Clone Name | bastl19a11 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK122110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127H20, full insert sequence Length = 2754 Score = 93.7 bits (47), Expect = 5e-16 Identities = 182/227 (80%) Strand = Plus / Plus Query: 267 gccaccgagtggttcttggtttcttttcaaccgaagggtgcatcgcttcttccggaatga 326 ||||||||||||| ||||||||||||||||||| || || | ||| | |||| | ||||| Sbjct: 344 gccaccgagtggtgcttggtttcttttcaaccgtagagttcttcggtacttcagaaatga 403 Query: 327 tgggtatgtgtggcagaaaaagaaaaatgggaagagcggcaacgaatcccatgagtacct 386 |||||||| |||| |||||||| |||||||||| ||| |||||||| ||| Sbjct: 404 tgggtatgaatggcgaaaaaagaagaatgggaagactattgctgaagcccatgagcgcct 463 Query: 387 taaggttgataatgtaaaggctctgaattgctactatgctcgtgcagaaaataatcctag 446 ||||||||||||||| | || ||||||||||||||||| | ||||| || || ||| Sbjct: 464 taaggttgataatgttgatgcactgaattgctactatgcacacgcagacaaaaactctac 523 Query: 447 acccatgaggcggatatattggatgcttgaaccggcttatgagcaca 493 | |||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 524 atttcagaggcgtatatattggatgcttgatccggcttatgatcaca 570
>dbj|AK068932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002D02, full insert sequence Length = 3165 Score = 93.7 bits (47), Expect = 5e-16 Identities = 182/227 (80%) Strand = Plus / Plus Query: 267 gccaccgagtggttcttggtttcttttcaaccgaagggtgcatcgcttcttccggaatga 326 ||||||||||||| ||||||||||||||||||| || || | ||| | |||| | ||||| Sbjct: 323 gccaccgagtggtgcttggtttcttttcaaccgtagagttcttcggtacttcagaaatga 382 Query: 327 tgggtatgtgtggcagaaaaagaaaaatgggaagagcggcaacgaatcccatgagtacct 386 |||||||| |||| |||||||| |||||||||| ||| |||||||| ||| Sbjct: 383 tgggtatgaatggcgaaaaaagaagaatgggaagactattgctgaagcccatgagcgcct 442 Query: 387 taaggttgataatgtaaaggctctgaattgctactatgctcgtgcagaaaataatcctag 446 ||||||||||||||| | || ||||||||||||||||| | ||||| || || ||| Sbjct: 443 taaggttgataatgttgatgcactgaattgctactatgcacacgcagacaaaaactctac 502 Query: 447 acccatgaggcggatatattggatgcttgaaccggcttatgagcaca 493 | |||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 503 atttcagaggcgtatatattggatgcttgatccggcttatgatcaca 549
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 275 gtggttcttggtttcttttcaaccgaagggtgcatcgcttcttccggaatgatgggtatg 334 ||||| ||||||||||||||||||| || || | ||| | |||| | ||||||||||||| Sbjct: 40390693 gtggtgcttggtttcttttcaaccgtagagttcttcggtacttcagaaatgatgggtatg 40390752 Query: 335 tgtggcagaaaaagaaaaatgggaaga 361 |||| |||||||| |||||||||| Sbjct: 40390753 aatggcgaaaaaagaagaatgggaaga 40390779 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 389 aggttgataatgtaaaggctctgaattgctactatgc 425 ||||||||||||| | || ||||||||||||||||| Sbjct: 40391105 aggttgataatgttgatgcactgaattgctactatgc 40391141 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 gaggcggatatattggatgcttga 476 |||||| ||||||||||||||||| Sbjct: 40391169 gaggcgtatatattggatgcttga 40391192 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 22868282 gcagcggcagcagcagcaag 22868263
>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1455F06 Length = 140848 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 275 gtggttcttggtttcttttcaaccgaagggtgcatcgcttcttccggaatgatgggtatg 334 ||||| ||||||||||||||||||| || || | ||| | |||| | ||||||||||||| Sbjct: 99657 gtggtgcttggtttcttttcaaccgtagagttcttcggtacttcagaaatgatgggtatg 99716 Query: 335 tgtggcagaaaaagaaaaatgggaaga 361 |||| |||||||| |||||||||| Sbjct: 99717 aatggcgaaaaaagaagaatgggaaga 99743 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 389 aggttgataatgtaaaggctctgaattgctactatgc 425 ||||||||||||| | || ||||||||||||||||| Sbjct: 100069 aggttgataatgttgatgcactgaattgctactatgc 100105 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 gaggcggatatattggatgcttga 476 |||||| ||||||||||||||||| Sbjct: 100133 gaggcgtatatattggatgcttga 100156
