ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl19c02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463008.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.19 mRNA Length = 2712 Score = 260 bits (131), Expect = 4e-66 Identities = 262/305 (85%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 174 gaggtgccgccggcggacgtgccgcggcaggactcgctctaccgcgacgccaccaggccc 233 |||| ||||||| |||||| | | |||||||||| |||||||||||||| || |||| Sbjct: 94 gaggcgccgccgttggacgtcctgaggcaggactccctctaccgcgacgcgacgcggccg 153 Query: 234 gcccacggcggccaccatggacaggacaactgggtgaggacgctgcggctgggattccag 293 ||||||||| |||||||||||||| | |||| ||||||||||||||||||| |||||| Sbjct: 154 gcccacggc---caccatggacaggagagctggatgaggacgctgcggctggggttccag 210 Query: 294 tgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctccaacacc 353 |||||||| ||||| ||||||||||||| ||||||||||||||||| | | ||||| Sbjct: 211 tgcgtgggaatcctgcacgccgacctcggcacgtcgccgctctacgtgtaccagaacaca 270 Query: 354 ttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatcatctac 413 |||||||||||| || ||||||||||||| | | |||||||||||||||||||||||| Sbjct: 271 ttcaagtacggcatcaagcacgaggacgacatcatcggcgtcctctccctcatcatctac 330 Query: 414 agcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaacgacgac 473 |||||| | || ||| |||||||||||||| |||||||||| ||| ||||||||||||| Sbjct: 331 agcttcgtgctattcaccatggtcaagatcgtcttcatcgccctccacgccaacgacgat 390 Query: 474 ggcga 478 ||||| Sbjct: 391 ggcga 395
>dbj|AK066919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089M07, full insert sequence Length = 2907 Score = 260 bits (131), Expect = 4e-66 Identities = 262/305 (85%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 174 gaggtgccgccggcggacgtgccgcggcaggactcgctctaccgcgacgccaccaggccc 233 |||| ||||||| |||||| | | |||||||||| |||||||||||||| || |||| Sbjct: 308 gaggcgccgccgttggacgtcctgaggcaggactccctctaccgcgacgcgacgcggccg 367 Query: 234 gcccacggcggccaccatggacaggacaactgggtgaggacgctgcggctgggattccag 293 ||||||||| |||||||||||||| | |||| ||||||||||||||||||| |||||| Sbjct: 368 gcccacggc---caccatggacaggagagctggatgaggacgctgcggctggggttccag 424 Query: 294 tgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctccaacacc 353 |||||||| ||||| ||||||||||||| ||||||||||||||||| | | ||||| Sbjct: 425 tgcgtgggaatcctgcacgccgacctcggcacgtcgccgctctacgtgtaccagaacaca 484 Query: 354 ttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatcatctac 413 |||||||||||| || ||||||||||||| | | |||||||||||||||||||||||| Sbjct: 485 ttcaagtacggcatcaagcacgaggacgacatcatcggcgtcctctccctcatcatctac 544 Query: 414 agcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaacgacgac 473 |||||| | || ||| |||||||||||||| |||||||||| ||| ||||||||||||| Sbjct: 545 agcttcgtgctattcaccatggtcaagatcgtcttcatcgccctccacgccaacgacgat 604 Query: 474 ggcga 478 ||||| Sbjct: 605 ggcga 609
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 214 bits (108), Expect = 2e-52 Identities = 189/216 (87%) Strand = Plus / Minus Query: 263 ctgggtgaggacgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgg 322 |||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 20814272 ctggatgaggacgctgcggctggggttccagtgcgtgggaatcctgcacgccgacctcgg 20814213 Query: 323 gacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacga 382 ||||||||||||||||| | | ||||| |||||||||||| || |||||||||||| Sbjct: 20814212 cacgtcgccgctctacgtgtaccagaacacattcaagtacggcatcaagcacgaggacga 20814153 Query: 383 cgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagat 442 | | | |||||||||||||||||||||||||||||| | || ||| ||||||||||||| Sbjct: 20814152 catcatcggcgtcctctccctcatcatctacagcttcgtgctattcaccatggtcaagat 20814093 Query: 443 catcttcatcgcgctctacgccaacgacgacggcga 478 | |||||||||| ||| ||||||||||||| ||||| Sbjct: 20814092 cgtcttcatcgccctccacgccaacgacgatggcga 20814057 Score = 117 bits (59), Expect = 3e-23 Identities = 158/191 (82%) Strand = Plus / Minus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||||||||||| || || |||| ||| ||||||| |||||||| | ||| | ||| Sbjct: 20791823 ttccagtgcgtgggaatactgtacggggacatcgggacatcgccgctgttcgtgtactcg 20791764 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| |||||| |||||||| | ||| ||| ||| |||| |||| ||||||||||||| Sbjct: 20791763 agcacgttcaaggacggcgtccgccacccggatgacctgctcggcgccctctccctcatc 20791704 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||||||||| ||||||| |||| |||||| | |||||||||| ||| ||||||| Sbjct: 20791703 atctacagcttcgccctcttcaccatcgtcaagtacgtcttcatcgccctccgcgccaac 20791644 Query: 468 gacgacggcga 478 ||||||||||| Sbjct: 20791643 gacgacggcga 20791633 Score = 63.9 bits (32), Expect = 4e-07 Identities = 152/192 (79%) Strand = Plus / Minus Query: 263 ctgggtgaggacgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgg 322 ||||| ||||||| || | |||| |||||||||||||| ||||| |||| |||| | || Sbjct: 20871692 ctgggggaggacgatgagtctggcgttccagtgcgtggggatcctgtacggcgacattgg 20871633 Query: 323 gacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacga 382 ||||||| || | ||||||| ||||| ||| || || ||||| | |||||| || || Sbjct: 20871632 gacgtcgtcgttgtacgtctactccagcacttttgagcacggcattgggcaccccgatga 20871573 Query: 383 cgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagat 442 ||| | || || |||||||||||| ||||||||||| | |||||| || | ||||||| Sbjct: 20871572 cgtcgtcggggtgctctccctcatcgtctacagcttcatgctcttcaccgtcatcaagat 20871513 Query: 443 catcttcatcgc 454 | ||||| |||| Sbjct: 20871512 cgtcttcgtcgc 20871501 Score = 54.0 bits (27), Expect = 4e-04 Identities = 71/85 (83%), Gaps = 3/85 (3%) Strand = Plus / Minus Query: 174 gaggtgccgccggcggacgtgccgcggcaggactcgctctaccgcgacgccaccaggccc 233 |||| ||||||| |||||| | | |||||||||| |||||||||||||| || |||| Sbjct: 20814615 gaggcgccgccgttggacgtcctgaggcaggactccctctaccgcgacgcgacgcggccg 20814556 Query: 234 gcccacggcggccaccatggacagg 258 ||||| ||||||||||||||||| Sbjct: 20814555 gccca---cggccaccatggacagg 20814534
>gb|AC134887.4| Oryza sativa chromosome 3 BAC OSJNBa0029P07 genomic sequence, complete sequence Length = 142047 Score = 214 bits (108), Expect = 2e-52 Identities = 189/216 (87%) Strand = Plus / Minus Query: 263 ctgggtgaggacgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgg 322 |||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 104555 ctggatgaggacgctgcggctggggttccagtgcgtgggaatcctgcacgccgacctcgg 104496 Query: 323 gacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacga 382 ||||||||||||||||| | | ||||| |||||||||||| || |||||||||||| Sbjct: 104495 cacgtcgccgctctacgtgtaccagaacacattcaagtacggcatcaagcacgaggacga 104436 Query: 383 cgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagat 442 | | | |||||||||||||||||||||||||||||| | || ||| ||||||||||||| Sbjct: 104435 catcatcggcgtcctctccctcatcatctacagcttcgtgctattcaccatggtcaagat 104376 Query: 443 catcttcatcgcgctctacgccaacgacgacggcga 478 | |||||||||| ||| ||||||||||||| ||||| Sbjct: 104375 cgtcttcatcgccctccacgccaacgacgatggcga 104340 Score = 117 bits (59), Expect = 3e-23 Identities = 158/191 (82%) Strand = Plus / Minus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||||||||||| || || |||| ||| ||||||| |||||||| | ||| | ||| Sbjct: 82038 ttccagtgcgtgggaatactgtacggggacatcgggacatcgccgctgttcgtgtactcg 81979 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| |||||| |||||||| | ||| ||| ||| |||| |||| ||||||||||||| Sbjct: 81978 agcacgttcaaggacggcgtccgccacccggatgacctgctcggcgccctctccctcatc 81919 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||||||||| ||||||| |||| |||||| | |||||||||| ||| ||||||| Sbjct: 81918 atctacagcttcgccctcttcaccatcgtcaagtacgtcttcatcgccctccgcgccaac 81859 Query: 468 gacgacggcga 478 ||||||||||| Sbjct: 81858 gacgacggcga 81848 Score = 54.0 bits (27), Expect = 4e-04 Identities = 71/85 (83%), Gaps = 3/85 (3%) Strand = Plus / Minus Query: 174 gaggtgccgccggcggacgtgccgcggcaggactcgctctaccgcgacgccaccaggccc 233 |||| ||||||| |||||| | | |||||||||| |||||||||||||| || |||| Sbjct: 104898 gaggcgccgccgttggacgtcctgaggcaggactccctctaccgcgacgcgacgcggccg 104839 Query: 234 gcccacggcggccaccatggacagg 258 ||||| ||||||||||||||||| Sbjct: 104838 gccca---cggccaccatggacagg 104817
