ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl19c10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PANK2_ARATH (Q8L5Y9) Pantothenate kinase 2 (EC 2.7.1.33) (Pantot... 79 2e-15
2PANK1_ARATH (O80765) Pantothenate kinase 1 (EC 2.7.1.33) (Pantot... 42 3e-04
3COFG_SYNEL (Q8DIR6) FO synthase subunit 1 (EC 2.5.1.-) (7,8-dide... 30 1.4
4COFG_HALSA (Q9HNU9) FO synthase subunit 1 (EC 2.5.1.-) (7,8-dide... 29 2.3
5LRRK2_HUMAN (Q5S007) Leucine-rich repeat serine/threonine-protei... 28 4.0
6ULK1_MOUSE (O70405) Serine/threonine-protein kinase ULK1 (EC 2.7... 28 4.0
7SODM_AGABI (Q9P4T6) Superoxide dismutase [Mn], mitochondrial pre... 28 4.0
8VA5_VESFL (P35783) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ... 28 5.2
9VA5_VESVU (Q05110) Venom allergen 5 precursor (Antigen 5) (Ag5) ... 28 5.2
10COFG_SYNY3 (P73191) FO synthase subunit 1 (EC 2.5.1.-) (7,8-dide... 28 5.2
11VA5_VESGE (P35784) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ... 28 6.8
12CH3L2_HUMAN (Q15782) Chitinase 3-like protein 2 precursor (YKL-3... 28 6.8
13SLAF8_MOUSE (Q9D3G2) SLAM family member 8 precursor (B-lymphocyt... 28 6.8
14PANK4_RAT (Q923S8) Pantothenate kinase 4 (EC 2.7.1.33) (Pantothe... 28 6.8
15PANK4_HUMAN (Q9NVE7) Pantothenate kinase 4 (EC 2.7.1.33) (Pantot... 28 6.8
16KLEG1_ECOLI (Q52282) Putative protein kleG 28 6.8
17PANK2_HUMAN (Q9BZ23) Pantothenate kinase 2, mitochondrial precur... 28 6.8
18PEPS_ASPSA (P52719) Carboxypeptidase cpdS precursor (EC 3.4.16.-) 27 8.9
19COFG_SYNP6 (Q5N4D1) FO synthase subunit 1 (EC 2.5.1.-) (7,8-dide... 27 8.9
20RSP3_CHLRE (P12759) Flagellar radial spoke protein 3 27 8.9
21PA2G3_HUMAN (Q9NZ20) Group 3 secretory phospholipase A2 precurso... 27 8.9

>PANK2_ARATH (Q8L5Y9) Pantothenate kinase 2 (EC 2.7.1.33) (Pantothenic acid|
           kinase 2)
          Length = 870

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +3

Query: 267 GTLEDRNPTILLPNQSDDISHLALDIGGSLIKLVYFSRHADQPTED 404
           G LE+R+PTILLPNQSDDISHLALDIGGSLIKL+YFSRH D   +D
Sbjct: 28  GNLEERDPTILLPNQSDDISHLALDIGGSLIKLLYFSRHEDYSNDD 73



to top

>PANK1_ARATH (O80765) Pantothenate kinase 1 (EC 2.7.1.33) (Pantothenic acid|
           kinase 1) (AtCoaA)
          Length = 383

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +3

Query: 321 ISHLALDIGGSLIKLVYFSRHADQPTE 401
           ISHLALDIGG+LIKLVYFS + D   E
Sbjct: 6   ISHLALDIGGTLIKLVYFSANGDYSEE 32



to top

>COFG_SYNEL (Q8DIR6) FO synthase subunit 1 (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
           subunit 1)
          Length = 315

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = -1

Query: 202 TCRLLLWGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDG---WGDRLCSSVFGL 32
           T +LL    R +PS   Q R   ++  GEL   F  G  L +G+    W + L +    +
Sbjct: 124 TPKLLQGVHRHAPSKDPQLRLHQLEQAGELGIPFTTGLLLGIGEAPQDWAETLTA----I 179