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0592G05 Length = 146220 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 275 gtggttcttggtttcttttcaaccgaagggtgcatcgcttcttccggaatgatgggtatg 334 ||||| ||||||||||||||||||| || || | ||| | |||| | ||||||||||||| Sbjct: 41934 gtggtgcttggtttcttttcaaccgtagagttcttcggtacttcagaaatgatgggtatg 41993 Query: 335 tgtggcagaaaaagaaaaatgggaaga 361 |||| |||||||| |||||||||| Sbjct: 41994 aatggcgaaaaaagaagaatgggaaga 42020 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 389 aggttgataatgtaaaggctctgaattgctactatgc 425 ||||||||||||| | || ||||||||||||||||| Sbjct: 42346 aggttgataatgttgatgcactgaattgctactatgc 42382 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 gaggcggatatattggatgcttga 476 |||||| ||||||||||||||||| Sbjct: 42410 gaggcgtatatattggatgcttga 42433
>emb|AL162456.14| Human DNA sequence from clone RP11-95C14 on chromosome 13 Contains part of the GPC5 gene for glypican 5, complete sequence Length = 165100 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 341 agaaaaagaaaaatgggaagag 362 |||||||||||||||||||||| Sbjct: 31599 agaaaaagaaaaatgggaagag 31578
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 ctcgtcctcgtcctcggtggcg 43 |||||||||||||||||||||| Sbjct: 1961164 ctcgtcctcgtcctcggtggcg 1961143
>gb|AY190948.1| Drosophila pseudoobscura clone DPSF01_06_H12 (D1436) genomic sequence Length = 43025 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 cgatgcagcggcagcagcagca 146 |||||||||||||||||||||| Sbjct: 13012 cgatgcagcggcagcagcagca 12991
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaaggtctcg 154 ||||||||| |||||||||||||||| Sbjct: 2738193 gcagcggcaccagcagcaaggtctcg 2738218
>gb|AC007103.4|AC007103 Homo sapiens chromosome 4 clone C0190D22 map 4p16, complete sequence Length = 181571 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 335 tgtggcagaaaaagaaaaatgggaag 360 |||||||||||||||||| ||||||| Sbjct: 19513 tgtggcagaaaaagaaaattgggaag 19538
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 agaaaaagaaaaatgggaaga 361 ||||||||||||||||||||| Sbjct: 962712 agaaaaagaaaaatgggaaga 962692
>gb|AC113585.4| Trypanosoma brucei chromosome 5 clone RPCI93-27M3, complete sequence Length = 127380 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 agaaaaagaaaaatgggaaga 361 ||||||||||||||||||||| Sbjct: 4713 agaaaaagaaaaatgggaaga 4693
>gb|AC149694.2| Bos taurus BAC CH240-423C21 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 186118 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaagg 149 ||||||||||||||||||||| Sbjct: 135306 gcagcggcagcagcagcaagg 135326
>gb|AY394000.1| Rhodococcus sp. TK6 phosphotriesterase (pte) gene, partial cds; acyl-CoA synthetase (acs), short chain dehydrogenase (scd), transport gene (tpg), and cyclohexanol dehydrogenase (chnA) genes, complete cds Length = 5965 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 ggtggcgcctgcggatattcagtgc 61 |||||||||| |||||||||||||| Sbjct: 2984 ggtggcgccttcggatattcagtgc 3008
>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete sequence Length = 155911 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 ggacgcggtggctcaagccca 202 ||||||||||||||||||||| Sbjct: 76210 ggacgcggtggctcaagccca 76230
>ref|XM_541885.2| PREDICTED: Canis familiaris similar to bassoon (LOC484769), mRNA Length = 11766 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 cagcggcagcagcagcaaggtctcg 154 |||| |||||||||||||||||||| Sbjct: 11317 cagcagcagcagcagcaaggtctcg 11341
>ref|XM_568532.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNN00960) partial mRNA Length = 900 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gatgcagcggcagcagcagca 146 ||||||||||||||||||||| Sbjct: 13 gatgcagcggcagcagcagca 33
>emb|AL359195.24| Human DNA sequence from clone RP11-36D19 on chromosome 10 Contains part of a pseudogene similar to nuclear pore complex interacting proteins (NPIP), a eukaryotic translation initiation factor 5A (EIF5A) pseudogene, the MAT1A gene for methionine adenosyltransferase I alpha, a novel zinc finger protein pseudogene, three novel genes, the 5' end of the gene for a novel protein (MGC4248) and three CpG islands, complete sequence Length = 171148 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 agaaaaagaaaaatgggaaga 361 ||||||||||||||||||||| Sbjct: 145887 agaaaaagaaaaatgggaaga 145867
>emb|AL132822.15|HSJ1017F8 Human DNA sequence from clone RP5-1017F8 on chromosome 20 Contains a novel gene, part of a novel gene (LOC284757) and a CpG island, complete sequence Length = 118873 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaagg 149 ||||||||||||||||||||| Sbjct: 9821 gcagcggcagcagcagcaagg 9801