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 214 bits (108), Expect = 2e-52 Identities = 189/216 (87%) Strand = Plus / Minus Query: 263 ctgggtgaggacgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgg 322 |||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 20807474 ctggatgaggacgctgcggctggggttccagtgcgtgggaatcctgcacgccgacctcgg 20807415 Query: 323 gacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacga 382 ||||||||||||||||| | | ||||| |||||||||||| || |||||||||||| Sbjct: 20807414 cacgtcgccgctctacgtgtaccagaacacattcaagtacggcatcaagcacgaggacga 20807355 Query: 383 cgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagat 442 | | | |||||||||||||||||||||||||||||| | || ||| ||||||||||||| Sbjct: 20807354 catcatcggcgtcctctccctcatcatctacagcttcgtgctattcaccatggtcaagat 20807295 Query: 443 catcttcatcgcgctctacgccaacgacgacggcga 478 | |||||||||| ||| ||||||||||||| ||||| Sbjct: 20807294 cgtcttcatcgccctccacgccaacgacgatggcga 20807259 Score = 117 bits (59), Expect = 3e-23 Identities = 158/191 (82%) Strand = Plus / Minus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||||||||||| || || |||| ||| ||||||| |||||||| | ||| | ||| Sbjct: 20784957 ttccagtgcgtgggaatactgtacggggacatcgggacatcgccgctgttcgtgtactcg 20784898 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| |||||| |||||||| | ||| ||| ||| |||| |||| ||||||||||||| Sbjct: 20784897 agcacgttcaaggacggcgtccgccacccggatgacctgctcggcgccctctccctcatc 20784838 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||||||||| ||||||| |||| |||||| | |||||||||| ||| ||||||| Sbjct: 20784837 atctacagcttcgccctcttcaccatcgtcaagtacgtcttcatcgccctccgcgccaac 20784778 Query: 468 gacgacggcga 478 ||||||||||| Sbjct: 20784777 gacgacggcga 20784767 Score = 63.9 bits (32), Expect = 4e-07 Identities = 152/192 (79%) Strand = Plus / Minus Query: 263 ctgggtgaggacgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgg 322 ||||| ||||||| || | |||| |||||||||||||| ||||| |||| |||| | || Sbjct: 20864721 ctgggggaggacgatgagtctggcgttccagtgcgtggggatcctgtacggcgacattgg 20864662 Query: 323 gacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacga 382 ||||||| || | ||||||| ||||| ||| || || ||||| | |||||| || || Sbjct: 20864661 gacgtcgtcgttgtacgtctactccagcacttttgagcacggcattgggcaccccgatga 20864602 Query: 383 cgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagat 442 ||| | || || |||||||||||| ||||||||||| | |||||| || | ||||||| Sbjct: 20864601 cgtcgtcggggtgctctccctcatcgtctacagcttcatgctcttcaccgtcatcaagat 20864542 Query: 443 catcttcatcgc 454 | ||||| |||| Sbjct: 20864541 cgtcttcgtcgc 20864530 Score = 54.0 bits (27), Expect = 4e-04 Identities = 71/85 (83%), Gaps = 3/85 (3%) Strand = Plus / Minus Query: 174 gaggtgccgccggcggacgtgccgcggcaggactcgctctaccgcgacgccaccaggccc 233 |||| ||||||| |||||| | | |||||||||| |||||||||||||| || |||| Sbjct: 20807817 gaggcgccgccgttggacgtcctgaggcaggactccctctaccgcgacgcgacgcggccg 20807758 Query: 234 gcccacggcggccaccatggacagg 258 ||||| ||||||||||||||||| Sbjct: 20807757 gccca---cggccaccatggacagg 20807736
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12 map MAP_LOC, complete sequence Length = 167323 Score = 214 bits (108), Expect = 2e-52 Identities = 189/216 (87%) Strand = Plus / Plus Query: 263 ctgggtgaggacgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgg 322 |||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 108071 ctggatgaggacgctgcggctggggttccagtgcgtgggaatcctgcacgccgacctcgg 108130 Query: 323 gacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacga 382 ||||||||||||||||| | | ||||| |||||||||||| || |||||||||||| Sbjct: 108131 cacgtcgccgctctacgtgtaccagaacacattcaagtacggcatcaagcacgaggacga 108190 Query: 383 cgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagat 442 | | | |||||||||||||||||||||||||||||| | || ||| ||||||||||||| Sbjct: 108191 catcatcggcgtcctctccctcatcatctacagcttcgtgctattcaccatggtcaagat 108250 Query: 443 catcttcatcgcgctctacgccaacgacgacggcga 478 | |||||||||| ||| ||||||||||||| ||||| Sbjct: 108251 cgtcttcatcgccctccacgccaacgacgatggcga 108286 Score = 117 bits (59), Expect = 3e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||||||||||| || || |||| ||| ||||||| |||||||| | ||| | ||| Sbjct: 130520 ttccagtgcgtgggaatactgtacggggacatcgggacatcgccgctgttcgtgtactcg 130579 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| |||||| |||||||| | ||| ||| ||| |||| |||| ||||||||||||| Sbjct: 130580 agcacgttcaaggacggcgtccgccacccggatgacctgctcggcgccctctccctcatc 130639 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||||||||| ||||||| |||| |||||| | |||||||||| ||| ||||||| Sbjct: 130640 atctacagcttcgccctcttcaccatcgtcaagtacgtcttcatcgccctccgcgccaac 130699 Query: 468 gacgacggcga 478 ||||||||||| Sbjct: 130700 gacgacggcga 130710 Score = 63.9 bits (32), Expect = 4e-07 Identities = 152/192 (79%) Strand = Plus / Plus Query: 263 ctgggtgaggacgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgg 322 ||||| ||||||| || | |||| |||||||||||||| ||||| |||| |||| | || Sbjct: 50820 ctgggggaggacgatgagtctggcgttccagtgcgtggggatcctgtacggcgacattgg 50879 Query: 323 gacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacga 382 ||||||| || | ||||||| ||||| ||| || || ||||| | |||||| || || Sbjct: 50880 gacgtcgtcgttgtacgtctactccagcacttttgagcacggcattgggcaccccgatga 50939 Query: 383 cgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagat 442 ||| | || || |||||||||||| ||||||||||| | |||||| || | ||||||| Sbjct: 50940 cgtcgtcggggtgctctccctcatcgtctacagcttcatgctcttcaccgtcatcaagat 50999 Query: 443 catcttcatcgc 454 | ||||| |||| Sbjct: 51000 cgtcttcgtcgc 51011 Score = 54.0 bits (27), Expect = 4e-04 Identities = 71/85 (83%), Gaps = 3/85 (3%) Strand = Plus / Plus Query: 174 gaggtgccgccggcggacgtgccgcggcaggactcgctctaccgcgacgccaccaggccc 233 |||| ||||||| |||||| | | |||||||||| |||||||||||||| || |||| Sbjct: 107728 gaggcgccgccgttggacgtcctgaggcaggactccctctaccgcgacgcgacgcggccg 107787 Query: 234 gcccacggcggccaccatggacagg 258 ||||| ||||||||||||||||| Sbjct: 107788 gccca---cggccaccatggacagg 107809
