Clone Name | bastl18h05 |
---|---|
Clone Library Name | barley_pub |
>CAPP1_SORBI (P29195) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase| 1) (PEPC 1) (CP21) Length = 960 Score = 154 bits (390), Expect = 6e-38 Identities = 76/80 (95%), Positives = 77/80 (96%) Frame = +2 Query: 173 ERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSAE 352 ERHQSIDAQLRLL PGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSAE Sbjct: 3 ERHQSIDAQLRLLAPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSAE 62 Query: 353 YETDRDEARIAELGSKLTSL 412 YE DRDEAR+ ELGSKLTSL Sbjct: 63 YENDRDEARLGELGSKLTSL 82
>CAPP1_MAIZE (P04711) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase| 1) (PEPC 1) Length = 970 Score = 130 bits (327), Expect = 1e-30 Identities = 64/90 (71%), Positives = 73/90 (81%) Frame = +2 Query: 143 MAAPSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREF 322 MA+ E+H SIDAQLR LVPGKVSEDDKL+EYDALLVDRFL+ILQDLHGP LREF Sbjct: 1 MASTKAPGPGEKHHSIDAQLRQLVPGKVSEDDKLIEYDALLVDRFLNILQDLHGPSLREF 60 Query: 323 VQECYELSAEYETDRDEARIAELGSKLTSL 412 VQECYE+SA+YE D ++ ELG+KLT L Sbjct: 61 VQECYEVSADYEGKGDTTKLGELGAKLTGL 90
>CAPP2_SORBI (P29194) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCase| 2) (PEPC 2) (CP28) Length = 960 Score = 123 bits (308), Expect = 2e-28 Identities = 60/81 (74%), Positives = 69/81 (85%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 MER SIDAQLR+LVPGKVSEDDKL+EYDALL+DRFLDILQDLHG L+E VQECYE++A Sbjct: 1 MERLSSIDAQLRMLVPGKVSEDDKLIEYDALLLDRFLDILQDLHGDDLKEMVQECYEVAA 60 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYET D ++ ELG +TSL Sbjct: 61 EYETKHDLQKLDELGKMITSL 81
>CAPP2_MAIZE (P51059) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCase| 2) (PEPC 2) Length = 967 Score = 123 bits (308), Expect = 2e-28 Identities = 60/81 (74%), Positives = 69/81 (85%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 MER SIDAQLR+LVPGKVSEDDKL+EYDALL+DRFLDILQDLHG L+E VQECYE++A Sbjct: 8 MERLSSIDAQLRMLVPGKVSEDDKLIEYDALLLDRFLDILQDLHGDDLKEMVQECYEVAA 67 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYET D ++ ELG +TSL Sbjct: 68 EYETKHDLQKLDELGKMITSL 88
>CAPP3_SORBI (P15804) Phosphoenolpyruvate carboxylase 3 (EC 4.1.1.31) (PEPCase| 3) (PEPC 3) (CP46) Length = 960 Score = 122 bits (305), Expect = 4e-28 Identities = 60/82 (73%), Positives = 70/82 (85%) Frame = +2 Query: 167 AMERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELS 346 A ERH SIDAQLR L PGKVSE+ L++YDALLVDRFLDILQDLHGP LREFVQECYE+S Sbjct: 2 ASERHHSIDAQLRALAPGKVSEE--LIQYDALLVDRFLDILQDLHGPSLREFVQECYEVS 59 Query: 347 AEYETDRDEARIAELGSKLTSL 412 A+YE +D +++ ELG+KLT L Sbjct: 60 ADYEGKKDTSKLGELGAKLTGL 81
>CAPP1_FLAPR (Q01647) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 967 Score = 122 bits (305), Expect = 4e-28 Identities = 61/81 (75%), Positives = 69/81 (85%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SIDAQLRLLVPGKVSEDDKL+EYDALL+D+FLDILQDLHG L+E VQECYELSA Sbjct: 6 LEKLASIDAQLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEDLKEAVQECYELSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELGS LTSL Sbjct: 66 EYEGKHDPKKLEELGSVLTSL 86