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 gagttcgtcgaggccggcgcg 126 ||||||||||||||||||||| Sbjct: 267429 gagttcgtcgaggccggcgcg 267449
>emb|AL021839.1|SPBC19G7 S.pombe chromosome II cosmid c19G7 Length = 37727 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 cagcagcagcaaggtctcgac 156 ||||||||||||||||||||| Sbjct: 36055 cagcagcagcaaggtctcgac 36035
>gb|AC113337.2| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0061H20, from chromosome 10, complete sequence Length = 135876 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 cgatgcagcggcagcagcagcaagg 149 ||||||||| ||||||||||||||| Sbjct: 66504 cgatgcagcagcagcagcagcaagg 66528
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaagg 149 ||||||||||||||||||||| Sbjct: 1286609 gcagcggcagcagcagcaagg 1286629
>gb|AC163750.4| Pan troglodytes BAC clone CH251-295N9 from chromosome unknown, complete sequence Length = 182445 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 agaaaaagaaaaatgggaaga 361 ||||||||||||||||||||| Sbjct: 52368 agaaaaagaaaaatgggaaga 52388
>gb|AC090179.4| Homo sapiens chromosome 15, clone RP11-236J21, complete sequence Length = 161586 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaagg 149 ||||||||||||||||||||| Sbjct: 53994 gcagcggcagcagcagcaagg 54014
>ref|NM_001021889.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC19G7.16), partial mRNA Length = 1287 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 cagcagcagcaaggtctcgac 156 ||||||||||||||||||||| Sbjct: 1051 cagcagcagcaaggtctcgac 1031
>emb|AL929088.23| Mouse DNA sequence from clone RP23-360J2 on chromosome 2, complete sequence Length = 77156 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 atgtgtggcagaaaaagaaaa 352 ||||||||||||||||||||| Sbjct: 66351 atgtgtggcagaaaaagaaaa 66331
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 cgatgcagcggcagcagcagcaagg 149 ||||||||| ||||||||||||||| Sbjct: 4640460 cgatgcagcagcagcagcagcaagg 4640484 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 7810997 gcagcggcagcagcagcaag 7810978
>gb|AC027243.20| Homo sapiens chromosome 15, clone RP11-685G9, complete sequence Length = 195806 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaagg 149 ||||||||||||||||||||| Sbjct: 35335 gcagcggcagcagcagcaagg 35315
>gb|AC137587.2| Homo sapiens 3 BAC RP13-861G15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131999 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 aaaaagaaaaatgggaagagc 363 ||||||||||||||||||||| Sbjct: 98925 aaaaagaaaaatgggaagagc 98945
>ref|XM_321339.2| Anopheles gambiae str. PEST ENSANGP00000012821 (ENSANGG00000010332), partial mRNA Length = 1135 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 gatgcagcggcagcagcagca 146 ||||||||||||||||||||| Sbjct: 230 gatgcagcggcagcagcagca 210
>gb|AC156581.4| Pan troglodytes BAC clone CH251-372H22 from chromosome unknown, complete sequence Length = 188418 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 agaaaaagaaaaatgggaaga 361 ||||||||||||||||||||| Sbjct: 167654 agaaaaagaaaaatgggaaga 167674
>gb|AF091555.1|AF091555 Homo sapiens C-terminal binding protein (CTBP1) mRNA, complete cds Length = 2106 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaaga 361 ||||||||| ||||||||||| ||||||| Sbjct: 1824 tgtgtggcataaaaagaaaaacgggaaga 1796
>dbj|AP006241.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-660I20, complete sequence Length = 171287 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 aaaaagaaaaatgggaagagc 363 ||||||||||||||||||||| Sbjct: 142230 aaaaagaaaaatgggaagagc 142250
>gb|U37408.1|HSU37408 Homo sapiens phosphoprotein CtBP mRNA, complete cds Length = 2109 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaaga 361 ||||||||| ||||||||||| ||||||| Sbjct: 1827 tgtgtggcataaaaagaaaaacgggaaga 1799
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 cgatgcagcggcagcagcagcaagg 149 ||||||||| ||||||||||||||| Sbjct: 4641281 cgatgcagcagcagcagcagcaagg 4641305 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 7816096 gcagcggcagcagcagcaag 7816077
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 cacctcgtcctcgtcctcggtggcgcct 46 ||||||| |||||||||||| ||||||| Sbjct: 578919 cacctcggcctcgtcctcggcggcgcct 578892