>emb|AJ427973.1|OSA427973 Oryza sativa partial mRNA for putative potasium transporter (HAK16 gene) Length = 2202 Score = 141 bits (71), Expect = 2e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 324 acgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacgac 383 ||||||||||||||||| | | ||||| |||||||||||| || ||||||||||||| Sbjct: 4 acgtcgccgctctacgtgtaccagaacacattcaagtacggcatcaagcacgaggacgac 63 Query: 384 gtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagatc 443 | | |||||||||||||||||||||||||||||| | || ||| |||||||||||||| Sbjct: 64 atcatcggcgtcctctccctcatcatctacagcttcgtgctattcaccatggtcaagatc 123 Query: 444 atcttcatcgcgctctacgccaacgacgacggcga 478 |||||||||| ||| ||||||||||||| ||||| Sbjct: 124 gtcttcatcgccctccacgccaacgacgatggcga 158
>ref|XM_463007.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.20 mRNA Length = 2597 Score = 117 bits (59), Expect = 3e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||||||||||| || || |||| ||| ||||||| |||||||| | ||| | ||| Sbjct: 277 ttccagtgcgtgggaatactgtacggggacatcgggacatcgccgctgttcgtgtactcg 336 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| |||||| |||||||| | ||| ||| ||| |||| |||| ||||||||||||| Sbjct: 337 agcacgttcaaggacggcgtccgccacccggatgacctgctcggcgccctctccctcatc 396 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||||||||| ||||||| |||| |||||| | |||||||||| ||| ||||||| Sbjct: 397 atctacagcttcgccctcttcaccatcgtcaagtacgtcttcatcgccctccgcgccaac 456 Query: 468 gacgacggcga 478 ||||||||||| Sbjct: 457 gacgacggcga 467
>dbj|AK068853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169G11, full insert sequence Length = 2831 Score = 117 bits (59), Expect = 3e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||||||||||| || || |||| ||| ||||||| |||||||| | ||| | ||| Sbjct: 319 ttccagtgcgtgggaatactgtacggggacatcgggacatcgccgctgttcgtgtactcg 378 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| |||||| |||||||| | ||| ||| ||| |||| |||| ||||||||||||| Sbjct: 379 agcacgttcaaggacggcgtccgccacccggatgacctgctcggcgccctctccctcatc 438 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||||||||| ||||||| |||| |||||| | |||||||||| ||| ||||||| Sbjct: 439 atctacagcttcgccctcttcaccatcgtcaagtacgtcttcatcgccctccgcgccaac 498 Query: 468 gacgacggcga 478 ||||||||||| Sbjct: 499 gacgacggcga 509
>ref|XM_476356.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2373 Score = 109 bits (55), Expect = 8e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 273 acgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgggacgtcgccg 332 |||||||| |||| ||||||||| | ||| ||||||||| |||| |||| || || || Sbjct: 184 acgctgcgtctggccttccagtgcttcggcgtcctctacggcgacatcggcacctcccca 243 Query: 333 ctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggc 392 |||||||||| ||||| ||||||| | |||| || | ||| |||||| | || ||| Sbjct: 244 ctctacgtctactccaccaccttcgacggcggcatccgccacaccgacgacctcctcggc 303 Query: 393 gtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagatcatcttcatc 452 |||||||||||||||||||||||||||||||||||| |||| ||||| | ||| |||| Sbjct: 304 gtcctctccctcatcatctacagcttcctcctcttcaccatcatcaagtacgtctacatc 363 Query: 453 gcgctctacgccaacgacgacgg 475 || ||| ||||||||||||||| Sbjct: 364 gccctccgcgccaacgacgacgg 386
>ref|XM_476357.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3153 Score = 109 bits (55), Expect = 8e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 273 acgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgggacgtcgccg 332 |||||||| |||| ||||||||| | ||| ||||||||| |||| |||| || || || Sbjct: 308 acgctgcgtctggccttccagtgcttcggcgtcctctacggcgacatcggcacctcccca 367 Query: 333 ctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggc 392 |||||||||| ||||| ||||||| | |||| || | ||| |||||| | || ||| Sbjct: 368 ctctacgtctactccaccaccttcgacggcggcatccgccacaccgacgacctcctcggc 427 Query: 393 gtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagatcatcttcatc 452 |||||||||||||||||||||||||||||||||||| |||| ||||| | ||| |||| Sbjct: 428 gtcctctccctcatcatctacagcttcctcctcttcaccatcatcaagtacgtctacatc 487 Query: 453 gcgctctacgccaacgacgacgg 475 || ||| ||||||||||||||| Sbjct: 488 gccctccgcgccaacgacgacgg 510
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 109 bits (55), Expect = 8e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 273 acgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgggacgtcgccg 332 |||||||| |||| ||||||||| | ||| ||||||||| |||| |||| || || || Sbjct: 121561 acgctgcgtctggccttccagtgcttcggcgtcctctacggcgacatcggcacctcccca 121620 Query: 333 ctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggc 392 |||||||||| ||||| ||||||| | |||| || | ||| |||||| | || ||| Sbjct: 121621 ctctacgtctactccaccaccttcgacggcggcatccgccacaccgacgacctcctcggc 121680 Query: 393 gtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagatcatcttcatc 452 |||||||||||||||||||||||||||||||||||| |||| ||||| | ||| |||| Sbjct: 121681 gtcctctccctcatcatctacagcttcctcctcttcaccatcatcaagtacgtctacatc 121740 Query: 453 gcgctctacgccaacgacgacgg 475 || ||| ||||||||||||||| Sbjct: 121741 gccctccgcgccaacgacgacgg 121763
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 109 bits (55), Expect = 8e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 273 acgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgggacgtcgccg 332 |||||||| |||| ||||||||| | ||| ||||||||| |||| |||| || || || Sbjct: 120860 acgctgcgtctggccttccagtgcttcggcgtcctctacggcgacatcggcacctcccca 120919 Query: 333 ctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggc 392 |||||||||| ||||| ||||||| | |||| || | ||| |||||| | || ||| Sbjct: 120920 ctctacgtctactccaccaccttcgacggcggcatccgccacaccgacgacctcctcggc 120979 Query: 393 gtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagatcatcttcatc 452 |||||||||||||||||||||||||||||||||||| |||| ||||| | ||| |||| Sbjct: 120980 gtcctctccctcatcatctacagcttcctcctcttcaccatcatcaagtacgtctacatc 121039 Query: 453 gcgctctacgccaacgacgacgg 475 || ||| ||||||||||||||| Sbjct: 121040 gccctccgcgccaacgacgacgg 121062
>dbj|AK099800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097P15, full insert sequence Length = 2921 Score = 109 bits (55), Expect = 8e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 273 acgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgggacgtcgccg 332 |||||||| |||| ||||||||| | ||| ||||||||| |||| |||| || || || Sbjct: 275 acgctgcgtctggccttccagtgcttcggcgtcctctacggcgacatcggcacctcccca 334 Query: 333 ctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggc 392 |||||||||| ||||| ||||||| | |||| || | ||| |||||| | || ||| Sbjct: 335 ctctacgtctactccaccaccttcgacggcggcatccgccacaccgacgacctcctcggc 394 Query: 393 gtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagatcatcttcatc 452 |||||||||||||||||||||||||||||||||||| |||| ||||| | ||| |||| Sbjct: 395 gtcctctccctcatcatctacagcttcctcctcttcaccatcatcaagtacgtctacatc 454 Query: 453 gcgctctacgccaacgacgacgg 475 || ||| ||||||||||||||| Sbjct: 455 gccctccgcgccaacgacgacgg 477
