Clone Name | bastl19b10 |
---|---|
Clone Library Name | barley_pub |
>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 877 Score = 99.4 bits (246), Expect = 3e-21 Identities = 47/51 (92%), Positives = 48/51 (94%) Frame = +2 Query: 278 VQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPAS 430 VQRL + ASLETDSRLRVRITDADHPRWEVPQDIIPRPAP DVLHDAPPAS Sbjct: 60 VQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPRPAPGDVLHDAPPAS 110
>AGLU_SPIOL (O04893) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 903 Score = 58.2 bits (139), Expect = 8e-09 Identities = 26/43 (60%), Positives = 33/43 (76%) Frame = +2 Query: 269 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAP 397 GP +Q L +TASLE++ RLRVRITDA H RWE+P +I+ R P Sbjct: 69 GPDIQLLSITASLESNDRLRVRITDAKHRRWEIPDNILHRHQP 111
>AGLU_BETVU (O04931) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 913 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/43 (51%), Positives = 30/43 (69%) Frame = +2 Query: 269 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAP 397 GP + L TAS E D LR+R TDA++ RWE+P +++PRP P Sbjct: 74 GPDIHFLSFTASFEEDDTLRIRFTDANNRRWEIPNEVLPRPPP 116
>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)| Length = 915 Score = 52.4 bits (124), Expect = 5e-07 Identities = 25/46 (54%), Positives = 29/46 (63%) Frame = +2 Query: 269 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADV 406 G + LRL ETDSRLRV ITDA RWEVP +++PR P V Sbjct: 62 GSDITTLRLFVKHETDSRLRVHITDAKQQRWEVPYNLLPREQPPQV 107
>SUIS_RAT (P23739) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1840 Score = 36.6 bits (83), Expect = 0.026 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +2 Query: 251 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPA---PADVLHD 415 P+ G ++ + LT +T +R R +ITD ++ R+EVP + AD L+D Sbjct: 143 PSPTLFGEDIKSVILTTQTQTGNRFRFKITDPNNKRYEVPHQFVKEETGIPAADTLYD 200
>SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1826 Score = 35.8 bits (81), Expect = 0.044 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = +2 Query: 269 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPR---PAPADVLHD 415 G + + LT +T +RLR ++TD ++ R+EVP + PA + L+D Sbjct: 139 GNDINNVLLTTESQTANRLRFKLTDPNNKRYEVPHQFVTEFAGPAATETLYD 190
>SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1826 Score = 35.0 bits (79), Expect = 0.075 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Frame = +2 Query: 251 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPR---PAPADVLHDAP 421 P+ G + + T +T +R R +ITD ++ R+EVP + P +D L+D Sbjct: 133 PSPTLFGNDINSVLFTTQNQTPNRFRFKITDPNNRRYEVPHQYVKEFTGPTVSDTLYDVK 192 Query: 422 PA 427 A Sbjct: 193 VA 194
>SUIS_SUNMU (O62653) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1812 Score = 34.3 bits (77), Expect = 0.13 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = +2 Query: 269 GPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPAS 430 G + L LT +T +R R +ITD ++ R+EVP + + PPAS Sbjct: 124 GDNITNLLLTTQSQTANRFRFKITDPNNQRYEVPHQFVNKD------FSGPPAS 171
>MGA_HUMAN (O43451) Maltase-glucoamylase, intestinal [Includes: Maltase (EC| 3.2.1.20) (Alpha-glucosidase); Glucoamylase (EC 3.2.1.3) (Glucan 1,4-alpha-glucosidase)] Length = 1856 Score = 33.5 bits (75), Expect = 0.22 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +2 Query: 251 PADAALGPGVQRLRLTASLETDSRLRVRITDADHPRWEVPQD 376 P+ G V + LTA +T +R ++TD + R+EVP + Sbjct: 158 PSSPVFGSNVDNVLLTAEYQTSNRFHFKLTDQTNNRFEVPHE 199
>LYAG_MOUSE (P70699) Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid| maltase) Length = 953 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/48 (43%), Positives = 26/48 (54%) Frame = +2 Query: 278 VQRLRLTASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAP 421 V L+L +ETDSRL +I D R+EVP + PR VL AP Sbjct: 164 VLTLQLEVLMETDSRLHFKIKDPASKRYEVPLE-TPR-----VLSQAP 205
>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2| Length = 964 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +2 Query: 296 TASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPP 424 T ++ET + RV + D PR E P+ P PAPA +A P Sbjct: 79 TVTVETRKK-RVVVRPDDAPRAEAPKPAEPAPAPAAAPAEAKP 120
>RS4_METBF (Q46GC8) 30S ribosomal protein S4P| Length = 216 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 Query: 361 PSRVVGVGDAHAQPAVRLEACSEAEPLDTRPERRVGRRLAGKR 233 P R V V A L A +EA+ +P R GR+ G+R Sbjct: 174 PERPVQVASVLADSTTTLRAVAEAKQAKEKPPERGGRKRRGRR 216
>CLPB_HAEIN (P44403) Chaperone clpB| Length = 856 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/55 (34%), Positives = 30/55 (54%) Frame = -1 Query: 364 LPSRVVGVGDAHAQPAVRLEACSEAEPLDTRPERRVGRRLAGKRQLQPRRQSAPR 200 LP + + + D A ++R+E S+ EPLD R ERR+ + ++ LQ A R Sbjct: 386 LPDKAIDLID-EAASSIRMEIDSKPEPLD-RLERRIIQLKLEQQALQKEEDEASR 438
>LYAG_HUMAN (P10253) Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid| maltase) (Aglucosidase alfa) [Contains: 76 kDa lysosomal alpha-glucosidase; 70 kDa lysosomal alpha-glucosidase] Length = 952 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 287 LRLTASLETDSRLRVRITDADHPRWEVP 370 LRL +ET++RL I D + R+EVP Sbjct: 167 LRLDVMMETENRLHFTIKDPANRRYEVP 194
>HEBP2_MOUSE (Q9WU63) Heme-binding protein 2 (Protein SOUL)| Length = 205 Score = 28.1 bits (61), Expect = 9.2 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +2 Query: 353 PRWEVPQDIIPRPAPADVLHDAP 421 P W+ P+DI P+P ++ H P Sbjct: 23 PSWKAPEDIDPQPGSYEIRHYGP 45 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,848,372 Number of Sequences: 219361 Number of extensions: 492026 Number of successful extensions: 2109 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2037 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2109 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)