| |||||||||||||||||||
Sbjct: 14608974 gtgctgctccgttcaagatttgggaaatgcattg 14608941



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                            
Query: 173      ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 232
                |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 14609366 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 14609307

                  
Query: 233      tg 234
                ||
Sbjct: 14609306 tg 14609305
to top
>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1164G11
          Length = 142699

 Score =  155 bits (78), Expect = 2e-34
 Identities = 135/154 (87%)
 Strand = Plus / Minus

                                                                         
Query: 298   gacaggagcaagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaa 357
             ||||||| |||||||| ||| || ||||||||||| ||  |||||||||||||||| || 
Sbjct: 90471 gacaggaccaagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaag 90412

                                                                         
Query: 358   gttggcggcgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggc 417
             ||||||   |||||||||||||| ||||||||||||||||| || |||||||| ||||| 
Sbjct: 90411 gttggcaatgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggt 90352

                                               
Query: 418   gtcctgctccgttccagatttgggaaatgcattg 451
             || ||||||||||| |||||||||||||||||||
Sbjct: 90351 gtgctgctccgttcaagatttgggaaatgcattg 90318



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 173   ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 232
             |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 90743 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 90684

               
Query: 233   tg 234
             ||
Sbjct: 90683 tg 90682
to top
>dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C16, full
           insert sequence
          Length = 3255

 Score =  155 bits (78), Expect = 2e-34
 Identities = 135/154 (87%)
 Strand = Plus / Plus

                                                                       
Query: 298 gacaggagcaagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaa 357
           ||||||| |||||||| ||| || ||||||||||| ||  |||||||||||||||| || 
Sbjct: 775 gacaggaccaagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaag 834

                                                                       
Query: 358 gttggcggcgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggc 417
           ||||||   |||||||||||||| ||||||||||||||||| || |||||||| ||||| 
Sbjct: 835 gttggcaatgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggt 894

                                             
Query: 418 gtcctgctccgttccagatttgggaaatgcattg 451
           || ||||||||||| |||||||||||||||||||
Sbjct: 895 gtgctgctccgttcaagatttgggaaatgcattg 928



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 173 ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 232
           |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 503 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 562

             
Query: 233 tg 234
           ||
Sbjct: 563 tg 564
to top
>dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G19, full
            insert sequence
          Length = 3731

 Score =  155 bits (78), Expect = 2e-34
 Identities = 135/154 (87%)
 Strand = Plus / Plus

                                                                        
Query: 298  gacaggagcaagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaa 357
            ||||||| |||||||| ||| || ||||||||||| ||  |||||||||||||||| || 
Sbjct: 1292 gacaggaccaagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaag 1351

                                                                        
Query: 358  gttggcggcgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggc 417
            ||||||   |||||||||||||| ||||||||||||||||| || |||||||| ||||| 
Sbjct: 1352 gttggcaatgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggt 1411

                                              
Query: 418  gtcctgctccgttccagatttgggaaatgcattg 451
            || ||||||||||| |||||||||||||||||||
Sbjct: 1412 gtgctgctccgttcaagatttgggaaatgcattg 1445
to top
>dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O12, full
           insert sequence
          Length = 3198

 Score =  155 bits (78), Expect = 2e-34
 Identities = 135/154 (87%)
 Strand = Plus / Plus

                                                                       
Query: 298 gacaggagcaagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaa 357
           ||||||| |||||||| ||| || ||||||||||| ||  |||||||||||||||| || 
Sbjct: 777 gacaggaccaagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaag 836

                                                                       
Query: 358 gttggcggcgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggc 417
           ||||||   |||||||||||||| ||||||||||||||||| || |||||||| ||||| 
Sbjct: 837 gttggcaatgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggt 896

                                             
Query: 418 gtcctgctccgttccagatttgggaaatgcattg 451
           || ||||||||||| |||||||||||||||||||
Sbjct: 897 gtgctgctccgttcaagatttgggaaatgcattg 930