>CAPP_FLAAU (Q42730) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 966 Score = 120 bits (302), Expect = 9e-28 Identities = 61/81 (75%), Positives = 69/81 (85%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SIDAQLRLLVPGKVSEDDKLVEYDALL+D+FLDILQDLHG L+E VQ+CYELSA Sbjct: 6 VEKLASIDAQLRLLVPGKVSEDDKLVEYDALLLDKFLDILQDLHGEDLKEAVQQCYELSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELGS LTSL Sbjct: 66 EYEGKHDPKKLEELGSLLTSL 86
>CAPP2_FLATR (P30694) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 966 Score = 120 bits (302), Expect = 9e-28 Identities = 61/81 (75%), Positives = 69/81 (85%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SIDAQLRLLVPGKVSEDDKLVEYDALL+D+FLDILQDLHG L+E VQ+CYELSA Sbjct: 6 VEKLASIDAQLRLLVPGKVSEDDKLVEYDALLLDKFLDILQDLHGEDLKEAVQQCYELSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELGS LTSL Sbjct: 66 EYEGKHDPKKLEELGSLLTSL 86
>CAPP_TOBAC (P27154) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 964 Score = 120 bits (302), Expect = 9e-28 Identities = 61/82 (74%), Positives = 69/82 (84%) Frame = +2 Query: 167 AMERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELS 346 ++E+ SIDAQLR LVPGKVSEDDKLVEYDALL+DRFLDILQDLHG L+E VQECYELS Sbjct: 5 SLEKLASIDAQLRALVPGKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKETVQECYELS 64 Query: 347 AEYETDRDEARIAELGSKLTSL 412 AEYE D ++ ELG+ LTSL Sbjct: 65 AEYEGKHDPKKLEELGNVLTSL 86
>CAPP2_ARATH (Q5GM68) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCase| 2) (PEPC 2) (AtPPC2) Length = 963 Score = 120 bits (301), Expect = 1e-27 Identities = 57/81 (70%), Positives = 71/81 (87%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SIDAQLRLL PGKVSEDDKL+EYDALL+DRFLDILQDLHG +REFVQECYE++A Sbjct: 6 LEKMASIDAQLRLLAPGKVSEDDKLIEYDALLLDRFLDILQDLHGEDVREFVQECYEVAA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 +Y+ +R+ ++ ELG+ LTSL Sbjct: 66 DYDGNRNTEKLEELGNMLTSL 86
>CAPP1_FLATR (Q01648) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 967 Score = 120 bits (301), Expect = 1e-27 Identities = 61/81 (75%), Positives = 69/81 (85%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SIDAQLRLLVPGKVSEDDKLVEYDALL+D+FLDILQDLHG L+E VQ+CYELSA Sbjct: 6 VEKLASIDAQLRLLVPGKVSEDDKLVEYDALLLDKFLDILQDLHGEDLKEAVQQCYELSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELGS LTSL Sbjct: 66 EYEGKHDPKKLDELGSLLTSL 86
>CAPP_SOLTU (P29196) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 965 Score = 117 bits (293), Expect = 1e-26 Identities = 59/81 (72%), Positives = 67/81 (82%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +++ SIDAQLR LVP KVSEDDKLVEYDALL+DRFLDILQDLHG L+E VQECYELSA Sbjct: 6 LDKLASIDAQLRQLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKETVQECYELSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELG+ LTSL Sbjct: 66 EYEAKHDPKKLEELGNVLTSL 86
>CAPP3_ARATH (Q84VW9) Phosphoenolpyruvate carboxylase 3 (EC 4.1.1.31) (PEPCase| 3) (PEPC 3) (AtPPC3) Length = 968 Score = 117 bits (293), Expect = 1e-26 Identities = 61/81 (75%), Positives = 68/81 (83%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SIDAQLR LVP KVSEDDKLVEYDALL+DRFLDILQDLHG LRE VQE YELSA Sbjct: 6 IEKMASIDAQLRQLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLRETVQELYELSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE R+ +++ ELGS LTSL Sbjct: 66 EYEGKREPSKLEELGSVLTSL 86
