Clone Name | bastl18h06 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_196176.1| Oryza sativa (japonica cultivar-group) putative Tyrosine/DOPA decarboxylase 2 (OSJNBa0032N04.8), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gcgccgccccggcgccgcacggcg 265 |||||||| ||||||||||||||| Sbjct: 863 gcgccgccgcggcgccgcacggcg 886
>gb|AC135557.5| Oryza sativa chromosome 3 BAC OJ1285_H07 genomic sequence, complete sequence Length = 113685 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cactagaaaaggctttgatt 226 |||||||||||||||||||| Sbjct: 15178 cactagaaaaggctttgatt 15197
>ref|XM_364392.1| Magnaporthe grisea 70-15 hypothetical protein (MG09237.4) partial mRNA Length = 1140 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 230 ccgggcgtcatggcgccgccccggcgcc 257 |||||| ||||||||||||||| ||||| Sbjct: 478 ccgggcctcatggcgccgcccccgcgcc 505
>gb|BC068695.1| Xenopus laevis hypothetical protein MGC81110, mRNA (cDNA clone MGC:81110 IMAGE:6317289), complete cds Length = 1945 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tctcacactagaaaaggctt 221 |||||||||||||||||||| Sbjct: 839 tctcacactagaaaaggctt 858
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cactagaaaaggctttgatt 226 |||||||||||||||||||| Sbjct: 23152148 cactagaaaaggctttgatt 23152129
>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145 biosynthetic gene cluster, complete sequence Length = 126933 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ccggcgccgcacggcggcgg 269 |||||||||||||||||||| Sbjct: 86301 ccggcgccgcacggcggcgg 86282
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gcgccgccccggcgccgcacggcg 265 |||||||| ||||||||||||||| Sbjct: 62852 gcgccgccgcggcgccgcacggcg 62829
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gcgccgccccggcgccgcacggcg 265 |||||||| ||||||||||||||| Sbjct: 169528 gcgccgccgcggcgccgcacggcg 169551
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gcgccgccccggcgccgcacggcg 265 |||||||| ||||||||||||||| Sbjct: 11744791 gcgccgccgcggcgccgcacggcg 11744768
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cactagaaaaggctttgatt 226 |||||||||||||||||||| Sbjct: 23145176 cactagaaaaggctttgatt 23145157
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gcgccgccccggcgccgcacggcg 265 |||| ||||||||||||||||||| Sbjct: 287758 gcgcggccccggcgccgcacggcg 287781
>dbj|AK071938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013083I02, full insert sequence Length = 1675 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cactagaaaaggctttgatt 226 |||||||||||||||||||| Sbjct: 95 cactagaaaaggctttgatt 76
>dbj|AK065088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L20, full insert sequence Length = 3446 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cactagaaaaggctttgatt 226 |||||||||||||||||||| Sbjct: 1887 cactagaaaaggctttgatt 1868
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggcgccgccccggcgccgc 259 |||||||||||||||||||| Sbjct: 372440 tggcgccgccccggcgccgc 372421
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gcgccgccccggcgccgcacggcg 265 |||||||| ||||||||||||||| Sbjct: 11752131 gcgccgccgcggcgccgcacggcg 11752108
>gb|AC091404.2| Sus scrofa clone RP44-74O11, complete sequence Length = 102386 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ctgaatctttctcccccaaa 94 |||||||||||||||||||| Sbjct: 7237 ctgaatctttctcccccaaa 7256 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,733,539 Number of Sequences: 3902068 Number of extensions: 2733539 Number of successful extensions: 36069 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 35784 Number of HSP's gapped (non-prelim): 285 length of query: 325 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 303 effective length of database: 17,147,199,772 effective search space: 5195601530916 effective search space used: 5195601530916 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)