>HOX1A_MAIZE (P46605) Homeobox protein HOX1A|
          Length = 719

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 21/59 (35%), Positives = 34/59 (57%)
 Frame = +3

Query: 315 RGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPK 491
           RG+KGSQ    + Y   S++S  RVLRSTS  K+ +     +P++ A    ++ R++ K
Sbjct: 57  RGKKGSQGLTGQAYTLMSSNSDVRVLRSTSSSKTTSTEHVQAPVQPAAKRRKMSRASNK 115

>MSH6_YEAST (Q03834) MutS protein homolog 6|
          Length = 1242

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
 Frame = +3

Query: 330 SQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEP-VSPLRS---AHSSPRVLRSTPK 491
           ++ T+ KK+   ++HSS+   R+ S+D SK  + P  +P RS   +HS P     + K
Sbjct: 211 AETTSKKKFSYNTSHSSSPFTRNISRDNSKKKSRPNQAPSRSYNPSHSQPSATSKSSK 268

>VE2_HPV38 (Q80910) Regulatory protein E2|
          Length = 441

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +3

Query: 165 P*VSQDWPISSRREGRSAVIIYMDKTSASGL---VQENKKVGNDSSSPPTKGKRGRKGSQ 335
           P  S   P+    +  S   +    TS S      Q  ++ G  +SSP T  +R RKG +
Sbjct: 197 PVTSSTPPVGDSTDSASRAALPEPSTSVSPERPPSQTARRYGRKASSPSTTSRRQRKGQR 256

Query: 336 ITASKKYLRRSAHSSARVLRSTSKD--KSKTPNEPVSPLR 449
            T   +  RR + S +R      +D  +S +    VSP R
Sbjct: 257 ETTGTQ-RRRKSRSRSRSTNRGGRDTRRSSSRGSSVSPTR 295

>YJY1_SCHPO (Q9USN8) Hypothetical protein C132.01c in chromosome III|
          Length = 1021

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
 Frame = +3

Query: 282 NDSSSPPTKG--------KRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 416
           N+ S+P T G        KRG+KGS++  +KK   +    + R  R T+ ++S
Sbjct: 751 NNQSTPDTTGSDIHIVSEKRGKKGSKVITAKKVSAKERREARRARRQTALEES 803

>VAC7_YEAST (P53950) Vacuolar segregation protein 7|
          Length = 1165

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
 Frame = +3

Query: 186 PISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKG----KRGRKG-----SQI 338
           P SS R  +S++++  +   AS +    KK    S++ PT      +  R       S  
Sbjct: 143 PSSSLRNKKSSLLVASNPAFASDVELSKKKPAVISNNMPTSNIALYQTARSANIHGPSST 202

Query: 339 TASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPL--RSAHSSPRVL 476
           +ASK + + SA S+     +++   S TP  P+ PL   S  + P+++
Sbjct: 203 SASKAFRKASAFSNNTAPSTSNNIGSNTPPAPLLPLPSLSQQNKPKII 250

>CCNL2_MOUSE (Q9JJA7) Cyclin-L2 (Cyclin Ania-6b) (Paneth cell-enhanced|
           expression protein) (PCEE)
          Length = 518

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
 Frame = +3

Query: 234 DKTSASGLVQENKKVGNDSSSPPTKGKRGR--KGSQITASKK-----YLRRSAHSSARVL 392
           D  S SG  +   +  + S SPP +  RG   KGS++  S+K     YL +  H S    
Sbjct: 404 DSGSTSGGSKSQSRSRSRSDSPPRQVHRGAPYKGSEVRGSRKSKDCKYLTQKPHKSRS-- 461

Query: 393 RSTSKDKSKT 422
           RS+S+ +S++
Sbjct: 462 RSSSRSRSRS 471

>YBL7_YEAST (P38213) Protein YBR007C|
          Length = 736

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = +3

Query: 243 SASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKT 422
           S++  + +   + ND S PPT   +  K      S K L +S        R+ +K+K   
Sbjct: 337 SSTSTITKTNTMTNDISLPPTPPYKAHKKKTSLNSLKKLFKSP-------RTRAKNKKDL 389

Query: 423 PNEPVSPLRSAHSS 464
            +E  SP+RSA +S
Sbjct: 390 ESEGSSPIRSATNS 403

>PGLRX_COCCA (Q00359) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG)|
           (Galacturan 1,4-alpha-galacturonidase)
           (Poly(1,4-alpha-D-galacturonide)galacturonohydrolase)
          Length = 446