>CAPP2_MESCR (P16097) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCase| 2) (PEPC 2) Length = 960 Score = 117 bits (292), Expect = 1e-26 Identities = 60/76 (78%), Positives = 64/76 (84%) Frame = +2 Query: 185 SIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSAEYETD 364 SIDAQLRLLVP KVSEDDKLVEYDALL+DRFLDILQDLHG +RE VQECYE SAEYE Sbjct: 3 SIDAQLRLLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYERSAEYEGK 62 Query: 365 RDEARIAELGSKLTSL 412 D ++ ELGS LTSL Sbjct: 63 HDPKKLDELGSVLTSL 78
>CAPP_PICAB (P51063) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 963 Score = 116 bits (290), Expect = 2e-26 Identities = 57/81 (70%), Positives = 66/81 (81%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SIDAQ+RLLVPGKVSEDDKL+EYDALL+DRFLDILQDLHG +R VQECYE S Sbjct: 6 LEKMASIDAQMRLLVPGKVSEDDKLIEYDALLLDRFLDILQDLHGEDIRAMVQECYERSG 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELG+ LTSL Sbjct: 66 EYEGKNDPHKLEELGNVLTSL 86
>CAPP1_SOYBN (Q02909) Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC| 4.1.1.31) (PEPCase) (PEPC 1) Length = 967 Score = 115 bits (289), Expect = 3e-26 Identities = 59/81 (72%), Positives = 67/81 (82%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SIDAQLRLLVP KVSEDDKLVEYDALL+DRFLDILQDLHG L+E VQE YELSA Sbjct: 6 LEKMASIDAQLRLLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKETVQEVYELSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELG+ +TSL Sbjct: 66 EYEGKHDPKKLEELGNLITSL 86
>CAPP1_SACHY (P29193) Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC| 4.1.1.31) (PEPCase) (PEPC) Length = 966 Score = 112 bits (281), Expect = 3e-25 Identities = 56/82 (68%), Positives = 67/82 (81%) Frame = +2 Query: 167 AMERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELS 346 A+++ SIDAQLRLL P K+S+DDKLVEYDALL+DRFLDILQDLHG +RE VQECYEL+ Sbjct: 5 AVDKATSIDAQLRLLAPQKLSDDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELA 64 Query: 347 AEYETDRDEARIAELGSKLTSL 412 AEYE D + E+G+ LTSL Sbjct: 65 AEYENKLDPKMLDEIGNVLTSL 86
>CAPP_MEDSA (Q02735) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 966 Score = 112 bits (279), Expect = 4e-25 Identities = 56/80 (70%), Positives = 65/80 (81%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 ME+ SIDAQLR LVP KVSEDDKL+EYDALL+DRFLDILQDLHG L++ VQE YELSA Sbjct: 5 MEKMASIDAQLRQLVPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKDSVQEVYELSA 64 Query: 350 EYETDRDEARIAELGSKLTS 409 EYE D ++ ELG+ +TS Sbjct: 65 EYERKHDPKKLEELGNLITS 84
>CAPP2_SOYBN (P51061) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 967 Score = 111 bits (278), Expect = 6e-25 Identities = 56/81 (69%), Positives = 65/81 (80%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SIDAQLR L P KVSEDDKL+EYDALL+DRFLDILQDLHG L+E VQE YELSA Sbjct: 6 LEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEVYELSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELG+ +TSL Sbjct: 66 EYEGKHDPKKLEELGNLITSL 86
>CAPP1_ARATH (Q9MAH0) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase| 1) (PEPC 1) (AtPPC1) Length = 967 Score = 111 bits (277), Expect = 7e-25 Identities = 58/81 (71%), Positives = 64/81 (79%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SID LR LVPGKVSEDDKLVEYDALL+DRFLDILQDLHG LRE VQE YE SA Sbjct: 6 LEKMASIDVHLRQLVPGKVSEDDKLVEYDALLLDRFLDILQDLHGEDLRETVQELYEHSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE + ++ ELGS LTSL Sbjct: 66 EYEGKHEPKKLEELGSVLTSL 86