>dbj|AK066544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069I08, full insert sequence Length = 3153 Score = 109 bits (55), Expect = 8e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 273 acgctgcggctgggattccagtgcgtgggcatcctctacgccgacctcgggacgtcgccg 332 |||||||| |||| ||||||||| | ||| ||||||||| |||| |||| || || || Sbjct: 308 acgctgcgtctggccttccagtgcttcggcgtcctctacggcgacatcggcacctcccca 367 Query: 333 ctctacgtcttctccaacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggc 392 |||||||||| ||||| ||||||| | |||| || | ||| |||||| | || ||| Sbjct: 368 ctctacgtctactccaccaccttcgacggcggcatccgccacaccgacgacctcctcggc 427 Query: 393 gtcctctccctcatcatctacagcttcctcctcttcgccatggtcaagatcatcttcatc 452 |||||||||||||||||||||||||||||||||||| |||| ||||| | ||| |||| Sbjct: 428 gtcctctccctcatcatctacagcttcctcctcttcaccatcatcaagtacgtctacatc 487 Query: 453 gcgctctacgccaacgacgacgg 475 || ||| ||||||||||||||| Sbjct: 488 gccctccgcgccaacgacgacgg 510
>ref|XM_465985.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2795 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 319 tcgggacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgagg 378 |||||||||||||||| ||||||| ||||| ||| ||| | |||||||| |||| || Sbjct: 494 tcgggacgtcgccgctgtacgtctactccagcacgttcccggacggcgtcaagcacccgg 553 Query: 379 acgacgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtca 438 ||||| | | ||||||||||||||||| |||||| | || ||||| || ||||||||| Sbjct: 554 acgacctcgtcggcgtcctctccctcatgctctacaccctcatcctcatccccatggtca 613 Query: 439 agatcatcttcatcgcgctctacgccaacgacgacggcga 478 || | ||||||||| ||||||||||||||| ||||||| Sbjct: 614 agtacgtcttcatcgtcctctacgccaacgacaacggcga 653
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 319 tcgggacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgagg 378 |||||||||||||||| ||||||| ||||| ||| ||| | |||||||| |||| || Sbjct: 18897207 tcgggacgtcgccgctgtacgtctactccagcacgttcccggacggcgtcaagcacccgg 18897148 Query: 379 acgacgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtca 438 ||||| | | ||||||||||||||||| |||||| | || ||||| || ||||||||| Sbjct: 18897147 acgacctcgtcggcgtcctctccctcatgctctacaccctcatcctcatccccatggtca 18897088 Query: 439 agatcatcttcatcgcgctctacgccaacgacgacggcga 478 || | ||||||||| ||||||||||||||| ||||||| Sbjct: 18897087 agtacgtcttcatcgtcctctacgccaacgacaacggcga 18897048 Score = 83.8 bits (42), Expect = 5e-13 Identities = 132/162 (81%) Strand = Plus / Minus Query: 309 tacgccgacctcgggacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtc 368 |||| |||| |||||||||||||||| ||||||| ||||| ||| || | ||||| || Sbjct: 18867805 tacggcgacgtcgggacgtcgccgctgtacgtctactccagcacgtttccgaacggcatc 18867746 Query: 369 gggcacgaggacgacgtgctgggcgtcctctccctcatcatctacagcttcctcctcttc 428 |||| ||||||| | | |||||||||||||||||| |||||| | || ||||| || Sbjct: 18867745 aagcacccggacgacctcgtcggcgtcctctccctcatcctctacaccctcatcctcatc 18867686 Query: 429 gccatggtcaagatcatcttcatcgcgctctacgccaacgac 470 ||||||||||| | ||||||||| ||||||||||||||| Sbjct: 18867685 cccatggtcaagtacgtcttcatcgtcctctacgccaacgac 18867644 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 391 gcgtcctctccctcatcatctacagcttcctcctcttcgccat 433 ||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 15456136 gcgtcatctccctcatcatctacagcttcctcctcttcaccat 15456094
>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461D06 Length = 112895 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 319 tcgggacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgagg 378 |||||||||||||||| ||||||| ||||| ||| ||| | |||||||| |||| || Sbjct: 60740 tcgggacgtcgccgctgtacgtctactccagcacgttcccggacggcgtcaagcacccgg 60681 Query: 379 acgacgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtca 438 ||||| | | ||||||||||||||||| |||||| | || ||||| || ||||||||| Sbjct: 60680 acgacctcgtcggcgtcctctccctcatgctctacaccctcatcctcatccccatggtca 60621 Query: 439 agatcatcttcatcgcgctctacgccaacgacgacggcga 478 || | ||||||||| ||||||||||||||| ||||||| Sbjct: 60620 agtacgtcttcatcgtcctctacgccaacgacaacggcga 60581 Score = 83.8 bits (42), Expect = 5e-13 Identities = 132/162 (81%) Strand = Plus / Minus Query: 309 tacgccgacctcgggacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtc 368 |||| |||| |||||||||||||||| ||||||| ||||| ||| || | ||||| || Sbjct: 31338 tacggcgacgtcgggacgtcgccgctgtacgtctactccagcacgtttccgaacggcatc 31279 Query: 369 gggcacgaggacgacgtgctgggcgtcctctccctcatcatctacagcttcctcctcttc 428 |||| ||||||| | | |||||||||||||||||| |||||| | || ||||| || Sbjct: 31278 aagcacccggacgacctcgtcggcgtcctctccctcatcctctacaccctcatcctcatc 31219 Query: 429 gccatggtcaagatcatcttcatcgcgctctacgccaacgac 470 ||||||||||| | ||||||||| ||||||||||||||| Sbjct: 31218 cccatggtcaagtacgtcttcatcgtcctctacgccaacgac 31177
>dbj|AK119325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-A11, full insert sequence Length = 2795 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 319 tcgggacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggcacgagg 378 |||||||||||||||| ||||||| ||||| ||| ||| | |||||||| |||| || Sbjct: 494 tcgggacgtcgccgctgtacgtctactccagcacgttcccggacggcgtcaagcacccgg 553 Query: 379 acgacgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccatggtca 438 ||||| | | ||||||||||||||||| |||||| | || ||||| || ||||||||| Sbjct: 554 acgacctcgtcggcgtcctctccctcatgctctacaccctcatcctcatccccatggtca 613 Query: 439 agatcatcttcatcgcgctctacgccaacgacgacggcga 478 || | ||||||||| ||||||||||||||| ||||||| Sbjct: 614 agtacgtcttcatcgtcctctacgccaacgacaacggcga 653
>ref|XM_472368.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2406 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| ||||||||||| |||||| |||| |||| ||||||||||| ||||||| |||| Sbjct: 178 ttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactcc 237 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| ||| | ||||| |||| ||| |||||| | | |||||||||||||||||| Sbjct: 238 agcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatc 297 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || || ||||| ||||| | ||||||||| |||||||||||| Sbjct: 298 ctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaac 357 Query: 468 gac 470 ||| Sbjct: 358 gac 360
>gb|AY324878.1| Oryza sativa (japonica cultivar-group) KUP1 mRNA, complete cds Length = 2655 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| ||||||||||| |||||| |||| |||| ||||||||||| ||||||| |||| Sbjct: 230 ttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactcc 289 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| ||| | ||||| |||| ||| |||||| | | |||||||||||||||||| Sbjct: 290 agcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatc 349 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || || ||||| ||||| | ||||||||| |||||||||||| Sbjct: 350 ctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaac 409 Query: 468 gac 470 ||| Sbjct: 410 gac 412
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08, complete sequence Length = 106975 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| ||||||||||| |||||| |||| |||| ||||||||||| ||||||| |||| Sbjct: 51786 ttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactcc 51845 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| ||| | ||||| |||| ||| |||||| | | |||||||||||||||||| Sbjct: 51846 agcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatc 51905 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || || ||||| ||||| | ||||||||| |||||||||||| Sbjct: 51906 ctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaac 51965 Query: 468 gac 470 ||| Sbjct: 51966 gac 51968