>ref|XM_474176.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1251 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 cgatgcagcggcagcagcagcaag 148 ||||||||| |||||||||||||| Sbjct: 1001 cgatgcagcagcagcagcagcaag 1024
>ref|XM_464509.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1561 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaaggtct 152 ||||| |||||||||||||||||| Sbjct: 1346 gcagcagcagcagcagcaaggtct 1369
>ref|NM_195586.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0034E23.23), mRNA Length = 450 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 227 gcagcggcagcagcagcaag 208
>ref|XM_611263.2| PREDICTED: Bos taurus similar to putative integral membrane transport UST1r (LOC508494), mRNA Length = 2566 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gcgatgcagcggcagcagcagcaa 147 |||||||||| ||||||||||||| Sbjct: 2503 gcgatgcagcagcagcagcagcaa 2526
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cacctcacctcgtcctcgtc 33 |||||||||||||||||||| Sbjct: 45380 cacctcacctcgtcctcgtc 45399
>gb|BC070877.1| Rattus norvegicus SH3-domain kinase binding protein 1, mRNA (cDNA clone MGC:91419 IMAGE:7096160), complete cds Length = 3310 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||||||||| |||||||||||| Sbjct: 34 cgcgatgcagcagcagcagcagca 57
>gb|BC111599.1| Homo sapiens tolloid-like 2, mRNA (cDNA clone MGC:133420 IMAGE:40080557), complete cds, with stop codon, in Gateway system Length = 3102 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||| |||||||||||||||||| Sbjct: 94 cgcgaggcagcggcagcagcagca 71
>ref|NM_001012614.1| Homo sapiens C-terminal binding protein 1 (CTBP1), transcript variant 2, mRNA Length = 2483 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaag 360 ||||||||| ||||||||||| |||||| Sbjct: 2143 tgtgtggcataaaaagaaaaacgggaag 2116
>ref|NM_001328.2| Homo sapiens C-terminal binding protein 1 (CTBP1), transcript variant 1, mRNA Length = 2288 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaag 360 ||||||||| ||||||||||| |||||| Sbjct: 1948 tgtgtggcataaaaagaaaaacgggaag 1921
>gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, complete sequence Length = 221860 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gacatacaaaggctgcagca 173 |||||||||||||||||||| Sbjct: 109473 gacatacaaaggctgcagca 109454
>ref|XM_453563.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D11264g predicted mRNA Length = 2040 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 457 gcagcggcagcagcagcaag 476
>ref|NM_012465.2| Homo sapiens tolloid-like 2 (TLL2), mRNA Length = 6753 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||| |||||||||||||||||| Sbjct: 290 cgcgaggcagcggcagcagcagca 267
>gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0058G18, complete sequence Length = 175397 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgcagcggcagcagcagcaa 147 |||||||||||||||||||| Sbjct: 58130 tgcagcggcagcagcagcaa 58111
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cacctcacctcgtcctcgtc 33 |||||||||||||||||||| Sbjct: 27259015 cacctcacctcgtcctcgtc 27258996
>ref|XM_382259.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02083.1) partial mRNA Length = 1971 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atgcagcggcagcagcagca 146 |||||||||||||||||||| Sbjct: 1747 atgcagcggcagcagcagca 1766
>gb|BC030548.1| Homo sapiens tolloid-like 2, mRNA (cDNA clone IMAGE:5182610), containing frame-shift errors Length = 2041 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||| |||||||||||||||||| Sbjct: 289 cgcgaggcagcggcagcagcagca 266
>ref|XM_544559.2| PREDICTED: Canis familiaris similar to Carboxypeptidase N subunit 2 precursor (Carboxypeptidase N polypeptide 2) (Carboxypeptidase N 83 kDa chain) (Carboxypeptidase N regulatory subunit) (Carboxypeptidase N large subunit) (LOC487434), mRNA Length = 642 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctcgtcctcgtcctcggtg 40 |||||||||||||||||||| Sbjct: 628 cctcgtcctcgtcctcggtg 609