>CAPP_PEA (P51062) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 967 Score = 110 bits (274), Expect = 2e-24 Identities = 55/81 (67%), Positives = 63/81 (77%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 ME+ SIDAQLR L P KVSEDDKL+EYDALL+DRFLDILQDLHG L++ VQE YELSA Sbjct: 5 MEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKDSVQEVYELSA 64 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELG +T L Sbjct: 65 EYERKHDPKKLEELGKLITGL 85
>CAPP_PHAVU (Q9AU12) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 968 Score = 109 bits (273), Expect = 2e-24 Identities = 55/81 (67%), Positives = 65/81 (80%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 +E+ SIDAQLR L P KVSEDDKL+EYDALL+DRFLDILQ+LHG L+E VQE YELSA Sbjct: 6 LEKMASIDAQLRQLAPSKVSEDDKLIEYDALLLDRFLDILQNLHGEDLKETVQEVYELSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELG+ +TSL Sbjct: 66 EYEGKHDPKKLEELGNVITSL 86
>CAPP1_MESCR (P10490) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase| 1) (PEPC 1) Length = 966 Score = 109 bits (272), Expect = 3e-24 Identities = 55/81 (67%), Positives = 65/81 (80%) Frame = +2 Query: 170 MERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQECYELSA 349 ++R SIDAQLRLL P KVSEDDKL+EYDALL+DRFLDILQ+LHG ++E VQE YE SA Sbjct: 6 LDRLTSIDAQLRLLAPKKVSEDDKLIEYDALLLDRFLDILQNLHGEDIKETVQELYEQSA 65 Query: 350 EYETDRDEARIAELGSKLTSL 412 EYE D ++ ELGS +TSL Sbjct: 66 EYERTHDPKKLEELGSMVTSL 86
>CAPP_AMAHP (Q43299) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 964 Score = 107 bits (266), Expect = 1e-23 Identities = 57/86 (66%), Positives = 67/86 (77%) Frame = +2 Query: 155 SGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQEC 334 SGK +E+ SIDAQLRLL P KVSEDDKLVEYDALL+DRFLDIL+ LHG +RE VQE Sbjct: 3 SGK--VEKMASIDAQLRLLAPKKVSEDDKLVEYDALLLDRFLDILESLHGSGIRETVQEL 60 Query: 335 YELSAEYETDRDEARIAELGSKLTSL 412 YE +AEYE D ++ ELG+ +TSL Sbjct: 61 YEHAAEYERTHDTKKLEELGNLITSL 86
>HLDE_PHOPR (Q6LUZ5) Bifunctional protein hldE [Includes: D-beta-D-heptose| 7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose 7-phosphotransferase); D-beta-D-heptose 1-phosphate adenosyltransferase (EC 2.7.7.-)] Length = 476 Score = 32.0 bits (71), Expect = 0.58 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 14/65 (21%) Frame = +2 Query: 209 LVPGKVSEDDKLVEYDALLVDRF-------------LDILQDLHGP-HLREFVQECYELS 346 LV GKV+ DD+LVE L++RF + +LQ P HL QE Y+++ Sbjct: 201 LVAGKVTSDDELVEKGFELIERFDFEALLVTRSEHGMTLLQKGQAPLHLPTLAQEVYDVT 260 Query: 347 AEYET 361 +T Sbjct: 261 GAGDT 265
>CARB_HALSA (Q9HP43) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1042 Score = 30.4 bits (67), Expect = 1.7 Identities = 19/56 (33%), Positives = 31/56 (55%) Frame = -2 Query: 403 ELAPELGYPGLVPIGLVLRRELVALLHEFAEVGAVQVLEDVEEAVDEKGVVLHEFV 236 ELA E+GYP LV VL + ++H+ E+ + +E+ EK V++ EF+ Sbjct: 713 ELAAEVGYPVLVRPSYVLGGRAMEIVHDDDELR--RYVEEAVRVSPEKPVLVDEFL 766
