ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl19b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 60 3e-07
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 60 3e-07
3gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome... 60 3e-07
4dbj|AK067479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 3e-07
5dbj|AK119809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-05
6gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 44 0.020
7gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 0.31
8gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 0.31
9emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 40 0.31
10gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 38 1.2
11gb|DQ153061.1| Uncultured bacterium clone FhcDML-4 formyltransfe... 38 1.2
12gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 38 1.2
13emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 38 1.2
14gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 38 1.2
15gb|DQ058415.1| Rhizobium etli strain 8C-3 plasmid clone REB01, p... 36 4.9
16ref|XM_450643.1| Oryza sativa (japonica cultivar-group), mRNA 36 4.9
17gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 36 4.9
18gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 36 4.9
19emb|AJ508937.1|PFR508937 Propionibacterium freudenreichii subsp.... 36 4.9
20gb|AE008785.1| Salmonella typhimurium LT2, section 89 of 220 of ... 36 4.9
21emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 36 4.9
22emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 36 4.9
23emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 36 4.9
24emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 36 4.9
25emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 36 4.9
26emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g... 36 4.9
27emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genom... 36 4.9
28emb|AJ536756.1|ROX536756 Ralstonia oxalatica transposon Tn4371 36 4.9
29dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 36 4.9
30dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 36 4.9
31gb|AE005817.1| Caulobacter crescentus CB15 section 143 of 359 of... 36 4.9
32gb|AE011917.1| Xanthomonas axonopodis pv. citri str. 306, secti... 36 4.9
33gb|AE011731.1| Xanthomonas axonopodis pv. citri str. 306, secti... 36 4.9
34gb|U80928.5|REU80928 Rhizobium etli strain CFN42 symbiotic plasm... 36 4.9
35gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 36 4.9
36gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 36 4.9
37dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 36 4.9
38gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 36 4.9
39dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 36 4.9
40dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic D... 36 4.9
41emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 36 4.9
42gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 36 4.9
43gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 36 4.9
44gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 36 4.9
45gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 36 4.9
46gb|AF010189.1|AF010189 Pseudomonas stutzeri HflC (hflC) gene, pa... 36 4.9
47gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 36 4.9 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 3e-07
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                         
Query: 1       cgaccaccgcgcgctggtcatcgacggcgtgcgccgggtgct 42
               ||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 8172529 cgaccaccgcgcggtggtcatcgacggcgtgcgacgcgtgct 8172488
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 3e-07
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                         
Query: 1       cgaccaccgcgcgctggtcatcgacggcgtgcgccgggtgct 42
               ||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 8170364 cgaccaccgcgcggtggtcatcgacggcgtgcgacgcgtgct 8170323
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>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12,
              complete sequence
          Length = 195583

 Score = 60.0 bits (30), Expect = 3e-07
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                        
Query: 1      cgaccaccgcgcgctggtcatcgacggcgtgcgccgggtgct 42
              ||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 103959 cgaccaccgcgcggtggtcatcgacggcgtgcgacgcgtgct 103918
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>dbj|AK067479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107M10, full
           insert sequence
          Length = 3250

 Score = 60.0 bits (30), Expect = 3e-07
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 1   cgaccaccgcgcgctggtcatcgacggcgtgcgccgggtgct 42
           ||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 407 cgaccaccgcgcggtggtcatcgacggcgtgcgacgcgtgct 448
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>dbj|AK119809.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H02, full
            insert sequence
          Length = 3078

 Score = 52.0 bits (26), Expect = 8e-05
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 1    cgaccaccgcgcgctggtcatcgacggcgtgcgccgggtgct 42
            ||||||||||||  ||||||||||||||||||| || |||||
Sbjct: 2439 cgaccaccgcgctgtggtcatcgacggcgtgcgacgcgtgct 2480
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 44.1 bits (22), Expect = 0.020
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 8       cgcgcgctggtcatcgacggcg 29
               ||||||||||||||||||||||
Sbjct: 4040440 cgcgcgctggtcatcgacggcg 4040419



 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 16    ggtcatcgacggcgtgcg 33
             ||||||||||||||||||
Sbjct: 60806 ggtcatcgacggcgtgcg 60823
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 0.31
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      tcatcgacggcgtgcgccgg 37
               ||||||||||||||||||||
Sbjct: 3568980 tcatcgacggcgtgcgccgg 3568961