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 173 ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 232
           |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 505 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 564

             
Query: 233 tg 234
           ||
Sbjct: 565 tg 566
to top
>dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B03, full
           insert sequence
          Length = 2978

 Score =  155 bits (78), Expect = 2e-34
 Identities = 135/154 (87%)
 Strand = Plus / Plus

                                                                       
Query: 298 gacaggagcaagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaa 357
           ||||||| |||||||| ||| || ||||||||||| ||  |||||||||||||||| || 
Sbjct: 414 gacaggaccaagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaag 473

                                                                       
Query: 358 gttggcggcgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggc 417
           ||||||   |||||||||||||| ||||||||||||||||| || |||||||| ||||| 
Sbjct: 474 gttggcaatgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggt 533

                                             
Query: 418 gtcctgctccgttccagatttgggaaatgcattg 451
           || ||||||||||| |||||||||||||||||||
Sbjct: 534 gtgctgctccgttcaagatttgggaaatgcattg 567



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 173 ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 232
           |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 142 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 201

             
Query: 233 tg 234
           ||
Sbjct: 202 tg 203
to top
>gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700, complete sequence
          Length = 410554

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 184    gacgacgacgaggtcgtcgagat 206
              |||||||||||||||||||||||
Sbjct: 248800 gacgacgacgaggtcgtcgagat 248822
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 186     cgacgacgaggtcgtcgagatcacgc 211
               |||||||||| |||||||||||||||
Sbjct: 3784052 cgacgacgagctcgtcgagatcacgc 3784077
to top
>gb|BC015649.2| Homo sapiens BTB (POZ) domain containing 14A, mRNA (cDNA clone
           MGC:23427 IMAGE:4654320), complete cds
          Length = 2088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 254 cggtggccgcggaggctgcggtggc 278
           |||||||||||| ||||||||||||
Sbjct: 746 cggtggccgcgggggctgcggtggc 770
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 182     aagacgacgacgaggtcgtcg 202
               |||||||||||||||||||||
Sbjct: 2195436 aagacgacgacgaggtcgtcg 2195416
to top
>ref|NM_144653.3| Homo sapiens BTB (POZ) domain containing 14A (BTBD14A), mRNA
          Length = 2103

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 254 cggtggccgcggaggctgcggtggc 278
           |||||||||||| ||||||||||||
Sbjct: 761 cggtggccgcgggggctgcggtggc 785
to top
>emb|AL591038.9| Human DNA sequence from clone RP11-120E1 on chromosome 9 Contains the
            5' end of gene MGC23427 and two CpG islands, complete
            sequence
          Length = 51295

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 254  cggtggccgcggaggctgcggtggc 278
            |||||||||||| ||||||||||||
Sbjct: 9088 cggtggccgcgggggctgcggtggc 9064
to top
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7
          Length = 349746

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 265    gaggctgcggtggccgccgcgagga 289
              |||||||||||||||||||| ||||
Sbjct: 295780 gaggctgcggtggccgccgcaagga 295804
to top
>emb|CR848842.7| Human DNA sequence from clone WI2-2998D17 on chromosome 1, complete
             sequence
          Length = 44069

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 254   cggtggccgcggaggctgcggtggc 278
             |||||||||||| ||||||||||||
Sbjct: 38481 cggtggccgcgggggctgcggtggc 38457
to top
>gb|U16241.1|BTBBINH2 Bos taurus betaB inhibin/activin precursor, gene, exon 2 and
           complete cds
          Length = 978

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 364 ggcgacggctgggccgctgtggagaagcg 392
           |||||| |||||||||| |||||||||||
Sbjct: 235 ggcgaccgctgggccgcggtggagaagcg 263
to top
>ref|XM_927368.1| PREDICTED: Homo sapiens similar to BTB (POZ) domain containing 14A
           (LOC653428), mRNA
          Length = 1737