>ATPB_EUGGR (P31476) ATP synthase beta chain (EC 3.6.3.14)| Length = 480 Score = 30.0 bits (66), Expect = 2.2 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%) Frame = +2 Query: 104 DPLDLTQARARAQMA-------APSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDAL 262 DPLD T + + A S K ++R++ + + +L ++SE+D+LV A Sbjct: 355 DPLDSTSTMLQPWIVGEEHYNTAQSVKKTLQRYKELQDIIAILGLDELSEEDRLVVSRAR 414 Query: 263 LVDRFL 280 V+RFL Sbjct: 415 KVERFL 420
>Y1326_METJA (Q58722) Hypothetical GTP-binding protein MJ1326| Length = 391 Score = 30.0 bits (66), Expect = 2.2 Identities = 22/72 (30%), Positives = 35/72 (48%) Frame = -2 Query: 247 HEFVILGDLAGDEEPQLRVDRLVPLHCGLPRGRRHLGARTRLR*IKRIPSGVCAQLARIL 68 H+F I+GD+ G EE R++ + ++H+G RL+ A+LA++ Sbjct: 16 HKFNIVGDVMGIEEEIRRIEEELKKTPYNKATQKHIG---RLK----------AKLAKLR 62 Query: 67 RCVLERGGNGGG 32 RGG GGG Sbjct: 63 EQAQSRGGGGGG 74
>PUR7_METJA (Q58987) Phosphoribosylaminoimidazole-succinocarboxamide synthase| (EC 6.3.2.6) (SAICAR synthetase) Length = 242 Score = 29.6 bits (65), Expect = 2.9 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = -2 Query: 394 PELGYPGLVPIGLVLRRELVALLHEFAEVGAVQVLEDVEEAVDEKGVVLHEFVILGDLAG 215 P L V +GL R EL ++ E+ A++V E +++ DEKG++L +F I ++ Sbjct: 136 PMLNEDIAVALGLATREEL----NKIKEI-ALKVNEVLKKLFDEKGIILVDFKI--EIGK 188 Query: 214 DEEPQLRV-DRLVP 176 D E L V D + P Sbjct: 189 DREGNLLVADEISP 202
>PYRD_COREF (Q8FTC6) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 377 Score = 29.6 bits (65), Expect = 2.9 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -2 Query: 403 ELAPELGYPGLVPIGLVLRRE-LVALLHEFAEVGA 302 +LA ELG G+V + RE LV HE AE+GA Sbjct: 243 DLAVELGLAGIVATNTTISREGLVTPAHEVAEMGA 277
>ISCS_RUMFL (O54055) Cysteine desulfurase (EC 2.8.1.7) (NifS protein homolog)| Length = 396 Score = 29.3 bits (64), Expect = 3.7 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = -2 Query: 340 LVALLHEFAEVGAVQVLEDVEEAVDEKGVVLH 245 LV +++ E+G +Q +E++ EKGV+ H Sbjct: 146 LVTIMYANNEIGTIQPIEEIAAVCREKGVLFH 177
>EX5A_ECOLI (P04993) Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)| (Exodeoxyribonuclease V 67 kDa polypeptide) Length = 608 Score = 29.3 bits (64), Expect = 3.7 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +2 Query: 128 RARAQMAAPSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVDRFL 280 R R ++AAP+GKAA +S+ LR L E K + DA + R L Sbjct: 196 RCRIRLAAPTGKAAARLTESLGKALRQL--PLTDEQKKRIPEDASTLHRLL 244
>DNB2_ADE07 (P04497) Early E2A DNA-binding protein| Length = 517 Score = 29.3 bits (64), Expect = 3.7 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +3 Query: 18 SHADEPPPLPPRSSTHRRI 74 S + PPPLPP+ +T+RR+ Sbjct: 35 SPSQSPPPLPPKRNTYRRV 53
>SYI_VIBPA (Q87S90) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 942 Score = 28.9 bits (63), Expect = 4.9 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -2 Query: 370 VPIGLVLRRELVALLHEFAEVGAVQVLEDVEEAVDEKGVVLHEFVILGDLAGDEEPQ 200 VPI L + +E A LH ++++E V + V+EKG+ V +L GDE Q Sbjct: 477 VPIALFVHKE-TAELHP----NTLELIEKVAKLVEEKGIQAWWDVDAAELLGDEAEQ 528
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 28.9 bits (63), Expect = 4.9 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Frame = +2 Query: 185 SIDAQLRLLVPGKVSEDDKLVEYDALLVDRFLDIL---QDLHGPHLREFVQE 331 +ID Q+R +V E K+V+ + +++DR +D+L + + G R V+E Sbjct: 563 NIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHIVKE 614