 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 12      cgctggtcatcgacggcg 29
               ||||||||||||||||||
Sbjct: 1462930 cgctggtcatcgacggcg 1462947
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 0.31
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ggtcatcgacggcgtgcgcc 35
              ||||||||||||||||||||
Sbjct: 528503 ggtcatcgacggcgtgcgcc 528484
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 0.31
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      cgaccaccgcgcgctggtcatcga 24
              ||||||||||||||||||| ||||
Sbjct: 247788 cgaccaccgcgcgctggtcgtcga 247811
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 16      ggtcatcgacggcgtgcgc 34
               |||||||||||||||||||
Sbjct: 2579507 ggtcatcgacggcgtgcgc 2579525



 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 22      cgacggcgtgcgccgggtg 40
               |||||||||||||||||||
Sbjct: 2121400 cgacggcgtgcgccgggtg 2121382
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>gb|DQ153061.1| Uncultured bacterium clone FhcDML-4 formyltransferase/hydrolase
           complex subunit D (fhcD) gene, partial cds
          Length = 552

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  ggtcatcgacggcgtgcgc 34
           |||||||||||||||||||
Sbjct: 204 ggtcatcgacggcgtgcgc 222
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 17      gtcatcgacggcgtgcgcc 35
               |||||||||||||||||||
Sbjct: 1840613 gtcatcgacggcgtgcgcc 1840631
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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     catcgacggcgtgcgccgg 37
              |||||||||||||||||||
Sbjct: 154422 catcgacggcgtgcgccgg 154404
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     caccgcgcgctggtcatcg 23
             |||||||||||||||||||
Sbjct: 60411 caccgcgcgctggtcatcg 60393
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>gb|DQ058415.1| Rhizobium etli strain 8C-3 plasmid clone REB01, partial sequence
          Length = 118287

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 5     caccgcgcgctggtcatc 22
             ||||||||||||||||||
Sbjct: 41720 caccgcgcgctggtcatc 41703
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>ref|XM_450643.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1731

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 24   acggcgtgcgccgggtgc 41
            ||||||||||||||||||
Sbjct: 1094 acggcgtgcgccgggtgc 1077
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 17      gtcatcgacggcgtgcgc 34
               ||||||||||||||||||
Sbjct: 2298461 gtcatcgacggcgtgcgc 2298444
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 14      ctggtcatcgacggcgtg 31
               ||||||||||||||||||
Sbjct: 3277898 ctggtcatcgacggcgtg 3277881



 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 14      ctggtcatcgacggcgtg 31
               ||||||||||||||||||
Sbjct: 1380542 ctggtcatcgacggcgtg 1380559
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>emb|AJ508937.1|PFR508937 Propionibacterium freudenreichii subsp. shermanii acyP gene for
           putative acylphosphatase
          Length = 288

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 7   ccgcgcgctggtcatcgacggc 28
           ||||||||||| ||||||||||
Sbjct: 96  ccgcgcgctgggcatcgacggc 117
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>gb|AE008785.1| Salmonella typhimurium LT2, section 89 of 220 of the complete genome
          Length = 24096

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 12   cgctggtcatcgacggcg 29
            ||||||||||||||||||
Sbjct: 3481 cgctggtcatcgacggcg 3498
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 25     cggcgtgcgccgggtgct 42
              ||||||||||||||||||
Sbjct: 347749 cggcgtgcgccgggtgct 347766
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    gtcatcgacggcgtgcgc 34
             ||||||||||||||||||
Sbjct: 39360 gtcatcgacggcgtgcgc 39377
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     gtcatcgacggcgtgcgc 34
              ||||||||||||||||||
Sbjct: 303238 gtcatcgacggcgtgcgc 303255
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 25     cggcgtgcgccgggtgct 42
              ||||||||||||||||||
Sbjct: 255583 cggcgtgcgccgggtgct 255600
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>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     gtcatcgacggcgtgcgc 34
              ||||||||||||||||||
Sbjct: 274300 gtcatcgacggcgtgcgc 274317
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>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 25     cggcgtgcgccgggtgct 42
              ||||||||||||||||||
Sbjct: 122859 cggcgtgcgccgggtgct 122876
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>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16
          Length = 349841

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 9      gcgcgctggtcatcgacg 26
              ||||||||||||||||||
Sbjct: 116356 gcgcgctggtcatcgacg 116373
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>emb|AJ536756.1|ROX536756 Ralstonia oxalatica transposon Tn4371
          Length = 54657

