Clone Name | bastl19a10 |
---|---|
Clone Library Name | barley_pub |
>WFDC1_HUMAN (Q9HC57) WAP four-disulfide core domain protein 1 precursor| (Prostate stromal protein ps20) (ps20 growth inhibitor) Length = 220 Score = 29.3 bits (64), Expect = 3.2 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 7/39 (17%) Frame = -1 Query: 117 PQHRRCLVGGVR-------PPPAAMAWLHQPIASPRAAG 22 P+HRRC G PPP + WL QP PR G Sbjct: 90 PRHRRCCYNGCAYACLEAVPPPPVLDWLVQP--KPRWLG 126
>WFDC1_RAT (O70280) WAP four-disulfide core domain protein 1 precursor| (Prostate stromal protein ps20) (ps20 growth inhibitor) Length = 212 Score = 29.3 bits (64), Expect = 3.2 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 7/39 (17%) Frame = -1 Query: 117 PQHRRCLVGGVR-------PPPAAMAWLHQPIASPRAAG 22 P+HRRC G PPP + WL QP PR G Sbjct: 82 PRHRRCCYNGCAYACLEAVPPPPVLDWLVQP--KPRWLG 118
>WFDC1_MOUSE (Q9ESH5) WAP four-disulfide core domain protein 1 precursor| (Prostate stromal protein ps20) (ps20 growth inhibitor) Length = 211 Score = 29.3 bits (64), Expect = 3.2 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 7/39 (17%) Frame = -1 Query: 117 PQHRRCLVGGVR-------PPPAAMAWLHQPIASPRAAG 22 P+HRRC G PPP + WL QP PR G Sbjct: 81 PRHRRCCYNGCAYACLEAVPPPPVLDWLVQP--KPRWLG 117
>CTTB2_HUMAN (Q8WZ74) Cortactin-binding protein 2 (CortBP2)| Length = 1663 Score = 29.3 bits (64), Expect = 3.2 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 118 SSAPPLPRRRCAPSAGGDGLAPSTNRLP 35 SS PPLP P+A G+AP ++ P Sbjct: 396 SSTPPLPSNAAPPTAQTPGIAPQNSQAP 423
>GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 454 Score = 28.9 bits (63), Expect = 4.1 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +1 Query: 22 TGSARGGDWLMEPGHRRRRRA 84 +GS G WL PG RRRR A Sbjct: 316 SGSPDAGSWLPSPGRRRRRTA 336
>Y95_ADE02 (P03286) Hypothetical protein E-95| Length = 95 Score = 28.1 bits (61), Expect = 7.1 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -1 Query: 132 PAPCLPQHRRCLVGG---VRPPPAAMAWLHQPIASPRAAG 22 P+ LP R+ V G V PP + AW P +PR+ G Sbjct: 48 PSVLLPGGRKTTVAGDSCVSPPLSTDAWPENPAGTPRSDG 87
>LAMBV_CHICK (Q01636) Laminin beta-1 chain variant (Laminin beta-1-2 chain)| (Fragment) Length = 198 Score = 27.7 bits (60), Expect = 9.2 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 115 SAPPLPRRRCAPSAGGDGLAPSTNRLPARC 26 S PPLP R A AG D + +RLP C Sbjct: 53 SPPPLPPRPAAVRAGRDRVGRVFSRLPPGC 82
>GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 452 Score = 27.7 bits (60), Expect = 9.2 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 Query: 22 TGSARGGDWLMEPGHRRRRRA 84 +G+ G WL PG RRRR A Sbjct: 314 SGAPDAGSWLPSPGRRRRRTA 334 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,147,780 Number of Sequences: 219361 Number of extensions: 359681 Number of successful extensions: 1824 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1742 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1823 length of database: 80,573,946 effective HSP length: 19 effective length of database: 76,406,087 effective search space used: 1833746088 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)