>ref|XM_544444.2| PREDICTED: Canis familiaris similar to procollagen, type XVI, alpha 1 (LOC487318), mRNA Length = 4571 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cctcgtcctcgtcctcggtg 40 |||||||||||||||||||| Sbjct: 2878 cctcgtcctcgtcctcggtg 2897
>emb|CR649525.2|CNS0F057 Tetraodon nigroviridis full-length cDNA Length = 1017 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 tgcagcggcagcagcagcaaggtc 151 ||||||||||||||||||| |||| Sbjct: 80 tgcagcggcagcagcagcagggtc 57
>gb|BC013871.2| Homo sapiens tolloid-like 2, mRNA (cDNA clone IMAGE:3836889), partial cds Length = 1980 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||| |||||||||||||||||| Sbjct: 265 cgcgaggcagcggcagcagcagca 242
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tcctcgtcctcggtggcgcc 45 |||||||||||||||||||| Sbjct: 199544 tcctcgtcctcggtggcgcc 199525
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 cggagttcgtcgaggccggcgcga 127 ||||| |||||||||||||||||| Sbjct: 3865925 cggagctcgtcgaggccggcgcga 3865902
>emb|AL158194.16| Human DNA sequence from clone RP11-429E17 on chromosome 13q13.1-14.2 Contains part of the LHFP gene for lipoma HMGIC fusion partner, complete sequence Length = 177019 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 atgtgtggcagaaaaagaaaaatg 355 |||| ||||||||||||||||||| Sbjct: 170476 atgtctggcagaaaaagaaaaatg 170499
>emb|AL138765.18| Human DNA sequence from clone RP11-34E5 on chromosome 10 Contains the SMBP gene for SM-11044 binding protein (SMBP)(EP70-P-iso), the TLL2 gene for tolloid-like 2, a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)(B23, NPM, NUMATRIN) pseudogene, a ribosomal protein S2 (RPS2)(LLREP3) pseudogene, the 3' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)) and two CpG islands, complete sequence Length = 162820 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||| |||||||||||||||||| Sbjct: 24919 cgcgaggcagcggcagcagcagca 24942
>gb|AC112655.4| Homo sapiens X BAC RP11-286G7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114148 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcacctcgtcctcgtcctc 36 |||||||||||||||||||| Sbjct: 104133 ctcacctcgtcctcgtcctc 104114
>gb|AY267682.1| Bigelowiella natans phosphoglycerate kinase 2 mRNA, complete cds; nuclear gene for plastid product Length = 2087 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 325 gcagcggcagcagcagcaag 344
>gb|AF472304.1|F472304S01 Mus musculus Ruk protein (Sh3kbp1) gene, exon 1 Length = 574 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||||||||| |||||||||||| Sbjct: 270 cgcgatgcagcagcagcagcagca 293
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 963652 gcagcggcagcagcagcaag 963633
>gb|BC098400.1| Homo sapiens C-terminal binding protein 1, transcript variant 1, mRNA (cDNA clone MGC:104684 IMAGE:30344174), complete cds Length = 2304 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaag 360 ||||||||| ||||||||||| |||||| Sbjct: 1958 tgtgtggcataaaaagaaaaacgggaag 1931
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cagcaggcggtgaggacgcg 188 |||||||||||||||||||| Sbjct: 94383 cagcaggcggtgaggacgcg 94364
>emb|CR749848.1| Homo sapiens genomic DNA; cDNA DKFZp686G1224 (from clone DKFZp686G1224) Length = 9101 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 atgtgtggcagaaaaagaaaaatg 355 |||| ||||||||||||||||||| Sbjct: 3666 atgtctggcagaaaaagaaaaatg 3643
>emb|CR608612.1| full-length cDNA clone CS0DF027YP13 of Fetal brain of Homo sapiens (human) Length = 360 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaag 360 ||||||||| ||||||||||| |||||| Sbjct: 31 tgtgtggcataaaaagaaaaacgggaag 4
>emb|CR605200.1| full-length cDNA clone CS0DL001YN20 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2076 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaag 360 ||||||||| ||||||||||| |||||| Sbjct: 1750 tgtgtggcataaaaagaaaaacgggaag 1723
>tpg|BK003406.1| TPA: TPA_inf: Drosophila melanogaster HDC02273 (HDC02273) gene, complete cds Length = 372 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 246 gcagcggcagcagcagcaag 265
>gb|DQ378281.1| Drosophila virilis strain Tucson 15010-1001.10 fosmid 26E5, complete sequence Length = 40479 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 atgcagcggcagcagcagca 146 |||||||||||||||||||| Sbjct: 20230 atgcagcggcagcagcagca 20211