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| ||||||||||| |||||| |||| |||| ||||||||||| ||||||| |||| Sbjct: 19896978 ttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactcc 19897037 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| ||| | ||||| |||| ||| |||||| | | |||||||||||||||||| Sbjct: 19897038 agcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatc 19897097 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || || ||||| ||||| | ||||||||| |||||||||||| Sbjct: 19897098 ctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaac 19897157 Query: 468 gac 470 ||| Sbjct: 19897158 gac 19897160
>dbj|AK119891.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-A07, full insert sequence Length = 2931 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| ||||||||||| |||||| |||| |||| ||||||||||| ||||||| |||| Sbjct: 457 ttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactcc 516 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| ||| | ||||| |||| ||| |||||| | | |||||||||||||||||| Sbjct: 517 agcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatc 576 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || || ||||| ||||| | ||||||||| |||||||||||| Sbjct: 577 ctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaac 636 Query: 468 gac 470 ||| Sbjct: 637 gac 639
>dbj|AK119883.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-G11, full insert sequence Length = 2932 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| ||||||||||| |||||| |||| |||| ||||||||||| ||||||| |||| Sbjct: 459 ttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactcc 518 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| ||| | ||||| |||| ||| |||||| | | |||||||||||||||||| Sbjct: 519 agcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatc 578 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || || ||||| ||||| | ||||||||| |||||||||||| Sbjct: 579 ctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaac 638 Query: 468 gac 470 ||| Sbjct: 639 gac 641
>emb|AJ427970.1|OSA427970 Oryza sativa partial mRNA for putative potassium transporter (HAK1 gene) Length = 2304 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| ||||||||||| |||||| |||| |||| ||||||||||| ||||||| |||| Sbjct: 103 ttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactcc 162 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| ||| | ||||| |||| ||| |||||| | | |||||||||||||||||| Sbjct: 163 agcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatc 222 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || || ||||| ||||| | ||||||||| |||||||||||| Sbjct: 223 ctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaac 282 Query: 468 gac 470 ||| Sbjct: 283 gac 285
>emb|AJ297888.1|HVU297888 Hordeum vulgare partial mRNA for putative potassium transporter (hak1 gene) Length = 766 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| |||| |||||| |||||| |||| |||||||||||||||||||||||| |||| Sbjct: 20 ttccagagcgttggcatcatctacggcgacatcgggacgtcgccgctctacgtctactcc 79 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | |||||| | | ||| || || || ||||||| | |||||||||||||| |||||| Sbjct: 80 agtaccttcccggatggcatcaggaacagggacgacctcctgggcgtcctctcgctcatc 139 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || | ||||| ||||| | |||| |||| ||||||||||||| Sbjct: 140 ctctacaccctcatcatcatacccatgctcaagtacgtctttatcgtgctctacgccaac 199 Query: 468 gac 470 ||| Sbjct: 200 gac 202
>emb|AJ297886.1|HVU297886 Hordeum vulgare partial putative hak1 gene for potassium transporter, exons 1-5 Length = 1205 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| |||| |||||| |||||| |||| |||||||||||||||||||||||| |||| Sbjct: 251 ttccagagcgttggcatcatctacggcgacatcgggacgtcgccgctctacgtctactcc 310 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | |||||| | | ||| || || || ||||||| | |||||||||||||| |||||| Sbjct: 311 agtaccttcccggatggcatcaggaacagggacgacctcctgggcgtcctctcgctcatc 370 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || | ||||| ||||| | |||| |||| ||||||||||||| Sbjct: 371 ctctacaccctcatcatcatacccatgctcaagtacgtctttatcgtgctctacgccaac 430 Query: 468 gac 470 ||| Sbjct: 431 gac 433
>dbj|AK101722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061B08, full insert sequence Length = 2930 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| ||||||||||| |||||| |||| |||| ||||||||||| ||||||| |||| Sbjct: 458 ttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactcc 517 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| ||| | ||||| |||| ||| |||||| | | |||||||||||||||||| Sbjct: 518 agcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatc 577 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || || ||||| ||||| | ||||||||| |||||||||||| Sbjct: 578 ctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaac 637 Query: 468 gac 470 ||| Sbjct: 638 gac 640
>dbj|AK100669.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112J06, full insert sequence Length = 2937 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| ||||||||||| |||||| |||| |||| ||||||||||| ||||||| |||| Sbjct: 483 ttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactcc 542 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | ||| ||| | ||||| |||| ||| |||||| | | |||||||||||||||||| Sbjct: 543 agcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatc 602 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || || ||||| ||||| | ||||||||| |||||||||||| Sbjct: 603 ctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaac 662 Query: 468 gac 470 ||| Sbjct: 663 gac 665
>gb|AF025292.1|AF025292 Hordeum vulgare putative high-affinity potassium transporter (HvHAK1) mRNA, complete cds Length = 2730 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| |||| |||||| |||||| |||| |||||||||||||||||||||||| |||| Sbjct: 232 ttccagagcgttggcatcatctacggcgacatcgggacgtcgccgctctacgtctactcc 291 Query: 348 aacaccttcaagtacggcgtcgggcacgaggacgacgtgctgggcgtcctctccctcatc 407 | |||||| | | ||| || | || ||||||| | |||||||||||||| |||||| Sbjct: 292 agtaccttcccggatggcatcaagaacagggacgacctcctgggcgtcctctcgctcatc 351 Query: 408 atctacagcttcctcctcttcgccatggtcaagatcatcttcatcgcgctctacgccaac 467 |||||| | || || || | ||||| ||||| | ||||||||| ||||||||||||| Sbjct: 352 ctctacaccctcatcatcatacccatgctcaagtacgtcttcatcgtgctctacgccaac 411 Query: 468 gac 470 ||| Sbjct: 412 gac 414
>ref|XM_465982.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2581 Score = 83.8 bits (42), Expect = 5e-13 Identities = 132/162 (81%) Strand = Plus / Plus Query: 309 tacgccgacctcgggacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtc 368 |||| |||| |||||||||||||||| ||||||| ||||| ||| || | ||||| || Sbjct: 376 tacggcgacgtcgggacgtcgccgctgtacgtctactccagcacgtttccgaacggcatc 435 Query: 369 gggcacgaggacgacgtgctgggcgtcctctccctcatcatctacagcttcctcctcttc 428 |||| ||||||| | | |||||||||||||||||| |||||| | || ||||| || Sbjct: 436 aagcacccggacgacctcgtcggcgtcctctccctcatcctctacaccctcatcctcatc 495 Query: 429 gccatggtcaagatcatcttcatcgcgctctacgccaacgac 470 ||||||||||| | ||||||||| ||||||||||||||| Sbjct: 496 cccatggtcaagtacgtcttcatcgtcctctacgccaacgac 537
