ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl18h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 4e-47
2gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome... 115 1e-22
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 115 1e-22
5gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, comple... 44 0.37
6ref|XM_630566.1| Dictyostelium discoideum hypothetical protein (... 42 1.5
7gb|AF034925.4| Leishmania major MEKK-related kinase (MRK1) gene,... 42 1.5
8gb|AC122806.4| Mus musculus BAC clone RP23-297C11 from 8, comple... 42 1.5
9gb|AC171181.3| Pan troglodytes BAC clone CH251-214F24 from chrom... 42 1.5
10gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 42 1.5
11emb|AL353648.27| Human DNA sequence from clone RP11-550P23 on ch... 42 1.5
12gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, comple... 42 1.5
13gb|AC091959.3| Homo sapiens chromosome 5 clone RP11-449H3, compl... 42 1.5
14gb|AC107882.3| Homo sapiens chromosome 11, clone CTD-2019O4, com... 42 1.5
15gb|AC107886.2| Homo sapiens chromosome 11, clone CTD-3064C13, co... 42 1.5
16gb|AF012100.2|AF012100 Pseudomonas aeruginosa PtxR (ptxR) and Pt... 42 1.5
17gb|AE004651.1| Pseudomonas aeruginosa PAO1, section 212 of 529 o... 42 1.5
18gb|AC091887.3| Homo sapiens chromosome 5 clone RP11-118M9, compl... 42 1.5
19gb|AC154327.2| Mus musculus BAC clone RP23-289N10 from 14, compl... 42 1.5
20gb|AF002222.1|AF002222 Pseudomonas aeruginosa pyoverdine chromop... 42 1.5
21gb|AC140462.3| Mus musculus BAC clone RP23-13K8 from 14, complet... 42 1.5
22emb|CR974443.6| M.truncatula DNA sequence from clone MTH2-35O18 ... 42 1.5
23gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosom... 40 5.8
24gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genom... 40 5.8
25gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, com... 40 5.8
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.8
27gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome... 40 5.8
28gb|AC131113.4| Mus musculus BAC clone RP24-155C13 from chromosom... 40 5.8
29gb|DQ334060.1| Drosophila miranda CG10732 gene, partial cds 40 5.8
30emb|AJ544897.1|TNI544897 Tetraodon nigroviridis tf2 gene for tis... 40 5.8
31gb|BC035098.1| Homo sapiens cDNA clone IMAGE:5261953 40 5.8
32gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence 40 5.8
33gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complet... 40 5.8
34emb|BX323560.16| Zebrafish DNA sequence from clone DKEY-265E15 i... 40 5.8
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
36emb|AL596139.1|CNS07EGR BAC A of library A from Tetraodon nigrov... 40 5.8
37gb|AC154260.2| Mus musculus BAC clone RP24-225C5 from 17, comple... 40 5.8
38gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 5.8
39gb|AF037030.1|AF037030 Zea mays 6-phosphogluconate dehydrogenase... 40 5.8
40emb|AJ628955.2| Streptomyces rimosus subsp. paromomycinus genomi... 40 5.8
41emb|AL645987.7| Mouse DNA sequence from clone RP23-27B20 on chro... 40 5.8
42emb|X87512.1|HSNL197D H.sapiens genomic DNA (chromosome 3; clone... 40 5.8 
>dbj|AK106730.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H09, full
           insert sequence
          Length = 1999

 Score =  196 bits (99), Expect = 4e-47
 Identities = 287/350 (82%)
 Strand = Plus / Plus

                                                                       
Query: 83  ccggagcttcccgcggaggaggagatggcgctcatccgagatatcaccgccgcggcggag 142
           |||||| | |||||||||||||||| |||||| ||||| || ||||||| ||| || |||
Sbjct: 288 ccggaggtgcccgcggaggaggagagggcgctgatccgggacatcaccgtcgccgccgag 347