>ATPB_STRLI (P0A301) ATP synthase beta chain (EC 3.6.3.14)| Length = 477 Score = 28.9 bits (63), Expect = 4.9 Identities = 19/63 (30%), Positives = 32/63 (50%) Frame = +2 Query: 92 DSRGDPLDLTQARARAQMAAPSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVD 271 DS LD A AA K +++++ + + +L ++ E+DKLV + A V+ Sbjct: 353 DSTSRILDPRYIAAEHYNAAMRVKNILQKYKDLQDIIAILGIDELGEEDKLVVHRARRVE 412 Query: 272 RFL 280 RFL Sbjct: 413 RFL 415
>ATPB_STRCO (P0A300) ATP synthase beta chain (EC 3.6.3.14)| Length = 477 Score = 28.9 bits (63), Expect = 4.9 Identities = 19/63 (30%), Positives = 32/63 (50%) Frame = +2 Query: 92 DSRGDPLDLTQARARAQMAAPSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDALLVD 271 DS LD A AA K +++++ + + +L ++ E+DKLV + A V+ Sbjct: 353 DSTSRILDPRYIAAEHYNAAMRVKNILQKYKDLQDIIAILGIDELGEEDKLVVHRARRVE 412 Query: 272 RFL 280 RFL Sbjct: 413 RFL 415
>ATPB_PRODI (P50003) ATP synthase beta chain (EC 3.6.3.14)| Length = 483 Score = 28.9 bits (63), Expect = 4.9 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 7/66 (10%) Frame = +2 Query: 104 DPLDLTQARARAQMA-------APSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDAL 262 DPLD T +A + A + ++ ++R++ + + +L ++SE+D+L+ A Sbjct: 356 DPLDSTSTMLQAGIVGEDHYNTARAVQSTLQRYKELQDIIAILGLDELSEEDRLIVDRAR 415 Query: 263 LVDRFL 280 V+RFL Sbjct: 416 KVERFL 421
>UL51_EHV1B (P28961) Gene 8 protein| Length = 245 Score = 28.1 bits (61), Expect = 8.3 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%) Frame = -2 Query: 340 LVALLHEFAEVGAVQVLED--VEEAV---DEKGVVLHEFVILGDLAG-DEEPQLRVDRLV 179 L AL+H + VGAV D V+ A+ E VV+ + +L G D + +R L+ Sbjct: 117 LAALMHLYLSVGAVDATTDTMVDHAIRMTAENSVVMADVAVLEKTLGLDPQATVRAQDLL 176 Query: 178 PLHCGL 161 L+ G+ Sbjct: 177 ALNSGV 182
>ATPB_NICSP (P26531) ATP synthase beta chain (EC 3.6.3.14)| Length = 498 Score = 28.1 bits (61), Expect = 8.3 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 13/92 (14%) Frame = +2 Query: 44 AATFEHAPEDPRELRA-DSRG-----DPLDLTQARARAQMA-------APSGKAAMERHQ 184 A TF H R D++G DPLD T + ++ A K ++R++ Sbjct: 340 ATTFAHLDATTVLSRGLDAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399 Query: 185 SIDAQLRLLVPGKVSEDDKLVEYDALLVDRFL 280 + + +L ++SE+D+L+ A ++RFL Sbjct: 400 ELQDIIAILGLDELSEEDRLLVARARKIERFL 431
>ATPB_RHOBL (P05440) ATP synthase beta chain (EC 3.6.3.14)| Length = 478 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%) Frame = +2 Query: 104 DPLDLTQARARAQM-------AAPSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDAL 262 DPLD T Q+ A + + ++R++S+ + +L ++SE+DKL A Sbjct: 349 DPLDSTSRLMDPQILGEEHYNTARAVQGILQRYKSLQDIIAILGMDELSEEDKLTVARAR 408 Query: 263 LVDRFL 280 + RFL Sbjct: 409 KIQRFL 414
>RS13_ERWCT (Q6CZZ2) 30S ribosomal protein S13| Length = 118 Score = 28.1 bits (61), Expect = 8.3 Identities = 24/69 (34%), Positives = 35/69 (50%) Frame = -2 Query: 349 RRELVALLHEFAEVGAVQVLEDVEEAVDEKGVVLHEFVILGDLAGDEEPQLRVDRLVPLH 170 R + + E AE V++ E EE +D+ + +FV+ GDL E L + RL+ L Sbjct: 29 RSQAICAATEIAE--NVKISELSEEQIDKLRDEVAKFVVEGDLR--REVTLSIKRLMDL- 83 Query: 169 CGLPRGRRH 143 G RG RH Sbjct: 84 -GTYRGLRH 91