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gcgatgcagcggcagcagcagcaa 147 |||||||||||||| ||||||||| Sbjct: 1922778 gcgatgcagcggcatcagcagcaa 1922755
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tcctcgtcctcggtggcgcc 45 |||||||||||||||||||| Sbjct: 870470 tcctcgtcctcggtggcgcc 870489
>emb|BX666062.6| Zebrafish DNA sequence from clone DKEY-99O18 in linkage group 2, complete sequence Length = 233488 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 taccttaaggttgataatgtaaag 405 ||||||||||| |||||||||||| Sbjct: 56661 taccttaaggtagataatgtaaag 56684
>dbj|AK172022.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830031B02 product:SH3-domain kinase binding protein 1, full insert sequence Length = 3395 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||||||||| |||||||||||| Sbjct: 157 cgcgatgcagcagcagcagcagca 180
>gb|AF411694.1|AF411694 Baboon cytomegalovirus B79 (B79), B80 (B80), B82 (B82), B83a (B83a), B83b (B83b), and B84 (B84) genes, complete cds Length = 9946 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgatgcagcggcagcagcag 144 |||||||||||||||||||| Sbjct: 2731 cgatgcagcggcagcagcag 2712
>gb|AC156504.5| Mus musculus 10 BAC RP24-315I19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 208535 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gccattcaagactcacctca 20 |||||||||||||||||||| Sbjct: 23568 gccattcaagactcacctca 23587
>ref|NM_014728.1| Homo sapiens FERM and PDZ domain containing 4 (FRMPD4), mRNA Length = 6352 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcacctcgtcctcgtcctc 36 |||||||||||||||||||| Sbjct: 2770 ctcacctcgtcctcgtcctc 2751
>gb|AC022352.5|AC022352 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0034E23, from chromosome 10, complete sequence Length = 139398 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 116876 gcagcggcagcagcagcaag 116857
>dbj|AK080930.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430213G06 product:SH3-domain kinase binding protein 1, full insert sequence Length = 3537 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||||||||| |||||||||||| Sbjct: 41 cgcgatgcagcagcagcagcagca 64
>dbj|AK049182.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330011K06 product:SH3-domain kinase binding protein 1, full insert sequence Length = 3388 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||||||||| |||||||||||| Sbjct: 177 cgcgatgcagcagcagcagcagca 200
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 cgatgcagcggcagcagcagcaag 148 ||||||||| |||||||||||||| Sbjct: 33525985 cgatgcagcagcagcagcagcaag 33526008 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atgcagcggcagcagcagca 146 |||||||||||||||||||| Sbjct: 21029223 atgcagcggcagcagcagca 21029242
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgcagcggcagcagcagcaa 147 |||||||||||||||||||| Sbjct: 24870016 tgcagcggcagcagcagcaa 24869997
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cacctcacctcgtcctcgtc 33 |||||||||||||||||||| Sbjct: 27350338 cacctcacctcgtcctcgtc 27350319
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaaggtct 152 ||||| |||||||||||||||||| Sbjct: 5609236 gcagcagcagcagcagcaaggtct 5609259
>gb|AC010214.7|AC010214 Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone BACR27F17, complete sequence Length = 174036 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 140633 gcagcggcagcagcagcaag 140614
>gb|AC092535.4| Homo sapiens BAC clone RP11-20I20 from 4, complete sequence Length = 190462 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 tgtgtggcagaaaaagaaaaatgggaag 360 ||||||||| ||||||||||| |||||| Sbjct: 112552 tgtgtggcataaaaagaaaaacgggaag 112579
>gb|AC079120.6| Homo sapiens BAC clone RP11-345M24 from 2, complete sequence Length = 104547 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 tggttcttggtttcttttca 295 |||||||||||||||||||| Sbjct: 16857 tggttcttggtttcttttca 16876
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 71839 gcagcggcagcagcagcaag 71820
>gb|AC011995.8| Homo sapiens BAC clone RP11-163G21 from 2, complete sequence Length = 151605 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 agaaaaagaaaaatgggaag 360 |||||||||||||||||||| Sbjct: 129654 agaaaaagaaaaatgggaag 129635
