Clone Name | bastl19c10 |
---|---|
Clone Library Name | barley_pub |
>PANK2_ARATH (Q8L5Y9) Pantothenate kinase 2 (EC 2.7.1.33) (Pantothenic acid| kinase 2) Length = 870 Score = 79.3 bits (194), Expect = 2e-15 Identities = 37/46 (80%), Positives = 41/46 (89%) Frame = +3 Query: 267 GTLEDRNPTILLPNQSDDISHLALDIGGSLIKLVYFSRHADQPTED 404 G LE+R+PTILLPNQSDDISHLALDIGGSLIKL+YFSRH D +D Sbjct: 28 GNLEERDPTILLPNQSDDISHLALDIGGSLIKLLYFSRHEDYSNDD 73
>PANK1_ARATH (O80765) Pantothenate kinase 1 (EC 2.7.1.33) (Pantothenic acid| kinase 1) (AtCoaA) Length = 383 Score = 42.0 bits (97), Expect = 3e-04 Identities = 20/27 (74%), Positives = 22/27 (81%) Frame = +3 Query: 321 ISHLALDIGGSLIKLVYFSRHADQPTE 401 ISHLALDIGG+LIKLVYFS + D E Sbjct: 6 ISHLALDIGGTLIKLVYFSANGDYSEE 32
>COFG_SYNEL (Q8DIR6) FO synthase subunit 1 (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1) Length = 315 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Frame = -1 Query: 202 TCRLLLWGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDG---WGDRLCSSVFGL 32 T +LL R +PS Q R ++ GEL F G L +G+ W + L + + Sbjct: 124 TPKLLQGVHRHAPSKDPQLRLHQLEQAGELGIPFTTGLLLGIGEAPQDWAETLTA----I 179 Query: 31 ARGVRHW 11 A G R W Sbjct: 180 AEGHRRW 186
>COFG_HALSA (Q9HNU9) FO synthase subunit 1 (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1) Length = 372 Score = 29.3 bits (64), Expect = 2.3 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = -1 Query: 172 KSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDGWGDRLCSSVFGLARGVRH 14 KSP ++R +ID+ G+L F G + +G+ W DR S + A RH Sbjct: 183 KSP----EQRLHTIDVAGDLGVPFTTGILVGIGEDWRDRAESLLAIRALHERH 231
>LRRK2_HUMAN (Q5S007) Leucine-rich repeat serine/threonine-protein kinase 2 (EC| 2.7.11.1) (Dardarin) Length = 2527 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = -3 Query: 158 RETKTESIDRSQGGTLNSICVGRNAAGW-GWMGGSALLLGLRPR 30 +E K S G + ++C+ +N A W G GG LLL L R Sbjct: 2399 KENKESKHKMSYSGRVKTLCLQKNTALWIGTGGGHILLLDLSTR 2442
>ULK1_MOUSE (O70405) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)| (Unc-51-like kinase 1) (Serine/threonine-protein kinase Unc51.1) Length = 1051 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +3 Query: 45 EEQSRSPHPSPTCSVSP 95 E R+P PSPTCS SP Sbjct: 396 ESHGRTPSPSPTCSSSP 412
>SODM_AGABI (Q9P4T6) Superoxide dismutase [Mn], mitochondrial precursor (EC| 1.15.1.1) Length = 200 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = -3 Query: 143 ESIDRSQGGT------LNSICVGRNAAGWGWMGGSALLLGLRPRSRRASLGT 6 ++ID++ GG N+ G +GWGW LG+ P ++R + T Sbjct: 96 DAIDQTFGGLDNLKKEFNTTTAGIQGSGWGW-------LGVNPSNKRLEIST 140
>VA5_VESFL (P35783) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves f 5) (Ves| f V) Length = 204 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/55 (27%), Positives = 25/55 (45%) Frame = -1 Query: 232 GMDQCRHQPPTCRLLLWGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDG 68 G ++ P + +W D + ++K + + LK TQ VW T +VG G Sbjct: 117 GSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNNFLKTGHYTQMVWANTKEVGCG 171
>VA5_VESVU (Q05110) Venom allergen 5 precursor (Antigen 5) (Ag5) (Allergen Ves| v 5) (Ves v V) Length = 227 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/55 (27%), Positives = 25/55 (45%) Frame = -1 Query: 232 GMDQCRHQPPTCRLLLWGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDG 68 G ++ P + +W D + ++K + + LK TQ VW T +VG G Sbjct: 140 GSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCG 194
>COFG_SYNY3 (P73191) FO synthase subunit 1 (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1) Length = 313 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -1 Query: 196 RLLLWGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGD 71 RLL R++PS Q R + L GEL F G L +G+ Sbjct: 124 RLLTTVHRQAPSKEPQLRLEQLRLAGELGIPFTTGLLLGIGE 165