                                                                       
Query: 143 gcccacgccaaggagggtgacattttcttcctcatcacaaacaggtggtggcagagttgg 202
           |||||||||||||| || ||||  ||||||||||||||  ||||||||||||| ||||||
Sbjct: 348 gcccacgccaaggaaggggacaccttcttcctcatcacccacaggtggtggcaaagttgg 407

                                                                       
Query: 203 attgattatgttattcaggattcggctggtgtaccaagtaatggttctcatcatcatgaa 262
           ||||||||||| ||||| |||| ||||  |  | | | ||||||||||||||||||||| 
Sbjct: 408 attgattatgtcattcaagatttggctaattcaacgaataatggttctcatcatcatgag 467

                                                                       
Query: 263 ttcggttcaaatactcctagaaggccaggagctattgacaatacaaatttgttggatgac 322
              ||||| ||   ||  ||||| |||||||| |||||||||||| ||||| | ||||| 
Sbjct: 468 catggttctaacgttctgagaagaccaggagcaattgacaatacagatttgatagatgat 527

                                                                       
Query: 323 atggcatctgaagtctccgacatgcagattgagctacatgataccttggctgaaggccgt 382
           |  ||||||||||||||  | ||| ||||||| ||||||||||| |||| ||| || |||
Sbjct: 528 actgcatctgaagtctcgaatatggagattgaactacatgatacattggttgagggtcgt 587

                                                             
Query: 383 gattatatattgctccctcagncagtctgggaaaagctgcatagttggta 432
           || |||||| |||| || ||   ||||||||||||| ||||  |||||||
Sbjct: 588 gactatatactgcttccccaacaagtctgggaaaagttgcacggttggta 637
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>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09,
              complete sequence
          Length = 171861

 Score =  115 bits (58), Expect = 1e-22
 Identities = 204/253 (80%)
 Strand = Plus / Plus

                                                                          
Query: 180    caaacaggtggtggcagagttggattgattatgttattcaggattcggctggtgtaccaa 239
              |||| ||||||||||| ||||||||||||||||| ||||| |||| ||||  |  | | |
Sbjct: 144509 caaataggtggtggcaaagttggattgattatgtcattcaagatttggctaattcaacga 144568

                                                                          
Query: 240    gtaatggttctcatcatcatgaattcggttcaaatactcctagaaggccaggagctattg 299
               |||||||||||||||||||||    ||||| ||   ||  ||||| |||||||| ||||
Sbjct: 144569 ataatggttctcatcatcatgagcatggttctaacgttctgagaagaccaggagcaattg 144628

                                                                          
Query: 300    acaatacaaatttgttggatgacatggcatctgaagtctccgacatgcagattgagctac 359
              |||||||| ||||| | ||||| |  ||||||||||||||  | ||| ||||||| ||||
Sbjct: 144629 acaatacagatttgatagatgatactgcatctgaagtctcgaatatggagattgaactac 144688

                                                                          
Query: 360    atgataccttggctgaaggccgtgattatatattgctccctcagncagtctgggaaaagc 419
              ||||||| |||| ||| || ||||| |||||| |||| || ||   ||||||||||||| 
Sbjct: 144689 atgatacattggttgagggtcgtgactatatactgcttccccaacaagtctgggaaaagt 144748

                           
Query: 420    tgcatagttggta 432
              ||||  |||||||
Sbjct: 144749 tgcacggttggta 144761



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                          
Query: 83     ccggagcttcccgcggaggaggagatggcgctcatccgagatatcaccgccgcggcggag 142
              |||||| | |||||||||||||||| |||||| ||||| || ||||||| ||| || |||
Sbjct: 143225 ccggaggtgcccgcggaggaggagagggcgctgatccgggacatcaccgtcgccgccgag 143284

                                                    
Query: 143    gcccacgccaaggagggtgacattttcttcctcatcac 180
              |||||||||||||| || ||||  ||||||||||||||
Sbjct: 143285 gcccacgccaaggaaggggacaccttcttcctcatcac 143322
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  115 bits (58), Expect = 1e-22
 Identities = 204/253 (80%)
 Strand = Plus / Plus