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -1

Query: 219 PPTDLLCGN**ASPG-RLRVSLVELLSGGEDDPVNFFRSIEMCRGLAAASAPRAWRF 52
           PP   L G   + PG R +  +++ L GG+DD  N   +++ C        P+  +F
Sbjct: 36  PPVPFLPGKASSVPGSRNKTCMLKALGGGKDDSANILSAVKQCNNGGHVVFPKGQQF 92

>VE2_HPV47 (P22420) Regulatory protein E2|
          Length = 506

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
 Frame = +3

Query: 174 SQDWPISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKK 353
           S+    +SRR GR +      + S S    +  + GN       +G++GR GS     ++
Sbjct: 311 SRSTSTTSRRGGRGSSTRQRSR-SPSTYTSKRSREGNTRGRG--RGRQGRAGSSGGREQR 367

Query: 354 YLRRS----AHSSARVLRSTSKDKSKTPNEPVSPLRS 452
             RRS      SS RV R + K +  +P+E    LRS
Sbjct: 368 RRRRSFSTSPDSSKRVRRESPKYRGVSPSEVGKQLRS 404

>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)|
           [Contains: Micronuclear linker histone-alpha;
           Micronuclear linker histone-beta; Micronuclear linker
           histone-delta; Micronuclear linker histone-gamma]
          Length = 633

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +3

Query: 237 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 416
           K+S+ G  ++N K    S S      + RK +  + SKK        +    RS SK KS
Sbjct: 493 KSSSKG--KKNSKSNTRSKSKSKSASKSRKNA--SKSKKDTTNHGRQTRSKSRSESKSKS 548

Query: 417 KTPNEP 434
           + PN+P
Sbjct: 549 EAPNKP 554



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 29/91 (31%), Positives = 42/91 (46%)
 Frame = +3

Query: 192 SSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSA 371
           SS  +GRS       + ++S   Q+    G  SSS      +GRK S  T++K   R S+
Sbjct: 212 SSASQGRSQSSSSNRRKASSSKDQK----GTRSSSRKASNSKGRKNS--TSNK---RNSS 262

Query: 372 HSSARVLRSTSKDKSKTPNEPVSPLRSAHSS 464
            SS R   S +K  S + N+  S  +   SS
Sbjct: 263 SSSKRSSSSKNKKSSSSKNKKSSSSKGRKSS 293

>RED2_HUMAN (Q9NS39) Double-stranded RNA-specific editase B2 (EC 3.5.-.-)|
           (dsRNA adenosine deaminase B2) (RNA-dependent adenosine
           deaminase 3) (RNA-editing deaminase 2) (RNA-editing
           enzyme 2)
          Length = 739

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 240 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYL 359
           +++S  V+EN+ VGN ++ PP  G R R G+     K+ L
Sbjct: 63  STSSAEVKENRNVGNLAARPPPSGDRARGGAPGAKRKRPL 102

>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 23/85 (27%), Positives = 36/85 (42%)
 Frame = +3

Query: 237 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 416
           +TS S   QE+     +S++ PT        S  T+S      S+ +S+    STS   S
Sbjct: 202 QTSTSIASQES----TESTNTPTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTS 257

Query: 417 KTPNEPVSPLRSAHSSPRVLRSTPK 491
            T     +    + SS   + S+PK
Sbjct: 258 STQETAATTSEGSSSSSAAITSSPK 282

>TWST2_RAT (P97831) Twist-related protein 2|
          Length = 160

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
 Frame = +3

Query: 204 EGRSAVIIYMDK--TSASGLVQENKKVG--------NDSSSPPTKGKRGRKGSQITASKK 353
           EG S+ +  +D   TS   L ++ K+ G        +     PT GKRG+KGS    S +
Sbjct: 3   EGSSSPVSPVDSLGTSEEELERQPKRFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFE 62

Query: 354 YLRRSAHSSARVLRST-SKDKSKTPNEPVSPLR 449
            L+     S R+L +   + ++++ NE  + LR
Sbjct: 63  ELQ-----SQRILANVRERQRTQSLNEAFAALR 90

>TWST2_MOUSE (Q9D030) Twist-related protein 2 (Dermis expressed protein 1)|
           (Dermo-1)
          Length = 160