>ATPB_PEA (P05037) ATP synthase beta chain (EC 3.6.3.14)| Length = 491 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 7/65 (10%) Frame = +2 Query: 104 DPLDLTQARARAQMA-------APSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDAL 262 DPLD T + ++ A K ++R++ + + +L +VSE+D+L A Sbjct: 366 DPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDMIAILGLDEVSEEDRLTVARAR 425 Query: 263 LVDRF 277 ++RF Sbjct: 426 KIERF 430
>ATPB_CHLRE (P06541) ATP synthase beta chain (EC 3.6.3.14)| Length = 480 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 7/66 (10%) Frame = +2 Query: 104 DPLDLTQARARAQM-------AAPSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDAL 262 DPL+ T + + +A S K ++R++ + + +L ++SE+D+L+ A Sbjct: 355 DPLESTSTMLQPWILGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEEDRLIVARAR 414 Query: 263 LVDRFL 280 ++RFL Sbjct: 415 KIERFL 420
>ATPB_PHYPA (P80658) ATP synthase beta chain (EC 3.6.3.14)| Length = 494 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 7/66 (10%) Frame = +2 Query: 104 DPLDLTQARARAQMA-------APSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDAL 262 DPLD T + + A K ++R++ + + +L ++SE+D+LV A Sbjct: 366 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEEDRLVVARAR 425 Query: 263 LVDRFL 280 ++RFL Sbjct: 426 KIERFL 431
>ATPB_GALSU (Q08807) ATP synthase beta chain (EC 3.6.3.14)| Length = 476 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 7/66 (10%) Frame = +2 Query: 104 DPLDLTQARARAQMA-------APSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDAL 262 DPLD T + Q+ A K ++R++ + + +L ++SE+D+L A Sbjct: 349 DPLDSTSTMLQPQIVGDEHYVTAQRVKENLQRYKELQDIIAILGLDELSEEDRLTVARAR 408 Query: 263 LVDRFL 280 ++RFL Sbjct: 409 KIERFL 414
>ATPB_CHLVU (P32978) ATP synthase beta chain (EC 3.6.3.14)| Length = 481 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 7/66 (10%) Frame = +2 Query: 104 DPLDLTQARARAQMA-------APSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDAL 262 DPLD T + + A + K ++R++ + + +L ++SE+D+L+ A Sbjct: 356 DPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDIIAILGLDELSEEDRLIVARAR 415 Query: 263 LVDRFL 280 ++RFL Sbjct: 416 KIERFL 421
>ATPB_CYAPA (P48081) ATP synthase beta chain (EC 3.6.3.14)| Length = 485 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = +2 Query: 104 DPLDLTQARARAQMA-------APSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDAL 262 DPLD T + + A K ++R++ + + +L ++SEDD+L A Sbjct: 356 DPLDSTSTMLQPGIVGEKHYACAQRVKGILQRYKELQDIISILGLDELSEDDRLAVARAR 415 Query: 263 LVDRFL 280 V+RFL Sbjct: 416 RVERFL 421
>ATPB_CHLLI (P35110) ATP synthase beta chain (EC 3.6.3.14)| Length = 462 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = +2 Query: 104 DPLDLTQARARAQM-------AAPSGKAAMERHQSIDAQLRLLVPGKVSEDDKLVEYDAL 262 DPLD T + A + K ++R++ + + +L ++S+DDKLV A Sbjct: 338 DPLDSTSRILDPNVIGDDHYDTAQAVKQILQRYKDLQDIIAILGMDELSDDDKLVVARAR 397 Query: 263 LVDRFL 280 V RFL Sbjct: 398 KVQRFL 403 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,763,915 Number of Sequences: 219361 Number of extensions: 835160 Number of successful extensions: 4017 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3901 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4014 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)