>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  139 bits (70), Expect = 8e-30
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                            
Query: 261      atccacggcaccctcgaggaccgcaaccccaccatcctgctgcccaaccagtccgacgac 320
                |||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 20627451 atccacggcaacctggaggaccgcaacccgaccatcctgctgcctaaccagtccgacgac 20627510

                                          
Query: 321      atctcccacctcgccctcgacatcgg 346
                ||||||||||||||||||||||||||
Sbjct: 20627511 atctcccacctcgccctcgacatcgg 20627536



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 196      ggcaggtgggcggttggtggcggc 219
                ||||||||||||||||||||||||
Sbjct: 20627217 ggcaggtgggcggttggtggcggc 20627240

>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1112_E07
          Length = 132055

 Score =  139 bits (70), Expect = 8e-30
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                         
Query: 261   atccacggcaccctcgaggaccgcaaccccaccatcctgctgcccaaccagtccgacgac 320
             |||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 21062 atccacggcaacctggaggaccgcaacccgaccatcctgctgcctaaccagtccgacgac 21121

                                       
Query: 321   atctcccacctcgccctcgacatcgg 346
             ||||||||||||||||||||||||||
Sbjct: 21122 atctcccacctcgccctcgacatcgg 21147



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 196   ggcaggtgggcggttggtggcggc 219
             ||||||||||||||||||||||||
Sbjct: 20828 ggcaggtgggcggttggtggcggc 20851

>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0515E01
          Length = 140063

 Score =  139 bits (70), Expect = 8e-30
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                         
Query: 261   atccacggcaccctcgaggaccgcaaccccaccatcctgctgcccaaccagtccgacgac 320
             |||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 93109 atccacggcaacctggaggaccgcaacccgaccatcctgctgcctaaccagtccgacgac 93168

                                       
Query: 321   atctcccacctcgccctcgacatcgg 346
             ||||||||||||||||||||||||||
Sbjct: 93169 atctcccacctcgccctcgacatcgg 93194



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 196   ggcaggtgggcggttggtggcggc 219
             ||||||||||||||||||||||||
Sbjct: 92875 ggcaggtgggcggttggtggcggc 92898

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 329     cctcgccctcgacatcggcggc 350
               ||||||||||||||||||||||
Sbjct: 1245687 cctcgccctcgacatcggcggc 1245708

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 329     cctcgccctcgacatcggcggc 350
               ||||||||||||||||||||||
Sbjct: 1666730 cctcgccctcgacatcggcggc 1666751

>ref|XM_527644.1| PREDICTED: Pan troglodytes eukaryotic translation initiation factor
           3, subunit 9 eta, 116kDa (LOC472269), mRNA
          Length = 2319

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 313 ccgacgacatctcccacctcg 333
           |||||||||||||||||||||
Sbjct: 359 ccgacgacatctcccacctcg 339

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 331     tcgccctcgacatcggcggct 351
               |||||||||||||||||||||
Sbjct: 2819509 tcgccctcgacatcggcggct 2819489

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 55       gccgatccccccatccatccc 75
                |||||||||||||||||||||
Sbjct: 32014911 gccgatccccccatccatccc 32014891

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 121      ccttgagatcgatcgatcgat 141
                |||||||||||||||||||||
Sbjct: 28169427 ccttgagatcgatcgatcgat 28169447

>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0625E02
          Length = 153921

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   ccttgagatcgatcgatcgat 141
             |||||||||||||||||||||
Sbjct: 24972 ccttgagatcgatcgatcgat 24992

>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0450A04
          Length = 162545

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    ccttgagatcgatcgatcgat 141
              |||||||||||||||||||||
Sbjct: 152723 ccttgagatcgatcgatcgat 152743

>dbj|AK099285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128I11, full
           insert sequence
          Length = 3035

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  gccgatccccccatccatccc 75
           |||||||||||||||||||||
Sbjct: 103 gccgatccccccatccatccc 123

>dbj|AK072594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125K02, full
           insert sequence
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  gccgatccccccatccatccc 75
           |||||||||||||||||||||
Sbjct: 131 gccgatccccccatccatccc 151

>dbj|AK066646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071L19, full
           insert sequence
          Length = 2918

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  gccgatccccccatccatccc 75
           |||||||||||||||||||||
Sbjct: 93  gccgatccccccatccatccc 113