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
 Frame = +3

Query: 204 EGRSAVIIYMDK--TSASGLVQENKKVG--------NDSSSPPTKGKRGRKGSQITASKK 353
           EG S+ +  +D   TS   L ++ K+ G        +     PT GKRG+KGS    S +
Sbjct: 3   EGSSSPVSPVDSLGTSEEELERQPKRFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFE 62

Query: 354 YLRRSAHSSARVLRST-SKDKSKTPNEPVSPLR 449
            L+     S R+L +   + ++++ NE  + LR
Sbjct: 63  ELQ-----SQRILANVRERQRTQSLNEAFAALR 90

>TWST2_HUMAN (Q8WVJ9) Twist-related protein 2 (Dermis expressed protein 1)|
           (Dermo-1)
          Length = 160

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
 Frame = +3

Query: 204 EGRSAVIIYMDK--TSASGLVQENKKVG--------NDSSSPPTKGKRGRKGSQITASKK 353
           EG S+ +  +D   TS   L ++ K+ G        +     PT GKRG+KGS    S +
Sbjct: 3   EGSSSPVSPVDSLGTSEEELERQPKRFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFE 62

Query: 354 YLRRSAHSSARVLRST-SKDKSKTPNEPVSPLR 449
            L+     S R+L +   + ++++ NE  + LR
Sbjct: 63  ELQ-----SQRILANVRERQRTQSLNEAFAALR 90

>SFRS8_HUMAN (Q12872) Splicing factor, arginine/serine-rich 8 (Suppressor of|
           white apricot protein homolog)
          Length = 951

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 342 ASKKYLR-RSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSP 467
           AS+K  R RS H   +  RS S+ KSK  ++ VSP + A   P
Sbjct: 837 ASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRP 879

>YR871_MIMIV (Q5UP41) Hypothetical protein R871|
          Length = 561

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 282 NDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 416
           N SSS      RGR   +  +SKK+     H S++  +S+ +DKS
Sbjct: 122 NKSSSKDKSPSRGRSPKRHKSSKKHKSSKKHKSSKHDKSSKRDKS 166

>SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4|
          Length = 489

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 20/102 (19%)
 Frame = +3

Query: 237 KTSASGLVQENKKVGNDSSSPP---------TKGKRGRKGSQIT-----------ASKKY 356
           K S+S    + KK  + S SP           K + G++GS+             A  + 
Sbjct: 382 KVSSSSSSSKKKKDTDHSRSPSRSVSKEREHAKAESGQRGSRAEGESEAPNPEPRARSRS 441

Query: 357 LRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRS 482
             +S  +     RS SK  SKT +   SP RSA  SP   RS
Sbjct: 442 TSKSKPNVPAESRSRSKSASKTRSRSKSPSRSASRSPSRSRS 483

>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1|
           (RNA-binding protein srp-5) (CeSRp75)
          Length = 312

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
 Frame = +3

Query: 288 SSSPPTKGKRGRKGSQITASK------KYLRRSAHSSARVLRSTSKDK-SKTPNEPVSPL 446
           S SPP + +R  K    + S+      +  R  + S  +V RS S  + S++P+E  SP 
Sbjct: 238 SRSPPKRSRRESKSKSRSRSRSRSADNRKSRSPSRSPKKVDRSPSPPRGSRSPSEKGSPR 297

Query: 447 RSAHSSP 467
           RS  +SP
Sbjct: 298 RSRSASP 304

>SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)|
          Length = 1772

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = +3

Query: 177 QDWPISSRREGR-SAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKK 353
           Q+  ++SRR  R SA      K+  +    ++K   +  S   +KGK   + S+++ S++
Sbjct: 320 QEEEVTSRRGSRRSAPTKAKGKSKTASKTSKSKSKASSKSKSKSKGKGQARASKLSKSRR 379

Query: 354 YLRRSAHSSARVLRSTSKDKSKTPNEP 434
           Y+         V  S+ ++    PN+P
Sbjct: 380 YVN-------AVDSSSEEESDYDPNKP 399

>VE2_HPV09 (P36780) Regulatory protein E2|
          Length = 461

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
 Frame = +3

Query: 195 SRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQ--ITASKKYLRRS 368
           SR +GR+       +T   G  +   +  +  S+ PT  +RGR G +   T S+   R  
Sbjct: 279 SRSKGRT-------ETERGGERRRRGRSSSADSTTPTDRRRGRGGGRGPTTRSQSRSRSR 331

Query: 369 AHSSARVLRSTSKDKSKTPNEPVSPLRS 452
           +HS +R    T+     +P+E  + +RS
Sbjct: 332 SHSRSRSRGGTASRVGVSPDEVGTRVRS 359