                                                                            
Query: 180      caaacaggtggtggcagagttggattgattatgttattcaggattcggctggtgtaccaa 239
                |||| ||||||||||| ||||||||||||||||| ||||| |||| ||||  |  | | |
Sbjct: 15734828 caaataggtggtggcaaagttggattgattatgtcattcaagatttggctaattcaacga 15734887

                                                                            
Query: 240      gtaatggttctcatcatcatgaattcggttcaaatactcctagaaggccaggagctattg 299
                 |||||||||||||||||||||    ||||| ||   ||  ||||| |||||||| ||||
Sbjct: 15734888 ataatggttctcatcatcatgagcatggttctaacgttctgagaagaccaggagcaattg 15734947

                                                                            
Query: 300      acaatacaaatttgttggatgacatggcatctgaagtctccgacatgcagattgagctac 359
                |||||||| ||||| | ||||| |  ||||||||||||||  | ||| ||||||| ||||
Sbjct: 15734948 acaatacagatttgatagatgatactgcatctgaagtctcgaatatggagattgaactac 15735007

                                                                            
Query: 360      atgataccttggctgaaggccgtgattatatattgctccctcagncagtctgggaaaagc 419
                ||||||| |||| ||| || ||||| |||||| |||| || ||   ||||||||||||| 
Sbjct: 15735008 atgatacattggttgagggtcgtgactatatactgcttccccaacaagtctgggaaaagt 15735067

                             
Query: 420      tgcatagttggta 432
                ||||  |||||||
Sbjct: 15735068 tgcacggttggta 15735080



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                            
Query: 83       ccggagcttcccgcggaggaggagatggcgctcatccgagatatcaccgccgcggcggag 142
                |||||| | |||||||||||||||| |||||| ||||| || ||||||| ||| || |||
Sbjct: 15733544 ccggaggtgcccgcggaggaggagagggcgctgatccgggacatcaccgtcgccgccgag 15733603

                                                      
Query: 143      gcccacgccaaggagggtgacattttcttcctcatcac 180
                |||||||||||||| || ||||  ||||||||||||||
Sbjct: 15733604 gcccacgccaaggaaggggacaccttcttcctcatcac 15733641
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  115 bits (58), Expect = 1e-22
 Identities = 204/253 (80%)
 Strand = Plus / Plus

                                                                            
Query: 180      caaacaggtggtggcagagttggattgattatgttattcaggattcggctggtgtaccaa 239
                |||| ||||||||||| ||||||||||||||||| ||||| |||| ||||  |  | | |
Sbjct: 15822205 caaataggtggtggcaaagttggattgattatgtcattcaagatttggctaattcaacga 15822264

                                                                            
Query: 240      gtaatggttctcatcatcatgaattcggttcaaatactcctagaaggccaggagctattg 299
                 |||||||||||||||||||||    ||||| ||   ||  ||||| |||||||| ||||
Sbjct: 15822265 ataatggttctcatcatcatgagcatggttctaacgttctgagaagaccaggagcaattg 15822324

                                                                            
Query: 300      acaatacaaatttgttggatgacatggcatctgaagtctccgacatgcagattgagctac 359
                |||||||| ||||| | ||||| |  ||||||||||||||  | ||| ||||||| ||||
Sbjct: 15822325 acaatacagatttgatagatgatactgcatctgaagtctcgaatatggagattgaactac 15822384

                                                                            
Query: 360      atgataccttggctgaaggccgtgattatatattgctccctcagncagtctgggaaaagc 419
                ||||||| |||| ||| || ||||| |||||| |||| || ||   ||||||||||||| 
Sbjct: 15822385 atgatacattggttgagggtcgtgactatatactgcttccccaacaagtctgggaaaagt 15822444

                             
Query: 420      tgcatagttggta 432
                ||||  |||||||
Sbjct: 15822445 tgcacggttggta 15822457



