Clone Name | bastl19a01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | OC17_CHICK (Q9PRS8) Ovocleidin-17 (OC-17) | 30 | 3.4 | 2 | CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (... | 29 | 7.6 | 3 | BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ... | 28 | 9.9 |
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>OC17_CHICK (Q9PRS8) Ovocleidin-17 (OC-17)| Length = 142 Score = 30.0 bits (66), Expect = 3.4 Identities = 15/42 (35%), Positives = 16/42 (38%) Frame = -3 Query: 131 GERGREWSSWLVSRAPLWLAGERARADGRCCRLSDSE*PYGW 6 G R WS R W +AR GRC L D E W Sbjct: 84 GSRSWRWSDGTAPRFASWHRTAKARRGGRCAALRDEEAFTSW 125
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 28.9 bits (63), Expect = 7.6 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 4/26 (15%) Frame = +2 Query: 404 GNVLYDW----SGDDHCSWRGVLCDN 469 G+ L+DW S D HCS+ GV CD+ Sbjct: 43 GHGLHDWIHSSSPDAHCSFSGVSCDD 68
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Frame = +2 Query: 407 NVLYDW---SGDDHCSWRGVLCDN 469 NVL +W SG CSWRGV C + Sbjct: 52 NVLGNWKYESGRGSCSWRGVSCSD 75 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.132 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,037,456 Number of Sequences: 219361 Number of extensions: 526785 Number of successful extensions: 1312 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1286 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1312 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)