Clone Name | bastl18g10 |
---|---|
Clone Library Name | barley_pub |
>gb|BC056585.1| Danio rerio wu:fl05f04, mRNA (cDNA clone IMAGE:6793027), partial cds Length = 1704 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 accctcacacccgtcctctt 105 |||||||||||||||||||| Sbjct: 1124 accctcacacccgtcctctt 1143
>emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chromosome 10 Contains the 5' end of a novel gene, complete sequence Length = 152898 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tgaagagatggggaagaaca 266 |||||||||||||||||||| Sbjct: 89539 tgaagagatggggaagaaca 89558
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ggccgccattggcgccgtcc 238 |||||||||||||||||||| Sbjct: 1161428 ggccgccattggcgccgtcc 1161409
>ref|XM_695218.1| PREDICTED: Danio rerio similar to Wu:fl05f04 protein (LOC571612), mRNA Length = 1836 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 accctcacacccgtcctctt 105 |||||||||||||||||||| Sbjct: 1309 accctcacacccgtcctctt 1328
>emb|BX323602.7| Zebrafish DNA sequence from clone RP71-61H23, complete sequence Length = 156514 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 accctcacacccgtcctctt 105 |||||||||||||||||||| Sbjct: 111429 accctcacacccgtcctctt 111410
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 ccgcccgtggccgccattggcgcc 234 ||||||||||||||||||| |||| Sbjct: 17040387 ccgcccgtggccgccattgtcgcc 17040364
>dbj|AP004723.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1126_G08 Length = 157455 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 ccgcccgtggccgccattggcgcc 234 ||||||||||||||||||| |||| Sbjct: 37336 ccgcccgtggccgccattgtcgcc 37313
>gb|AC104898.9| Mus musculus chromosome 8, clone RP23-300I4, complete sequence Length = 181370 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tgaagagatggggaagaaca 266 |||||||||||||||||||| Sbjct: 86298 tgaagagatggggaagaaca 86317
>emb|AL805938.4| Mouse DNA sequence from clone RP23-248L9 on chromosome X, complete sequence Length = 81921 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gaagagatggggaagaacac 267 |||||||||||||||||||| Sbjct: 22065 gaagagatggggaagaacac 22046 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,053,872 Number of Sequences: 3902068 Number of extensions: 1053872 Number of successful extensions: 20819 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 20763 Number of HSP's gapped (non-prelim): 56 length of query: 288 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 266 effective length of database: 17,147,199,772 effective search space: 4561155139352 effective search space used: 4561155139352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)