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                            
Query: 83       ccggagcttcccgcggaggaggagatggcgctcatccgagatatcaccgccgcggcggag 142
                |||||| | |||||||||||||||| |||||| ||||| || ||||||| ||| || |||
Sbjct: 15820921 ccggaggtgcccgcggaggaggagagggcgctgatccgggacatcaccgtcgccgccgag 15820980

                                                      
Query: 143      gcccacgccaaggagggtgacattttcttcctcatcac 180
                |||||||||||||| || ||||  ||||||||||||||
Sbjct: 15820981 gcccacgccaaggaaggggacaccttcttcctcatcac 15821018
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>gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, complete sequence
          Length = 199487

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 11    aacccaaccctaaccctagccc 32
             ||||||||||||||||||||||
Sbjct: 84015 aacccaaccctaaccctagccc 83994



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 11    aacccaaccctaaccctagccc 32
             ||||||||||||||||||||||
Sbjct: 83814 aacccaaccctaaccctagccc 83793



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 11    aacccaaccctaaccctagccc 32
             ||||||||||||||||||||||
Sbjct: 83710 aacccaaccctaaccctagccc 83689
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>ref|XM_630566.1| Dictyostelium discoideum hypothetical protein (DDB0188963), partial
           mRNA
          Length = 2154

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 caagtaatggttctcatcatc 257
           |||||||||||||||||||||
Sbjct: 113 caagtaatggttctcatcatc 133
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>gb|AF034925.4| Leishmania major MEKK-related kinase (MRK1) gene, complete cds
          Length = 4289

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 92   cccgcggaggaggagatggcg 112
            |||||||||||||||||||||
Sbjct: 2774 cccgcggaggaggagatggcg 2794
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>gb|AC122806.4| Mus musculus BAC clone RP23-297C11 from 8, complete sequence
          Length = 184206

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   tgacattttcttcctcatcac 180
             |||||||||||||||||||||
Sbjct: 73756 tgacattttcttcctcatcac 73776
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>gb|AC171181.3| Pan troglodytes BAC clone CH251-214F24 from chromosome unknown,
             complete sequence
          Length = 165414

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 407   gtctgggaaaagctgcatagttggt 431
             |||||||||||||||||||| ||||
Sbjct: 97525 gtctgggaaaagctgcataggtggt 97549
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 36     gctcctcgccggcgtcggcga 56
              |||||||||||||||||||||
Sbjct: 180906 gctcctcgccggcgtcggcga 180926
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>emb|AL353648.27| Human DNA sequence from clone RP11-550P23 on chromosome 13 Contains the
             HMGB1 gene for high mobility group box 1 (HMG1 HMG3), a
             novel gene, a novel pseudogene, a
             microfibrillar-associated protein 1 (MFAP1) pseudogene, a
             protein tyrosine phosphatase, non-receptor type 2 (PTPN2)
             pseudogene and a CpG island, complete sequence
          Length = 133867

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 407   gtctgggaaaagctgcatagttggt 431
             |||||||||||||||||||| ||||
Sbjct: 74731 gtctgggaaaagctgcataggtggt 74755
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>gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, complete sequence
          Length = 219357

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 11    aacccaaccctaaccctagcccaga 35
             ||||||||||||||||||| |||||
Sbjct: 96761 aacccaaccctaaccctagaccaga 96785
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>gb|AC091959.3| Homo sapiens chromosome 5 clone RP11-449H3, complete sequence
          Length = 155839

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 301   caatacaaatttgttggatga 321
             |||||||||||||||||||||
Sbjct: 98082 caatacaaatttgttggatga 98062
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>gb|AC107882.3| Homo sapiens chromosome 11, clone CTD-2019O4, complete sequence
          Length = 130916

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 237   caagtaatggttctcatcatcatga 261
             ||||||| |||||||||||||||||
Sbjct: 56316 caagtaaaggttctcatcatcatga 56340
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>gb|AC107886.2| Homo sapiens chromosome 11, clone CTD-3064C13, complete sequence
          Length = 133892

