Clone Name | bastl19a12 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_420603.1| PREDICTED: Gallus gallus similar to sodium bicarbonate cotransporter (LOC422649), mRNA Length = 4408 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 gagaaggcggcgtcagaggagaag 24 ||||||||||||||| |||||||| Sbjct: 121 gagaaggcggcgtcataggagaag 144
>ref|XM_754826.1| Ustilago maydis 521 hypothetical protein (UM03772.1) partial mRNA Length = 1662 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aagctgcttgacgacaagga 41 |||||||||||||||||||| Sbjct: 1393 aagctgcttgacgacaagga 1412
>gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, complete sequence Length = 198295 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 gacaaggagctagagctaga 53 |||||||||||||||||||| Sbjct: 124623 gacaaggagctagagctaga 124642
>dbj|AP000478.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-14E22, complete sequence Length = 121689 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 aggagctagagctagagcgggagc 61 |||||||||||||||||| ||||| Sbjct: 48973 aggagctagagctagagcaggagc 48996
>dbj|AP001978.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-258O13, complete sequence Length = 161602 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 aggagctagagctagagcgggagc 61 |||||||||||||||||| ||||| Sbjct: 153278 aggagctagagctagagcaggagc 153301
>ref|XM_785458.1| PREDICTED: Strongylocentrotus purpuratus similar to WD repeat domain 6 (LOC585638), mRNA Length = 2337 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 ggagaagctgcttgacgac 36 ||||||||||||||||||| Sbjct: 1263 ggagaagctgcttgacgac 1281
>emb|BX571660.1| Wolinella succinogenes, complete genome; segment 4/7 Length = 349926 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 aggagctagagctagagcg 56 ||||||||||||||||||| Sbjct: 76344 aggagctagagctagagcg 76326
>emb|AJ512686.1|WSU512686 Wolinella succinogenes nap gene cluster (napAGHBFLD genes), wrbA gene (partial) and ORF1 DNA (partial) Length = 7497 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 aggagctagagctagagcg 56 ||||||||||||||||||| Sbjct: 7144 aggagctagagctagagcg 7162
>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence Length = 253733 Score = 38.2 bits (19), Expect = 6.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 aaggagctagagctagagc 55 ||||||||||||||||||| Sbjct: 96150 aaggagctagagctagagc 96168 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 595,610 Number of Sequences: 3902068 Number of extensions: 595610 Number of successful extensions: 34358 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 34346 Number of HSP's gapped (non-prelim): 12 length of query: 139 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 118 effective length of database: 17,151,101,840 effective search space: 2023830017120 effective search space used: 2023830017120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)