>VA5_VESGE (P35784) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves g 5) (Ves| g V) Length = 204 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/55 (27%), Positives = 25/55 (45%) Frame = -1 Query: 232 GMDQCRHQPPTCRLLLWGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDG 68 G ++ P + +W D + ++K + + LK TQ VW T +VG G Sbjct: 117 GSTAAKYDNPVKLVKMWEDEVKDYNPKKKFSENNFLKIGHYTQMVWANTKEVGCG 171
>CH3L2_HUMAN (Q15782) Chitinase 3-like protein 2 precursor (YKL-39) (Chondrocyte| protein 39) Length = 390 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/43 (27%), Positives = 18/43 (41%) Frame = -1 Query: 136 SIDLKGELSTQFVWGETLQVGDGWGDRLCSSVFGLARGVRHWV 8 S D G + G + GW DR SS + + V +W+ Sbjct: 211 SFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWI 253
>SLAF8_MOUSE (Q9D3G2) SLAM family member 8 precursor (B-lymphocyte activator| macrophage expressed) Length = 278 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -1 Query: 202 TCRLLL--WGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDGWGDR 56 TC++ L W S + + ++D GE+ + F G+ L V G GD+ Sbjct: 143 TCQVFLSCWAPNISDITYSWRWEGTVDFNGEVRSHFSNGQVLSVSLGLGDK 193
>PANK4_RAT (Q923S8) Pantothenate kinase 4 (EC 2.7.1.33) (Pantothenic acid| kinase 4) (rPanK4) Length = 773 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +3 Query: 315 DDISHLALDIGGSLIKLVYFS 377 ++ A+DIGGSL KL Y+S Sbjct: 32 ENAKRFAIDIGGSLTKLAYYS 52
>PANK4_HUMAN (Q9NVE7) Pantothenate kinase 4 (EC 2.7.1.33) (Pantothenic acid| kinase 4) (hPanK4) Length = 773 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +3 Query: 315 DDISHLALDIGGSLIKLVYFS 377 ++ A+DIGGSL KL Y+S Sbjct: 32 ENAKRFAIDIGGSLTKLAYYS 52
>KLEG1_ECOLI (Q52282) Putative protein kleG| Length = 87 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/49 (38%), Positives = 23/49 (46%) Frame = -1 Query: 340 SRARWEMSSDWLGSRMVGLRSSRVPWI*CRRGGERRGMDQCRHQPPTCR 194 SR RW +R G R +R WI G+RRG RH+P T R Sbjct: 36 SRRRWRAGRPCSTTR-TGPRFARARWI--PTTGDRRGRRPQRHRPSTRR 81
>PANK2_HUMAN (Q9BZ23) Pantothenate kinase 2, mitochondrial precursor (EC| 2.7.1.33) (Pantothenic acid kinase 2) (hPANK2) Length = 570 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = +3 Query: 336 LDIGGSLIKLVYF 374 LDIGG+L+KLVYF Sbjct: 216 LDIGGTLVKLVYF 228
>PEPS_ASPSA (P52719) Carboxypeptidase cpdS precursor (EC 3.4.16.-)| Length = 523 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/53 (37%), Positives = 24/53 (45%) Frame = +1 Query: 109 LRVPP*DRSIDSVFVSRCLAIFDPPKAVAGRWAVGGGTDPSPSSPLPSYIKST 267 L VPP D S+ S V +A G G+DPS PLPS I+ T Sbjct: 361 LHVPPTDYSVCSETVI---------------FANGDGSDPSSWGPLPSVIERT 398
>COFG_SYNP6 (Q5N4D1) FO synthase subunit 1 (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1) Length = 336 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -1 Query: 175 RKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDGWGDRL 53 R +PS Q R + ++ GEL F G L +G+ DRL Sbjct: 145 RAAPSKDPQLRLQQLEQAGELGIPFTTGLLLGIGETSRDRL 185
>RSP3_CHLRE (P12759) Flagellar radial spoke protein 3| Length = 516 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 2/21 (9%) Frame = +2 Query: 23 AASEAEDRGAEP--IPPSIPN 79 AA+EAE+RG EP PPS+P+ Sbjct: 424 AAAEAEERGEEPPAEPPSLPD 444
>PA2G3_HUMAN (Q9NZ20) Group 3 secretory phospholipase A2 precursor (EC 3.1.1.4)| (Group III secretory phospholipase A2) (Phosphatidylcholine 2-acylhydrolase GIII) (GIII sPLA2) Length = 509 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = -1 Query: 352 EPPMSRARWEMSSDWLGSRMVGLRSSRVPWI*CRRGGERRGMDQCRHQ 209 + PM R +++ L GL+ W+ CR RR +DQC HQ Sbjct: 330 QDPMVSPRLDVAPTGLQGPQGGLKPQGARWV-CR--SFRRHLDQCEHQ 374 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,319,853 Number of Sequences: 219361 Number of extensions: 1037516 Number of successful extensions: 3439 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3322 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3435 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)