>CWC27_USTMA (Q4P7H2) Peptidyl-prolyl isomerase CWC27 (EC 5.2.1.8)|
          Length = 485

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
 Frame = +3

Query: 243 SASGLVQENKKVGNDS--SSPPTKGKRGRKGSQITAS-KKYLRRSAHSSA--RVLRSTSK 407
           S+  L++++K +   +  +S  TK       + I++  K++L +S+ S+    V +  SK
Sbjct: 236 SSHDLLKDDKHLSRQTIETSKSTKANTPAVSANISSKEKRFLAQSSSSTTPPAVTKQASK 295

Query: 408 DKSKTPNEPVSPLRSAHSSP 467
           D +     P + L+S HS P
Sbjct: 296 DGTSDAPHPTATLKSEHSGP 315

>VE2_HPV5B (P26545) Regulatory protein E2|
          Length = 514

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
 Frame = +3

Query: 192 SSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSA 371
           S RR  RS        T +S   Q +++    + SP T+G RG +GS+  +    LRR  
Sbjct: 327 SPRRRSRSP------STYSSCTTQRSQRAR--AESPTTRGARGSRGSRGGSRGGRLRRRG 378

Query: 372 HSSA-------RVLRSTSKDKSKTPNEPVSPLRSAHS 461
            SS+       R    ++K +  +P E    LRS  S
Sbjct: 379 RSSSSSSPAHKRSRGGSAKLRGVSPGEVGGSLRSVSS 415

>ATU_DROME (Q94546) Another transcription unit protein|
          Length = 725

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
 Frame = +3

Query: 246 ASGLVQENKKVGNDS--SSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRST---SKD 410
           ASG  QE KK G+DS     PTK K+ R     + S + + + A ++A +       S D
Sbjct: 255 ASGSDQEKKKSGSDSDIEESPTKAKKSRLIDTDSDSNQDVGKKAPAAADIFGDADDISDD 314

Query: 411 KSKT-PNEPVSPLRSAHSS 464
           + +  P    SP+RS   S
Sbjct: 315 EDEAGPAARKSPVRSKSRS 333

>YOJ4_CAEEL (P34627) Hypothetical protein ZK353.4|
          Length = 305

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 21/76 (27%), Positives = 34/76 (44%)
 Frame = +3

Query: 237 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 416
           K S + L  E  K+ N SSS     + G    +I +  KY +    +   +   T+  ++
Sbjct: 159 KNSLTDLKNEATKMANTSSSA---NRTGEISVEIVSPSKYFQCLLPTHNLIPEPTTAVQA 215

Query: 417 KTPNEPVSPLRSAHSS 464
            TP +P+S   SA  S
Sbjct: 216 STPEKPMSSAESAMES 231

>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell|
           protein 0)
          Length = 532

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 234 DKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSK 407
           D +SA    QE+ +       PPT+G+  R+G +  A     RRSA    R  R+ S+
Sbjct: 245 DNSSAQAPRQEDSRPARARPGPPTRGR--RRGRRPAAPGPASRRSARLRRRQPRTNSR 300

>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0|
          Length = 532

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 234 DKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSK 407
           D +SA    QE+ +       PPT+G+  R+G +  A     RRSA    R  R+ S+
Sbjct: 245 DNSSAQAPRQEDSRPARARPGPPTRGR--RRGRRPAAPGPASRRSARLRRRQPRTNSR 300

>H14_MOUSE (P43274) Histone H1.4 (H1 VAR.2) (H1e)|
          Length = 218

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 20/82 (24%), Positives = 34/82 (41%)
 Frame = +3

Query: 240 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK 419
           T ASG  + NKK  +  + P  K     K  +   + K  +++A  +A   +ST K   K
Sbjct: 98  TGASGSFKLNKKAASGEAKPKAKRAGAAKAKKPAGAAKKPKKAA-GTATAKKSTKKTPKK 156

Query: 420 TPNEPVSPLRSAHSSPRVLRST 485
                 +       SP+  ++T
Sbjct: 157 AKKPAAAAGAKKAKSPKKAKAT 178

>GYRA_RICPR (P41080) DNA gyrase subunit A (EC 5.99.1.3)|
          Length = 905

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 23/88 (26%), Positives = 42/88 (47%)
 Frame = +1