Query: 31  ARGVRHW 11
           A G R W
Sbjct: 180 AEGHRRW 186



to top

>COFG_HALSA (Q9HNU9) FO synthase subunit 1 (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
           subunit 1)
          Length = 372

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -1

Query: 172 KSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDGWGDRLCSSVFGLARGVRH 14
           KSP    ++R  +ID+ G+L   F  G  + +G+ W DR  S +   A   RH
Sbjct: 183 KSP----EQRLHTIDVAGDLGVPFTTGILVGIGEDWRDRAESLLAIRALHERH 231



to top

>LRRK2_HUMAN (Q5S007) Leucine-rich repeat serine/threonine-protein kinase 2 (EC|
            2.7.11.1) (Dardarin)
          Length = 2527

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 158  RETKTESIDRSQGGTLNSICVGRNAAGW-GWMGGSALLLGLRPR 30
            +E K      S  G + ++C+ +N A W G  GG  LLL L  R
Sbjct: 2399 KENKESKHKMSYSGRVKTLCLQKNTALWIGTGGGHILLLDLSTR 2442



to top

>ULK1_MOUSE (O70405) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)|
           (Unc-51-like kinase 1) (Serine/threonine-protein kinase
           Unc51.1)
          Length = 1051

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 45  EEQSRSPHPSPTCSVSP 95
           E   R+P PSPTCS SP
Sbjct: 396 ESHGRTPSPSPTCSSSP 412



to top

>SODM_AGABI (Q9P4T6) Superoxide dismutase [Mn], mitochondrial precursor (EC|
           1.15.1.1)
          Length = 200

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
 Frame = -3

Query: 143 ESIDRSQGGT------LNSICVGRNAAGWGWMGGSALLLGLRPRSRRASLGT 6
           ++ID++ GG        N+   G   +GWGW       LG+ P ++R  + T
Sbjct: 96  DAIDQTFGGLDNLKKEFNTTTAGIQGSGWGW-------LGVNPSNKRLEIST 140



to top

>VA5_VESFL (P35783) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves f 5) (Ves|
           f V)
          Length = 204

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -1

Query: 232 GMDQCRHQPPTCRLLLWGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDG 68
           G    ++  P   + +W D     + ++K + +  LK    TQ VW  T +VG G
Sbjct: 117 GSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNNFLKTGHYTQMVWANTKEVGCG 171



to top

>VA5_VESVU (Q05110) Venom allergen 5 precursor (Antigen 5) (Ag5) (Allergen Ves|
           v 5) (Ves v V)
          Length = 227

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -1

Query: 232 GMDQCRHQPPTCRLLLWGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDG 68
           G    ++  P   + +W D     + ++K + +  LK    TQ VW  T +VG G
Sbjct: 140 GSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCG 194



to top

>COFG_SYNY3 (P73191) FO synthase subunit 1 (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
           subunit 1)
          Length = 313

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -1

Query: 196 RLLLWGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGD 71
           RLL    R++PS   Q R   + L GEL   F  G  L +G+
Sbjct: 124 RLLTTVHRQAPSKEPQLRLEQLRLAGELGIPFTTGLLLGIGE 165



to top

>VA5_VESGE (P35784) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves g 5) (Ves|
           g V)
          Length = 204

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -1

Query: 232 GMDQCRHQPPTCRLLLWGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDG 68
           G    ++  P   + +W D     + ++K + +  LK    TQ VW  T +VG G
Sbjct: 117 GSTAAKYDNPVKLVKMWEDEVKDYNPKKKFSENNFLKIGHYTQMVWANTKEVGCG 171



to top

>CH3L2_HUMAN (Q15782) Chitinase 3-like protein 2 precursor (YKL-39) (Chondrocyte|
           protein 39)
          Length = 390

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -1

Query: 136 SIDLKGELSTQFVWGETLQVGDGWGDRLCSSVFGLARGVRHWV 8
           S D  G      + G    +  GW DR  SS + +   V +W+
Sbjct: 211 SFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWI 253



to top

>SLAF8_MOUSE (Q9D3G2) SLAM family member 8 precursor (B-lymphocyte activator|
           macrophage expressed)
          Length = 278