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 237   caagtaatggttctcatcatcatga 261
             ||||||| |||||||||||||||||
Sbjct: 14763 caagtaaaggttctcatcatcatga 14739
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>gb|AF012100.2|AF012100 Pseudomonas aeruginosa PtxR (ptxR) and PtxS (ptxS) genes, complete
            cds and ketogluconate utilization operon gene, complete
            sequence
          Length = 7447

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 126  tcaccgccgcggcggaggccc 146
            |||||||||||||||||||||
Sbjct: 1503 tcaccgccgcggcggaggccc 1483
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>gb|AE004651.1| Pseudomonas aeruginosa PAO1, section 212 of 529 of the complete
            genome
          Length = 10728

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 126  tcaccgccgcggcggaggccc 146
            |||||||||||||||||||||
Sbjct: 8996 tcaccgccgcggcggaggccc 8976
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>gb|AC091887.3| Homo sapiens chromosome 5 clone RP11-118M9, complete sequence
          Length = 171095

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 301    caatacaaatttgttggatga 321
              |||||||||||||||||||||
Sbjct: 169433 caatacaaatttgttggatga 169453
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>gb|AC154327.2| Mus musculus BAC clone RP23-289N10 from 14, complete sequence
          Length = 161835

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 171   tcctcatcacaaacaggtggtggca 195
             ||||||||| |||||||||||||||
Sbjct: 44042 tcctcatcagaaacaggtggtggca 44018
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>gb|AF002222.1|AF002222 Pseudomonas aeruginosa pyoverdine chromophore biosynthesis gene
            cluster including PvcA (pvcA), PvcB (pvcB), PvcC (pvcC),
            and PvcD (pvcD) genes, complete cds, and transcriptional
            activator PtxR (ptxR) gene, complete cds
          Length = 6397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 126  tcaccgccgcggcggaggccc 146
            |||||||||||||||||||||
Sbjct: 5978 tcaccgccgcggcggaggccc 5958
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>gb|AC140462.3| Mus musculus BAC clone RP23-13K8 from 14, complete sequence
          Length = 199933

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 171  tcctcatcacaaacaggtggtggca 195
            ||||||||| |||||||||||||||
Sbjct: 3049 tcctcatcagaaacaggtggtggca 3073
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>emb|CR974443.6| M.truncatula DNA sequence from clone MTH2-35O18 on chromosome 3, complete
              sequence
          Length = 115456

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 295    tattgacaatacaaatttgtt 315
              |||||||||||||||||||||
Sbjct: 100769 tattgacaatacaaatttgtt 100749
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>gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosome 17, complete sequence
          Length = 211631

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    ggccaggagctattgacaat 304
              ||||||||||||||||||||
Sbjct: 169806 ggccaggagctattgacaat 169787
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>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete
             sequence
          Length = 121849

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    cccaaccctaaccctagccc 32
             ||||||||||||||||||||
Sbjct: 61868 cccaaccctaaccctagccc 61849
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>gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, complete sequence
          Length = 191038

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    cccaaccctaaccctagccc 32
             ||||||||||||||||||||
Sbjct: 37878 cccaaccctaaccctagccc 37897
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 13       cccaaccctaaccctagccc 32
                ||||||||||||||||||||
Sbjct: 27117023 cccaaccctaaccctagccc 27117042
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>gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome 3, complete sequence
          Length = 214712

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    cccaaccctaaccctagccc 32
             ||||||||||||||||||||
Sbjct: 11753 cccaaccctaaccctagccc 11734
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>gb|AC131113.4| Mus musculus BAC clone RP24-155C13 from chromosome 3, complete sequence
          Length = 173268

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    cccaaccctaaccctagccc 32
             ||||||||||||||||||||
Sbjct: 26745 cccaaccctaaccctagccc 26764
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>gb|DQ334060.1| Drosophila miranda CG10732 gene, partial cds
          Length = 1125

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 68  gagtcggagccggcaccgga 87
           ||||||||||||||||||||
Sbjct: 298 gagtcggagccggcaccgga 279
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>emb|AJ544897.1|TNI544897 Tetraodon nigroviridis tf2 gene for tissue factor 2, exons 1-7
          Length = 8747