>dbj|AK106353.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A02, full insert sequence Length = 2581 Score = 83.8 bits (42), Expect = 5e-13 Identities = 132/162 (81%) Strand = Plus / Plus Query: 309 tacgccgacctcgggacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtc 368 |||| |||| |||||||||||||||| ||||||| ||||| ||| || | ||||| || Sbjct: 376 tacggcgacgtcgggacgtcgccgctgtacgtctactccagcacgtttccgaacggcatc 435 Query: 369 gggcacgaggacgacgtgctgggcgtcctctccctcatcatctacagcttcctcctcttc 428 |||| ||||||| | | |||||||||||||||||| |||||| | || ||||| || Sbjct: 436 aagcacccggacgacctcgtcggcgtcctctccctcatcctctacaccctcatcctcatc 495 Query: 429 gccatggtcaagatcatcttcatcgcgctctacgccaacgac 470 ||||||||||| | ||||||||| ||||||||||||||| Sbjct: 496 cccatggtcaagtacgtcttcatcgtcctctacgccaacgac 537
>dbj|AP005650.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078K05 Length = 162901 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 391 gcgtcctctccctcatcatctacagcttcctcctcttcgccat 433 ||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 126918 gcgtcatctccctcatcatctacagcttcctcctcttcaccat 126876
>ref|XM_463017.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.10 mRNA Length = 2400 Score = 65.9 bits (33), Expect = 1e-07 Identities = 159/201 (79%) Strand = Plus / Plus Query: 254 acaggacaactgggtgaggacgctgcggctgggattccagtgcgtgggcatcctctacgc 313 |||||| | ||||| ||||||| || | |||| |||||||||||||| ||||| |||| Sbjct: 141 acaggatagctgggggaggacgatgagtctggcgttccagtgcgtggggatcctgtacgg 200 Query: 314 cgacctcgggacgtcgccgctctacgtcttctccaacaccttcaagtacggcgtcgggca 373 |||| | ||||||||| || | ||||||| ||||| ||| || || ||||| | ||||| Sbjct: 201 cgacattgggacgtcgtcgttgtacgtctactccagcacttttgagcacggcattgggca 260 Query: 374 cgaggacgacgtgctgggcgtcctctccctcatcatctacagcttcctcctcttcgccat 433 | || ||||| | || || |||||||||||| ||||||||||| | |||||| || | Sbjct: 261 ccccgatgacgtcgtcggggtgctctccctcatcgtctacagcttcatgctcttcaccgt 320 Query: 434 ggtcaagatcatcttcatcgc 454 |||||||| ||||| |||| Sbjct: 321 catcaagatcgtcttcgtcgc 341
>dbj|AB055632.1| Phragmites australis e-PhaHAK1B mRNA for high-affinity potassium transporter, complete cds Length = 2478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| |||| |||||| |||||| ||| ||||||||||||||||||| |||| |||| Sbjct: 191 ttccagagcgtcggcatcatctacggtgacatcgggacgtcgccgctctatgtctactcc 250 Query: 348 aacaccttc 356 | ||||||| Sbjct: 251 agcaccttc 259
>dbj|AB055631.1| Phragmites australis e-PhaHAK1A mRNA for high-affinity potassium transporter, complete cds Length = 2465 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| |||| |||||| |||||| ||| ||||||||||||||||||| |||| |||| Sbjct: 191 ttccagagcgtcggcatcatctacggtgacatcgggacgtcgccgctctatgtctactcc 250 Query: 348 aacaccttc 356 | ||||||| Sbjct: 251 agcaccttc 259
>dbj|AB055630.1| Phragmites australis n-PhaHAK1 mRNA for high-affinity potassium transporter, complete cds Length = 2478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| |||| |||||| |||||| ||| ||||||||||||||||||| |||| |||| Sbjct: 191 ttccagagcgtcggcatcatctacggtgacatcgggacgtcgccgctctatgtctactcc 250 Query: 348 aacaccttc 356 | ||||||| Sbjct: 251 agcaccttc 259
>dbj|AB055629.1| Phragmites australis u-PhaHAK1 mRNA for high-affinity potassium transporter, complete cds Length = 2477 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 288 ttccagtgcgtgggcatcctctacgccgacctcgggacgtcgccgctctacgtcttctcc 347 |||||| |||| |||||| |||||| ||| ||||||||||||||||||| |||| |||| Sbjct: 191 ttccagagcgtcggcatcatctacggtgacatcgggacgtcgccgctctatgtctactcc 250 Query: 348 aacaccttc 356 | ||||||| Sbjct: 251 agcaccttc 259
>ref|NM_190030.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1953 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 298 tgggcatcctctacgccgacctcgggacgtcgccgctctacgt 340 |||||||| | |||| ||||||||||||||||||||| ||||| Sbjct: 248 tgggcatcgtgtacggcgacctcgggacgtcgccgctgtacgt 290
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 298 tgggcatcctctacgccgacctcgggacgtcgccgctctacgt 340 |||||||| | |||| ||||||||||||||||||||| ||||| Sbjct: 40899343 tgggcatcgtgtacggcgacctcgggacgtcgccgctgtacgt 40899301 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 219 gacgccaccaggcccgcccacggc 242 |||||||||||||| ||||||||| Sbjct: 15875454 gacgccaccaggccggcccacggc 15875431
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 298 tgggcatcctctacgccgacctcgggacgtcgccgctctacgt 340 |||||||| | |||| ||||||||||||||||||||| ||||| Sbjct: 111449 tgggcatcgtgtacggcgacctcgggacgtcgccgctgtacgt 111407
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 298 tgggcatcctctacgccgacctcgggacgtcgccgctctacgt 340 |||||||| | |||| ||||||||||||||||||||| ||||| Sbjct: 27768 tgggcatcgtgtacggcgacctcgggacgtcgccgctgtacgt 27726
>dbj|AK107477.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B10, full insert sequence Length = 2410 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 298 tgggcatcctctacgccgacctcgggacgtcgccgctctacgt 340 |||||||| | |||| ||||||||||||||||||||| ||||| Sbjct: 348 tgggcatcgtgtacggcgacctcgggacgtcgccgctgtacgt 390
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 163 gcggcgacgtcgaggtgccgccg 185 ||||||||||||||||||||||| Sbjct: 130920 gcggcgacgtcgaggtgccgccg 130942
>gb|U73214.1|TAU73214 Triticum aestivum cold acclimation protein WCOR518 (Wcor518) mRNA, parial cds Length = 1168 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 108 agatcgatggcgatgggcagcgcgagg 134 ||||||||||||||||||||| ||||| Sbjct: 894 agatcgatggcgatgggcagcacgagg 868
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 cagcctggagatcgtgccgcac 158 |||||||||||||||||||||| Sbjct: 113072 cagcctggagatcgtgccgcac 113093 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 gcggcggcgacgtcgaggtgc 180 ||||||||||||||||||||| Sbjct: 275718 gcggcggcgacgtcgaggtgc 275738
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 ccctcatcatctacagcttcctcctcttc 428 ||||||||||| || |||||||||||||| Sbjct: 838350 ccctcatcatccacggcttcctcctcttc 838378
>gb|AC159446.1| Trypanosoma brucei chromosome 3 clone RPCI93-3K10, complete sequence Length = 91751 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 ccctcatcatctacagcttcctcctcttc 428 ||||||||||| || |||||||||||||| Sbjct: 44796 ccctcatcatccacggcttcctcctcttc 44824
>ref|XM_819620.1| Trypanosoma brucei TREU927 clone RPCI93-3K10 hypothetical protein (Tb927.3.3260) partial mRNA Length = 969 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 400 ccctcatcatctacagcttcctcctcttc 428 ||||||||||| || |||||||||||||| Sbjct: 305 ccctcatcatccacggcttcctcctcttc 277
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 cgccggcggacgtgccgcggc 201 ||||||||||||||||||||| Sbjct: 4776425 cgccggcggacgtgccgcggc 4776445 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 193 tgccgcggcaggactcgctctaccgcgac 221 |||||| |||| ||||||||||||||||| Sbjct: 3548864 tgccgcagcagtactcgctctaccgcgac 3548892