Query: 112 KKVNWVIFPSRKQFNKAYPKSPRTGLSVPAEKVGRRSSFIWTKHLLLVLFRRIKKLGMIH 291
           K+V    + S+K+  K      R+GLS+  E +  +  F+ + H  ++ F  I K+  + 
Sbjct: 541 KRVPLSSYRSQKRGGKG-----RSGLSMRDEDITTQV-FVGSTHTPMLFFSNIGKVYSLK 594

Query: 292 HLLLPRGKGEGKGPRLQQVKSISGDLHI 375
              LP    +GKG  +  + S+  + HI
Sbjct: 595 LYKLPLSNPQGKGRPMVNILSLQENEHI 622

>CJ047_HUMAN (Q86WR7) Protein C10orf47|
          Length = 435

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   SPSCSRRRSREGVLEAAKSPGARCRGRGEAPAHFYRPKKVNWVIFPSRKQFNKAYPKSPR 180
           SP+   R  R G      + G R    G  P+H  +PK      FPS         + PR
Sbjct: 212 SPTSPFREGRPGEWRTPAARGPRSGDPGPGPSHPAQPKAPR---FPSNIIVTNGAAREPR 268

Query: 181 TGLSVPAEKV-GRRSSFIWTKH 243
             LS  A  V  RR+  + T H
Sbjct: 269 RTLSRAAVSVQERRAQVLATIH 290

>FMT_ENTFA (Q82ZD8) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 313

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -2

Query: 464 TTMSGSQWTYWLIRCLTLVF*SRAKNPGTTMCRSPEILFTCCNLG 330
           TT  G+ W  W +  LT    +    PGT + RS + L+  C  G
Sbjct: 236 TTYQGTNWKIWAVTPLTE---TTTSAPGTIIQRSKKALWIACGEG 277

>NIM1_NEUCR (P48479) G2-specific protein kinase nim-1 (EC 2.7.11.1)|
          Length = 779

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
 Frame = +3

Query: 234 DKTSASGLVQENKKVGNDSSSP-PTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKD 410
           D++ A  LV   K++   S +P  T   R R       +   L      S + L + SK 
Sbjct: 531 DESEAEALVPSPKRITKSSKNPFSTVTTRSRPSLNSQQNSNVLPIHGLRSKQTLATRSKT 590

Query: 411 KSKTPNEPVSPLRSAHSSPRVLRSTP 488
            S   +    PLRSA S+P +    P
Sbjct: 591 VSGVSSIGQHPLRSAPSAPSLRDRKP 616

>MOXR_PARDE (P29901) Protein moxR|
          Length = 339

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -1

Query: 216 PTDLLCGN**ASPGRLRVSLVELLSGGEDDPVNFFRSIEMCR 91
           PTDL+     A  GR R+    +L  GED  V FF  I   R
Sbjct: 79  PTDLIYSTHIAEDGRPRIEPGPVLEQGEDMAVFFFNEINRAR 120

>KC13_YEAST (P39962) Casein kinase I homolog 3 (EC 2.7.11.1)|
          Length = 524

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
 Frame = +3

Query: 189 ISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRS 368
           +++  + R+   +   K  A     ++      SS+P +  K+     +I  + KY+  +
Sbjct: 370 VNTNSKTRNTTPVATPKQQAQNSYNKDNSKSRISSNPQSFTKQQHVLKKIEPNSKYIPET 429

Query: 369 AHSSARVLRSTSK---DKSKTPNEPVSPLRSAHSSPR 470
             +  R ++S S+     S T N P  P  S+ ++P+
Sbjct: 430 HSNLQRPIKSQSQTYDSISHTQNSPFVPYSSSKANPK 466

>H12_HUMAN (P16403) Histone H1.2 (Histone H1d)|
          Length = 212

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 22/84 (26%), Positives = 37/84 (44%)
 Frame = +3

Query: 240 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK 419
           T ASG  + NKK  +  + P  K   G K  +   + K  +++A  +     +  K   K
Sbjct: 98  TGASGSFKLNKKAASGEAKPKVKKAGGTKPKKPVGAAKKPKKAAGGA-----TPKKSAKK 152

Query: 420 TPNEPVSPLRSAHSSPRVLRSTPK 491
           TP +   P  +A  + +V +S  K
Sbjct: 153 TPKKAKKP-AAATVTKKVAKSPKK 175


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,490,533
Number of Sequences: 219361
Number of extensions: 1714613
Number of successful extensions: 4662
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 4446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4653
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)