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 202 TCRLLL--WGDRKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDGWGDR 56
           TC++ L  W    S  +   +   ++D  GE+ + F  G+ L V  G GD+
Sbjct: 143 TCQVFLSCWAPNISDITYSWRWEGTVDFNGEVRSHFSNGQVLSVSLGLGDK 193



to top

>PANK4_RAT (Q923S8) Pantothenate kinase 4 (EC 2.7.1.33) (Pantothenic acid|
           kinase 4) (rPanK4)
          Length = 773

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 315 DDISHLALDIGGSLIKLVYFS 377
           ++    A+DIGGSL KL Y+S
Sbjct: 32  ENAKRFAIDIGGSLTKLAYYS 52



to top

>PANK4_HUMAN (Q9NVE7) Pantothenate kinase 4 (EC 2.7.1.33) (Pantothenic acid|
           kinase 4) (hPanK4)
          Length = 773

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 315 DDISHLALDIGGSLIKLVYFS 377
           ++    A+DIGGSL KL Y+S
Sbjct: 32  ENAKRFAIDIGGSLTKLAYYS 52



to top

>KLEG1_ECOLI (Q52282) Putative protein kleG|
          Length = 87

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = -1

Query: 340 SRARWEMSSDWLGSRMVGLRSSRVPWI*CRRGGERRGMDQCRHQPPTCR 194
           SR RW        +R  G R +R  WI     G+RRG    RH+P T R
Sbjct: 36  SRRRWRAGRPCSTTR-TGPRFARARWI--PTTGDRRGRRPQRHRPSTRR 81



to top

>PANK2_HUMAN (Q9BZ23) Pantothenate kinase 2, mitochondrial precursor (EC|
           2.7.1.33) (Pantothenic acid kinase 2) (hPANK2)
          Length = 570

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +3

Query: 336 LDIGGSLIKLVYF 374
           LDIGG+L+KLVYF
Sbjct: 216 LDIGGTLVKLVYF 228



to top

>PEPS_ASPSA (P52719) Carboxypeptidase cpdS precursor (EC 3.4.16.-)|
          Length = 523

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = +1

Query: 109 LRVPP*DRSIDSVFVSRCLAIFDPPKAVAGRWAVGGGTDPSPSSPLPSYIKST 267
           L VPP D S+ S  V                +A G G+DPS   PLPS I+ T
Sbjct: 361 LHVPPTDYSVCSETVI---------------FANGDGSDPSSWGPLPSVIERT 398



to top

>COFG_SYNP6 (Q5N4D1) FO synthase subunit 1 (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
           subunit 1)
          Length = 336

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 175 RKSPSSARQKRNRSIDLKGELSTQFVWGETLQVGDGWGDRL 53
           R +PS   Q R + ++  GEL   F  G  L +G+   DRL
Sbjct: 145 RAAPSKDPQLRLQQLEQAGELGIPFTTGLLLGIGETSRDRL 185



to top

>RSP3_CHLRE (P12759) Flagellar radial spoke protein 3|
          Length = 516

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
 Frame = +2

Query: 23  AASEAEDRGAEP--IPPSIPN 79
           AA+EAE+RG EP   PPS+P+
Sbjct: 424 AAAEAEERGEEPPAEPPSLPD 444



to top

>PA2G3_HUMAN (Q9NZ20) Group 3 secretory phospholipase A2 precursor (EC 3.1.1.4)|
           (Group III secretory phospholipase A2)
           (Phosphatidylcholine 2-acylhydrolase GIII) (GIII sPLA2)
          Length = 509

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -1

Query: 352 EPPMSRARWEMSSDWLGSRMVGLRSSRVPWI*CRRGGERRGMDQCRHQ 209
           + PM   R +++   L     GL+     W+ CR    RR +DQC HQ
Sbjct: 330 QDPMVSPRLDVAPTGLQGPQGGLKPQGARWV-CR--SFRRHLDQCEHQ 374


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,319,853
Number of Sequences: 219361
Number of extensions: 1037516
Number of successful extensions: 3439
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3435
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top