>gb|AY157155.1| Paromalostomum fusculum 28S large subunit ribosomal RNA gene, partial sequence Length = 3386 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gtggctcaagcccagagagg 208 |||||||||||||||||||| Sbjct: 184 gtggctcaagcccagagagg 203
>ref|XM_240449.3| PREDICTED: Rattus norvegicus G protein-coupled receptor 124 (predicted) (Gpr124_predicted), mRNA Length = 5127 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 187 gcagcggcagcagcagcaag 168
>gb|AC136966.2| Bos taurus clone RP42-221D7, complete sequence Length = 158113 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaaggtct 152 ||||| |||||||||||||||||| Sbjct: 103506 gcagcagcagcagcagcaaggtct 103483
>gb|BC053320.1| Homo sapiens C-terminal binding protein 1, transcript variant 2, mRNA (cDNA clone MGC:59831 IMAGE:6461670), complete cds Length = 2492 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaag 360 ||||||||| ||||||||||| |||||| Sbjct: 2135 tgtgtggcataaaaagaaaaacgggaag 2108
>gb|BC011655.2| Homo sapiens C-terminal binding protein 1, transcript variant 1, mRNA (cDNA clone MGC:12707 IMAGE:4128336), complete cds Length = 2202 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaag 360 ||||||||| ||||||||||| |||||| Sbjct: 1821 tgtgtggcataaaaagaaaaacgggaag 1794
>gb|BC112366.1| Homo sapiens tolloid-like 2, mRNA (cDNA clone MGC:133313 IMAGE:40038726), complete cds Length = 5074 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||| |||||||||||||||||| Sbjct: 188 cgcgaggcagcggcagcagcagca 165
>gb|BC112341.1| Homo sapiens tolloid-like 2, mRNA (cDNA clone MGC:133312 IMAGE:40038720), complete cds Length = 5074 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||| |||||||||||||||||| Sbjct: 188 cgcgaggcagcggcagcagcagca 165
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaaggtct 152 ||||| |||||||||||||||||| Sbjct: 36972 gcagcagcagcagcagcaaggtct 36995
>gb|AC158405.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1366F05, complete sequence Length = 171022 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 115604 gcagcggcagcagcagcaag 115623
>dbj|AK026106.1| Homo sapiens cDNA: FLJ22453 fis, clone HRC09679, highly similar to AF059516 Homo sapiens tolloid-like 2 protein (TLL2) mRNA Length = 1907 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||| |||||||||||||||||| Sbjct: 297 cgcgaggcagcggcagcagcagca 274
>emb|AL442117.1|H0421H08 Oryza sativa genomic DNA, chromosome X, BAC clone: H0421H08, complete sequence Length = 55574 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 cgatgcagcggcagcagcagcaag 148 ||||||||| |||||||||||||| Sbjct: 39515 cgatgcagcagcagcagcagcaag 39538
>dbj|AB023149.2| Homo sapiens mRNA for KIAA0932 protein, partial cds Length = 6717 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||| |||||||||||||||||| Sbjct: 255 cgcgaggcagcggcagcagcagca 232
>dbj|AK068104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129G14, full insert sequence Length = 1791 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 cgatgcagcggcagcagcagcaag 148 ||||||||| |||||||||||||| Sbjct: 1281 cgatgcagcagcagcagcagcaag 1304
>dbj|AK068100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130K11, full insert sequence Length = 1560 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaaggtct 152 ||||| |||||||||||||||||| Sbjct: 1345 gcagcagcagcagcagcaaggtct 1368
>gb|BC072021.1| Homo sapiens C-terminal binding protein 1, mRNA (cDNA clone IMAGE:6338360), partial cds Length = 1497 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaag 360 ||||||||| ||||||||||| |||||| Sbjct: 1146 tgtgtggcataaaaagaaaaacgggaag 1119
>gb|BC064333.1| Homo sapiens C-terminal binding protein 1, mRNA (cDNA clone IMAGE:5806192) Length = 3490 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 tgtgtggcagaaaaagaaaaatgggaag 360 ||||||||| ||||||||||| |||||| Sbjct: 3114 tgtgtggcataaaaagaaaaacgggaag 3087
>gb|AC157775.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0064O05, complete sequence Length = 28847 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 18645 gcagcggcagcagcagcaag 18626