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 254 cggtggccgcggaggctgcggtggc 278
           |||||||||||| ||||||||||||
Sbjct: 734 cggtggccgcgggggctgcggtggc 758
to top
>ref|NM_176852.1| Bos taurus inhibin, beta B (activin AB beta polypeptide) (INHBB),
           mRNA
          Length = 1227

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 364 ggcgacggctgggccgctgtggagaagcg 392
           |||||| |||||||||| |||||||||||
Sbjct: 628 ggcgaccgctgggccgcggtggagaagcg 656
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 192    cgaggtcgtcgagatcacgctcgac 216
              |||||||| ||||||||||||||||
Sbjct: 136257 cgaggtcgacgagatcacgctcgac 136281
to top
>ref|NM_196031.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0058E19.13), mRNA
          Length = 495

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 261 cgcggaggctgcggtggccgccgcgaggaaga 292
           ||||||||| | ||| ||||||||||||||||
Sbjct: 78  cgcggaggcggtggtcgccgccgcgaggaaga 47
to top
>gb|AY430832.1| Uncultured prokaryote clone B04 NifJ (nifJ) gene, partial cds
          Length = 472

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 359 ttggcggcgacggctgggcc 378
           ||||||||||||||||||||
Sbjct: 31  ttggcggcgacggctgggcc 12
to top
>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBa0058E19, complete sequence
          Length = 147706

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 261   cgcggaggctgcggtggccgccgcgaggaaga 292
             ||||||||| | ||| ||||||||||||||||
Sbjct: 85753 cgcggaggcggtggtcgccgccgcgaggaaga 85784
to top
>ref|XM_979557.1| PREDICTED: Mus musculus similar to CG8312-PA, isoform A
           (LOC625638), mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 caagagcaccgctgcggtgg 325
           ||||||||||||||||||||
Sbjct: 54  caagagcaccgctgcggtgg 35
to top
>ref|XM_914541.2| PREDICTED: Mus musculus similar to CG8312-PA, isoform A
           (LOC625638), mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 caagagcaccgctgcggtgg 325
           ||||||||||||||||||||
Sbjct: 54  caagagcaccgctgcggtgg 35
to top
>ref|XM_890212.2| PREDICTED: Mus musculus similar to CG8312-PA, isoform A
           (LOC625638), mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 caagagcaccgctgcggtgg 325
           ||||||||||||||||||||
Sbjct: 54  caagagcaccgctgcggtgg 35
to top
>ref|XM_546282.2| PREDICTED: Canis familiaris similar to Heart- and neural crest
           derivatives-expressed protein 1 (Extraembryonic tissues,
           heart, autonomic nervous system and neural crest
           derivatives-expressed protein 1) (eHAND) (LOC489164),
           mRNA
          Length = 1521

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 266 aggctgcggtggccgccgcg 285
           ||||||||||||||||||||
Sbjct: 562 aggctgcggtggccgccgcg 543
to top
>emb|X58355.1|BBBVGAS B.bronchiseptica bvg locus (transcription regulators of virulence
           factors) with bvgA and bvgS genes
          Length = 4534

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 cgtcgagatcacgctcgacg 217
           ||||||||||||||||||||
Sbjct: 955 cgtcgagatcacgctcgacg 974
to top
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    acgacgacgaggtcgtcgag 204
              ||||||||||||||||||||
Sbjct: 292615 acgacgacgaggtcgtcgag 292634
to top
>dbj|AB091101.2| Chlamydomonas reinhardtii Pgp1 gene for phosphoglycolate
           phosphatase precursor, complete cds
          Length = 5745

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 247 gtcaggccggtggccgcggaggctgcgg 274
           |||||||||||||||| ||| |||||||
Sbjct: 1   gtcaggccggtggccggggaagctgcgg 28
to top
>dbj|AB191485.1| Chlamydomonas reinhardtii pgp1-1 gene for mutant phosphoglycolate
           phosphatase precursor, complete cds
          Length = 5741