>dbj|AK066078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050K18, full
           insert sequence
          Length = 3096

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  gccgatccccccatccatccc 75
           |||||||||||||||||||||
Sbjct: 169 gccgatccccccatccatccc 189

>dbj|AK061122.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G04, full
            insert sequence
          Length = 1666

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 121  ccttgagatcgatcgatcgat 141
            |||||||||||||||||||||
Sbjct: 1245 ccttgagatcgatcgatcgat 1225

>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
             complete sequence
          Length = 141752

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    gccgatccccccatccatccc 75
             |||||||||||||||||||||
Sbjct: 35618 gccgatccccccatccatccc 35598

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 318    gacatctcccacctcgccctcgacatcggcgg 349
              |||||| ||||||||||||||| ||| |||||
Sbjct: 626231 gacatcgcccacctcgccctcggcatgggcgg 626200

>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     gcacgccgcgagcgaggccgaaga 42
              |||||||||| |||||||||||||
Sbjct: 554117 gcacgccgcgtgcgaggccgaaga 554140

>ref|XM_482679.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 297

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 208 gttggtggcggcactgatcc 227
           ||||||||||||||||||||
Sbjct: 24  gttggtggcggcactgatcc 43

>gb|AY644470.1| Homo sapiens interferon gamma receptor 2 (interferon gamma transducer
             1) (IFNGR2) gene, complete cds
          Length = 38374

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   ccaccatcctgctgcccaac 308
             ||||||||||||||||||||
Sbjct: 38371 ccaccatcctgctgcccaac 38352

>ref|XM_390114.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG09938.1)
           partial mRNA
          Length = 1740

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 134 cgatcgattccgtttttgtc 153
           ||||||||||||||||||||
Sbjct: 965 cgatcgattccgtttttgtc 946

>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
             sequence
          Length = 139999

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   cttgagatcgatcgatcgat 141
             ||||||||||||||||||||
Sbjct: 91485 cttgagatcgatcgatcgat 91504

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      cttgagatcgatcgatcgat 141
                ||||||||||||||||||||
Sbjct: 22636816 cttgagatcgatcgatcgat 22636835

>dbj|AP000045.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 16/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   ccaccatcctgctgcccaac 308
             ||||||||||||||||||||
Sbjct: 61079 ccaccatcctgctgcccaac 61060

>gb|AC093496.2| Homo sapiens chromosome 3 clone RP11-536I6 map 3p, complete sequence
          Length = 184041

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   caaccccaccatcctgctgc 303
             ||||||||||||||||||||
Sbjct: 94706 caaccccaccatcctgctgc 94725

>gb|AC090941.2| Homo sapiens chromosome 3 clone RP11-16L19 map 3p, complete sequence
          Length = 187159

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    caaccccaccatcctgctgc 303
              ||||||||||||||||||||
Sbjct: 178887 caaccccaccatcctgctgc 178906

>dbj|AP001717.1| Homo sapiens genomic DNA, chromosome 21q, section 61/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   ccaccatcctgctgcccaac 308
             ||||||||||||||||||||
Sbjct: 48229 ccaccatcctgctgcccaac 48210

>emb|BX537378.1|HSM805673 Homo sapiens mRNA; cDNA DKFZp686C2482 (from clone DKFZp686C2482);
            complete cds
          Length = 3084

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  ccaccatcctgctgcccaac 308
            ||||||||||||||||||||
Sbjct: 2687 ccaccatcctgctgcccaac 2706

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      cttgagatcgatcgatcgat 141
                ||||||||||||||||||||
Sbjct: 22649284 cttgagatcgatcgatcgat 22649303

>dbj|AP000189.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 16/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   ccaccatcctgctgcccaac 308
             ||||||||||||||||||||
Sbjct: 67055 ccaccatcctgctgcccaac 67036

>dbj|AP000300.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:PACB5, complete sequence
          Length = 56188

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   ccaccatcctgctgcccaac 308
             ||||||||||||||||||||
Sbjct: 33847 ccaccatcctgctgcccaac 33828

>dbj|AP000113.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 16/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   ccaccatcctgctgcccaac 308
             ||||||||||||||||||||
Sbjct: 67055 ccaccatcctgctgcccaac 67036


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,261,517
Number of Sequences: 3902068
Number of extensions: 2261517
Number of successful extensions: 53713
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53170
Number of HSP's gapped (non-prelim): 543
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)