>gb|AF059516.1|AF059516 Homo sapiens tolloid-like 2 protein (TLL2) mRNA, complete cds Length = 5021 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||| |||||||||||||||||| Sbjct: 428 cgcgaggcagcggcagcagcagca 405
>gb|AC114425.14| Mus musculus chromosome 5, clone RP24-85B11, complete sequence Length = 208233 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gttcttggtttcttttcaac 297 |||||||||||||||||||| Sbjct: 16835 gttcttggtttcttttcaac 16816
>gb|AE003638.2| Drosophila melanogaster chromosome 2L, section 47 of 83 of the complete sequence Length = 254309 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 177830 gcagcggcagcagcagcaag 177849
>dbj|AP001021.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-793A3, complete sequence Length = 222596 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 tgtgtggcagaaaaagaaaa 352 |||||||||||||||||||| Sbjct: 203507 tgtgtggcagaaaaagaaaa 203526
>dbj|AB002314.3| Homo sapiens mRNA for KIAA0316 protein, partial cds Length = 6352 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcacctcgtcctcgtcctc 36 |||||||||||||||||||| Sbjct: 2770 ctcacctcgtcctcgtcctc 2751
>gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, complete sequence Length = 231380 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gacatacaaaggctgcagca 173 |||||||||||||||||||| Sbjct: 204609 gacatacaaaggctgcagca 204628
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgcagcggcagcagcagcaa 147 |||||||||||||||||||| Sbjct: 25181686 tgcagcggcagcagcagcaa 25181667
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 cgatgcagcggcagcagcagcaag 148 ||||||||| |||||||||||||| Sbjct: 102274 cgatgcagcagcagcagcagcaag 102297
>gb|AC114622.12| Mus musculus chromosome 5, clone RP24-103L18, complete sequence Length = 162467 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gttcttggtttcttttcaac 297 |||||||||||||||||||| Sbjct: 135063 gttcttggtttcttttcaac 135044
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gcagaaaaagaaaaatggga 358 |||||||||||||||||||| Sbjct: 587153 gcagaaaaagaaaaatggga 587134
>dbj|AP005228.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-119P12, complete sequence Length = 186978 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 tgtgtggcagaaaaagaaaa 352 |||||||||||||||||||| Sbjct: 45622 tgtgtggcagaaaaagaaaa 45641
>ref|NM_053360.2| Rattus norvegicus SH3-domain kinase binding protein 1 (Sh3kbp1), mRNA Length = 3310 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||||||||| |||||||||||| Sbjct: 34 cgcgatgcagcagcagcagcagca 57
>gb|AC153541.4| Mus musculus 10 BAC RP23-80P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222655 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gccattcaagactcacctca 20 |||||||||||||||||||| Sbjct: 207943 gccattcaagactcacctca 207962
>emb|AL845304.4| Mouse DNA sequence from clone RP23-184H6 on chromosome X, complete sequence Length = 160065 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 34429 gcagcggcagcagcagcaag 34448
>emb|AL627103.13| Mouse DNA sequence from clone RP23-414M10 on chromosome 4, complete sequence Length = 194995 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gagtggttcttggtttcttt 292 |||||||||||||||||||| Sbjct: 11456 gagtggttcttggtttcttt 11475
>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete sequence Length = 227918 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cgcgatgcagcggcagcagcagca 146 ||||||||||| |||||||||||| Sbjct: 224344 cgcgatgcagcagcagcagcagca 224367
>emb|AL929257.9| Mouse DNA sequence from clone RP23-75A23 on chromosome 2, complete sequence Length = 180619 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gcagcggcagcagcagcaag 148 |||||||||||||||||||| Sbjct: 132552 gcagcggcagcagcagcaag 132533
>emb|AJ270172.1|MLI270172 Microstomum lineare partial 28S rRNA gene Length = 1662 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gtggctcaagcccagagagg 208 |||||||||||||||||||| Sbjct: 163 gtggctcaagcccagagagg 182 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,562,044 Number of Sequences: 3902068 Number of extensions: 5562044 Number of successful extensions: 226310 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 224554 Number of HSP's gapped (non-prelim): 1756 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)