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 247 gtcaggccggtggccgcggaggctgcgg 274
           |||||||||||||||| ||| |||||||
Sbjct: 1   gtcaggccggtggccggggaagctgcgg 28
to top
>dbj|AK134570.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330416F17 product:hypothetical
           Pleckstrin-homology-related containing protein, full
           insert sequence
          Length = 2361

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 caagagcaccgctgcggtgg 325
           ||||||||||||||||||||
Sbjct: 54  caagagcaccgctgcggtgg 35
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 261      cgcggaggctgcggtggccgccgcgaggaaga 292
                ||||||||| | ||| ||||||||||||||||
Sbjct: 10595098 cgcggaggcggtggtcgccgccgcgaggaaga 10595067
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 262      gcggaggctgcggtggccgccgcg 285
                ||||||||||||||||| ||||||
Sbjct: 18726233 gcggaggctgcggtggcggccgcg 18726210



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 254      cggtggccgcggaggctgcg 273
                ||||||||||||||||||||
Sbjct: 15880189 cggtggccgcggaggctgcg 15880208
to top
>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_F01
          Length = 120026

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   cggtggccgcggaggctgcg 273
             ||||||||||||||||||||
Sbjct: 23864 cggtggccgcggaggctgcg 23883
to top
>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0071O21
          Length = 158410

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   gcggaggctgcggtggccgccgcg 285
             ||||||||||||||||| ||||||
Sbjct: 68875 gcggaggctgcggtggcggccgcg 68852
to top
>dbj|AK058583.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F11, full
           insert sequence
          Length = 750

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 261 cgcggaggctgcggtggccgccgcgaggaaga 292
           ||||||||| | ||| ||||||||||||||||
Sbjct: 141 cgcggaggcggtggtcgccgccgcgaggaaga 110
to top
>gb|AY107084.1| Zea mays PCO079799 mRNA sequence
          Length = 2167

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 252 gccggtggccgcggaggctgcggt 275
           |||| |||||||||||||||||||
Sbjct: 137 gccgttggccgcggaggctgcggt 160
to top
>gb|AY106180.1| Zea mays PCO072957 mRNA sequence
          Length = 718

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 360 tggcggcgacggctgggccgctgt 383
           ||||||||||||| ||||||||||
Sbjct: 414 tggcggcgacggcggggccgctgt 391
to top
>dbj|AP003087.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-594014, complete
             sequences
          Length = 100403

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aagaagaaggacatggctga 77
             ||||||||||||||||||||
Sbjct: 88455 aagaagaaggacatggctga 88474
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 261      cgcggaggctgcggtggccgccgcgaggaaga 292
                ||||||||| | ||| ||||||||||||||||
Sbjct: 10601137 cgcggaggcggtggtcgccgccgcgaggaaga 10601106
to top
>dbj|AP006430.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT33L13, TM0327,
             complete sequence
          Length = 105384

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   tggccgcggaggctgcggtggccg 280
             |||| |||||||||||||||||||
Sbjct: 83775 tggcggcggaggctgcggtggccg 83752
to top
>emb|AL807249.8| Mouse DNA sequence from clone RP23-25C1 on chromosome 4, complete
              sequence
          Length = 248479

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    caagagcaccgctgcggtgg 325
              ||||||||||||||||||||
Sbjct: 180934 caagagcaccgctgcggtgg 180953
to top
>emb|X98485.1|PV14GENE P.vivax PV14 gene
          Length = 2554

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   aagaagaaggacatggctga 77
            ||||||||||||||||||||
Sbjct: 2499 aagaagaaggacatggctga 2518
to top
>dbj|AB041806.1| Mus musculus brain cDNA, clone MNCb-2457
          Length = 2109

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 caagagcaccgctgcggtgg 325
           ||||||||||||||||||||
Sbjct: 796 caagagcaccgctgcggtgg 815


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,836,150
Number of Sequences: 3902068
Number of extensions: 3836150
Number of successful extensions: 72915
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72467
Number of HSP's gapped (non-prelim): 448
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top