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 14    ctggtcatcgacggcgtg 31
             ||||||||||||||||||
Sbjct: 27782 ctggtcatcgacggcgtg 27799
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 15      tggtcatcgacggcgtgcgccg 36
               ||||||||||||||| ||||||
Sbjct: 1641527 tggtcatcgacggcgagcgccg 1641548
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 18      tcatcgacggcgtgcgcc 35
               ||||||||||||||||||
Sbjct: 3952143 tcatcgacggcgtgcgcc 3952160
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>gb|AE005817.1| Caulobacter crescentus CB15 section 143 of 359 of the complete genome
          Length = 14256

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 23   gacggcgtgcgccgggtg 40
            ||||||||||||||||||
Sbjct: 5296 gacggcgtgcgccgggtg 5313
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>gb|AE011917.1| Xanthomonas axonopodis pv. citri str. 306,  section 295 of 469 of
           the complete genome
          Length = 11013

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 11  gcgctggtcatcgacggcgtgc 32
           |||||||||| |||||||||||
Sbjct: 581 gcgctggtcaccgacggcgtgc 560
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>gb|AE011731.1| Xanthomonas axonopodis pv. citri str. 306,  section 109 of 469 of the
            complete genome
          Length = 10029

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 18   tcatcgacggcgtgcgcc 35
            ||||||||||||||||||
Sbjct: 4054 tcatcgacggcgtgcgcc 4037
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>gb|U80928.5|REU80928 Rhizobium etli strain CFN42 symbiotic plasmid p42d, complete sequence
          Length = 371254

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 5      caccgcgcgctggtcatc 22
              ||||||||||||||||||
Sbjct: 286734 caccgcgcgctggtcatc 286751
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 2       gaccaccgcgcgctggtc 19
               ||||||||||||||||||
Sbjct: 2555090 gaccaccgcgcgctggtc 2555107
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 20      atcgacggcgtgcgccgg 37
               ||||||||||||||||||
Sbjct: 3405991 atcgacggcgtgcgccgg 3405974
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 24       acggcgtgcgccgggtgc 41
                ||||||||||||||||||
Sbjct: 11977166 acggcgtgcgccgggtgc 11977183
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 22      cgacggcgtgcgccgggt 39
               ||||||||||||||||||
Sbjct: 1414794 cgacggcgtgcgccgggt 1414777
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 17      gtcatcgacggcgtgcgc 34
               ||||||||||||||||||
Sbjct: 2370072 gtcatcgacggcgtgcgc 2370089
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>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0441A12
          Length = 185437

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 24    acggcgtgcgccgggtgc 41
             ||||||||||||||||||
Sbjct: 81646 acggcgtgcgccgggtgc 81663
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 14      ctggtcatcgacggcgtg 31
               ||||||||||||||||||
Sbjct: 2805304 ctggtcatcgacggcgtg 2805287
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 12      cgctggtcatcgacggcg 29
               ||||||||||||||||||
Sbjct: 2023075 cgctggtcatcgacggcg 2023092
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 18      tcatcgacggcgtgcgcc 35
               ||||||||||||||||||
Sbjct: 3954430 tcatcgacggcgtgcgcc 3954447
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 25     cggcgtgcgccgggtgct 42
              ||||||||||||||||||
Sbjct: 532034 cggcgtgcgccgggtgct 532051
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 18      tcatcgacggcgtgcgcc 35
               ||||||||||||||||||
Sbjct: 1787486 tcatcgacggcgtgcgcc 1787503
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>gb|AF010189.1|AF010189 Pseudomonas stutzeri HflC (hflC) gene, partial cds; HisX (hisX) gene,
            complete cds; and PurA (purA) gene, partial cds
          Length = 2180

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 12   cgctggtcatcgacggcg 29
            ||||||||||||||||||
Sbjct: 1786 cgctggtcatcgacggcg 1803
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>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 36.2 bits (18), Expect = 4.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 14      ctggtcatcgacggcgtg 31
               ||||||||||||||||||
Sbjct: 1998392 ctggtcatcgacggcgtg 1998409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 158,704
Number of Sequences: 3902068
Number of extensions: 158704
Number of successful extensions: 46051
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42204
Number of HSP's gapped (non-prelim): 3847
length of query: 42
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 22
effective length of database: 17,155,003,908
effective search space: 377410085976
effective search space used: 377410085976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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