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 gccgctctacgtcttctccaacacc 353 ||||||||||| ||||||||||||| Sbjct: 5346689 gccgctctacgccttctccaacacc 5346713 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cggcggcgacgtcgaggtgc 180 |||||||||||||||||||| Sbjct: 6769060 cggcggcgacgtcgaggtgc 6769079
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11, complete sequence Length = 115808 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cggcggcgacgtcgaggtgc 180 |||||||||||||||||||| Sbjct: 3963 cggcggcgacgtcgaggtgc 3982
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cggcggcgacgtcgaggtgc 180 |||||||||||||||||||| Sbjct: 136441 cggcggcgacgtcgaggtgc 136460
>ref|XM_483290.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2731 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 315 gacctcgggacgtcgccgctctacgtcttctc 346 ||||| |||||||||||||| ||||| ||||| Sbjct: 327 gacctggggacgtcgccgctgtacgtgttctc 358
>ref|XM_475799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cggcggcgacgtcgaggtgc 180 |||||||||||||||||||| Sbjct: 473 cggcggcgacgtcgaggtgc 454
>gb|AF000262.1| Caenorhabditis elegans cosmid C48E7, complete sequence Length = 37701 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 401 cctcatcatctacagcttcctcctcttc 428 ||||||||||| || ||||||||||||| Sbjct: 19576 cctcatcatcttcatcttcctcctcttc 19549
>gb|AY442363.1| Vinciguerria sp. JAL-2003 recombination-activating gene 1 (RAG1) gene, partial cds Length = 1440 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 tctccaacaccttcaagtac 362 |||||||||||||||||||| Sbjct: 1250 tctccaacaccttcaagtac 1269
>ref|XM_362951.1| Magnaporthe grisea 70-15 hypothetical protein (MG08486.4) partial cds Length = 1824 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcgggcacgaggacgacgt 385 |||||||||||||||||||| Sbjct: 1191 gtcgggcacgaggacgacgt 1172
>gb|AC027655.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-318M11, complete sequence Length = 104804 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ggctgtgctgtggaggagag 109 |||||||||||||||||||| Sbjct: 17431 ggctgtgctgtggaggagag 17450
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 gcatcctctacgccgacctcggga 324 |||||||| ||||||||||||||| Sbjct: 807245 gcatcctcgacgccgacctcggga 807268
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gcggcggcgacgtcgaggtg 179 |||||||||||||||||||| Sbjct: 104286 gcggcggcgacgtcgaggtg 104305
>ref|XM_543571.2| PREDICTED: Canis familiaris similar to RIM binding protein 2 (RIM-BP2) (LOC486445), mRNA Length = 5211 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gagcagcctggagatcgtgc 153 |||||||||||||||||||| Sbjct: 1999 gagcagcctggagatcgtgc 1980
>gb|AF461089.1| Homo sapiens chondroitin sulfate proteoglycan 5-III (CSPG5) mRNA, complete cds Length = 4161 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cgatgggcagcgcgaggagc 137 |||||||||||||||||||| Sbjct: 1997 cgatgggcagcgcgaggagc 1978
>gb|AF461087.1| Homo sapiens chondroitin sulfate proteoglycan 5-I (CSPG5) mRNA, complete cds Length = 4080 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cgatgggcagcgcgaggagc 137 |||||||||||||||||||| Sbjct: 1997 cgatgggcagcgcgaggagc 1978
>ref|XM_539202.2| PREDICTED: Canis familiaris hypothetical LOC482081 (LOC482081), mRNA Length = 3981 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 acgaggacgacgtgctgggc 392 |||||||||||||||||||| Sbjct: 2339 acgaggacgacgtgctgggc 2358
>ref|XM_812924.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053508837.34) partial mRNA Length = 8514 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 acgccgacctcgggacgtcg 329 |||||||||||||||||||| Sbjct: 6227 acgccgacctcgggacgtcg 6246
>gb|BC014709.1| Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 7, mRNA (cDNA clone MGC:25257 IMAGE:4482816), complete cds Length = 2168 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 cttcctcctcttcgccatggtcaa 439 |||||| ||||||||||||||||| Sbjct: 240 cttccttctcttcgccatggtcaa 263
>gb|AC164433.4| Mus musculus BAC clone RP23-357G5 from chromosome 14, complete sequence Length = 190748 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 cttcctcctcttcgccatggtcaa 439 |||||| ||||||||||||||||| Sbjct: 174415 cttccttctcttcgccatggtcaa 174438
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 agatcgtgccgcacagcggcggcg 168 ||||||||||| |||||||||||| Sbjct: 939946 agatcgtgccggacagcggcggcg 939923
>gb|AC010538.9| Homo sapiens chromosome 16 clone RP11-368I7, complete sequence Length = 210031 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 ctgggtgaggacgctgcggctggg 286 ||||||||||||| |||||||||| Sbjct: 136708 ctgggtgaggacgttgcggctggg 136685
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 gcacagcggcggcgacgtcg 174 |||||||||||||||||||| Sbjct: 1225264 gcacagcggcggcgacgtcg 1225283
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cgtcgggcacgaggacgacg 384 |||||||||||||||||||| Sbjct: 1638694 cgtcgggcacgaggacgacg 1638675
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 cgaggacgacgtgctgggcgtcct 397 |||||||| ||||||||||||||| Sbjct: 116891 cgaggacggcgtgctgggcgtcct 116868
>emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BAC clone F8L15 (ESSA project) Length = 125411 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cagagcaaaaagcagcagat 43 |||||||||||||||||||| Sbjct: 65392 cagagcaaaaagcagcagat 65373
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 gcccgcccacggcggccacc 249 |||||||||||||||||||| Sbjct: 1613372 gcccgcccacggcggccacc 1613353
>tpg|BK000880.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M286, complete sequence Length = 10835 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 219 gacgccaccaggcccgcccacggc 242 |||||||||||||| ||||||||| Sbjct: 5451 gacgccaccaggccggcccacggc 5428
>ref|NM_141850.2| Drosophila melanogaster CG14718-RA (CG14718), mRNA Length = 2107 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 tcgggcacgaggacgacgtgctgg 390 ||||||| |||||||||||||||| Sbjct: 487 tcgggcatgaggacgacgtgctgg 464
>dbj|AK150950.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830018K11 product:solute carrier family 7 (cationic amino acid transporter, y+ system), member 7, full insert sequence Length = 2281 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 cttcctcctcttcgccatggtcaa 439 |||||| ||||||||||||||||| Sbjct: 391 cttccttctcttcgccatggtcaa 414
>dbj|AK151718.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830035D10 product:solute carrier family 7 (cationic amino acid transporter, y+ system), member 7, full insert sequence Length = 2281 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 cttcctcctcttcgccatggtcaa 439 |||||| ||||||||||||||||| Sbjct: 391 cttccttctcttcgccatggtcaa 414
>dbj|AK152637.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830081J23 product:solute carrier family 7 (cationic amino acid transporter, y+ system), member 7, full insert sequence Length = 2047 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 cttcctcctcttcgccatggtcaa 439 |||||| ||||||||||||||||| Sbjct: 157 cttccttctcttcgccatggtcaa 180