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   cccaaccctaaccctagccc 32
            ||||||||||||||||||||
Sbjct: 5666 cccaaccctaaccctagccc 5647



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   cccaaccctaaccctagccc 32
            ||||||||||||||||||||
Sbjct: 5439 cccaaccctaaccctagccc 5458



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   cccaaccctaaccctagccc 32
            ||||||||||||||||||||
Sbjct: 5343 cccaaccctaaccctagccc 5324
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>gb|BC035098.1| Homo sapiens cDNA clone IMAGE:5261953
          Length = 2257

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   cccaaccctaaccctagccc 32
            ||||||||||||||||||||
Sbjct: 1468 cccaaccctaaccctagccc 1487
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>gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence
          Length = 185590

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    cccaaccctaaccctagccc 32
             ||||||||||||||||||||
Sbjct: 89578 cccaaccctaaccctagccc 89559
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>gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complete sequence
          Length = 79804

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    cccaaccctaaccctagccc 32
             ||||||||||||||||||||
Sbjct: 39172 cccaaccctaaccctagccc 39191
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>emb|BX323560.16| Zebrafish DNA sequence from clone DKEY-265E15 in linkage group 4,
             complete sequence
          Length = 190574

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   catgaattcggttcaaatac 276
             ||||||||||||||||||||
Sbjct: 33292 catgaattcggttcaaatac 33311
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 13       cccaaccctaaccctagccc 32
                ||||||||||||||||||||
Sbjct: 27208346 cccaaccctaaccctagccc 27208365
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>emb|AL596139.1|CNS07EGR BAC A of library A from Tetraodon nigroviridis, T-cell receptor alpha
             delta locus (germline)
          Length = 74861

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    cccaaccctaaccctagccc 32
             ||||||||||||||||||||
Sbjct: 26596 cccaaccctaaccctagccc 26615
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>gb|AC154260.2| Mus musculus BAC clone RP24-225C5 from 17, complete sequence
          Length = 187652

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    ggccaggagctattgacaat 304
              ||||||||||||||||||||
Sbjct: 166304 ggccaggagctattgacaat 166323
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      agctcctcgccggcgtcggc 54
               ||||||||||||||||||||
Sbjct: 2479242 agctcctcgccggcgtcggc 2479261
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>gb|AF037030.1|AF037030 Zea mays 6-phosphogluconate dehydrogenase isoenzyme B mRNA, partial
           cds
          Length = 634

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  ggaggaggagatggcgctca 116
           ||||||||||||||||||||
Sbjct: 90  ggaggaggagatggcgctca 109
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>emb|AJ628955.2| Streptomyces rimosus subsp. paromomycinus genomic region of the
             paromomycin biosynthesis gene cluster, strain NRRL 2455
          Length = 48169

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ctcgccggcgtcggcgatgg 59
             ||||||||||||||||||||
Sbjct: 45520 ctcgccggcgtcggcgatgg 45501
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>emb|AL645987.7| Mouse DNA sequence from clone RP23-27B20 on chromosome 11 Contains a
             eukaryotic translation initiation factor 3, subunit 2
             (beta) (Eif3s2) pseudogene, a novel protein (MOR256-1)
             similar to the olfactory receptor family and a novel
             protein (MOR256-28) similar to the olfactory receptor
             family, complete sequence
          Length = 99868

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    cccaaccctaaccctagccc 32
             ||||||||||||||||||||
Sbjct: 62767 cccaaccctaaccctagccc 62748
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>emb|X87512.1|HSNL197D H.sapiens genomic DNA (chromosome 3; clone NL197D)
          Length = 327

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 gccgcggcggaggcccacgc 150
           ||||||||||||||||||||
Sbjct: 4   gccgcggcggaggcccacgc 23


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,867,770
Number of Sequences: 3902068
Number of extensions: 3867770
Number of successful extensions: 81132
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80684
Number of HSP's gapped (non-prelim): 448
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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