>dbj|AK170851.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630204K11 product:solute carrier family 7 (cationic amino acid transporter, y+ system), member 7, full insert sequence Length = 2053 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 cttcctcctcttcgccatggtcaa 439 |||||| ||||||||||||||||| Sbjct: 163 cttccttctcttcgccatggtcaa 186
>gb|AY051469.1| Drosophila melanogaster GH13594 full length cDNA Length = 2092 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 tcgggcacgaggacgacgtgctgg 390 ||||||| |||||||||||||||| Sbjct: 453 tcgggcatgaggacgacgtgctgg 430
>ref|NM_059405.3| Caenorhabditis elegans LiPid Depleted family member (lpd-2) (lpd-2) mRNA, complete cds Length = 994 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 401 cctcatcatctacagcttcctcctcttc 428 ||||||||||| || ||||||||||||| Sbjct: 448 cctcatcatcttcatcttcctcctcttc 421
>gb|AF361796.1|AF361796 Homo sapiens serine/cysteine proteinase inhibitor clade A member 5 (SERPINA5) gene, complete cds Length = 8145 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ctgtgctgtggaggagagat 111 |||||||||||||||||||| Sbjct: 7552 ctgtgctgtggaggagagat 7571
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 315 gacctcgggacgtcgccgctctacgtcttctc 346 ||||| |||||||||||||| ||||| ||||| Sbjct: 25306769 gacctggggacgtcgccgctgtacgtgttctc 25306800
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cggcggcgacgtcgaggtgc 180 |||||||||||||||||||| Sbjct: 26622966 cggcggcgacgtcgaggtgc 26622985
>gb|AC007805.5|AC007805 Drosophila melanogaster, chromosome 3R, region 86F-86F, BAC clone BACR11G22, complete sequence Length = 170324 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 tcgggcacgaggacgacgtgctgg 390 ||||||| |||||||||||||||| Sbjct: 74524 tcgggcatgaggacgacgtgctgg 74501
>dbj|AP003536.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1096D03 Length = 184422 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 219 gacgccaccaggcccgcccacggc 242 |||||||||||||| ||||||||| Sbjct: 103123 gacgccaccaggccggcccacggc 103100
>gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176910 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cgatgggcagcgcgaggagc 137 |||||||||||||||||||| Sbjct: 114994 cgatgggcagcgcgaggagc 115013
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 taccgcgacgccaccaggcccgcc 236 ||||||||||||| |||||||||| Sbjct: 312864 taccgcgacgccaacaggcccgcc 312887
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gtacggcgtcgggcacgagg 378 |||||||||||||||||||| Sbjct: 2663840 gtacggcgtcgggcacgagg 2663821
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 315 gacctcgggacgtcgccgctctacgtcttctc 346 ||||| |||||||||||||| ||||| ||||| Sbjct: 81954 gacctggggacgtcgccgctgtacgtgttctc 81985
>dbj|AK119438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-B04, full insert sequence Length = 2579 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cggcggcgacgtcgaggtgc 180 |||||||||||||||||||| Sbjct: 1378 cggcggcgacgtcgaggtgc 1359
>emb|AJ331687.1|HSA331687 Homo sapiens genomic sequence surrounding NotI site, clone NR5-GA11C Length = 746 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cgatgggcagcgcgaggagc 137 |||||||||||||||||||| Sbjct: 18 cgatgggcagcgcgaggagc 37
>emb|AJ323029.1|HSA323029 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NJ3C Length = 616 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cgatgggcagcgcgaggagc 137 |||||||||||||||||||| Sbjct: 18 cgatgggcagcgcgaggagc 37
>dbj|AK072472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119J10, full insert sequence Length = 2731 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 315 gacctcgggacgtcgccgctctacgtcttctc 346 ||||| |||||||||||||| ||||| ||||| Sbjct: 327 gacctggggacgtcgccgctgtacgtgttctc 358
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 cgacgtcgaggtgccgccggcgga 190 ||||||||||||| |||||||||| Sbjct: 947509 cgacgtcgaggtgacgccggcgga 947486
>gb|AE003692.3| Drosophila melanogaster chromosome 3R, section 30 of 118 of the complete sequence Length = 227847 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 tcgggcacgaggacgacgtgctgg 390 ||||||| |||||||||||||||| Sbjct: 177804 tcgggcatgaggacgacgtgctgg 177781
>emb|AL049839.3|CNS0000J Human chromosome 14 DNA sequence BAC R-986E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 214527 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ctgtgctgtggaggagagat 111 |||||||||||||||||||| Sbjct: 38501 ctgtgctgtggaggagagat 38520
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 gcccgcccacggcggccacc 249 |||||||||||||||||||| Sbjct: 1631201 gcccgcccacggcggccacc 1631182
>emb|AL831756.8| Mouse DNA sequence from clone RP23-300P20 on chromosome 4, complete sequence Length = 164883 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 tctccctcatcatctacagcttcc 420 ||||||||||||||| |||||||| Sbjct: 29752 tctccctcatcatcttcagcttcc 29775
>gb|AC130474.12| Mus musculus chromosome 7, clone RP23-178C20, complete sequence Length = 232792 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tcagagcaaaaagcagcaga 42 |||||||||||||||||||| Sbjct: 49024 tcagagcaaaaagcagcaga 49043
>ref|NM_011405.1| Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 (Slc7a7), mRNA Length = 2144 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 cttcctcctcttcgccatggtcaa 439 |||||| ||||||||||||||||| Sbjct: 234 cttccttctcttcgccatggtcaa 257
>gb|AY487528.1| Uncultured organism clone 4A1 nitrilase (BD5257) gene, complete cds Length = 915 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 catcctctacgccgacctcg 321 |||||||||||||||||||| Sbjct: 792 catcctctacgccgacctcg 811
>emb|AJ130943.1|MMU130943 Mus musculus mRNA for glycoprotein-associated amino acid transporter y+LAT1b Length = 2144 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 cttcctcctcttcgccatggtcaa 439 |||||| ||||||||||||||||| Sbjct: 234 cttccttctcttcgccatggtcaa 257
>emb|AJ012754.1|MMU012754 Mus musculus mRNA for glycoprotein-associated amino acid transporter y+LAT1a Length = 2158 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 cttcctcctcttcgccatggtcaa 439 |||||| ||||||||||||||||| Sbjct: 242 cttccttctcttcgccatggtcaa 265
>gb|AC130472.2| Homo sapiens chromosome 3 clone RP11-395P16, complete sequence Length = 194160 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cgatgggcagcgcgaggagc 137 |||||||||||||||||||| Sbjct: 10544 cgatgggcagcgcgaggagc 10563
>gb|M68516.1|HUMPCI Human protein C inhibitor gene, complete cds Length = 15571 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ctgtgctgtggaggagagat 111 |||||||||||||||||||| Sbjct: 13949 ctgtgctgtggaggagagat 13968 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,641,116 Number of Sequences: 3902068 Number of extensions: 3641116 Number of successful extensions: 83180 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81606 Number of HSP's gapped (non-prelim): 1549 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
